mRNA_P-wetherbeei_contig5393.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5393.1.1
Unique NamemRNA_P-wetherbeei_contig5393.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5393.1.1 vs. uniprot
Match: A0A835YXX3_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXX3_9STRA)

HSP 1 Score: 210 bits (534), Expect = 1.230e-65
Identity = 102/165 (61.82%), Postives = 128/165 (77.58%), Query Frame = 1
Query:   16 ELPSIGKVTKNGVKYFDFKAGDGPEPQWGQLVSISFVLYARTSPDGQLVKIDSSDANHEPYLFKHGNGRQIKGLEEGLHSMRVGGRRRIVIPPRLGYTVPGLGPFPASPWSRRNLNGMLEKLASRPGSGELVVDVELLTTIDDDADQGYYGDDSLTLEELQEVMR 510
            E  ++GK+TK+GVKYFD   G G + QWG++ SI F LY R + +G+L ++DSSD N EP+LFKHGNGRQIKGLEEG+H+MRVGG+RRI+IPP LGYTV GLGPFPA   SR  L+ ML+ L +   +G+LV+DVELL   DD+AD GYY D SL LEE+Q+VMR
Sbjct:   52 EAATVGKITKSGVKYFDAAEGSGDKIQWGKMCSIKFTLYGRPAQEGRLQRLDSSDNNGEPFLFKHGNGRQIKGLEEGMHTMRVGGKRRIIIPPTLGYTVSGLGPFPAGALSRMALDKMLDSLGT---NGQLVMDVELLDAFDDEADLGYYTDSSLNLEEMQDVMR 213          
BLAST of mRNA_P-wetherbeei_contig5393.1.1 vs. uniprot
Match: D7G8Q7_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Q7_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 1.590e-62
Identity = 97/174 (55.75%), Postives = 133/174 (76.44%), Query Frame = 1
Query:   13 DELPSIGKVTKNGVKYFDFKAGDGPEPQWGQLVSISFVLYARTSPDGQLVKIDSSDANHEPYLFKHGNGRQIKGLEEGLHSMRVGGRRRIVIPPRLGYTVPGLGPFPASPWSRRNLNGMLEKLASRPGSGELVVDVELLTTIDDDADQGYYGDDSLTLEELQEVMRKEEGREAG 534
            +E+P++GK+TK G+KYFDF+ G+GP P+WGQ   I F +Y R++PD +L+KI SSD N E YLFKHGNG QIKG+EEG+HSMRVGG+RR+++P  +GY+V GLGP+PA P  R  L  +L     +  +GELV+D+ELL   DD+ADQGYY D ++T E+LQ+++R E GR +G
Sbjct:  113 EEVPTVGKITKAGIKYFDFRVGEGPSPRWGQDCIIRFTMYGRSTPDEKLIKIQSSDNNKEKYLFKHGNGFQIKGMEEGMHSMRVGGKRRVIMPQSMGYSVQGLGPYPADPRKRDILVEVLTSF-EKTTTGELVMDIELLDAFDDEADQGYYEDTAVTPEQLQDIVR-ETGRFSG 284          
BLAST of mRNA_P-wetherbeei_contig5393.1.1 vs. uniprot
Match: A0A7S4NDU7_9STRA (Peptidylprolyl isomerase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NDU7_9STRA)

HSP 1 Score: 165 bits (417), Expect = 3.920e-47
Identity = 88/172 (51.16%), Postives = 120/172 (69.77%), Query Frame = 1
Query:   16 ELPSIGKVT----KNGVKYFDFKAGDGPEPQWGQLVSISFVLYARTSPD--GQLVKIDSSDANHEPYLFKHGNGRQIKGLEEGLHSMRVGGRRRIVIPPRLGYTVPGLGPFPASPWSRRNLNGMLEKLASRPGSGELVVDVELLTTIDDDADQGYYGDDSLTLEELQEVMRK 513
            E P+ G VT    K+G+KY + + G GP P++GQLVSIS+  Y +  PD  GQ  K+D  D++   YL KHGNGR I GL+EGLH+M++GG+RRI+IPP+LGY  PG+GP P  P +RR LN +L+K+    G G +V DVEL + +DD+ADQGYY D SL+ E+  + +RK
Sbjct:  116 EAPAGGGVTLFQTKSGLKYIELREGSGPTPRYGQLVSISYKAYVKL-PDIKGQTQKLDEFDSDRA-YLIKHGNGRTIPGLDEGLHTMKIGGKRRIIIPPKLGYVSPGVGPIPEGPLARRKLNSLLDKMIEVRG-GNVVFDVELRSAMDDEADQGYYEDGSLSPEDF-DTLRK 283          
BLAST of mRNA_P-wetherbeei_contig5393.1.1 vs. uniprot
Match: A0A8J2WWV0_9STRA (Peptidylprolyl isomerase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWV0_9STRA)

HSP 1 Score: 162 bits (409), Expect = 8.140e-47
Identity = 86/181 (47.51%), Postives = 117/181 (64.64%), Query Frame = 1
Query:    4 VASDELPSI--GKVTKNGVKYFDFKAGDGPEPQWGQLVSISFVLYARTSPDGQLVKIDSSDANHEPYLFKHGNGRQIKGLEEGLHSMRVGGRRRIVIPPRLGYTVPGLGPFPASPWSRRNLNGMLEKLASRPGSGELVVDVELLTTIDDDADQGYYGDDSLTLEELQEVMRKEEGREAGLS 540
            VA  ELP    G   KNG+K+ D   G G + +WGQ+V I +V Y R S D  L + D+SDA    YL +HGNGR ++GL+EG+H+MRVGG RR+ +PP LGYT PGLGP P S   RR L+  L+ +A +PG+  +V DV +L+   DDAD GYY D+S + +E+Q ++ K E    GL+
Sbjct:   50 VAVPELPQQPRGLKLKNGLKFTDGTVGPGEKLRWGQVVKIKYVAYTRESGDAPLKRYDASDA----YLVRHGNGRDVRGLDEGIHTMRVGGTRRVEVPPNLGYTAPGLGPMPESAGGRRTLDRALDDMAGKPGAA-VVYDVAVLSAWTDDADAGYYADESFSGDEIQVIVGKAEKIGRGLA 225          
BLAST of mRNA_P-wetherbeei_contig5393.1.1 vs. uniprot
Match: A0A4D9D9B5_9STRA (Peptidylprolyl isomerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9B5_9STRA)

HSP 1 Score: 157 bits (397), Expect = 6.240e-45
Identity = 83/181 (45.86%), Postives = 115/181 (63.54%), Query Frame = 1
Query:   16 ELPSIGKVTKNGVKYFDFKAGDGPEPQWGQLVSISFVLYARTSPDGQLVKIDSSDANHEPYLFKHGNGRQIKGLEEGLHSMRVGGRRRIVIPPRLGYTVPGLGPFPASPWSRRNLNGMLEKLASRPGSGELVVDVELLTTIDDDADQGYYGDDSLTLEELQEVMRK--EEGREAGLSVLSS 552
            +LP +   TK+G++Y+D + G+G  P+WGQ+  I +  Y R SP  +LV  D + A   PYL KHGNGR I+GL+EG+HSM++GG RRIV+P  LGYT  GLGP P + + R+ L   L K       GE++ DVEL++  DD+AD GYY D +     LQE M K  +E R+ G+ V S+
Sbjct:   29 DLPPVAFETKSGLRYYDVRKGEGMSPKWGQVAIIQYEGYVRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGIHSMKLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELGKAEVNDPPGEIIYDVELVSLYDDEADLGYYDDLTFDPGYLQEGMAKSLQELRDKGVKVPST 209          
BLAST of mRNA_P-wetherbeei_contig5393.1.1 vs. uniprot
Match: A0A6U1ZUH9_TRICV (Peptidylprolyl isomerase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A6U1ZUH9_TRICV)

HSP 1 Score: 153 bits (387), Expect = 6.500e-44
Identity = 76/154 (49.35%), Postives = 109/154 (70.78%), Query Frame = 1
Query:   40 TKNGVKYFDFKAGDGPEPQWGQLVSISFVLYARTSPD--GQLVKIDSSDANHEPYLFKHGNGRQIKGLEEGLHSMRVGGRRRIVIPPRLGYTVPGLGPFPASPWSRRNLNGMLEKLASRPGSGELVVDVELLTTIDDDADQGYYGDDSLTLEEL 495
            TK+G+KY + + G GP P++GQLVSIS+  Y +  PD  G+  K++  D++   YL KHGNGR + GL+EG+H+M++GG+RRI++ P+LGY  PGLGP P  P +R  LN +L+K+    G G +V DVEL T +DD+AD GYYGD S++ E+ 
Sbjct:   29 TKSGLKYIELREGSGPTPRYGQLVSISYKAYVKL-PDIKGKPSKLEEFDSDRG-YLIKHGNGRIVPGLDEGIHTMKLGGKRRIIVSPKLGYVEPGLGPIPEGPLARMRLNNLLDKMVEVRG-GNVVFDVELRTVMDDEADLGYYGDSSISPEDF 179          
BLAST of mRNA_P-wetherbeei_contig5393.1.1 vs. uniprot
Match: W7TQC7_9STRA (Peptidylprolyl isomerase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQC7_9STRA)

HSP 1 Score: 158 bits (399), Expect = 8.020e-44
Identity = 83/181 (45.86%), Postives = 116/181 (64.09%), Query Frame = 1
Query:   16 ELPSIGKVTKNGVKYFDFKAGDGPEPQWGQLVSISFVLYARTSPDGQLVKIDSSDANHEPYLFKHGNGRQIKGLEEGLHSMRVGGRRRIVIPPRLGYTVPGLGPFPASPWSRRNLNGMLEKLASRPGSGELVVDVELLTTIDDDADQGYYGDDSLTLEELQEVMRK--EEGREAGLSVLSS 552
            +LP++   TK+G++Y+D + G+G  P+WGQ+  I +  Y R SP  +LV  D + A   PYL KHGNGR I+GL+EG+HSM++GG RRIV+P  LGYT  GLGP P + + R+ L   L K       GE++ DVEL++  DD+AD GYY D +     LQE M K  +E R+ G+ V S+
Sbjct:  156 DLPAVAFETKSGLRYYDVRKGEGMSPKWGQVAIIQYEGYVRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGIHSMKLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELGKAEVNDPPGEIIYDVELVSLYDDEADLGYYDDLTFDPGYLQEGMAKSLQELRDKGVKVPST 336          
BLAST of mRNA_P-wetherbeei_contig5393.1.1 vs. uniprot
Match: A0A7S2HMU8_9STRA (Peptidylprolyl isomerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HMU8_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.040e-42
Identity = 78/164 (47.56%), Postives = 107/164 (65.24%), Query Frame = 1
Query:   16 ELPSIGKVTKNGVKYFDFKAGDGPEPQWGQLVSISFVLYARTSPDGQLVKIDSS-DANHEPYLFKHGNGRQIKGLEEGLHSMRVGGRRRIVIPPRLGYTVPGLGPFPASPWSRRNLNGMLEKLASRPGSGELVVDVELLTTIDDDADQGYYGDDSLTLEELQEV 504
            ELPS G  +K+G+KYFD++ G G  P++GQ++ + ++  A+ +   +L   DSS +     Y+ KHGNGR + GL+EG+H+MRVGG+RRI++PP LGYTVPGLGPFP     RR LN +L K+     SG +  DV L+   DDDAD GYY D  L    L +V
Sbjct:   81 ELPSSGFASKSGMKYFDYEVGPGSPPKYGQVIIVKYIASAKATGKEKLQIFDSSFERGGGDYIMKHGNGRCVLGLDEGIHTMRVGGKRRILVPPNLGYTVPGLGPFPPEAADRRILNKILAKMDD---SGYVAFDVMLIDAYDDDADAGYYDDTDLPPGVLDQV 241          
BLAST of mRNA_P-wetherbeei_contig5393.1.1 vs. uniprot
Match: A0A7S2S4W4_9STRA (Peptidylprolyl isomerase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S4W4_9STRA)

HSP 1 Score: 151 bits (382), Expect = 4.000e-42
Identity = 78/157 (49.68%), Postives = 108/157 (68.79%), Query Frame = 1
Query:   37 VTKNGVKYFDFKAGDGPE--PQWGQLVSISFVLYARTS-PDGQLVKIDSSDANHEPYLFKHGNGRQIKGLEEGLHSMRVGGRRRIVIPPRLGYTVPGLGPFPASPWSRRNLNGMLEKLASRPGSGELVVDVELLTTIDDDADQGYYGDDSLTLEELQ 498
             TK+G+KY + + GD     P++GQL+SIS+  Y + +  + +L K DS  A    Y+ KHGNGR I GLEEGLH+MRVGG+RR++IPP+LGY   GLGP P SP  R  LN +L+K+  + G G +++DVEL   ++D+ADQGYY D SLT E+ +
Sbjct:  103 TTKSGLKYIELREGDETNVPPRYGQLLSISYTSYVKLAGKEEKLQKYDSVPA----YVIKHGNGRTIPGLEEGLHTMRVGGKRRLIIPPKLGYVASGLGPLPVSPLGRYQLNNLLDKMVEQRG-GNVIIDVELRLAMNDEADQGYYDDSSLTPEQFK 254          
BLAST of mRNA_P-wetherbeei_contig5393.1.1 vs. uniprot
Match: A0A6U3SBH4_9STRA (Peptidylprolyl isomerase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SBH4_9STRA)

HSP 1 Score: 150 bits (379), Expect = 2.370e-41
Identity = 77/159 (48.43%), Postives = 108/159 (67.92%), Query Frame = 1
Query:   37 VTKNGVKYFDFKAGDGPEPQWGQLVSISFVLYAR----TSPDGQL-VKIDSSDANHEPYLFKHGNGRQIKGLEEGLHSMRVGGRRRIVIPPRLGYTVPGLGPFPASPWSRRNLNGMLEKLASRPGSGELVVDVELLTTIDDDADQGYYGDDSLTLEELQ 498
             TK+G+KY + + G GP P++GQL SIS+  Y +     S D ++  K+   D+++  +L KHGNGR + GL+EGLH++RVGG+RRI++PP+LG+   GLGP P +PW R  LN +L ++    G G LV DVEL +  DD+ADQGYY D SLT E+ Q
Sbjct:  131 TTKSGLKYIELREGTGPTPKYGQLCSISYKAYIKLPDSVSSDKKISTKLQEFDSDNA-FLVKHGNGRILPGLDEGLHTIRVGGKRRIIVPPKLGFVSNGLGPLPETPWGRYKLNQLLNQMVEVKG-GNLVFDVELRSAFDDEADQGYYEDRSLTPEQFQ 287          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5393.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YXX3_9STRA1.230e-6561.82Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
D7G8Q7_ECTSI1.590e-6255.75Peptidylprolyl isomerase n=1 Tax=Ectocarpus silicu... [more]
A0A7S4NDU7_9STRA3.920e-4751.16Peptidylprolyl isomerase n=1 Tax=Odontella aurita ... [more]
A0A8J2WWV0_9STRA8.140e-4747.51Peptidylprolyl isomerase n=2 Tax=Pelagomonas calce... [more]
A0A4D9D9B5_9STRA6.240e-4545.86Peptidylprolyl isomerase n=1 Tax=Nannochloropsis s... [more]
A0A6U1ZUH9_TRICV6.500e-4449.35Peptidylprolyl isomerase n=1 Tax=Trieres chinensis... [more]
W7TQC7_9STRA8.020e-4445.86Peptidylprolyl isomerase n=1 Tax=Nannochloropsis g... [more]
A0A7S2HMU8_9STRA1.040e-4247.56Peptidylprolyl isomerase n=1 Tax=Dictyocha speculu... [more]
A0A7S2S4W4_9STRA4.000e-4249.68Peptidylprolyl isomerase n=1 Tax=Eucampia antarcti... [more]
A0A6U3SBH4_9STRA2.370e-4148.43Peptidylprolyl isomerase n=1 Tax=Ditylum brightwel... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5393contigP-wetherbeei_contig5393:1019..1570 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G8Q7
PFAMsFKBP_C
Model size552
Max annot lvl2759|Eukaryota
KEGG koko:K01802
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009532,GO:0009534,GO:0009536,GO:0009543,GO:0009570,GO:0009579,GO:0031976,GO:0031977,GO:0031978,GO:0031984,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464
Exons1
Evalue2.61e-63
EggNOG OGsCOG0545@1|root,KOG0552@2759|Eukaryota
Ec32 ortholog descriptionFKBP domain protein
Ec32 orthologEc-22_002640.1
EC5.2.1.8
Descriptionhistone peptidyl-prolyl isomerization
Cds size552
COG categoryO
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186805.9515722-CDS-P-wetherbeei_contig5393:1018..15701683186805.9515722-CDS-P-wetherbeei_contig5393:1018..1570Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5393 1019..1570 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5393.1.1prot_P-wetherbeei_contig5393.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5393 1019..1570 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5393.1.1

>prot_P-wetherbeei_contig5393.1.1 ID=prot_P-wetherbeei_contig5393.1.1|Name=mRNA_P-wetherbeei_contig5393.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=184bp
AVASDELPSIGKVTKNGVKYFDFKAGDGPEPQWGQLVSISFVLYARTSPD
GQLVKIDSSDANHEPYLFKHGNGRQIKGLEEGLHSMRVGGRRRIVIPPRL
GYTVPGLGPFPASPWSRRNLNGMLEKLASRPGSGELVVDVELLTTIDDDA
DQGYYGDDSLTLEELQEVMRKEEGREAGLSVLSS
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mRNA from alignment at P-wetherbeei_contig5393:1019..1570+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5393.1.1 ID=mRNA_P-wetherbeei_contig5393.1.1|Name=mRNA_P-wetherbeei_contig5393.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=552bp|location=Sequence derived from alignment at P-wetherbeei_contig5393:1019..1570+ (Phaeothamnion wetherbeei SAG_119_79)
GCGGTAGCTTCGGATGAACTCCCGAGCATAGGAAAGGTGACGAAGAACGG CGTCAAATACTTTGACTTCAAGGCGGGAGACGGCCCCGAGCCGCAGTGGG GCCAGCTCGTCAGCATATCCTTCGTACTCTACGCCCGCACCTCACCCGAC GGCCAGCTGGTGAAGATTGACTCGTCCGACGCGAACCACGAGCCGTACCT CTTCAAGCACGGCAACGGGCGGCAGATCAAAGGGCTCGAGGAGGGCCTCC ACAGCATGCGCGTCGGCGGCCGGCGGCGCATCGTCATCCCACCGCGGCTC GGCTACACCGTCCCCGGGCTGGGGCCGTTCCCGGCGAGCCCTTGGAGCCG GCGGAACCTAAACGGCATGCTGGAAAAGCTGGCATCTCGCCCTGGCAGCG GCGAGCTGGTCGTAGACGTGGAGCTGCTGACGACCATCGACGACGACGCC GACCAAGGATACTACGGGGACGACTCGCTGACGCTGGAGGAACTACAGGA GGTGATGAGAAAGGAGGAAGGAAGAGAAGCTGGGCTTTCAGTTTTGTCAA GC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5393:1019..1570+

>mRNA_P-wetherbeei_contig5393.1.1 ID=mRNA_P-wetherbeei_contig5393.1.1|Name=mRNA_P-wetherbeei_contig5393.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=552bp|location=Sequence derived from alignment at P-wetherbeei_contig5393:1019..1570+ (Phaeothamnion wetherbeei SAG_119_79)
GCGGTAGCTTCGGATGAACTCCCGAGCATAGGAAAGGTGACGAAGAACGG
CGTCAAATACTTTGACTTCAAGGCGGGAGACGGCCCCGAGCCGCAGTGGG
GCCAGCTCGTCAGCATATCCTTCGTACTCTACGCCCGCACCTCACCCGAC
GGCCAGCTGGTGAAGATTGACTCGTCCGACGCGAACCACGAGCCGTACCT
CTTCAAGCACGGCAACGGGCGGCAGATCAAAGGGCTCGAGGAGGGCCTCC
ACAGCATGCGCGTCGGCGGCCGGCGGCGCATCGTCATCCCACCGCGGCTC
GGCTACACCGTCCCCGGGCTGGGGCCGTTCCCGGCGAGCCCTTGGAGCCG
GCGGAACCTAAACGGCATGCTGGAAAAGCTGGCATCTCGCCCTGGCAGCG
GCGAGCTGGTCGTAGACGTGGAGCTGCTGACGACCATCGACGACGACGCC
GACCAAGGATACTACGGGGACGACTCGCTGACGCTGGAGGAACTACAGGA
GGTGATGAGAAAGGAGGAAGGAAGAGAAGCTGGGCTTTCAGTTTTGTCAA
GC
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