mRNA_P-wetherbeei_contig5370.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5370.1.1
Unique NamemRNA_P-wetherbeei_contig5370.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig5370.1.1 vs. uniprot
Match: A0A7S3Y6C6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6C6_HETAK)

HSP 1 Score: 199 bits (507), Expect = 4.030e-59
Identity = 175/249 (70.28%), Postives = 204/249 (81.93%), Query Frame = 1 
Query:   13 MDLTKEALKKACRENDLYSTPSLNDRLYLHYKGIRRIENLEEYTALRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAEDVRHILQCPSLQTLDLQHNHIEDPAVMDVVAAVPGLRVLYLMGNPIIKVIKHYRKTIVSRCSGLKYLDDRPVFDDERMRCTAWARGFAAGG-VDAANTAERAEIVRLRDEKRGEDERQHHAFE 756
            M++TK  LKK CR+ND Y  P LND+LYLHYKG R I+NL+EY  L+V+WLEG    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTA+    +L+ PSL+TLD+QHN I+D  ++DVV  +P LRVLYL GNP++K ++HYRK++VS C  L+YLDDRPVF+DER R  AWARGF AGG +DAAN AER EI R+R+EKR  +ER   A E
Sbjct:   11 MEITKPYLKKLCRDNDGYGVPELNDKLYLHYKGFRCIQNLDEYINLKVIWLEGNGLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTADXXXXVLEVPSLETLDIQHNKIDDVGIVDVVTTMPNLRVLYLQGNPVVKDVRHYRKSLVSGCRELRYLDDRPVFEDERRRTDAWARGFRAGGTLDAANAAEREEIRRVREEKRCAEERNFLAME 259
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BLAST of mRNA_P-wetherbeei_contig5370.1.1 vs. uniprot
Match: D7FN44_ECTSI (Outer row dynein assembly protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN44_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 6.760e-59
Identity = 141/248 (56.85%), Postives = 169/248 (68.15%), Query Frame = 1 
Query:   13 MDLTKEALKKACRENDLYSTPSLNDRLYLHYKGIRRIENLEEYTALRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAEDVRHILQCPSLQTLDLQHNHIEDPAVMDVVAAVPGLRVLYLMGNPIIKVIKHYRKTIVSRCSGLKYLDDRPVFDDERMRCTAWARGFAAGGVDAANTAERAEIVRLRDEKRGEDERQHHAFE 756
            MDLTK  LKK CR++ LYS+PSLND+LYLHYKGIR+I+NLEEYT LRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                    L+TLD+QHN I DP V+D+V+A+  LRVLYL GNP++K I+HYRKT+VS+C+ LKYLDDRPVFDDER RC AW++G A GG+  A  AER E+ ++R+ KR  ++RQ+ AFE
Sbjct:    1 MDLTKAVLKKICRDSGLYSSPSLNDKLYLHYKGIRQIQNLEEYTGLRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSF-------------------------------------------------LETLDVQHNRINDPDVVDIVSAMHDLRVLYLQGNPVVKSIRHYRKTLVSKCATLKYLDDRPVFDDERCRCAAWSKGMAEGGISRAQEAEREEMAKIRESKRAAEQRQYLAFE 199
[Close]
BLAST of mRNA_P-wetherbeei_contig5370.1.1 vs. uniprot
Match: T0QTZ5_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QTZ5_SAPDV)

HSP 1 Score: 187 bits (475), Expect = 1.050e-53
Identity = 176/250 (70.40%), Postives = 202/250 (80.80%), Query Frame = 1 
Query:   13 MDLTKEALKKACRENDLYSTPSLNDRLYLHYKGIRRIENLEEYTALRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAEDVRHILQCPSLQTLDLQHNHIEDPAVMDVVAAVPGLRVLYLMGNPIIKVIKHYRKTIVSRCSGLKYLDDRPVFDDERMRCTAWARGFAA--GGVDAANTAERAEIVRLRDEKRGEDERQHHAFE 756
            +++ KE+L+K C++ DLYSTPS+NDRLYLHYKG RRIENLE YT L+VLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       +L+ P+L  LD+Q N I D  V+D++AA+P LRVLYL GN ++K IKHYRKTI+SRC  L+YLDDRPVFD+ER R TAW R      G VDAA  AERAE+  +R EK+ +DE     FE
Sbjct:    2 LEMNKESLRKICKDLDLYSTPSINDRLYLHYKGFRRIENLEAYTELKVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLELPTLAVLDIQSNRIADVDVVDILAAMPNLRVLYLQGNDVVKHIKHYRKTIISRCKELRYLDDRPVFDEERRRVTAWGRVMEETNGDVDAALEAERAELALIRQEKKDKDEANFRYFE 251
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BLAST of mRNA_P-wetherbeei_contig5370.1.1 vs. uniprot
Match: A0A024TEQ5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TEQ5_9STRA)

HSP 1 Score: 181 bits (459), Expect = 3.060e-51
Identity = 172/250 (68.80%), Postives = 198/250 (79.20%), Query Frame = 1 
Query:   13 MDLTKEALKKACRENDLYSTPSLNDRLYLHYKGIRRIENLEEYTALRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAEDVRHILQCPSLQTLDLQHNHIEDPAVMDVVAAVPGLRVLYLMGNPIIKVIKHYRKTIVSRCSGLKYLDDRPVFDDERMRCTAWARGFAA--GGVDAANTAERAEIVRLRDEKRGEDERQHHAFE 756
            M++ K  L+K C++ DLYSTPS+NDRLYLHYKG RRIENLEEYT ++V+WLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        LQ PSL  LD+Q N I DPAV+D++A +P LRVLYL GN ++K IK YRKT+V+RC  L+YLDDRPVFDDER R  AW +      G ++AA  AER E+  +R EK+ +DE     FE
Sbjct:    1 MEMNKATLRKICKDLDLYSTPSINDRLYLHYKGFRRIENLEEYTNVKVIWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQIPSLSVLDIQSNRIADPAVLDILAQMPNLRVLYLQGNDVVKHIKQYRKTVVARCKNLRYLDDRPVFDDERRRVNAWYKALEETNGDMEAALQAERDELAVIRQEKKDKDEANFRYFE 250
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BLAST of mRNA_P-wetherbeei_contig5370.1.1 vs. uniprot
Match: A0A3L6V2M5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V2M5_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.990e-50
Identity = 171/248 (68.95%), Postives = 194/248 (78.23%), Query Frame = 1 
Query:   19 LTKEALKKACRENDLYSTPSLNDRLYLHYKGIRRIENLEEYTALRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAEDVRHILQCPSLQTLDLQHNHIEDPAVMDVVAAVPGLRVLYLMGNPIIKVIKHYRKTIVSRCSGLKYLDDRPVFDDERMRCTAWARGF--AAGGVDAANTAERAEIVRLRDEKRGEDERQHHAFE 756
            + K  L+K C++ DLYSTPS+NDRLYLHYKG RRIENLEEYT ++V+WLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           PSL  LD+Q N I DPAV+DV+A +P LRVLYL GN ++K IK YRKT+V+RC  L+YLDDRPVFDDER R  AW +      G +DAA  AER E+  +R EK+ +DE     FE
Sbjct:    1 MNKATLRKICKDLDLYSTPSINDRLYLHYKGFRRIENLEEYTNVKVIWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSLSVLDIQSNRIADPAVVDVLAQMPNLRVLYLQGNDVVKHIKQYRKTVVARCKNLRYLDDRPVFDDERRRVNAWYKVLENTNGDMDAALQAERDELAVIRQEKKDKDEANFRYFE 248
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BLAST of mRNA_P-wetherbeei_contig5370.1.1 vs. uniprot
Match: A0A482SU75_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SU75_9ARCH)

HSP 1 Score: 177 bits (448), Expect = 1.740e-49
Identity = 163/225 (72.44%), Postives = 188/225 (83.56%), Query Frame = 1 
Query:   16 DLTKEALKKACRENDLYSTPSLNDRLYLHYKGIRRIENLEEYTALRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAEDVRHILQCPSLQTLDLQHNHIEDPAVMDVVAAVPGLRVLYLMGNPIIKVIKHYRKTIVSRCSGLKYLDDRPVFDDERMRCTAWARGFAAGGV-DAANTAE 687
            ++TKE L+K C+EN LY+TPS+ND+LYLHYKG   I+NL+ YT L+ LWLEG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       +L  PSLQTLDLQHN I+DPA++D+VA +P LRVLYLMGNP++K I++YRKT+++RC  LKYLDDRPVF+DER R  AWA+    GG  D A  AE
Sbjct:    3 EMTKEVLRKLCKENGLYTTPSINDKLYLHYKGFHVIQNLDSYTGLKALWLEGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLDLPSLQTLDLQHNKIDDPAIIDIVAQIPDLRVLYLMGNPVVKSIRNYRKTLIARCKLLKYLDDRPVFEDERRRVDAWAKVLDNGGTQDEAQEAE 227
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BLAST of mRNA_P-wetherbeei_contig5370.1.1 vs. uniprot
Match: A0A1V9YZD4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YZD4_9STRA)

HSP 1 Score: 175 bits (444), Expect = 3.880e-49
Identity = 170/250 (68.00%), Postives = 198/250 (79.20%), Query Frame = 1 
Query:   13 MDLTKEALKKACRENDLYSTPSLNDRLYLHYKGIRRIENLEEYTALRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAEDVRHILQCPSLQTLDLQHNHIEDPAVMDVVAAVPGLRVLYLMGNPIIKVIKHYRKTIVSRCSGLKYLDDRPVFDDERMRCTAWARGFAA--GGVDAANTAERAEIVRLRDEKRGEDERQHHAFE 756
            +++ KE+L+K C+E DLY+TP++NDRLYLHYKG RRI+NLE+YT L+VLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        L+ PSL  LD+Q N I D  V+DV+A +  LRVLYL GN ++K IK YRKTI+ RC  L+YLDDRPVFD+ER R TAW R      G ++AA  AERAE+  +R EK+ +DE     FE
Sbjct:    2 LEMNKESLRKICKELDLYTTPNINDRLYLHYKGFRRIQNLEDYTELKVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEIPSLAVLDIQSNRINDATVVDVLAQMTNLRVLYLQGNDVVKHIKQYRKTIIYRCKELRYLDDRPVFDEERRRVTAWGRAMEETNGDLEAALEAERAELAVIRQEKKDKDEANFRYFE 251
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BLAST of mRNA_P-wetherbeei_contig5370.1.1 vs. uniprot
Match: A0A397EJM6_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EJM6_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.120e-48
Identity = 171/248 (68.95%), Postives = 194/248 (78.23%), Query Frame = 1 
Query:   19 LTKEALKKACRENDLYSTPSLNDRLYLHYKGIRRIENLEEYTALRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAEDVRHILQCPSLQTLDLQHNHIEDPAVMDVVAAVPGLRVLYLMGNPIIKVIKHYRKTIVSRCSGLKYLDDRPVFDDERMRCTAWARGF--AAGGVDAANTAERAEIVRLRDEKRGEDERQHHAFE 756
            + K  L+K C++ DLYSTPS+NDRLYLHYKG RRIENLEEYT ++V+WLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           PSL  LD+Q N I DPAV+DV+A +P LRVLYL GN ++K IK YRKT+V+RC  L+YLDDRPVFDDER R  AW +      G +DAA  AER E+  +R EK+ +DE     FE
Sbjct:    1 MNKATLRKICKDLDLYSTPSINDRLYLHYKGFRRIENLEEYTNVKVIWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSLSVLDIQSNRIADPAVVDVLAQMPNLRVLYLQGNDVVKHIKQYRKTVVARCKNLRYLDDRPVFDDERRRVNAWYKVLEDTNGDMDAALQAERDELAVIRQEKKDKDEANFRYFE 248
[Close]
BLAST of mRNA_P-wetherbeei_contig5370.1.1 vs. uniprot
Match: A0A2R5GSR0_9STRA (Dynein assembly factor 1, axonemal n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GSR0_9STRA)

HSP 1 Score: 173 bits (439), Expect = 1.490e-47
Identity = 166/248 (66.94%), Postives = 194/248 (78.23%), Query Frame = 1 
Query:   13 MDLTKEALKKACRENDLYSTPSLNDRLYLHYKGIRRIENLEEYTALRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAEDVRHILQCPSLQTLDLQHNHIEDPAVMDVVAAVPGLRVLYLMGNPIIKVIKHYRKTIVSRCSGLKYLDDRPVFDDERMRCTAWARGFAAGGVDAANTAERAEIVRLRDEKRGEDERQHHAFE 756
            +D+TK AL+++C +N LY TP LND+LYLHYKG +RIENL+EYT L+VLWLEG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       + + P L  LD+Q N IEDPA++DV+     L VLYL GNP +K I+ YRKT ++R   LKYLDDRPVF +ER+R  AW RG A G V+AA   E+AE+ R R EK+ ++E    AFE
Sbjct:    4 VDMTKLALRESCEKNKLYRTPRLNDKLYLHYKGWKRIENLDEYTGLKVLWLEGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTKLPELSCLDIQKNKIEDPAILDVLERCEKLSVLYLQGNPCVKKIRFYRKTTIARLKSLKYLDDRPVFPEERLRAEAWCRGLAEGSVEAARACEKAELDRQRKEKQEKEEANFRAFE 251
[Close]
BLAST of mRNA_P-wetherbeei_contig5370.1.1 vs. uniprot
Match: A0A7S0K1K9_CAFRO (Hypothetical protein (Fragment) n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0K1K9_CAFRO)

HSP 1 Score: 167 bits (424), Expect = 3.620e-47
Identity = 167/248 (67.34%), Postives = 192/248 (77.42%), Query Frame = 1 
Query:   13 MDLTKEALKKACRENDLYSTPSLNDRLYLHYKGIRRIENLEEYTALRVLWLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAEDVRHILQCPSLQTLDLQHNHIEDPAVMDVVAAVPGLRVLYLMGNPIIKVIKHYRKTIVSRCSGLKYLDDRPVFDDERMRCTAWARGFAAGGVDAANTAERAEIVRLRDEKRGEDERQHHAFE 756
            M++T  A+KK C++   Y T  LND LYLH+KG  +IENLE YT L+V     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TAED+R +   P+L  LDL+ N I+DPAV+DV+AA+P LRVLYL GNP++K I+HYRKT++SR  GL++LDDRPVFD+ER R TAWA G  AGG   A   ERA I   +   R  DER   AFE
Sbjct:    5 MEMTPGAIKKICQDCKGYGTAYLNDVLYLHHKGFAKIENLEPYTGLKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETAEDIRAVADLPALACLDLKGNIIDDPAVLDVLAAMPSLRVLYLQGNPVVKRIRHYRKTVISRLEGLRFLDDRPVFDEERERVTAWAAGMKAGGSKEAAARERATIAAQKQRAREADERNFRAFE 252
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5370.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y6C6_HETAK4.030e-5970.28Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
D7FN44_ECTSI6.760e-5956.85Outer row dynein assembly protein n=1 Tax=Ectocarp... [more]
T0QTZ5_SAPDV1.050e-5370.40Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A024TEQ5_9STRA3.060e-5168.80Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A3L6V2M5_9STRA1.990e-5068.95Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A482SU75_9ARCH1.740e-4972.44Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A1V9YZD4_9STRA3.880e-4968.00Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A397EJM6_9STRA1.120e-4868.95Uncharacterized protein n=9 Tax=Aphanomyces astaci... [more]
A0A2R5GSR0_9STRA1.490e-4766.94Dynein assembly factor 1, axonemal n=1 Tax=Hondaea... [more]
A0A7S0K1K9_CAFRO3.620e-4767.34Hypothetical protein (Fragment) n=2 Tax=Cafeteria ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5370contigP-wetherbeei_contig5370:1265..3181 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FN44
Preferred nameODA7
PFAMsLRR_4,LRR_8,LRR_9
Model size756
Max annot lvl2759|Eukaryota
KEGG koko:K19750
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0001578,GO:0003341,GO:0003352,GO:0003356,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0008104,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0032879,GO:0032886,GO:0033036,GO:0033365,GO:0034613,GO:0034622,GO:0035082,GO:0040012,GO:0040017,GO:0043933,GO:0044085,GO:0044297,GO:0044424,GO:0044464,GO:0044782,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051179,GO:0051270,GO:0051272,GO:0051641,GO:0060271,GO:0060632,GO:0065003,GO:0065007,GO:0070286,GO:0070727,GO:0070925,GO:0071840,GO:0120031,GO:0120036,GO:1902019,GO:2000145,GO:2000147,GO:2000155
Exons6
Evalue9.64e-60
EggNOG OGs2CMIN@1|root,2QQFE@2759|Eukaryota
Descriptiondynein complex binding
Cds size744
COG categoryS
BRITEko00000,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5370.1.1prot_P-wetherbeei_contig5370.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5370 1277..3181 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186803.1082788-UTR-P-wetherbeei_contig5370:1264..12761683186803.1082788-UTR-P-wetherbeei_contig5370:1264..1276Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5370 1265..1276 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186803.123922-CDS-P-wetherbeei_contig5370:1276..13721683186803.123922-CDS-P-wetherbeei_contig5370:1276..1372Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5370 1277..1372 +
1683186803.1347635-CDS-P-wetherbeei_contig5370:1607..17721683186803.1347635-CDS-P-wetherbeei_contig5370:1607..1772Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5370 1608..1772 +
1683186803.143482-CDS-P-wetherbeei_contig5370:1881..19111683186803.143482-CDS-P-wetherbeei_contig5370:1881..1911Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5370 1882..1911 +
1683186803.1514096-CDS-P-wetherbeei_contig5370:2122..22451683186803.1514096-CDS-P-wetherbeei_contig5370:2122..2245Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5370 2123..2245 +
1683186803.159383-CDS-P-wetherbeei_contig5370:2492..26651683186803.159383-CDS-P-wetherbeei_contig5370:2492..2665Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5370 2493..2665 +
1683186803.1697521-CDS-P-wetherbeei_contig5370:3024..31811683186803.1697521-CDS-P-wetherbeei_contig5370:3024..3181Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5370 3025..3181 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5370.1.1

>prot_P-wetherbeei_contig5370.1.1 ID=prot_P-wetherbeei_contig5370.1.1|Name=mRNA_P-wetherbeei_contig5370.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=248bp
MDLTKEALKKACRENDLYSTPSLNDRLYLHYKGIRRIENLEEYTALRVLW
LEGNGLAKIEGLDHQAQLRTLYLHENLIEKIENIDALVDLDTLNLTRNYI
KKIEGLDNLPKLTTLLLGHNILKTAEDVRHILQCPSLQTLDLQHNHIEDP
AVMDVVAAVPGLRVLYLMGNPIIKVIKHYRKTIVSRCSGLKYLDDRPVFD
DERMRCTAWARGFAAGGVDAANTAERAEIVRLRDEKRGEDERQHHAFE
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mRNA from alignment at P-wetherbeei_contig5370:1265..3181+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5370.1.1 ID=mRNA_P-wetherbeei_contig5370.1.1|Name=mRNA_P-wetherbeei_contig5370.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1917bp|location=Sequence derived from alignment at P-wetherbeei_contig5370:1265..3181+ (Phaeothamnion wetherbeei SAG_119_79)
CCATTCTGTACCATGGACCTCACGAAGGAAGCCCTAAAGAAGGCGTGCAG
GGAAAATGACCTGTATTCGACGCCTTCGCTCAACGATCGGCTCTACCTGC
ACTATAAGGTGAGGCTTCATCAGTTTAGTATCTTTCATTATTAAAGCTCC
TGGCTGAGCGTTTTACGTAAGGGTCGAGTGCAGAAATTGGTGCCATCACC
TAGCCGCCGAAAGGCAGCAGGTCCGCAACAGTCTCACCAGCCTCAACAGC
GACTGAAAGTATCGTTCTTTCCTTTCTCGTCCCTTCCTCCGGTCCTGCGC
TGCTGACGCCCTTCCTTCTTCACCAAACCTTTCTTTCGCGCAGGGTATCC
GGCGTATTGAGAACCTCGAAGAATACACAGCATTGCGTGTCCTCTGGCTC
GAGGGCAACGGCTTGGCGAAGATCGAGGGCTTGGACCACCAAGCGCAGCT
CCGAACGCTGTACCTCCACGAAAACCTCATCGAGAAGATCGAAAATATCG
ATGCGCTGGTAATTGCAGAGCCGAAAAGAGGGGGAGAGATTGAAAACCGA
CCTATTTGCAGAGCTAATGCATTCTGTTGATTCCTTCCGCTGTTTTCTCT
GAATGCCTCCTCCACAGGTCGACCTGGACACTCTAAATCTGACTCGGGTG
AGGATAAAATTTTGTACTTTTCTGAACGGTCATGTTGCTATCGGCGTGTC
CCAAAATGGTCACCCATCTACCCTTTTTCCACAATGTTTGCATGTCCGCT
TCTTTTGAATACCACACCGCGAGCGCTTACCGCCTTCTCCTCCAAACCAT
CTCTCCGCGTGGGCGGGTTGCATGAAATCTTTTCGTTCTGCTGCGCGCCG
TGGAGCAGAACTACATAAAGAAGATCGAGGGCCTCGACAACTTGCCGAAG
CTCACCACGCTGCTGCTCGGCCACAACATCCTGAAGACGGCCGAAGACGT
CCGCCACATCCTGCAATGTCCCAGCCTCCAGGTGGCGTTGTTGTTGCCCC
TTGTTGATACCAGCCGCCCGCCACTGACAAACGCTGACGCTCGGTTTTCT
AGCATACGCTGCCGGCCCCGGTGGAGCTTTGTTGCATGTCTCCCTGTGCC
GTTCGCTCAACTCTACCTCCCACGCACACAGAGGTCGTCCCCTTCTGAGA
TCTCTATTTGTTGCACATGTTGGCGAATTTCGTTTGATTATTTTCTGCAA
ACTTTACCATTACTCCACCTGCCCGCAGACGCTGGACTTGCAGCACAACC
ACATCGAAGACCCCGCTGTGATGGACGTCGTGGCGGCAGTGCCCGGGCTG
CGGGTGCTCTACCTGATGGGTAACCCGATCATCAAGGTGATCAAGCACTA
CCGCAAGACCATTGTCAGCCGCTGCTCGGGCCTCAAGTACCTCGACGACA
GGCGAGTGTCTTTTATCGTACGGCGGGCGGGAGAGAATGCTAATCGAGGA
CGGTCGGCGGAGGCTTCGAGCGGCCGGCGGTTTGTGCTGCTCCATTGATG
CTCTATGCCGCATGGCTGCGTTACAGCATTGCTGCGTTACAGCATTGCTG
CGTTGCAGCTTGCTGCGTCCTTAACCCTTATGTGCCTGCCCACTGCGGAA
CGATGCCTCTATGGAAACGTTATATATGCAAATCGCCGTCATACTGCAAT
GACGCTGCGGCCTTCTCCCGGCAGCGCCTACTCCGGCCACAGCCACTCTT
ACCACCGCCGTGCCGTCGCTCGCCGCCGTCTAAACCCAAGCGGCCGCCGC
CTTTTTGCAGGCCCGTGTTTGATGACGAGCGCATGCGGTGCACGGCGTGG
GCGCGGGGCTTCGCGGCAGGCGGCGTCGATGCGGCGAACACGGCGGAGCG
CGCCGAGATCGTCCGGCTGCGGGACGAGAAGCGCGGCGAGGACGAGCGGC
AGCACCACGCCTTCGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5370:1265..3181+

>mRNA_P-wetherbeei_contig5370.1.1 ID=mRNA_P-wetherbeei_contig5370.1.1|Name=mRNA_P-wetherbeei_contig5370.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=744bp|location=Sequence derived from alignment at P-wetherbeei_contig5370:1265..3181+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGACCTCACGAAGGAAGCCCTAAAGAAGGCGTGCAGGGAAAATGACCT
GTATTCGACGCCTTCGCTCAACGATCGGCTCTACCTGCACTATAAGGGTA
TCCGGCGTATTGAGAACCTCGAAGAATACACAGCATTGCGTGTCCTCTGG
CTCGAGGGCAACGGCTTGGCGAAGATCGAGGGCTTGGACCACCAAGCGCA
GCTCCGAACGCTGTACCTCCACGAAAACCTCATCGAGAAGATCGAAAATA
TCGATGCGCTGGTCGACCTGGACACTCTAAATCTGACTCGGAACTACATA
AAGAAGATCGAGGGCCTCGACAACTTGCCGAAGCTCACCACGCTGCTGCT
CGGCCACAACATCCTGAAGACGGCCGAAGACGTCCGCCACATCCTGCAAT
GTCCCAGCCTCCAGACGCTGGACTTGCAGCACAACCACATCGAAGACCCC
GCTGTGATGGACGTCGTGGCGGCAGTGCCCGGGCTGCGGGTGCTCTACCT
GATGGGTAACCCGATCATCAAGGTGATCAAGCACTACCGCAAGACCATTG
TCAGCCGCTGCTCGGGCCTCAAGTACCTCGACGACAGGCCCGTGTTTGAT
GACGAGCGCATGCGGTGCACGGCGTGGGCGCGGGGCTTCGCGGCAGGCGG
CGTCGATGCGGCGAACACGGCGGAGCGCGCCGAGATCGTCCGGCTGCGGG
ACGAGAAGCGCGGCGAGGACGAGCGGCAGCACCACGCCTTCGAG
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