mRNA_P-wetherbeei_contig5449.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5449.3.1 vs. uniprot
Match: A0A7S2PEX4_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PEX4_9STRA) HSP 1 Score: 159 bits (401), Expect = 1.010e-45 Identity = 95/208 (45.67%), Postives = 115/208 (55.29%), Query Frame = 1
Query: 1 MFKGSGRRGHADSLNLLLSAVRSRYLFYLEDDWLTLPPGDDDNNLAFGADFVSAALAVLQESPEE--MAQVLINDQSSRDCAEARPGACPAGEVGQGAGWL--------------HEFGVMYASHAFSYWPGFSLNPALWDLRRLGLDFGLRSVAAAAEAGTAAAEQSMSLRLQRAGLAFGHLVGARMRHIGMEASAYALNGFTRPWD 576
+FK R+GHA+SLN +L AV++RYL YLEDDWL L +N+ +S A+ VLQ E +AQVL NDQSSRDCAE + +C + GAGW HEFG+ Y H FSYWPGFSLNPA+WDL R+ G A EQS +L+ AGL F HL RH G S+Y LNG RPWD
Sbjct: 11 IFKSKLRKGHAESLNYILRAVQTRYLLYLEDDWLLL------SNVT---SVISDAMTVLQNENENTPVAQVLFNDQSSRDCAEGKE-SCSQSKFKGGAGWCRVANSVGYKVEYIEHEFGIAYLEHQFSYWPGFSLNPAIWDLERMENAMGRLEFAE----NDTQFEQSFALKAMDAGLTFAHLPQVNFRHTGTSISSYVLNGQQRPWD 204
BLAST of mRNA_P-wetherbeei_contig5449.3.1 vs. uniprot
Match: A0A7S3NGS6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NGS6_9STRA) HSP 1 Score: 155 bits (392), Expect = 3.180e-40 Identity = 93/200 (46.50%), Postives = 115/200 (57.50%), Query Frame = 1
Query: 22 RGHADSLNLLLSAVRSRYLFYLEDDWLTLPPGDDDNNLAFGADFVSAALAVLQESP---EEMAQVLINDQSSRDCAEARPGACPAGEVGQGAGW------------LHEFGVMYASHAFSYWPGFSLNPALWDLRRLGLDFGLRSVAAAAEAGTAAAEQSMSLRLQRAGLAFGHLVGARMRHIGMEASAYALNGFTRPWD 576
RGHA S+NLL+ V SRY YLEDDWLTL N + LAVL+ + E + QVL+NDQSSR CA A P CPA +G AGW LHEFG+++ +HAF+YWPGF+LNPALWDL L DF + EQ+ SL++ AGL +L + HIG++ SAY LN FTRPWD
Sbjct: 1042 RGHAQSMNLLMRLVESRYFLYLEDDWLTL-------NHVTANHLLDEPLAVLKYAESIGEPLLQVLLNDQSSRGCAYAIPNECPA--LGS-AGWPRQVNDTGPRYSLHEFGILHPNHAFTYWPGFTLNPALWDLYALVQDFSDVGFLPIFDTEDRRFEQAFSLKVYDAGLMVAYLPRVSLAHIGVDESAYGLNNFTRPWD 1231
BLAST of mRNA_P-wetherbeei_contig5449.3.1 vs. uniprot
Match: A0A7S4SZ12_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SZ12_9STRA) HSP 1 Score: 143 bits (360), Expect = 4.880e-39 Identity = 87/208 (41.83%), Postives = 111/208 (53.37%), Query Frame = 1
Query: 1 MFKGSGRRGHADSLNLLLSAVRSRYLFYLEDDWLTLPPGDDDNNLAFGADFVSAALAVLQESPEE-MAQVLINDQSSRDCAEA-RPGACPAGEVGQGAGWL--------------HEFGVMYASHAFSYWPGFSLNPALWDLRRLGLDFGLRSVAAAAEAGTAAAEQSMSLRLQRAGLAFGHLVGARMRHIGMEASAYALNGFTRPWD 576
+FK +GHA SLNL+L+ +++RYL Y+EDDW T+ A D ++ A+ VL+ E +AQVL+NDQSSR CA +C + AGW HEFGV+Y H FSYWPGFSLNPA+WDL RL + + EQ+ SL+ AGL F HL RHIG S+Y LN RPWD
Sbjct: 53 IFKPGRDKGHASSLNLILNVIKTRYLLYIEDDWKTI---------ANTVDMITDAMIVLRAPVENPIAQVLLNDQSSRSCAHGDNITSCTKNKYYGKAGWKREALFDGQTVPYIEHEFGVVYPEHTFSYWPGFSLNPAIWDLDRLHSKMNVLF-----DEEDITFEQTFSLKAMDAGLTFAHLPQINFRHIGQGISSYVLNSKQRPWD 246
BLAST of mRNA_P-wetherbeei_contig5449.3.1 vs. uniprot
Match: F0XYF1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYF1_AURAN) HSP 1 Score: 139 bits (350), Expect = 1.420e-34 Identity = 88/197 (44.67%), Postives = 111/197 (56.35%), Query Frame = 1
Query: 1 MFKGSGRRGHADSLNLLLSAVRSRYLFYLEDDWLTLPPGDDDNNLAFGADFVSAALAVLQESPEEMAQVLINDQSSRDCAEARPGACPAGEVGQGAGW-----------LHEFGVMYASHAFSYWPGFSLNPALWDLRRLGLDF-GLRSVAAAAEAGTAAAEQSMSLRLQRAGLAFGHLVGARMRHIGMEASAYALN 555
++K +GHA S+N LL V + YL YLEDDWL + A D V ALAVL+ + E + QVL+NDQSSR CA A C A VG AGW LH+FG + HAF+YWPGF+LNPALWDLR L F + A + A E+S SL+ + AGL +L + HIG++ SAYALN
Sbjct: 1038 LYKSPAHKGHARSMNALLRVVETPYLLYLEDDWLAVDG-------AAPRDVVGDALAVLEAAAEPLVQVLLNDQSSRACAYAARDGCDA--VGA-AGWPRATPGGVAYRLHDFGTVEPGHAFTYWPGFTLNPALWDLRALACAFFDVLGEAPVFDPDDAEFERSFSLKARDAGLRVAYLPRVTLAHIGVDESAYALN 1224
BLAST of mRNA_P-wetherbeei_contig5449.3.1 vs. uniprot
Match: A0A7S4A7X0_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7X0_9STRA) HSP 1 Score: 137 bits (346), Expect = 4.750e-34 Identity = 90/202 (44.55%), Postives = 119/202 (58.91%), Query Frame = 1
Query: 22 RGHADSLNLLLSAVRSRYLFYLEDDWLTLPPGDDDNNLAFGADFVSAALAVLQESPEE--MAQVLINDQSSRDCAEARPGACPAGEVGQGAGW-----------LHEFGVMYASHAFSYWPGFSLNPALWDLRRLGL----DFGLRSVAAAAEAGTAAAEQSMSLRLQRAGLAFGHLVGARMRHIGMEASAYALNGFTRPWD 576
+GHA S+NLLLS V++ YL Y+EDDWL L D ++ D AL+VL+ + EE + +VL+NDQSSR CA A CP +G+ AGW LH++G + HAF+YWPGFSLNPALWD+RRL FG V + +A EQS SL+ AG+ +L H G++ +AYALN FTRP+D
Sbjct: 1083 KGHARSMNLLLSMVQTPYLLYMEDDWLAL----DHVSVTHVLD---EALSVLRAAHEEEPVVEVLLNDQSSRSCAYAAEEGCPM--LGK-AGWPRVTSDGIAYRLHDYGTVEPGHAFTYWPGFSLNPALWDVRRLQCAFSESFGEPPVFNSTDARF---EQSFSLKAYDAGIRVAYLPRVSFAHTGVDQTAYALNNFTRPFD 1271
BLAST of mRNA_P-wetherbeei_contig5449.3.1 vs. uniprot
Match: A0A2D4BI35_PYTIN (Glyco_trans_2-like domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BI35_PYTIN) HSP 1 Score: 120 bits (300), Expect = 6.440e-28 Identity = 83/194 (42.78%), Postives = 103/194 (53.09%), Query Frame = 1
Query: 7 KGSGRRGHADSLNLLLSAVRSRYLFYLEDDWLTLPPGDDDNNLAFGADFVSAALAVLQESPEEMAQVLINDQSSRDCAEARPGACPAGEVGQGAGWLHEFGVMYASHAFSYWPGFSLNPALWDLRRLGLDFGLRSVA---AAAEAGTAAAEQSMSLRLQRAGLAFGHLVGARMRHIGMEASAYALNGFTRPWDA 579
K RGHA SLNL L VR+RYL Y+EDDW N A + FV A+AVL+ S ++MAQ+L+N+ S R G P + HEFG+ H F+YWPGFSLNPALWDL RL F + A + T E+ SLR+ R GL G+L G H G SAY LNG R +D+
Sbjct: 610 KSPSERGHAKSLNLALQRVRARYLLYVEDDWFFR------NTTA--SSFVDDAVAVLR-SQKDMAQILLNEHESG----WRFGLTPPTTPRVVRFYRHEFGLSDPLHKFAYWPGFSLNPALWDLARLDAVFAPVNATHPIAWFDERTDVFERRFSLRVWRTGLQVGYLHGRHCDHTGTNVSAYVLNGMPRRFDS 790
BLAST of mRNA_P-wetherbeei_contig5449.3.1 vs. uniprot
Match: A0A7S2R515_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R515_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.320e-24 Identity = 61/144 (42.36%), Postives = 79/144 (54.86%), Query Frame = 1
Query: 1 MFKGSGRRGHADSLNLLLSAVRSRYLFYLEDDWLTLPPGDDDNNLAFGADFVSAALAVLQESPEEMAQVLINDQSSRDCAEARPGACPAGEVGQGAGW------------------LHEFGVMYASHAFSYWPGFSLNPALWDL 378
++K R+GHADSLNLLL+ V + Y YLEDDW L G + L + A + E + QVL+NDQ+SRDCA A ACP +G AGW +HEFGV H F+YWPGF+LNPA+W++
Sbjct: 109 VWKPPHRKGHADSLNLLLAMVETPYFLYLEDDWAFL--GSSASPLVEAVHILEAT----SHTQEPIHQVLLNDQASRDCAYATVSACPRSMLGS-AGWRRSLSMGDSAGRGEIHYNVHEFGVTGQQHPFTYWPGFTLNPAMWNV 245
BLAST of mRNA_P-wetherbeei_contig5449.3.1 vs. uniprot
Match: A0A3L6VJZ2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VJZ2_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.210e-23 Identity = 74/187 (39.57%), Postives = 94/187 (50.27%), Query Frame = 1
Query: 19 RRGHADSLNLLLSAVRSRYLFYLEDDWLTLPPGDDDNNLAFGADFVSAALAVLQESPEEMAQVLINDQSSRDCAEARPGACPA-GEVGQGAGWLHEFGVMYASHAFSYWPGFSLNPALWDLRRLGLDFGLRSVAAAAEAGTAAAEQSMSLRLQRAGLAFGHLVGARMRHIGMEASAYALNGFTRPWD 576
R+GHA SLN +L V +R++ YLEDDW P + LA ALA+L+ P + QVL+N Q S P P + G + HE+GV+ HAF YWPGFSLNP +WDL+RL LR + E+ SL + R GL L HIG SAY LNG R +D
Sbjct: 15 RKGHAHSLNTMLELVTTRFMLYLEDDW-RWEPSLPHHPLAH-------ALAILEHDPT-IVQVLVNTQHS-----GWPRQLPTTDDTSFGLYFRHEYGVV--DHAFGYWPGFSLNPGVWDLKRLSRCPALRF-----NESSDVFEREFSLAVWRCGLHVAMLPYTTAVHIGTNGSAYVLNGLPRRFD 180
BLAST of mRNA_P-wetherbeei_contig5449.3.1 vs. uniprot
Match: A0A8K1CIY0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIY0_PYTOL) HSP 1 Score: 106 bits (265), Expect = 3.340e-23 Identity = 75/195 (38.46%), Postives = 101/195 (51.79%), Query Frame = 1
Query: 4 FKGSGRRGHADSLNLLLSAVRSRYLFYLEDDWLTLPPGDDDNNLAFGADFVSAALAVLQESPEEMAQVLINDQSSRDCAEARPGACPAGEVGQGAGWLHEFGVMYASHAFSYWPGFSLNPALWDLRRLGLDFGLRSVAAAAEAGTAAAEQSMSLRLQRAGLAFGHLVGARMRHIGME----ASAYALNGFTRPWD 576
FK RGHA SLN+ L +++R+LFY+EDDW ADF+ + +L+++ E+ QVLIN QSS R + HEF V+ H FSYWPGFSLNP +WD+ +L ++ A++ E+ SLR+ RAGL G+L HIG E ASAY LNG R +D
Sbjct: 996 FKMKEERGHAKSLNMALQRLQARFLFYVEDDW---------EFRGSNADFLRNTVTILRKT--ELVQVLINTQSSGWSRYLRDETSDTNIQY----FRHEFAVLDPGHRFSYWPGFSLNPGVWDIAKLQHVLESQAFDEASDI----FERVFSLRVWRAGLQTGYLAEQHCVHIGAEPGTNASAYVLNGLPRRFD 1171
BLAST of mRNA_P-wetherbeei_contig5449.3.1 vs. uniprot
Match: A0A418DNA1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418DNA1_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 3.170e-22 Identity = 73/186 (39.25%), Postives = 93/186 (50.00%), Query Frame = 1
Query: 22 RGHADSLNLLLSAVRSRYLFYLEDDWLTLPPGDDDNNLAFGADFVSAALAVLQESPEEMAQVLINDQSSRDCAEARPGACPA-GEVGQGAGWLHEFGVMYASHAFSYWPGFSLNPALWDLRRLGLDFGLRSVAAAAEAGTAAAEQSMSLRLQRAGLAFGHLVGARMRHIGMEASAYALNGFTRPWD 576
+GHA SLN +L V +R++ YLEDDW P + LA ALA+L+ P + QVL+N Q S P P + G + HE+GV+ HAF YWPGFSLNP +WDL+RL LR + E+ SL + R GL L HIG SAY LNG R +D
Sbjct: 84 KGHAHSLNTMLELVTTRFMLYLEDDW-RWEPSLPHHPLAH-------ALAILEHDPT-IVQVLVNTQHS-----GWPRRLPTTDDTSFGLYFRHEYGVV--DHAFGYWPGFSLNPGVWDLKRLSRCPALRF-----NESSDVFEREFSLAVWRCGLHVAMLPYTTAVHIGTNGSAYVLNGLPRRFD 248 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5449.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5449.3.1 >prot_P-wetherbeei_contig5449.3.1 ID=prot_P-wetherbeei_contig5449.3.1|Name=mRNA_P-wetherbeei_contig5449.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=198bp MFKGSGRRGHADSLNLLLSAVRSRYLFYLEDDWLTLPPGDDDNNLAFGADback to top mRNA from alignment at P-wetherbeei_contig5449:2240..3540- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5449.3.1 ID=mRNA_P-wetherbeei_contig5449.3.1|Name=mRNA_P-wetherbeei_contig5449.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1301bp|location=Sequence derived from alignment at P-wetherbeei_contig5449:2240..3540- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5449:2240..3540- >mRNA_P-wetherbeei_contig5449.3.1 ID=mRNA_P-wetherbeei_contig5449.3.1|Name=mRNA_P-wetherbeei_contig5449.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=594bp|location=Sequence derived from alignment at P-wetherbeei_contig5449:2240..3540- (Phaeothamnion wetherbeei SAG_119_79)back to top |