mRNA_P-wetherbeei_contig55196.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig55196.1.1 vs. uniprot
Match: UPI001C3D6C4A (D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3D6C4A) HSP 1 Score: 219 bits (559), Expect = 1.800e-67 Identity = 122/171 (71.35%), Postives = 139/171 (81.29%), Query Frame = 1
Query: 1 SPPLPVILRAMNLASDNFIAETLAKDVGAYGSGVGTTAAGVARTRALLTDRGIVQPSDRLVDGSGLSRANRVAAASMVRLIAAADADPTWGAALISSLAQGGQGTLIHRFLTGPATRRVRAKTGYLNGVSAMAGRVVSRGGHHYAFALIMNSSDILGARATQDRVVTLLAA 513
SP L I+R MNL SDN IAETL K +GA+G+G GTTAAG AR R L RGI+ P DRLVDGSGLSRANR++AA++VRLIAAADAD WG L+ SLA+GG+GTL+ RF +GPAT+RVRAKTGYL+ VSAMAGRVVSR G YAFAL+ NS DI GARA QDRVVTLLAA
Sbjct: 219 SPRLRAIVRQMNLESDNTIAETLMKGIGAHGAGRGTTAAGAARIREHLERRGILGPGDRLVDGSGLSRANRLSAATLVRLIAAADADRAWGGPLVHSLARGGEGTLVRRFTSGPATKRVRAKTGYLDCVSAMAGRVVSRRGQRYAFALVANSCDIWGARAAQDRVVTLLAA 389
BLAST of mRNA_P-wetherbeei_contig55196.1.1 vs. uniprot
Match: UPI001C3E8159 (D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3E8159) HSP 1 Score: 215 bits (547), Expect = 8.540e-66 Identity = 118/170 (69.41%), Postives = 137/170 (80.59%), Query Frame = 1
Query: 1 SPPLPVILRAMNLASDNFIAETLAKDVGAYGSGVGTTAAGVARTRALLTDRGIVQPSDRLVDGSGLSRANRVAAASMVRLIAAADADPTWGAALISSLAQGGQGTLIHRFLTGPATRRVRAKTGYLNGVSAMAGRVVSRGGHHYAFALIMNSSDILGARATQDRVVTLLA 510
SPPL I+R MNLASDNFIAETL K VGA G AAG ARTR LL RG++ P DRLVDGSGLSRANR++A ++V ++AAAD D TWGAALISSLA+GG+GTLI RF TG AT+RVRAKTGYL+GVS+MAGRVVSRGG YAFA+ N++DI ARA Q+RVV +LA
Sbjct: 219 SPPLRTIVRTMNLASDNFIAETLVKGVGAAGXXXXXXAAGTARTRELLESRGMLAPGDRLVDGSGLSRANRLSARTLVGVVAAADDDDTWGAALISSLARGGEGTLIRRFTTGVATKRVRAKTGYLDGVSSMAGRVVSRGGQRYAFAVEANTADIAAARAVQERVVVMLA 388
BLAST of mRNA_P-wetherbeei_contig55196.1.1 vs. uniprot
Match: A0A1H6FM16_THEAL (D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (Penicillin-binding protein 4) n=2 Tax=Thermoleophilum album TaxID=29539 RepID=A0A1H6FM16_THEAL) HSP 1 Score: 114 bits (286), Expect = 8.430e-27 Identity = 80/171 (46.78%), Postives = 104/171 (60.82%), Query Frame = 1
Query: 1 SPPLPVILRAMNLASDNFIAETLAKDVGAYGSGVGTTAAGVARTRALLTDRGIVQPSDRLVDGSGLSRANRVAAASMVRLIAAADADPTWGAALISSLAQGG-QGTLIHRFLTGPATRRVRAKTGYLNGVSAMAGRVVSRGGHHYAFALIMNSSDILGARATQDRVVTLLA 510
SPPL +I+R N SDNF AE L K + + G+T G+ RA+L G VQP +LVDGSGLSRANR + + +VRL+ A P WG + SL G +GTL RF +GPA R RAKTG L GV+A++G +R G Y F+L+ N + ARAT++ VV LA
Sbjct: 312 SPPLSLIVRVTNRDSDNFFAEMLLKQLATRAATPGSTELGLRIERAVLQRLG-VQP--KLVDGSGLSRANRASPSEIVRLLRNALRRP-WGPQWLRSLPLAGREGTLRRRFRSGPARGRCRAKTGTLTGVTALSGYCRARSGERYWFSLLANGTPTARARATEEAVVQALA 478
BLAST of mRNA_P-wetherbeei_contig55196.1.1 vs. uniprot
Match: A0A7V9EZG0_9ACTN (D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Thermoleophilaceae bacterium TaxID=2732252 RepID=A0A7V9EZG0_9ACTN) HSP 1 Score: 103 bits (256), Expect = 9.220e-23 Identity = 73/171 (42.69%), Postives = 96/171 (56.14%), Query Frame = 1
Query: 1 SPPLPVILRAMNLASDNFIAETLAKDVGAYGSGVGTTAAGVARTRALLTDRGIVQPSDRLVDGSGLSRANRVAAASMVRLIAAADADPTWGAALISSLAQGGQ-GTLIHRFLTGPATRRVRAKTGYLNGVSAMAGRVVSRGGHHYAFALIMNSSDILGARATQDRVVTLLA 510
SP + + N +SDNF+AETL KD+ G GTT G AR A R + RLVDGSGLSR NR + ++ RL+ A A SL+ G+ GTL R GPA R R KTG L+GVSA++G +R G Y F+++MN + GARA QDR++ +A
Sbjct: 258 SPSMARLAALTNKSSDNFLAETLMKDLAMQADGRGTTTGG-ARIAAAFASR--LGGRARLVDGSGLSRGNRASPFAVARLLMALRGRQDEFPAFFDSLSIAGRDGTLGPRMRRGPARNRCRGKTGTLSGVSAVSGYCKARSGDTYVFSILMNGVNPFGARALQDRMLQAIA 425
BLAST of mRNA_P-wetherbeei_contig55196.1.1 vs. uniprot
Match: A0A537Z3R5_9ACTN (D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A537Z3R5_9ACTN) HSP 1 Score: 101 bits (252), Expect = 3.070e-22 Identity = 73/174 (41.95%), Postives = 97/174 (55.75%), Query Frame = 1
Query: 1 SPPLPVILRAMNLASDNFIAETLAKDVGAYGSGVGTTAAGVARTRALLTDRGIVQPSDRLVDGSGLSRANRVAAASMVRLIAAADADPTWGAALISSLAQGG-QGTLIHRFLTGPATRRVRAKTGYLNGVSAMAGRVVSRGGHHYAFALIMNSSDIL--GARATQDRVVTLLAA 513
SPPL ++R M+ SDNF AE L K +GA GT+AAG A +LT+ G+ R+VDGSGLSR +R+ A ++ L+ A DPT L+++L G GTL R GPA V AKTG + SA++G V R Y FA++ N + AR QDR +LAA
Sbjct: 249 SPPLSAVVRFMDRESDNFTAEMLLKQLGAIELERGTSAAGAAVVSRVLTEAGVPMTGVRIVDGSGLSRLDRLTANALTALLHVAWTDPTIKPVLLAALPVAGVSGTLADRMRRGPARGHVAAKTGTTSDASALSGFVRDR----YVFAVVQNGHPLSYWWARVAQDRFPQVLAA 418
BLAST of mRNA_P-wetherbeei_contig55196.1.1 vs. uniprot
Match: A0A7V9M8M2_9ACTN (D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9M8M2_9ACTN) HSP 1 Score: 100 bits (249), Expect = 7.040e-22 Identity = 74/171 (43.27%), Postives = 94/171 (54.97%), Query Frame = 1
Query: 7 PLPVILRAMNLASDNFIAETLAKDVGAYGSGVGTTAAGVARTRALLTDRGIVQPSDRLVDGSGLSRANRVAAASMVRLIAAADADPTWGAALISSLAQGGQ-GTLIHRFLTGPATRRVRAKTGYLNGVSAMAGRVVSRGGHHYAFALIMNSSDI--LGARATQDRVVTLLA 510
PL +LR MN SDNF AE L K +G + GTT AG A R +L ++ I R+VDGSGLSR NR+ A++V ++ ADP L+S+L G+ GTL R PA RV AKTG SA++G V R Y FA++ N S I AR QDR +LA
Sbjct: 234 PLLHVLRFMNRESDNFTAEVLLKQLGTQLTDQGTTFAGSAVVRQILAEQEIPLGGVRIVDGSGLSRLNRLTPATLVAMLQKGYADPLLREVLLSALPVAGRTGTLRRRMRGSPAAGRVMAKTGTTREASALSGYVKRR----YVFAILQNGSPISAYSARRAQDRFAAVLA 400
BLAST of mRNA_P-wetherbeei_contig55196.1.1 vs. uniprot
Match: A0A538E7U2_9ACTN (D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538E7U2_9ACTN) HSP 1 Score: 100 bits (248), Expect = 9.750e-22 Identity = 74/174 (42.53%), Postives = 98/174 (56.32%), Query Frame = 1
Query: 1 SPPLPVILRAMNLASDNFIAETLAKDVGAYGSGVGTTAAGVARTRALLTDRGIVQPSDRLVDGSGLSRANRVAAASMVRLIAAADADPTWGAALISSLAQGG-QGTLIHRFLTGPATRRVRAKTGYLNGVSAMAGRVVSRGGHHYAFALIMNSSDIL--GARATQDRVVTLLAA 513
SPPL I+R M+ SDNF AE L K +GA GT+AAG + +LT+ GI R+VDGSGLSR +R+ A ++ L+ A DP L+++L G GTL R GPA V AKTG N SA++G V +R +AFA++ N + AR QDR +LAA
Sbjct: 233 SPPLSSIVRFMDRESDNFTAEMLLKQLGAIELDHGTSAAGSSVVSRVLTEAGIPMTGVRIVDGSGLSRFDRLTAGALTTLLREAWTDPVIKPVLLAALPVAGVSGTLQDRMRRGPAHGNVAAKTGTTNDASALSGFVRNR----FAFAVVQNGHPLSYWWARIAQDRFAQVLAA 402
BLAST of mRNA_P-wetherbeei_contig55196.1.1 vs. uniprot
Match: A0A2T4UBU9_9ACTN (D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Conexibacter sp. Seoho-28 TaxID=2133960 RepID=A0A2T4UBU9_9ACTN) HSP 1 Score: 94.7 bits (234), Expect = 3.780e-21 Identity = 71/175 (40.57%), Postives = 92/175 (52.57%), Query Frame = 1
Query: 1 SPPLPVILRAMNLASDNFIAETLAKDVGAYGSGVGTTAAGVARTRALLTDRGIVQPSDRLVDGSGLSRANRVAAASMVRLIAAADADPT-----WGAALISSLAQGGQGTLIHRFLTGPATRRVRAKTGYLNGVSAMAGRVVSRGGHHYAFALIMNSSDILGARATQDRVVTLLA 510
SPP+ + N SDNF AE L K +GA GTTAAG+A R L RGI +VDGSGLSRA++ + +V L+ A D P W +L G GTL R A R AKTG L GVSA++G + GG F+L+ N+ D L A+ +DR+V +A
Sbjct: 23 SPPMAQLAATTNQPSDNFYAEMLVKGLGARFGTAGTTAAGIAVMRTTL--RGIGVRPTAMVDGSGLSRADKASPRQLVTLLQAMDRQPADVRTAWRTSLPVI---GRSGTLAGRMRGTAAEGRCSAKTGTLRGVSALSGFCTTTGGRSVYFSLLENAVDALAAKRIEDRMVPKIA 192
BLAST of mRNA_P-wetherbeei_contig55196.1.1 vs. uniprot
Match: A0A6N7YNW8_9ACTN (D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Conexibacter sp. W3-3-2 TaxID=2675227 RepID=A0A6N7YNW8_9ACTN) HSP 1 Score: 97.4 bits (241), Expect = 1.000e-20 Identity = 72/175 (41.14%), Postives = 93/175 (53.14%), Query Frame = 1
Query: 1 SPPLPVILRAMNLASDNFIAETLAKDVGAYGSGVGTTAAGVARTRALLTDRGIVQPSDRLVDGSGLSRANRVAAASMVRLIAAADADPT-----WGAALISSLAQGGQGTLIHRFLTGPATRRVRAKTGYLNGVSAMAGRVVSRGGHHYAFALIMNSSDILGARATQDRVVTLLA 510
SPP+ + N SDNF AE L K +GA GTTAAG+A R L RGI +VDGSGLSRA++ + +V L+ A D PT W +L G GTL R A R AKTG L GVSA++G + GG F+L+ N+ D L A+ +DR+V +A
Sbjct: 237 SPPMAQLAATTNQPSDNFYAEMLVKGLGARFGSAGTTAAGIAVMRTTL--RGIGVRPTAMVDGSGLSRADKASPRQLVTLLQAMDRQPTDVRTAWRTSLPVI---GRSGTLAGRMRGTAAEGRCSAKTGTLRGVSALSGFCTTTGGRSVYFSLLENAVDALAAKRIEDRMVPKIA 406
BLAST of mRNA_P-wetherbeei_contig55196.1.1 vs. uniprot
Match: A0A7W0ZF66_9ACTN (D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W0ZF66_9ACTN) HSP 1 Score: 97.1 bits (240), Expect = 1.320e-20 Identity = 73/173 (42.20%), Postives = 98/173 (56.65%), Query Frame = 1
Query: 1 SPPLPVILRAMNLASDNFIAETLAKDVGAYGSGVGTTAAGVARTRALLTDRGIVQPSDRLVDGSGLSRANRVAAASMVRLIAAADADPTWGAALISSLAQGGQGTLIHRFLTGPATR-RVRAKTGYLNGVSAMAGRVVSRGGHHYAFALIMNSSDI--LGARATQDRVVTLLA 510
S PL I+R MN SDNF++E L K++GA + G+TAAG L G+ R+VDGSGLSR +R+ A ++V ++ ADP A ++SLA G + R L +TR RV AKTG + SA+AG V R Y FA++ N S + AR QDR VT+LA
Sbjct: 233 SEPLADIVRGMNRESDNFVSEMLLKELGASVARRGSTAAGAQVVHDELAAAGVPVTGVRIVDGSGLSRLDRLTARALVAILRIGAADPAMRDAFVTSLAVAGVSGTLKRRLDRRSTRGRVIAKTGTTSVASALAGFVRRR----YVFAIVQNGSPVPYWTARRAQDRFVTVLA 401 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig55196.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig55196.1.1 >prot_P-wetherbeei_contig55196.1.1 ID=prot_P-wetherbeei_contig55196.1.1|Name=mRNA_P-wetherbeei_contig55196.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=161bp MNLASDNFIAETLAKDVGAYGSGVGTTAAGVARTRALLTDRGIVQPSDRLback to top mRNA from alignment at P-wetherbeei_contig55196:14..526- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig55196.1.1 ID=mRNA_P-wetherbeei_contig55196.1.1|Name=mRNA_P-wetherbeei_contig55196.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig55196:14..526- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig55196:14..526- >mRNA_P-wetherbeei_contig55196.1.1 ID=mRNA_P-wetherbeei_contig55196.1.1|Name=mRNA_P-wetherbeei_contig55196.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=483bp|location=Sequence derived from alignment at P-wetherbeei_contig55196:14..526- (Phaeothamnion wetherbeei SAG_119_79)back to top |