mRNA_P-wetherbeei_contig5438.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5438.2.1 vs. uniprot
Match: A0A835Z7W2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7W2_9STRA) HSP 1 Score: 112 bits (280), Expect = 8.920e-22 Identity = 78/246 (31.71%), Postives = 123/246 (50.00%), Query Frame = 1
Query: 73 DGSQFLDYLKGQQRMAFDWLYDPVDRC-IRCIIWATAAQIMASMKYS-DVVLQDCTFGTNQFGILLCLFIGVDCNMR-----YAVLEREDTAGMIWAFEWFIHNCCPPGVH-PVTWLTDGCAAAAAAIM-KVCPSSHHF-LCSWHLWKNIKHTDQRMRGESLLRDAIKTAFRKAEYSLSEASFRAAW-GSLEKLLDVPAVPDQLRRYFA-RLYTDRGRWAFCYRSRAFTLSLSATSRVEGTFAALK 774
D +F+ L Q+ Y+ D C + WAT Q+ +M++ DV+ QDCT GTN++G+ L + +GV+ + + A+LEREDT W +F+H G H P TD ++ A + + C + + L++ +H + SL++ +A + +EASF+ AW G L+ L+D A D + +Y +Y R RWAFCYR TL +++T R EG F LK
Sbjct: 225 DCQEFIKQLGAVQKAGGYAKYELADDCSFKRAFWATQDQVERAMEFGLDVIQQDCTLGTNKYGLALSIIVGVNGDSKTRMFCQALLEREDTEAFSW---FFVHYVKMVGGHYPFVCFTDRLSSQAIGVKAQACERNQQCKYAGYKLYQEARHIAAQEMFRSLMQ--------RASRAPTEASFQGAWKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTRRCEGYFGILK 459
BLAST of mRNA_P-wetherbeei_contig5438.2.1 vs. uniprot
Match: A0A835Z0Q7_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Q7_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 2.680e-17 Identity = 76/243 (31.28%), Postives = 110/243 (45.27%), Query Frame = 1
Query: 73 DGSQFLDYLKGQQRMAFDWLYDPVDRC-IRCIIWATAAQIMASMKYS-DVVLQDCTFGTNQFGILLCLFIGVDCNMR-----YAVLEREDTAGMIWAFEWFIHNCCPPGVHPVTWLTDGCAAAAAAIMKVCPSSHHFLCSWHLWKNIKHTDQRMRGESLLRDAIKTAFRKAEYSLSEASFRAAW-GSLEKLLDVPAVPDQLRRYFA-RLYTDRGRWAFCYRSRAFTLSLSATSRVEGTFAALK 774
D +F+ L Q+ Y+ D C + WAT Q+ +M++ DV+ QDCTFGTN++G+ L + +GV+ + + A+LEREDT AF WF VH V + H+ S+ R ++ A R +EASF+ AW G L+ L+D A D + +Y +Y R RWAFCYR TL +++T R EG F LK
Sbjct: 48 DCQEFIKQLGAVQKAGGYAEYELADDCSFKRAFWATQDQVERAMEFGLDVIQQDCTFGTNKYGLALSIIVGVNGDSKTRMFCQALLEREDTE----AFSWFF-------VHYVKMV----------------GGHY--------------------PSMFRSLMQRALRAP----TEASFQGAWKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILK 239
BLAST of mRNA_P-wetherbeei_contig5438.2.1 vs. uniprot
Match: A0A836CA74_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA74_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 9.010e-17 Identity = 76/243 (31.28%), Postives = 110/243 (45.27%), Query Frame = 1
Query: 73 DGSQFLDYLKGQQRMAFDWLYDPVDRC-IRCIIWATAAQIMASMKYS-DVVLQDCTFGTNQFGILLCLFIGVDCNMR-----YAVLEREDTAGMIWAFEWFIHNCCPPGVHPVTWLTDGCAAAAAAIMKVCPSSHHFLCSWHLWKNIKHTDQRMRGESLLRDAIKTAFRKAEYSLSEASFRAAW-GSLEKLLDVPAVPDQLRRYFA-RLYTDRGRWAFCYRSRAFTLSLSATSRVEGTFAALK 774
D +F+ L Q+ Y+ D C + WAT Q+ +M++ DV+ QDCTFGTN++G+ L + +GV+ + + A+LEREDT AF WF VH V + H+ S+ R ++ A R +EASF+ AW G L+ L+D A D + +Y +Y R RWAFCYR TL +++T R EG F LK
Sbjct: 173 DCQEFIKQLGAVQKAGGYAEYELADDCSFKRAFWATQDQVERAMEFGLDVIQQDCTFGTNKYGLALSIIVGVNGDSKTRMFCQALLEREDTE----AFSWFF-------VHYVKMV----------------GGHY--------------------PSMFRSLMQRASRAP----TEASFQGAWKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTRRCEGYFGILK 364
BLAST of mRNA_P-wetherbeei_contig5438.2.1 vs. uniprot
Match: UPI0009013684 (protein FAR1-RELATED SEQUENCE 7-like n=1 Tax=Ipomoea nil TaxID=35883 RepID=UPI0009013684) HSP 1 Score: 87.4 bits (215), Expect = 4.170e-14 Identity = 63/249 (25.30%), Postives = 109/249 (43.78%), Query Frame = 1
Query: 70 TDGSQFLDYLKGQQRMAFDWLYD---PVDRCIRCIIWATAAQIMASMKYSDVVLQDCTFGTNQFGILLCLFIGVD---CNMRYAV--LEREDTAGMIWAFEWFIHNCCPPGVHPVTWLTDGCAAAAAAIMKVCPSSHHFLCSWHLWKNIKHTDQRMRGESLLRDAIKTAFRKAEYSLSEASFRAAWGSLEKLLDVPAVPDQLRRYFARLYTDRGRWAFCYRSRAFTLSLSATSRVEGTFAALKRLLRGT 792
TD + ++ + +Q D+ +D +D + W + D+++ D T+ TN++ ++ F+G++ N+ + L E +W F+ F + G P T +TD CAA AAAI KV P+S H LC WH+ +N K + +R D + Y+ +EA F+ W L V + +LY R +W + F+ + ++ R E T ++ R L T
Sbjct: 297 TDSNSLIEIFRRRQSTETDFFFDFELDLDARLCIFFWRDGQMRRDYEVFGDLLVHDTTYRTNKYDMICAPFVGMNHHCMNVMFGCGFLMNERIESFVWLFKVFSRSM--GGKSPQTIMTDQCAAMAAAISKVFPTSRHRLCIWHIGENSKKHIKTLRSNKDFLDMFNYVLK---YTETEAEFQFYWTRL-----VTDYKCHKNTWLEKLYDCREKWCPAFNKDYFSGGILSSQRSETTNHSISRRLSKT 535
BLAST of mRNA_P-wetherbeei_contig5438.2.1 vs. uniprot
Match: UPI000900FE6D (protein FAR1-RELATED SEQUENCE 7-like n=2 Tax=Ipomoea nil TaxID=35883 RepID=UPI000900FE6D) HSP 1 Score: 87.0 bits (214), Expect = 6.700e-14 Identity = 63/249 (25.30%), Postives = 109/249 (43.78%), Query Frame = 1
Query: 70 TDGSQFLDYLKGQQRMAFDWLYD---PVDRCIRCIIWATAAQIMASMKYSDVVLQDCTFGTNQFGILLCLFIGVD---CNMRYAV--LEREDTAGMIWAFEWFIHNCCPPGVHPVTWLTDGCAAAAAAIMKVCPSSHHFLCSWHLWKNIKHTDQRMRGESLLRDAIKTAFRKAEYSLSEASFRAAWGSLEKLLDVPAVPDQLRRYFARLYTDRGRWAFCYRSRAFTLSLSATSRVEGTFAALKRLLRGT 792
TD + ++ + +Q D+ +D +D + W + D+++ D T+ TN++ ++ F+G++ N+ + L E +W F+ F + G P T +TD CAA AAAI KV P+S H LC WH+ +N K + +R D + Y+ +EA F+ W L V + +LY R +W + F+ + ++ R E T ++ R L T
Sbjct: 418 TDSNSLIEIFRRRQSTETDFFFDFELDLDARLCSFFWRDGQMRRDYEVFGDLLVHDTTYRTNKYDMICAPFVGMNHHCMNVMFGCGFLMNERIESFLWLFKVFSRSM--GGKSPQTIMTDQCAAMAAAISKVFPTSRHRLCIWHIGENSKKHIKTLRSNKDFLDMFNYVLK---YTETEAEFQFYWTRL-----VTDYKCHKNTWLEKLYDCREKWCPAFNKDYFSGGILSSQRSETTNHSISRRLSKT 656
BLAST of mRNA_P-wetherbeei_contig5438.2.1 vs. uniprot
Match: UPI00090109E0 (protein FAR1-RELATED SEQUENCE 12-like n=1 Tax=Ipomoea nil TaxID=35883 RepID=UPI00090109E0) HSP 1 Score: 85.1 bits (209), Expect = 1.470e-13 Identity = 63/252 (25.00%), Postives = 109/252 (43.25%), Query Frame = 1
Query: 70 TDGSQFLDYLKGQQRMAFDWLYD---PVDRCIRCIIWATAAQIMASMKYSDVVLQDCTFGTNQFGILLCLFIGVD---CNMRYAV--LEREDTAGMIWAFEWFIHNC---CPPGVHPVTWLTDGCAAAAAAIMKVCPSSHHFLCSWHLWKNIKHTDQRMRGESLLRDAIKTAFRKAEYSLSEASFRAAWGSLEKLLDVPAVPDQLRRYFARLYTDRGRWAFCYRSRAFTLSLSATSRVEGTFAALKRLLRGT 792
TD + ++ + +Q D+ +D +D + W + D+V+ D T+ TN++ ++ F+G++ N+ + L E +W F+ F+ + CP T +TD CAA AAAI V P+S H LC WH+ +N K + +R D + Y+ +EA F+ W L V + +LY R +W + F+ + ++ R E T ++ R L T
Sbjct: 219 TDSNSLIEIFRRRQSTETDFFFDFELDLDARLCSFFWRDGQMRRDYELFGDLVVHDTTYRTNKYDMICGPFVGMNHHCMNVMFGCGFLMNERIESFVWLFKAFLRSMGCKCPQ-----TIMTDQCAAMAAAISTVFPTSRHRLCIWHIGENSKKHIKMLRNNKDFLDMFNYVLK---YTETEAEFQFYWTRL-----VTDYKCHKNTWLEKLYDSREKWCTAFNKDYFSGGILSSQRSETTNHSISRRLSKT 457
BLAST of mRNA_P-wetherbeei_contig5438.2.1 vs. uniprot
Match: A0A397GQN3_9GLOM (SWIM-type domain-containing protein n=2 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397GQN3_9GLOM) HSP 1 Score: 85.5 bits (210), Expect = 1.940e-13 Identity = 93/351 (26.50%), Postives = 149/351 (42.45%), Query Frame = 1
Query: 16 YQVKNLINGVRATQK--DLSTDGSQFLDYLKGQQRMAFDWLYD---PVDRCIRCIIWATAAQIMASMKYSDVVLQDCTFGTNQFGILLCLFIGVD--CNMRY---AVLEREDTAGMIWAFEWFIHNCCPPGVH--PVTWLTDGCAAAAAAIMKVCPSSHHFLCSWHLWKNIKHTDQRMRGESLLRDAIKTAFRKAEYSLSEASFRAAWGSLEKLLDVPAVPDQLRRYFARLYTDRGRWAFCYRSRAFTLSLSATSRVEGTFAALKRLLRGTVRGLSWLGQHLTALSLEKALKELYEAAKGRWGHLGSLPGWLPSHFPDVLGFVDTRGSVWLQSFIRGEMSRAPAYKVTPIN 1032
+Q ++L N ++ + ++ D S L L ++ W+ D + + ++W + QI +KY DVV+ D T TNQ+ +LL +FI +D C R A++ E +W E C P+ TD A AAI V P ++ C +H+ +N+ + GE D IK F + SL E F+ W L L D PA D L R R + WA Y + FT + +TSR+EG +K+ L+ + + L E+ + YE + ++ S G F + +D + + + IR EMS+ IN
Sbjct: 257 FQDQDLANAIQKYKNINKINNDASTLLTSLLQKKIEDLRWVVDFELDKENQLTRLLWMSPDQIDLWLKYYDVVVNDNTAKTNQYQMLLGIFIIIDNKCKTRLVCQALVSDETLDTHVWILE-----CIRKATEQAPIVMFTDANPALDAAIPIVFPETYPAHCIFHIAQNLPKNLKGKLGERW-NDFIKQ-FYQCRNSLCEPLFKQRWNQL--LNDFPASKDYLLRTLGR---NCRSWARAYLYKIFTAGIESTSRIEGYNWVIKQQLKTNSTLCELVDCLDSRLKEEERWNQFYEYKQITTSNIVSTVG--QDLFLTITKVLDKYLTEPIYNIIRAEMSQCLFVNANIIN 593
BLAST of mRNA_P-wetherbeei_contig5438.2.1 vs. uniprot
Match: UPI000901282C (protein FAR1-RELATED SEQUENCE 7-like n=13 Tax=Ipomoea nil TaxID=35883 RepID=UPI000901282C) HSP 1 Score: 84.7 bits (208), Expect = 3.190e-13 Identity = 62/249 (24.90%), Postives = 108/249 (43.37%), Query Frame = 1
Query: 70 TDGSQFLDYLKGQQRMAFDWLYD---PVDRCIRCIIWATAAQIMASMKYSDVVLQDCTFGTNQFGILLCLFIGVD---CNMRYAV--LEREDTAGMIWAFEWFIHNCCPPGVHPVTWLTDGCAAAAAAIMKVCPSSHHFLCSWHLWKNIKHTDQRMRGESLLRDAIKTAFRKAEYSLSEASFRAAWGSLEKLLDVPAVPDQLRRYFARLYTDRGRWAFCYRSRAFTLSLSATSRVEGTFAALKRLLRGT 792
TD + ++ + +Q D+ +D +D + W + D+++ D T+ TN++ ++ F+G++ N+ + L E +W F+ F + P T +TD CAA AAAI KV P+S H LC WH+ +N K + +R D + Y+ +EA F+ W L V + +LY R +W + F+ + ++ R E T ++ R L T
Sbjct: 287 TDSNSLIEIFRRRQSTETDFFFDFELDLDARLCSFFWRDGQMRRDYEVFGDLLVHDTTYRTNKYDMICAPFVGMNHHCMNVMFGCGFLMNERIESFVWLFKVFSRSMGDKS--PQTIMTDQCAAMAAAISKVFPTSRHRLCIWHIGENSKKHIKTLRSNKDFLDMFNYVLK---YTETEAEFQFYWTRL-----VTDYKCHKNTWLEKLYDCREKWCPAFNKDYFSGGILSSQRSETTNHSISRRLSKT 525
BLAST of mRNA_P-wetherbeei_contig5438.2.1 vs. uniprot
Match: UPI000901AA63 (protein FAR1-RELATED SEQUENCE 7-like n=6 Tax=Ipomoea nil TaxID=35883 RepID=UPI000901AA63) HSP 1 Score: 83.6 bits (205), Expect = 6.870e-13 Identity = 60/249 (24.10%), Postives = 109/249 (43.78%), Query Frame = 1
Query: 70 TDGSQFLDYLKGQQRMAFDWLYD---PVDRCIRCIIWATAAQIMASMKYSDVVLQDCTFGTNQFGILLCLFIGVD---CNMRYAV--LEREDTAGMIWAFEWFIHNCCPPGVHPVTWLTDGCAAAAAAIMKVCPSSHHFLCSWHLWKNIKHTDQRMRGESLLRDAIKTAFRKAEYSLSEASFRAAWGSLEKLLDVPAVPDQLRRYFARLYTDRGRWAFCYRSRAFTLSLSATSRVEGTFAALKRLLRGT 792
TD + ++ K +Q D+ +D ++ + W + D+++ D T+ TN++ ++ F+G + N+ + L E +W F+ F+ + P + +TD CAA AAAI++V PSS H LC WH+ +N K + +R + D + Y+ +EA F W + V + +LY R +W + F+ + ++ R E T ++ R L T
Sbjct: 204 TDSNTLIEIFKRRQSSERDFYFDFEVDLESRLCSFFWRDGRMRRDYDLFGDLLVHDTTYRTNKYDMICGTFVGTNNHCMNVMFGCGFLMNEKIESFVWLFKTFLRSM--DYKSPQSIMTDQCAAMAAAIVQVFPSSRHRLCIWHIGENSKKHIKGLRNQKDFLDIFNCLLK---YTDTEAEFEFYWTRM-----VTTYKCHNNHWIEKLYGCREKWCLAFNKDYFSGGILSSQRSETTNHSISRRLSKT 442
BLAST of mRNA_P-wetherbeei_contig5438.2.1 vs. uniprot
Match: UPI0009017451 (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Ipomoea nil TaxID=35883 RepID=UPI0009017451) HSP 1 Score: 82.4 bits (202), Expect = 7.700e-13 Identity = 60/249 (24.10%), Postives = 110/249 (44.18%), Query Frame = 1
Query: 70 TDGSQFLDYLKGQQRMAFDWLYD---PVDRCIRCIIWATAAQIMASMKYSDVVLQDCTFGTNQFGILLCLFIGVD---CNMRYAV--LEREDTAGMIWAFEWFIHNCCPPGVHPVTWLTDGCAAAAAAIMKVCPSSHHFLCSWHLWKNIKHTDQRMRGESLLRDAIKTAFRKAEYSLSEASFRAAWGSLEKLLDVPAVPDQLRRYFARLYTDRGRWAFCYRSRAFTLSLSATSRVEGTFAALKRLLRGT 792
TD + ++ K +Q D+ +D ++ + W + D+++ D T+ TN++ ++ F+G++ N+ + L E +W F+ F+ + P + +TD CAA AAAI++V PSS H LC WH+ +N K + +R + D + Y+ +EA F W + V + +LY R +W + F+ + ++ R E T ++ R L T
Sbjct: 101 TDSNTLIEIFKRRQSSEIDFYFDFEVDLESRLCSFFWRDGRMRRDYDLFGDLLVHDTTYRTNKYDMICGPFVGMNNHCMNVMFGCGFLMNEKIESFVWLFKTFLRSM--DYKSPQSIMTDQCAAMAAAIVQVFPSSRHRLCIWHIGENSKKHIKGLRNQKDFLDIFNCLLK---YTDTEAEFEFYWTRM-----VTTYKCHNNHWIEKLYGCREKWCPAFSKDYFSGGILSSERSETTNHSISRRLSKT 339 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5438.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5438.2.1 >prot_P-wetherbeei_contig5438.2.1 ID=prot_P-wetherbeei_contig5438.2.1|Name=mRNA_P-wetherbeei_contig5438.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=627bp MYQVKNLINGVRATQKDLSTDGSQFLDYLKGQQRMAFDWLYDPVDRCIRCback to top mRNA from alignment at P-wetherbeei_contig5438:566..3237+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5438.2.1 ID=mRNA_P-wetherbeei_contig5438.2.1|Name=mRNA_P-wetherbeei_contig5438.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2672bp|location=Sequence derived from alignment at P-wetherbeei_contig5438:566..3237+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5438:566..3237+ >mRNA_P-wetherbeei_contig5438.2.1 ID=mRNA_P-wetherbeei_contig5438.2.1|Name=mRNA_P-wetherbeei_contig5438.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1881bp|location=Sequence derived from alignment at P-wetherbeei_contig5438:566..3237+ (Phaeothamnion wetherbeei SAG_119_79)back to top |