mRNA_P-wetherbeei_contig54766.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54766.1.1 vs. uniprot
Match: A0A7C4TJA4_9ACTN (LLM class flavin-dependent oxidoreductase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7C4TJA4_9ACTN) HSP 1 Score: 83.2 bits (204), Expect = 2.860e-16 Identity = 53/139 (38.13%), Postives = 76/139 (54.68%), Query Frame = 1
Query: 1 GAVADADEPLDSPRLRAAVGPVVAVAFHAFAEQPWRLEGLPPDLQARAADYIAAVTAAYLAERRHQFLHRGHLVELVLPEDHAVVDA--QTIAGMSFTGTASQLRRRAEALSADGVTELAVQPGG-DVPNELRRLAAAL 408
G V D DE +++PR+R A+GP +A+H W+ G D A++ AA+ A RH +H GH V+P D ++DA +AG + GT ++R RAEA +A GVT+L P G DV ++R AAAL
Sbjct: 192 GTVLDDDESIETPRVREALGPWYVLAYHGT----WQTAGDAVDGLPGGAEWRAAIEAERPEGERHLAVHEGHATH-VMPRDRPLLDAAGDGLAGWGWVGTPEEVRARAEAAAASGVTDLLYTPAGPDVERDMRAFAAAL 325
BLAST of mRNA_P-wetherbeei_contig54766.1.1 vs. uniprot
Match: A0A538HGX0_9ACTN (LLM class flavin-dependent oxidoreductase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538HGX0_9ACTN) HSP 1 Score: 74.7 bits (182), Expect = 3.650e-13 Identity = 55/141 (39.01%), Postives = 78/141 (55.32%), Query Frame = 1
Query: 1 GAVADADEPLDSPRLRAAVGPVVAVAFHAFAEQPWR-LEGLPPDLQARAADYIAAVTAAYLAERRHQFLHRGHLVELVLPEDHAVVDAQTIAG-MSFTGTASQLRRRAEALSADGVTELAVQPGG-DVPNELRRLAAALLG 414
G V E SPR AAVGP +AV +HA E+ ++ LP + R + A +A RH +H+GHL+E + + DA +A ++ TG+A+++R R AL+A GVTE+A QP G D+P EL AAA G
Sbjct: 193 GTVLGDGEAPTSPRAIAAVGPALAVGYHALYERGGSAVDRLPGGPRWRESVESARPSA------RHLEIHQGHLIEANRHDQLVIEDAAPLAPKLTMTGSAAEVRERLGALAAVGVTEIAYQPAGPDIPRELEAFAAAADG 327
BLAST of mRNA_P-wetherbeei_contig54766.1.1 vs. uniprot
Match: A0A7K1Z702_9ACTN (LLM class flavin-dependent oxidoreductase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z702_9ACTN) HSP 1 Score: 71.2 bits (173), Expect = 6.650e-12 Identity = 50/141 (35.46%), Postives = 72/141 (51.06%), Query Frame = 1
Query: 1 GAVADADEPLDSPRLRAAVGPVVAVAFHAFAEQPWRLEGLPPDLQARAADYIAAVTAAYLAERRHQFLHRGHLVELVLPEDHAVVDA--QTIAGMSFTGTASQLRRRAEALSADGVTELAVQPGG-DVPNELRRLAAALLG 414
G V D E ++ PR AA+GP VA+H ++ D A D+ A + A RH + GH+ LV D V++A + IAGMS+ GTA ++R R +A + GVTE+ P G D E+R A+A +G
Sbjct: 194 GTVLDQGEVINDPRPAAAIGPWHMVAYHGI----YQAAPEAVDTMAGGPDWRAGIEAERPEGERHLVVWEGHVTHLV-ERDAPVMEASGEAIAGMSWVGTADEIRARVDAAADAGVTEVMYTPAGPDAAREIRAFASAAIG 329
BLAST of mRNA_P-wetherbeei_contig54766.1.1 vs. uniprot
Match: A0A0M8VD89_9ACTN (Methylene-tetrahydromethanopterin reductase n=1 Tax=Streptomyces sp. MMG1121 TaxID=1415544 RepID=A0A0M8VD89_9ACTN) HSP 1 Score: 70.1 bits (170), Expect = 1.830e-11 Identity = 53/134 (39.55%), Postives = 69/134 (51.49%), Query Frame = 1
Query: 1 GAVADADEPLDSPRLRAAVGPVVAVAFHAFAEQPWRLEGLPPDLQARAADYIAAVTAAYLAERRHQFLHRGHLVELVLPEDHAVVDA--QTIAGMSFTGTASQLRRRAEALSADGVTELAVQPGG-DVPNELRR 393
G V DEPLDSPR+RAA GP A+A+HA E G P L A ++ A+TA ER H +H HL +L + A Q I + TGT +R + + DG+TE+ QP G D+P EL R
Sbjct: 193 GTVLGKDEPLDSPRVRAAAGPGNALAYHAAYE----FGGDPTSLPGGQA-WLDAITAHPRTER-HLAVHDQHLTDLNAADTTAWNAGAWQAITSTTVTGTPDHIRDQLITYAQDGITEIVYQPTGPDIPGELER 320
BLAST of mRNA_P-wetherbeei_contig54766.1.1 vs. uniprot
Match: A0A250VW24_STROL (5,10-methylenetetrahydromethanopterin reductase n=4 Tax=Streptomyces TaxID=1883 RepID=A0A250VW24_STROL) HSP 1 Score: 69.7 bits (169), Expect = 2.420e-11 Identity = 53/134 (39.55%), Postives = 70/134 (52.24%), Query Frame = 1
Query: 1 GAVADADEPLDSPRLRAAVGPVVAVAFHAFAEQPWRLEGLPPDLQARAADYIAAVTAAYLAERRHQFLHRGHLVELVLPEDHA--VVDAQTIAGMSFTGTASQLRRRAEALSADGVTELAVQPGG-DVPNELRR 393
G V DEPL+SPR+RAA GP A+A+HA E G P L A ++ AV+A ER H +H HL+ L +D A Q I + T T ++R A + DG+TE+ QP G D+P EL R
Sbjct: 193 GTVLGEDEPLNSPRIRAAAGPGNALAYHAAYE----FGGDPTALPGGRA-WLDAVSAHPRTER-HLAVHDQHLIGLNAADDAAWNAGSWQAITATTVTATPDRIRDTLSAYAQDGITEIVYQPTGPDIPGELER 320
BLAST of mRNA_P-wetherbeei_contig54766.1.1 vs. uniprot
Match: A0A2D7FDX3_9HYPH (5,10-methylene tetrahydromethanopterin reductase n=2 Tax=Hyphomicrobiaceae TaxID=45401 RepID=A0A2D7FDX3_9HYPH) HSP 1 Score: 65.5 bits (158), Expect = 7.630e-10 Identity = 45/135 (33.33%), Postives = 70/135 (51.85%), Query Frame = 1
Query: 1 GAVADADEPLDSPRLRAAVGPVVAVAFH-AFAEQPWRLEGLPPDLQARAADYIAAVTAAYLAERRHQFLHRGHLVELVLPEDHAVVDAQTIAGMSFTGTASQLRRRAEALSADGVTELAVQPGG-DVPNELRRLA 399
G V D E + SPR++AA+ P++A+A+H F P + LP + A+++ ++ + RH +H GH +++ DH +VD M+FTG +LR R E ADG T + G D+ ELR A
Sbjct: 191 GTVLDEGEDVHSPRVKAAIQPIMALAYHFKFTTDPDNIADLP-----KGAEWMRSLESVP-EHVRHLSVHTGHNLDVSNGHDH-LVDISAAKEMTFTGPPDELRARLEKYKADGATGFILGTSGVDIERELRAYA 318
BLAST of mRNA_P-wetherbeei_contig54766.1.1 vs. uniprot
Match: A0A6I3AWN1_9ACTN (LLM class flavin-dependent oxidoreductase n=5 Tax=root TaxID=1 RepID=A0A6I3AWN1_9ACTN) HSP 1 Score: 65.1 bits (157), Expect = 1.080e-9 Identity = 48/134 (35.82%), Postives = 63/134 (47.01%), Query Frame = 1
Query: 1 GAVADADEPLDSPRLRAAVGPVVAVAFHAFAEQPWRLEGLPPDLQARAADYIAAVTAAYLAERRHQFLHRGHLVELVLPEDHA--VVDAQTIAGMSFTGTASQLRRRAEALSADGVTELAVQPGGDVPNELRRL 396
G V D E LD R+R A GP A+A+HA E L G L A + RH +H GH + L ++ A V + + TGTA+++R RAE L+ GVTE+ QP G PN R L
Sbjct: 193 GTVLDQGESLDGERVRLAGGPGGAIAYHATYE----LAGADAVLTLPGGKEWLATVMSVPENERHLSVHVGHCIHLNKADEAAWAVTGGSLLPTTTLTGTAAEVRARAEQLAEQGVTEMVYQPAG--PNPRREL 320 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54766.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54766.1.1 >prot_P-wetherbeei_contig54766.1.1 ID=prot_P-wetherbeei_contig54766.1.1|Name=mRNA_P-wetherbeei_contig54766.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=139bp GAVADADEPLDSPRLRAAVGPVVAVAFHAFAEQPWRLEGLPPDLQARAADback to top mRNA from alignment at P-wetherbeei_contig54766:39..455+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54766.1.1 ID=mRNA_P-wetherbeei_contig54766.1.1|Name=mRNA_P-wetherbeei_contig54766.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=417bp|location=Sequence derived from alignment at P-wetherbeei_contig54766:39..455+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54766:39..455+ >mRNA_P-wetherbeei_contig54766.1.1 ID=mRNA_P-wetherbeei_contig54766.1.1|Name=mRNA_P-wetherbeei_contig54766.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=417bp|location=Sequence derived from alignment at P-wetherbeei_contig54766:39..455+ (Phaeothamnion wetherbeei SAG_119_79)back to top |