mRNA_P-wetherbeei_contig54799.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54799.1.1 vs. uniprot
Match: UPI0010C9FEA1 (ABC transporter substrate-binding protein n=1 Tax=Rhodoligotrophos defluvii TaxID=2561934 RepID=UPI0010C9FEA1) HSP 1 Score: 199 bits (505), Expect = 1.600e-59 Identity = 98/174 (56.32%), Postives = 130/174 (74.71%), Query Frame = 1
Query: 1 WEDSETKPQTSVQKASKLLAGGANMLFGDGSSGQTLAIMPLALQRKTPLLVTTSAADQITGANRNRYTFRTSSLAFKETRMAIEYVKKAGLKSVYGLAVDQPVGRDTWNMMKAALKELGIQSAGEDFAPIGSQDYSIIIDKISKSGADGVFVVTTGSDTITLLKQAGQVKLNSR 522
WEDSETKPQ +VQKA++L+A GA++LFG+ SSG T+A+M LA +RK PLLVT SA+D+ITG ++N YTFRTS+ E RM E+ K G+K VYG+ D VGR+ W +KA LK G+ AGEDF +G++DYS+I DK++KS ADGV ++ TGSD IT LKQ+GQ+ L +
Sbjct: 71 WEDSETKPQVAVQKATRLIADGADLLFGEVSSGATIAMMKLAERRKVPLLVTISASDEITGKDKNPYTFRTSNPVDMENRMMAEFAAKDGVKRVYGVVADYAVGREMWESLKAKLKAKGVTIAGEDFPALGNKDYSLIADKVAKSDADGVAMIMTGSDAITFLKQSGQIGLKDK 244
BLAST of mRNA_P-wetherbeei_contig54799.1.1 vs. uniprot
Match: A0A6L8WC84_9PROT (ABC transporter substrate-binding protein n=3 Tax=Sneathiella TaxID=510690 RepID=A0A6L8WC84_9PROT) HSP 1 Score: 194 bits (493), Expect = 1.160e-57 Identity = 98/171 (57.31%), Postives = 124/171 (72.51%), Query Frame = 1
Query: 1 WEDSETKPQTSVQKASKLLAGGANMLFGDGSSGQTLAIMPLALQRKTPLLVTTSAADQITGANRNRYTFRTSSLAFKETRMAIEYVKKAGLKSVYGLAVDQPVGRDTWNMMKAALKELGIQSAGEDFAPIGSQDYSIIIDKISKSGADGVFVVTTGSDTITLLKQAGQVKL 513
WEDSETKPQ +VQKA++L++ GA M+FG SS T A+ + QRK PLLVT SA D+IT AN RYTFRTS+ E RMA+E+ K AGLK VYG+ D V RD W+ KAA +E G++ G D+ P+G++DYS+IIDKISK+ ADGV ++ TGSD +T LKQAGQ L
Sbjct: 76 WEDSETKPQPAVQKATRLISSGAQMIFGAASSASTAALQGITEQRKIPLLVTISADDKITRANGYRYTFRTSNTLGMEIRMALEFTKAAGLKKVYGVGADYAVTRDGWDAYKAAAEEAGVEIVGIDYPPLGNRDYSVIIDKISKTDADGVILIVTGSDGVTFLKQAGQAGL 246
BLAST of mRNA_P-wetherbeei_contig54799.1.1 vs. uniprot
Match: A0A0Q5YCF3_9BRAD (Amino acid ABC transporter substrate-binding protein n=7 Tax=Bacteria TaxID=2 RepID=A0A0Q5YCF3_9BRAD) HSP 1 Score: 193 bits (491), Expect = 2.260e-57 Identity = 96/172 (55.81%), Postives = 123/172 (71.51%), Query Frame = 1
Query: 1 WEDSETKPQTSVQKASKLLAGGANMLFGDGSSGQTLAIMPLALQRKTPLLVTTSAADQITGANRNRYTFRTSSLAFKETRMAIEYVKKAGLKSVYGLAVDQPVGRDTWNMMKAALKELGIQSAGEDFAPIGSQDYSIIIDKISKSGADGVFVVTTGSDTITLLKQAGQVKLN 516
WED ETKPQ +VQKA++LLAGGA M+FG S TLA+ LA QRK PLLVT SA D+IT N +RYTFRTS+ E RM IE+ K GLK +YG+ D RD W + A K+ GI+ G D+AP+G++DYS+I+DK++KS ADG+ V+ TG+D +T LKQ+GQV LN
Sbjct: 76 WEDDETKPQPAVQKATRLLAGGAQMMFGAVGSASTLALQGLADQRKIPLLVTISADDKITRPNGSRYTFRTSNTLGMEIRMCIEFAKVKGLKKIYGVTADYQATRDGWELFAAEAKKAGIEIVGNDYAPLGNRDYSVIVDKMAKSDADGIAVIVTGNDAVTFLKQSGQVGLN 247
BLAST of mRNA_P-wetherbeei_contig54799.1.1 vs. uniprot
Match: A0A7Y6TWV0_9BURK (ABC transporter substrate-binding protein n=1 Tax=Schlegelella koreensis TaxID=2742824 RepID=A0A7Y6TWV0_9BURK) HSP 1 Score: 191 bits (485), Expect = 1.460e-56 Identity = 98/174 (56.32%), Postives = 124/174 (71.26%), Query Frame = 1
Query: 1 WEDSETKPQTSVQKASKLLAGGANMLFGDGSSGQTLAIMPLALQRKTPLLVTTSAADQITGANRNRYTFRTSSLAFKETRMAIEYVKKAGLKSVYGLAVDQPVGRDTWNMMKAALKELGIQSAGEDFAPIGSQDYSIIIDKISKSGADGVFVVTTGSDTITLLKQAGQVKLNSR 522
WEDSETKPQ +VQK S+L+A G ++LFG SSG+T+A+MPLA Q K P LVT SA D+ITG N+ RYTFRTS+ E M E VK GLK VYG+A D R+ WN ++A L + G+Q AGEDF P+GS+DYS+IIDK+ KSGAD V VV G+D I +KQ+ +V L +
Sbjct: 71 WEDSETKPQVAVQKTSRLIASGVDVLFGAASSGETIAMMPLAAQAKVPHLVTMSADDRITGTNKTRYTFRTSNNLAMENVMVAEQVKALGLKKVYGVAADVGTTREGWNDIRALLTKEGVQIAGEDFPPLGSKDYSVIIDKVLKSGADTVVVVAAGNDAIGFVKQSHEVGLGKK 244
BLAST of mRNA_P-wetherbeei_contig54799.1.1 vs. uniprot
Match: A0A2E2E354_9PROT (Amino acid ABC transporter substrate-binding protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E2E354_9PROT) HSP 1 Score: 191 bits (485), Expect = 1.700e-56 Identity = 94/174 (54.02%), Postives = 125/174 (71.84%), Query Frame = 1
Query: 1 WEDSETKPQTSVQKASKLLAGGANMLFGDGSSGQTLAIMPLALQRKTPLLVTTSAADQITGANRNRYTFRTSSLAFKETRMAIEYVKKAGLKSVYGLAVDQPVGRDTWNMMKAALKELGIQSAGEDFAPIGSQDYSIIIDKISKSGADGVFVVTTGSDTITLLKQAGQVKLNSR 522
WEDSETKPQ +VQKA++L+AGG NMLFG SSG TLA+M + ++K PLLVT SA+D ITG RYTFRTS+ E +M ++ + GLK +YG+ D VGR+ W+ +KA LK+ ++ ED+ P+G++DYSIIIDK+ KS ADGV ++ TG D IT LKQ+GQV L +
Sbjct: 74 WEDSETKPQAAVQKATRLMAGGVNMLFGAVSSGSTLAVMKITERQKIPLLVTLSASDSITGEAMTRYTFRTSNPVNMENQMMAKFASRDGLKKIYGVVADYGVGREMWDNLKAKLKDQNVEIIAEDYPPLGNKDYSIIIDKVLKSDADGVAMIMTGGDAITFLKQSGQVGLKDQ 247
BLAST of mRNA_P-wetherbeei_contig54799.1.1 vs. uniprot
Match: UPI00117FA313 (ABC transporter substrate-binding protein n=1 Tax=Rhodoligotrophos appendicifer TaxID=987056 RepID=UPI00117FA313) HSP 1 Score: 191 bits (484), Expect = 2.220e-56 Identity = 93/174 (53.45%), Postives = 128/174 (73.56%), Query Frame = 1
Query: 1 WEDSETKPQTSVQKASKLLAGGANMLFGDGSSGQTLAIMPLALQRKTPLLVTTSAADQITGANRNRYTFRTSSLAFKETRMAIEYVKKAGLKSVYGLAVDQPVGRDTWNMMKAALKELGIQSAGEDFAPIGSQDYSIIIDKISKSGADGVFVVTTGSDTITLLKQAGQVKLNSR 522
WEDSETKPQ +VQKA++L + G ++LFG+ SSG T+A+M LA +RK PLLVT SA+D+ITG ++N YTFRTS+ E RM E+ K G+K VYG+ D VGR+ W+ +K L+ G+ AGED+ +G++DYS+I DK++KS ADGV ++ TGSD IT LKQ+GQ+ L +
Sbjct: 71 WEDSETKPQVTVQKATRLASDGVDLLFGEVSSGATIALMKLAERRKIPLLVTISASDEITGKDKNPYTFRTSNPVDMENRMMAEFAAKDGVKRVYGVVADYAVGREMWDSLKKKLEAKGVTIAGEDYPALGNKDYSLIADKVAKSDADGVAMIMTGSDAITFLKQSGQIGLKDK 244
BLAST of mRNA_P-wetherbeei_contig54799.1.1 vs. uniprot
Match: A0A0A1PTK3_9BACT (Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein n=2 Tax=Bacteria TaxID=2 RepID=A0A0A1PTK3_9BACT) HSP 1 Score: 190 bits (482), Expect = 4.770e-56 Identity = 96/171 (56.14%), Postives = 123/171 (71.93%), Query Frame = 1
Query: 1 WEDSETKPQTSVQKASKLLAGGANMLFGDGSSGQTLAIMPLALQRKTPLLVTTSAADQITGANRNRYTFRTSSLAFKETRMAIEYVKKAGLKSVYGLAVDQPVGRDTWNMMKAALKELGIQSAGEDFAPIGSQDYSIIIDKISKSGADGVFVVTTGSDTITLLKQAGQVKL 513
WED ETKPQ +VQKA++LLAGGA M+FG S TLA+ LA QRK PLLVT SA D+IT N +RYTFRTS+ ETRMA+E+ K GLK +YG+A D RD W M +A + GI G D+AP+G++D+S+I+DK++KS ADG+ V TG+D +T LKQ+GQV L
Sbjct: 75 WEDDETKPQPAVQKATRLLAGGAQMIFGAVGSASTLALQSLADQRKVPLLVTISADDKITRVNGSRYTFRTSNTLGMETRMALEFAKAKGLKKLYGVAADYQATRDGWAMFQAEAAKAGIAIVGIDYAPLGNRDFSVIVDKMAKSDADGIAVFVTGNDAVTFLKQSGQVGL 245
BLAST of mRNA_P-wetherbeei_contig54799.1.1 vs. uniprot
Match: A0A1Y5RRL8_9PROT (Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein n=1 Tax=Oceanibacterium hippocampi TaxID=745714 RepID=A0A1Y5RRL8_9PROT) HSP 1 Score: 189 bits (480), Expect = 1.020e-55 Identity = 95/171 (55.56%), Postives = 125/171 (73.10%), Query Frame = 1
Query: 1 WEDSETKPQTSVQKASKLLAGGANMLFGDGSSGQTLAIMPLALQRKTPLLVTTSAADQITGANRNRYTFRTSSLAFKETRMAIEYVKKAGLKSVYGLAVDQPVGRDTWNMMKAALKELGIQSAGEDFAPIGSQDYSIIIDKISKSGADGVFVVTTGSDTITLLKQAGQVKL 513
WEDSETKPQ +VQKAS+LLA GA+M+FG SS T+A+ L QRK PLLVT SA D+IT N +RYTFRTS+ E RMA+E+ K GLK +YG+ D V R+ W+ +A +++G++ G D+ P+G++DYS+IIDKISK+ A+GV +V TGSD +T LKQAGQ L
Sbjct: 76 WEDSETKPQPAVQKASRLLANGAHMIFGAVSSASTVALQGLTDQRKVPLLVTISADDRITRPNGSRYTFRTSNTLGMEMRMALEFTKARGLKKIYGVGADYAVTREGWDFYRAEAEKMGVEIVGIDYPPLGNRDYSVIIDKISKTDAEGVILVVTGSDGVTFLKQAGQAGL 246
BLAST of mRNA_P-wetherbeei_contig54799.1.1 vs. uniprot
Match: A0A2D8HM28_9PROT (Amino acid ABC transporter substrate-binding protein n=1 Tax=Sneathiella sp. TaxID=1964365 RepID=A0A2D8HM28_9PROT) HSP 1 Score: 184 bits (468), Expect = 6.330e-54 Identity = 95/171 (55.56%), Postives = 121/171 (70.76%), Query Frame = 1
Query: 1 WEDSETKPQTSVQKASKLLAGGANMLFGDGSSGQTLAIMPLALQRKTPLLVTTSAADQITGANRNRYTFRTSSLAFKETRMAIEYVKKAGLKSVYGLAVDQPVGRDTWNMMKAALKELGIQSAGEDFAPIGSQDYSIIIDKISKSGADGVFVVTTGSDTITLLKQAGQVKL 513
WEDSETKPQ +VQKA++L++ GA M+FG SS T A+ + QRK PLLVT SA D+IT AN RYTFRTS+ E RMA+E+ K AGLK +YG+ D V RD + AA KE GI+ D+ P+G++DYS+IIDKI+K+ ADGV ++ TGSD +T LKQAGQ L
Sbjct: 76 WEDSETKPQPTVQKATRLISSGAQMIFGAASSASTAALQGITEQRKIPLLVTISADDKITRANGYRYTFRTSNTLGMEIRMAMEFTKAAGLKKIYGVGADYAVTRDGMDAYMAAAKEAGIEIVDVDYPPLGNRDYSVIIDKIAKTDADGVVLIVTGSDGVTFLKQAGQAGL 246
BLAST of mRNA_P-wetherbeei_contig54799.1.1 vs. uniprot
Match: A0A2S0NE01_9HYPH (Amino acid ABC transporter substrate-binding protein n=1 Tax=Phreatobacter cathodiphilus TaxID=1868589 RepID=A0A2S0NE01_9HYPH) HSP 1 Score: 184 bits (467), Expect = 8.300e-54 Identity = 90/171 (52.63%), Postives = 122/171 (71.35%), Query Frame = 1
Query: 1 WEDSETKPQTSVQKASKLLAGGANMLFGDGSSGQTLAIMPLALQRKTPLLVTTSAADQITGANRNRYTFRTSSLAFKETRMAIEYVKKAGLKSVYGLAVDQPVGRDTWNMMKAALKELGIQSAGEDFAPIGSQDYSIIIDKISKSGADGVFVVTTGSDTITLLKQAGQVKL 513
WED ET+PQ +VQKA++LLA GA M+FG S TLA+ LA QRK PLLVT SA D+IT +RYTFRTS+ E RM +E+ K GLK +YG+ D RD W++ +A K++GI G D+AP+G++D+S+I+DK++KS ADG+ V+ TG+D +T LKQ+GQV L
Sbjct: 75 WEDDETRPQPAVQKATRLLANGAQMIFGAVGSASTLALQSLADQRKVPLLVTISADDKITRVGGSRYTFRTSNTLGMEIRMCVEFAKARGLKKIYGVTADYQATRDGWDLFQAEAKKVGIGIVGNDYAPLGNRDFSVIVDKMAKSDADGIAVMITGNDAVTFLKQSGQVGL 245 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54799.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54799.1.1 >prot_P-wetherbeei_contig54799.1.1 ID=prot_P-wetherbeei_contig54799.1.1|Name=mRNA_P-wetherbeei_contig54799.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=174bp WEDSETKPQTSVQKASKLLAGGANMLFGDGSSGQTLAIMPLALQRKTPLLback to top mRNA from alignment at P-wetherbeei_contig54799:5..526- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54799.1.1 ID=mRNA_P-wetherbeei_contig54799.1.1|Name=mRNA_P-wetherbeei_contig54799.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=522bp|location=Sequence derived from alignment at P-wetherbeei_contig54799:5..526- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54799:5..526- >mRNA_P-wetherbeei_contig54799.1.1 ID=mRNA_P-wetherbeei_contig54799.1.1|Name=mRNA_P-wetherbeei_contig54799.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=522bp|location=Sequence derived from alignment at P-wetherbeei_contig54799:5..526- (Phaeothamnion wetherbeei SAG_119_79)back to top |