mRNA_P-wetherbeei_contig54440.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54440.1.1 vs. uniprot
Match: A0A3D5DG07_9GAMM (Cell division protein FtsQ n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DG07_9GAMM) HSP 1 Score: 152 bits (383), Expect = 3.460e-43 Identity = 69/128 (53.91%), Postives = 92/128 (71.88%), Query Frame = 1
Query: 55 WLARELSDPAALPIRRVMVEGEFKHLTTEHVQRAVVGAVHAGFFGVDVTDIRRLLQDEAWIRDANVSRMWPDGLHVTIVEQIPVARWGDYGLLNERADIFVPMSEDLPQDLVQLNGLLGSEQEVLERF 438
+LA++L DP PI+++ V+GEF HLT +H+Q V AVH GFF VDVT +R + DE W+ DA V R+WPD + V+I EQ+ VARWG+Y LLN ADIFVP +P DLV NG +G+E+E+L+RF
Sbjct: 42 FLAQQLFDPMTFPIKKIAVDGEFHHLTAKHMQTVVSNAVHGGFFDVDVTSVRAHILDEPWVSDATVRRVWPDMIRVSIREQVAVARWGEYALLNPVADIFVPEPSAIPDDLVAFNGPIGTEEEMLQRF 169
BLAST of mRNA_P-wetherbeei_contig54440.1.1 vs. uniprot
Match: A0A3M1DP19_9GAMM (Cell division protein FtsQ n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1DP19_9GAMM) HSP 1 Score: 135 bits (341), Expect = 8.930e-37 Identity = 66/139 (47.48%), Postives = 94/139 (67.63%), Query Frame = 1
Query: 22 VMLLATLIGMVWLARELSDPAALPIRRVMVEGEFKHLTTEHVQRAVVGAVHAGFFGVDVTDIRRLLQDEAWIRDANVSRMWPDGLHVTIVEQIPVARWGDYGLLNERADIFVPMSEDLPQDLVQLNGLLGSEQEVLERF 438
V+ LA L G V R L+DP LPIR V V GEF+HL+ +++ V GFFG+DV IR++L DE W+R+ +V R+WPD L VT++EQ+PVARWG++ L+N+ ++F P +P+ LV+L G GSE+E+L R
Sbjct: 29 VLSLALLTGAVQGWRWLTDPGTLPIREVRVLGEFRHLSPARMEQGVADRATGGFFGIDVEGIRKVLLDEPWVREVSVRRVWPDTLQVTVLEQVPVARWGEHALVNDAGELFRPDPATIPRRLVRLEGPRGSERELLARM 167
BLAST of mRNA_P-wetherbeei_contig54440.1.1 vs. uniprot
Match: A0A523NX98_9PROT (Cell division protein FtsQ n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523NX98_9PROT) HSP 1 Score: 135 bits (340), Expect = 1.060e-36 Identity = 64/128 (50.00%), Postives = 88/128 (68.75%), Query Frame = 1
Query: 55 WLARELSDPAALPIRRVMVEGEFKHLTTEHVQRAVVGAVHAGFFGVDVTDIRRLLQDEAWIRDANVSRMWPDGLHVTIVEQIPVARWGDYGLLNERADIFVPMSEDLPQDLVQLNGLLGSEQEVLERF 438
+L + +++PAA PI+++ VEGEF H+T+EHVQ V+ AV GFF V+V +R + DE W+ DA V R+WPD + V+I EQ VARWG++ LLN ADIFVP S L L+G +GSE E+L R+
Sbjct: 44 YLTQWITNPAAFPIKKIAVEGEFNHMTSEHVQAVVLNAVDGGFFNVNVAAVRSRILDEPWVLDAAVRRVWPDTIRVSIHEQTAVARWGEHALLNRFADIFVPESSPKSSRLAVLDGPIGSESEMLSRY 171
BLAST of mRNA_P-wetherbeei_contig54440.1.1 vs. uniprot
Match: A0A836X7A3_9GAMM (Cell division protein FtsQ n=1 Tax=Thiotrichaceae bacterium TaxID=2030882 RepID=A0A836X7A3_9GAMM) HSP 1 Score: 122 bits (307), Expect = 7.610e-32 Identity = 59/130 (45.38%), Postives = 80/130 (61.54%), Query Frame = 1
Query: 49 MVWLARELSDPAALPIRRVMVEGEFKHLTTEHVQRAVVGAVHAGFFGVDVTDIRRLLQDEAWIRDANVSRMWPDGLHVTIVEQIPVARWGDYGLLNERADIFVPMSEDLPQDLVQLNGLLGSEQEVLERF 438
+VW LS+P LPI++V VEG+F HL+ +Q V V GFF +DV +R L +E W+ + V R+WPD L V ++EQIPV RW D GLLN + F P +PQ+L L+G +G+E VL RF
Sbjct: 40 LVWGGMFLSNPDTLPIKQVRVEGDFTHLSPIDLQLLVTDKVRGGFFNLDVDAVRFALLNEPWVSEVTVKRIWPDALRVIVIEQIPVVRWNDSGLLNSSGEYFSPELSTIPQELPLLSGPIGAEVNVLNRF 169
BLAST of mRNA_P-wetherbeei_contig54440.1.1 vs. uniprot
Match: A0A661BM65_9GAMM (Cell division protein FtsQ n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661BM65_9GAMM) HSP 1 Score: 120 bits (300), Expect = 5.610e-31 Identity = 58/123 (47.15%), Postives = 81/123 (65.85%), Query Frame = 1
Query: 70 LSDPAALPIRRVMVEGEFKHLTTEHVQRAVVGAVHAGFFGVDVTDIRRLLQDEAWIRDANVSRMWPDGLHVTIVEQIPVARWGDYGLLNERADIFVPMSEDLPQDLVQLNGLLGSEQEVLERF 438
L+D A PIR V + GEF+HL +Q+++ GA+ A F VDV +R + W+RDA+V R+WPD LHV +VE++ VARWG+ GLL E +F+P + DLVQL G GS++EVL R+
Sbjct: 24 LADLQARPIRAVRIAGEFQHLARPALQQSISGALSARVFSVDVDAVRDAARRLPWVRDASVRRVWPDSLHVAVVERVAVARWGERGLLEEDGALFIPERQTALNDLVQLRGPDGSQREVLSRY 146
BLAST of mRNA_P-wetherbeei_contig54440.1.1 vs. uniprot
Match: A0A1G0G9M6_9GAMM (Cell division protein FtsQ n=1 Tax=Gammaproteobacteria bacterium RBG_16_51_14 TaxID=1798265 RepID=A0A1G0G9M6_9GAMM) HSP 1 Score: 120 bits (300), Expect = 1.340e-30 Identity = 59/140 (42.14%), Postives = 86/140 (61.43%), Query Frame = 1
Query: 19 LVMLLATLIGMVWLARELSDPAALPIRRVMVEGEFKHLTTEHVQRAVVGAVHAGFFGVDVTDIRRLLQDEAWIRDANVSRMWPDGLHVTIVEQIPVARWGDYGLLNERADIFVPMSEDLPQDLVQLNGLLGSEQEVLERF 438
LV+ + ++ +VW A LS+PA LPI++V +EGEF L + ++ V V GFF ++V +R +L W+++ V R+WPDGL V++ EQ+ VARWG GLLN + F P E P +L +L G G+E VL RF
Sbjct: 32 LVLTITCMVLLVWGAYLLSNPATLPIKQVRIEGEFFRLAPDRLKIMVTDKVRGGFFNLNVDTVRNVLLANPWVKEVTVQRVWPDGLRVSVSEQVAVARWGQDGLLNPAGEYFAPERETFPDELPELYGPRGTEVLVLNRF 171
BLAST of mRNA_P-wetherbeei_contig54440.1.1 vs. uniprot
Match: A0A849MFW0_9PROT (Cell division protein FtsQ n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A849MFW0_9PROT) HSP 1 Score: 118 bits (296), Expect = 3.350e-30 Identity = 57/129 (44.19%), Postives = 79/129 (61.24%), Query Frame = 1
Query: 52 VWLARELSDPAALPIRRVMVEGEFKHLTTEHVQRAVVGAVHAGFFGVDVTDIRRLLQDEAWIRDANVSRMWPDGLHVTIVEQIPVARWGDYGLLNERADIFVPMSEDLPQDLVQLNGLLGSEQEVLERF 438
VW LS+ LPI++V +EG+F +L+ +Q V V GFF +DV +R L DE W+++ V R+WPD L V ++EQIPV RW + GLLN A+ F P +P+DL L G G+E +LERF
Sbjct: 41 VWAGMYLSNSDTLPIKQVRIEGDFTNLSPIDLQLLVTDKVRGGFFNLDVDAVRLALLDEPWVKEVTVKRIWPDALRVIVIEQIPVVRWKESGLLNAGAEYFAPEVASIPKDLPLLAGPAGTEAVLLERF 169
BLAST of mRNA_P-wetherbeei_contig54440.1.1 vs. uniprot
Match: A0A5Q0EJ01_9GAMM (Cell division protein FtsQ n=1 Tax=gamma proteobacterium SS-5 TaxID=947516 RepID=A0A5Q0EJ01_9GAMM) HSP 1 Score: 117 bits (294), Expect = 2.270e-29 Identity = 56/142 (39.44%), Postives = 90/142 (63.38%), Query Frame = 1
Query: 13 VFLVMLLATLIGMVWLARELSDPAALPIRRVMVEGEFKHLTTEHVQRAVVGAVHAGFFGVDVTDIRRLLQDEAWIRDANVSRMWPDGLHVTIVEQIPVARWGDYGLLNERADIFVPMSEDLPQDLVQLNGLLGSEQEVLERF 438
V L ++LA L+G+ WL SDP+ P+R +EG+ +HL +++AV ++ AGFF VDV +++R + W+ +V R+WPD LH+ + EQ P+ARWG++ L+N R +F P +PQ L L+G GS E+++R+
Sbjct: 27 VSLFLVLALLLGVRWL----SDPSVSPLRLARIEGDLRHLKRADLEQAVAASIRAGFFTVDVQEVKRAAEALPWVERVSVRRVWPDTLHLWVQEQQPLARWGEHALVNPRGQVFRPEPASIPQRLPLLHGPEGSAAELIQRY 164
BLAST of mRNA_P-wetherbeei_contig54440.1.1 vs. uniprot
Match: A0A1I4RB30_ECTMO (Cell division protein FtsQ n=4 Tax=Ectothiorhodospira mobilis TaxID=195064 RepID=A0A1I4RB30_ECTMO) HSP 1 Score: 114 bits (285), Expect = 1.790e-28 Identity = 62/138 (44.93%), Postives = 83/138 (60.14%), Query Frame = 1
Query: 28 LLATLIGMVW-LARELSDPAALPIRRVMVEGEFKHLTTEHVQRAVVGAVHAGFFGVDVTDIRRLLQDEAWIRDANVSRMWPDGLHVTIVEQIPVARWGDYGLLNERADIFVPMSEDLPQDLVQLNGLLGSEQEVLERF 438
LL L G VW L L LP+ RV VEGE +HL E VQ V + AGFF +D+ +RR L+ WIR+A+V R+WPDG+ + + EQ+PVARWGD +LN+ + F P + LP L L G G E+ ++ER
Sbjct: 36 LLVALAGTVWTLTGYLDRVDTLPVERVTVEGELRHLPRETVQEVVSAHLPAGFFTLDLAAVRRDLEALPWIRNASVERVWPDGVRLRVDEQVPVARWGDAAVLNQYGEPFRPGAGTLPPGLPALEGPPGRERVLMERL 173
BLAST of mRNA_P-wetherbeei_contig54440.1.1 vs. uniprot
Match: A0A2E0PVC7_9GAMM (Cell division protein FtsQ n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E0PVC7_9GAMM) HSP 1 Score: 114 bits (284), Expect = 2.420e-28 Identity = 57/145 (39.31%), Postives = 90/145 (62.07%), Query Frame = 1
Query: 4 TTVVFLVMLLATLIGMVWLARELSDPAALPIRRVMVEGEFKHLTTEHVQRAVVGAVHAGFFGVDVTDIRRLLQDEAWIRDANVSRMWPDGLHVTIVEQIPVARWGDYGLLNERADIFVPMSEDLPQDLVQLNGLLGSEQEVLERF 438
+++ FL+ +L ++G++ L +P LPI++V +EG+F L+ ++ V+ V GFF +DV +R L DE W+ + V R+WPD L VT++EQIPV RW + GLLN + F P E +P+ L L+G GSEQ +L ++
Sbjct: 29 SSIFFLIFMLVIMVGVMILL----NPGILPIKQVRIEGDFTRLSPVDLKLLVIDKVRGGFFNLDVDAVRFALLDEPWVSEVIVKRIWPDLLRVTVMEQIPVVRWANSGLLNMAGEYFSPEFETIPKWLPMLSGPAGSEQSLLNKY 169 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54440.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54440.1.1 >prot_P-wetherbeei_contig54440.1.1 ID=prot_P-wetherbeei_contig54440.1.1|Name=mRNA_P-wetherbeei_contig54440.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=138bp MLLATLIGMVWLARELSDPAALPIRRVMVEGEFKHLTTEHVQRAVVGAVHback to top mRNA from alignment at P-wetherbeei_contig54440:93..530+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54440.1.1 ID=mRNA_P-wetherbeei_contig54440.1.1|Name=mRNA_P-wetherbeei_contig54440.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=438bp|location=Sequence derived from alignment at P-wetherbeei_contig54440:93..530+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54440:93..530+ >mRNA_P-wetherbeei_contig54440.1.1 ID=mRNA_P-wetherbeei_contig54440.1.1|Name=mRNA_P-wetherbeei_contig54440.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=414bp|location=Sequence derived from alignment at P-wetherbeei_contig54440:93..530+ (Phaeothamnion wetherbeei SAG_119_79)back to top |