mRNA_P-wetherbeei_contig53637.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig53637.1.1 vs. uniprot
Match: UPI001CBDE544 (DUF2183 domain-containing protein n=1 Tax=Marinicella sp. NBU2979 TaxID=2873263 RepID=UPI001CBDE544) HSP 1 Score: 77.8 bits (190), Expect = 1.950e-15 Identity = 38/56 (67.86%), Postives = 43/56 (76.79%), Query Frame = 1
Query: 13 ETKPPQIEAILSRYRQRRFILIGDSGEDDPEIYSAAFRARPNQIERIYIRNVTAAR 180
ETKPPQI+AIL RY QR+FIL+GDSGE DPEIY+ R P QI+ I IRNVT R
Sbjct: 274 ETKPPQIKAILQRYPQRQFILVGDSGEYDPEIYADIQRQFPEQIKHILIRNVTGER 329
BLAST of mRNA_P-wetherbeei_contig53637.1.1 vs. uniprot
Match: A0A7S2WEM5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WEM5_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 8.600e-15 Identity = 31/56 (55.36%), Postives = 41/56 (73.21%), Query Frame = 1
Query: 1 RPGRETKPPQIEAILSRYRQRRFILIGDSGEDDPEIYSAAFRARPNQIERIYIRNV 168
RP TKP +IE I+ + +RRFIL+GDSGE DPEIY+ R +P Q++R+YIR V
Sbjct: 4 RPAPRTKPAKIEKIMEAFPERRFILVGDSGEKDPEIYAYICRIKPEQVDRVYIRRV 59
BLAST of mRNA_P-wetherbeei_contig53637.1.1 vs. uniprot
Match: A0A853IGT7_9GAMM (DUF2183 domain-containing protein n=1 Tax=Endozoicomonas sp. SM1973 TaxID=2751884 RepID=A0A853IGT7_9GAMM) HSP 1 Score: 72.0 bits (175), Expect = 2.590e-13 Identity = 33/54 (61.11%), Postives = 39/54 (72.22%), Query Frame = 1
Query: 7 GRETKPPQIEAILSRYRQRRFILIGDSGEDDPEIYSAAFRARPNQIERIYIRNV 168
G ETKP QIEAIL Y +R+FIL+GDSGE DPE+Y R P QI + +IRNV
Sbjct: 288 GTETKPQQIEAILKVYPKRKFILVGDSGEQDPEVYGELMRQYPKQIIKAFIRNV 341
BLAST of mRNA_P-wetherbeei_contig53637.1.1 vs. uniprot
Match: A0A7Y5KTK7_9DELT (DUF2183 domain-containing protein n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A7Y5KTK7_9DELT) HSP 1 Score: 71.6 bits (174), Expect = 3.680e-13 Identity = 33/57 (57.89%), Postives = 41/57 (71.93%), Query Frame = 1
Query: 13 ETKPPQIEAILSRYRQRRFILIGDSGEDDPEIYSAAFRARPNQIERIYIRNVTAARR 183
ETKPP I A+L R+ +RR +L+GDSGE DPE+Y R R +QI RIYIR+VT R
Sbjct: 309 ETKPPAILALLDRFPKRRVVLVGDSGEKDPEVYGLVARQRASQIARIYIRDVTGEAR 365
BLAST of mRNA_P-wetherbeei_contig53637.1.1 vs. uniprot
Match: UPI0013D1D7DB (DUF2183 domain-containing protein n=1 Tax=Spartinivicinus ruber TaxID=2683272 RepID=UPI0013D1D7DB) HSP 1 Score: 71.2 bits (173), Expect = 4.890e-13 Identity = 33/54 (61.11%), Postives = 37/54 (68.52%), Query Frame = 1
Query: 7 GRETKPPQIEAILSRYRQRRFILIGDSGEDDPEIYSAAFRARPNQIERIYIRNV 168
G ETKP QIE IL Y +R FIL+GDSGE DPE+Y R P QI +I IRNV
Sbjct: 290 GTETKPQQIEPILQAYPKRHFILVGDSGEQDPEVYGELMRKYPEQITKILIRNV 343
BLAST of mRNA_P-wetherbeei_contig53637.1.1 vs. uniprot
Match: UPI0019EB75FD (DUF2183 domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019EB75FD) HSP 1 Score: 70.5 bits (171), Expect = 1.030e-12 Identity = 30/51 (58.82%), Postives = 41/51 (80.39%), Query Frame = 1
Query: 16 TKPPQIEAILSRYRQRRFILIGDSGEDDPEIYSAAFRARPNQIERIYIRNV 168
+KPP+I+ IL +Y QR+FIL+GDSGE DPEIY+ R PNQI+ I+IR++
Sbjct: 85 SKPPRIKKILQKYPQRKFILVGDSGEKDPEIYAKIAREHPNQIKHIFIRDL 135
BLAST of mRNA_P-wetherbeei_contig53637.1.1 vs. uniprot
Match: A0A848W2K4_9PROT (App1 family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848W2K4_9PROT) HSP 1 Score: 70.1 bits (170), Expect = 1.270e-12 Identity = 33/56 (58.93%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 7 GRETKPPQIEAILSRYRQRRFILIGDSGEDDPEIYSAAFRARPNQIERIYIRNVTA 174
RETKP IE +L+R+ R+FIL+GDSGE DPEIY R P+Q+ I IRNVTA
Sbjct: 289 ARETKPAVIENLLARFPDRKFILVGDSGEADPEIYGDVARRFPDQVRAIVIRNVTA 344
BLAST of mRNA_P-wetherbeei_contig53637.1.1 vs. uniprot
Match: UPI001E324D3A (DUF2183 domain-containing protein n=1 Tax=Marinibactrum halimedae TaxID=1444977 RepID=UPI001E324D3A) HSP 1 Score: 69.7 bits (169), Expect = 1.610e-12 Identity = 31/55 (56.36%), Postives = 39/55 (70.91%), Query Frame = 1
Query: 7 GRETKPPQIEAILSRYRQRRFILIGDSGEDDPEIYSAAFRARPNQIERIYIRNVT 171
G ETKP QI IL ++ R+FIL+GDSGE DPE+Y+ P QI+ IYIRN+T
Sbjct: 264 GLETKPAQISEILEQFPNRKFILVGDSGEQDPEVYANIQARYPRQIQAIYIRNIT 318
BLAST of mRNA_P-wetherbeei_contig53637.1.1 vs. uniprot
Match: UPI0011870869 (DUF2183 domain-containing protein n=1 Tax=Pleionea sediminis TaxID=2569479 RepID=UPI0011870869) HSP 1 Score: 69.7 bits (169), Expect = 1.680e-12 Identity = 32/56 (57.14%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 1 RPGRETKPPQIEAILSRYRQRRFILIGDSGEDDPEIYSAAFRARPNQIERIYIRNV 168
+PG ETKP QI ILS+Y +R+FILIGDSGE DPE+Y R P Q+ IRN+
Sbjct: 270 KPGTETKPAQIANILSKYPKRKFILIGDSGEKDPEVYGEMMRKYPEQVVASAIRNI 325
BLAST of mRNA_P-wetherbeei_contig53637.1.1 vs. uniprot
Match: UPI0018F4DF3F (App1 family protein n=2 Tax=Antrihabitans stalagmiti TaxID=2799499 RepID=UPI0018F4DF3F) HSP 1 Score: 69.3 bits (168), Expect = 2.250e-12 Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = 1
Query: 16 TKPPQIEAILSRYRQRRFILIGDSGEDDPEIYSAAFRARPNQIERIYIRNVT 171
TKPP I A+++ Y +RR +L+GDSGE DPE+Y + R P +I RIYIRNVT
Sbjct: 273 TKPPFIRALMAVYPRRRLVLVGDSGEKDPEVYGSIAREAPGRIARIYIRNVT 324 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53637.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig53637.1.1 >prot_P-wetherbeei_contig53637.1.1 ID=prot_P-wetherbeei_contig53637.1.1|Name=mRNA_P-wetherbeei_contig53637.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=61bp RPGRETKPPQIEAILSRYRQRRFILIGDSGEDDPEIYSAAFRARPNQIERback to top mRNA from alignment at P-wetherbeei_contig53637:38..220+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig53637.1.1 ID=mRNA_P-wetherbeei_contig53637.1.1|Name=mRNA_P-wetherbeei_contig53637.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=183bp|location=Sequence derived from alignment at P-wetherbeei_contig53637:38..220+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig53637:38..220+ >mRNA_P-wetherbeei_contig53637.1.1 ID=mRNA_P-wetherbeei_contig53637.1.1|Name=mRNA_P-wetherbeei_contig53637.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=183bp|location=Sequence derived from alignment at P-wetherbeei_contig53637:38..220+ (Phaeothamnion wetherbeei SAG_119_79)back to top |