mRNA_P-wetherbeei_contig53483.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig53483.2.1
Unique NamemRNA_P-wetherbeei_contig53483.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig53483.2.1 vs. uniprot
Match: A0A7K0TYC2_9ACTN (Sortase n=2 Tax=root TaxID=1 RepID=A0A7K0TYC2_9ACTN)

HSP 1 Score: 65.1 bits (157), Expect = 6.280e-12
Identity = 27/42 (64.29%), Postives = 33/42 (78.57%), Query Frame = 1 
Query:    1 GGYRLAKRTRRIWLGTLVVFAPFLVALYFWFENISRQLPPGL 126
            GGY L  R RR WLG L+ FAPF+V LYF+F+N++R LPPGL
Sbjct:  130 GGYLLGIRLRRRWLGALIAFAPFIVVLYFFFQNVNRLLPPGL 171
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BLAST of mRNA_P-wetherbeei_contig53483.2.1 vs. uniprot
Match: A0A6J7ESC7_9ZZZZ (Unannotated protein n=1 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J7ESC7_9ZZZZ)

HSP 1 Score: 65.1 bits (157), Expect = 3.610e-11
Identity = 27/42 (64.29%), Postives = 33/42 (78.57%), Query Frame = 1 
Query:    1 GGYRLAKRTRRIWLGTLVVFAPFLVALYFWFENISRQLPPGL 126
            GGY L  R RR WLG L+ FAPF+V LYF+F+N++R LPPGL
Sbjct:  347 GGYLLGIRLRRRWLGALIAFAPFIVVLYFFFQNVNRLLPPGL 388
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BLAST of mRNA_P-wetherbeei_contig53483.2.1 vs. uniprot
Match: A0A6I2WRK2_9ACTN (Class E sortase n=3 Tax=root TaxID=1 RepID=A0A6I2WRK2_9ACTN)

HSP 1 Score: 65.1 bits (157), Expect = 3.750e-11
Identity = 27/42 (64.29%), Postives = 33/42 (78.57%), Query Frame = 1 
Query:    1 GGYRLAKRTRRIWLGTLVVFAPFLVALYFWFENISRQLPPGL 126
            GGY L  R RR WLG L+ FAPF+V LYF+F+N++R LPPGL
Sbjct:  471 GGYLLGIRLRRRWLGALIAFAPFIVVLYFFFQNVNRLLPPGL 512
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BLAST of mRNA_P-wetherbeei_contig53483.2.1 vs. uniprot
Match: A0A539E3N1_9ACTN (Peptidase C60 family protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539E3N1_9ACTN)

HSP 1 Score: 62.4 bits (150), Expect = 3.330e-10
Identity = 25/42 (59.52%), Postives = 32/42 (76.19%), Query Frame = 1 
Query:    1 GGYRLAKRTRRIWLGTLVVFAPFLVALYFWFENISRQLPPGL 126
            G YR+++R RR W+G L  F PF+V LYF+FEN+SR LPP L
Sbjct:  392 GAYRVSRRARRYWVGALAGFVPFVVVLYFFFENVSRLLPPNL 433
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BLAST of mRNA_P-wetherbeei_contig53483.2.1 vs. uniprot
Match: A0A6C7E3Q4_ILUCY (Peptidase C60 family protein n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7E3Q4_ILUCY)

HSP 1 Score: 62.0 bits (149), Expect = 4.570e-10
Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = 1 
Query:    1 GGYRLAKRTRRIWLGTLVVFAPFLVALYFWFENISRQLPPGL 126
            G Y L++RTRR W+G LV F PF+VALYF+F+N++R LPP L
Sbjct:  446 GAYLLSRRTRRDWIGGLVGFIPFVVALYFFFQNVNRLLPPNL 487
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BLAST of mRNA_P-wetherbeei_contig53483.2.1 vs. uniprot
Match: A0A6I3WTX4_9ACTN (Sortase n=2 Tax=root TaxID=1 RepID=A0A6I3WTX4_9ACTN)

HSP 1 Score: 60.5 bits (145), Expect = 1.590e-9
Identity = 25/42 (59.52%), Postives = 32/42 (76.19%), Query Frame = 1 
Query:    1 GGYRLAKRTRRIWLGTLVVFAPFLVALYFWFENISRQLPPGL 126
            G Y+LAKR RR+WLG LV   PF+V LYF+FEN++R LP  +
Sbjct:  384 GAYQLAKRQRRLWLGFLVGMVPFVVVLYFFFENVNRMLPAAI 425
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BLAST of mRNA_P-wetherbeei_contig53483.2.1 vs. uniprot
Match: A0A7K1B6R7_9ACTN (Sortase n=2 Tax=root TaxID=1 RepID=A0A7K1B6R7_9ACTN)

HSP 1 Score: 58.5 bits (140), Expect = 4.320e-9
Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 1 
Query:   13 LAKRTRRIWLGTLVVFAPFLVALYFWFENISRQLPPGL 126
            L++RTRR W+G LV   PF+V LYFWFEN++R LPP +
Sbjct:  192 LSRRTRRNWVGALVGIGPFVVVLYFWFENVNRLLPPNV 229
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BLAST of mRNA_P-wetherbeei_contig53483.2.1 vs. uniprot
Match: A0A7Y1ZT96_9ACTN (Class E sortase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZT96_9ACTN)

HSP 1 Score: 55.8 bits (133), Expect = 6.810e-8
Identity = 23/42 (54.76%), Postives = 31/42 (73.81%), Query Frame = 1 
Query:    1 GGYRLAKRTRRIWLGTLVVFAPFLVALYFWFENISRQLPPGL 126
            G Y +++R RR W G LV   PF+VALYF+F+N++R LPP L
Sbjct:  436 GAYLISRRFRRDWAGALVGIMPFVVALYFFFQNVNRLLPPNL 477
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BLAST of mRNA_P-wetherbeei_contig53483.2.1 vs. uniprot
Match: A0A3C2B1E0_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B1E0_9ACTN)

HSP 1 Score: 53.5 bits (127), Expect = 4.450e-7
Identity = 20/42 (47.62%), Postives = 29/42 (69.05%), Query Frame = 1 
Query:    1 GGYRLAKRTRRIWLGTLVVFAPFLVALYFWFENISRQLPPGL 126
            G Y + +  RR+W+   V F PF+V LYF++EN+ R LPPG+
Sbjct:  341 GSYFIGRAARRLWVTFAVAFLPFIVCLYFFYENVHRLLPPGI 382
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BLAST of mRNA_P-wetherbeei_contig53483.2.1 vs. uniprot
Match: A0A4R7I3E5_9ACTN (LPXTG-site transpeptidase (Sortase) family protein n=2 Tax=Ilumatobacter fluminis TaxID=467091 RepID=A0A4R7I3E5_9ACTN)

HSP 1 Score: 53.1 bits (126), Expect = 6.090e-7
Identity = 22/40 (55.00%), Postives = 32/40 (80.00%), Query Frame = 1 
Query:    7 YRLAKRTRRIWLGTLVVFAPFLVALYFWFENISRQLPPGL 126
            Y+L+K+TR   +G +V   PFL+ALYF+F+N++R LPPGL
Sbjct:  527 YQLSKKTRHDSIGFMVGIFPFLIALYFFFQNVNRLLPPGL 566
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53483.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A7K0TYC2_9ACTN6.280e-1264.29Sortase n=2 Tax=root TaxID=1 RepID=A0A7K0TYC2_9ACT... [more]
A0A6J7ESC7_9ZZZZ3.610e-1164.29Unannotated protein n=1 Tax=freshwater metagenome ... [more]
A0A6I2WRK2_9ACTN3.750e-1164.29Class E sortase n=3 Tax=root TaxID=1 RepID=A0A6I2W... [more]
A0A539E3N1_9ACTN3.330e-1059.52Peptidase C60 family protein n=1 Tax=Acidimicrobia... [more]
A0A6C7E3Q4_ILUCY4.570e-1061.90Peptidase C60 family protein n=1 Tax=Ilumatobacter... [more]
A0A6I3WTX4_9ACTN1.590e-959.52Sortase n=2 Tax=root TaxID=1 RepID=A0A6I3WTX4_9ACT... [more]
A0A7K1B6R7_9ACTN4.320e-960.53Sortase n=2 Tax=root TaxID=1 RepID=A0A7K1B6R7_9ACT... [more]
A0A7Y1ZT96_9ACTN6.810e-854.76Class E sortase n=1 Tax=Ilumatobacter sp. TaxID=19... [more]
A0A3C2B1E0_9ACTN4.450e-747.62Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A4R7I3E5_9ACTN6.090e-755.00LPXTG-site transpeptidase (Sortase) family protein... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53483contigP-wetherbeei_contig53483:397..525 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1313172.YM304_09590
PFAMsSortase
Model size129
Max annot lvl84992|Acidimicrobiia
KEGG koko:K07284
Hectar predicted targeting categorysignal anchor
Exons1
Evalue7.49e-11
EggNOG OGsCOG3764@1|root,COG3764@2|Bacteria,2GKT6@201174|Actinobacteria,4CNXW@84992|Acidimicrobiia
EC3.4.22.70
DescriptionSortase family
Cds size129
COG categoryM
BRITEko00000,ko01000,ko01002,ko01011
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186799.9196582-CDS-P-wetherbeei_contig53483:396..5251683186799.9196582-CDS-P-wetherbeei_contig53483:396..525Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig53483 397..525 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53483.2.1prot_P-wetherbeei_contig53483.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig53483 397..525 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig53483.2.1

>prot_P-wetherbeei_contig53483.2.1 ID=prot_P-wetherbeei_contig53483.2.1|Name=mRNA_P-wetherbeei_contig53483.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=43bp
GGYRLAKRTRRIWLGTLVVFAPFLVALYFWFENISRQLPPGL*
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mRNA from alignment at P-wetherbeei_contig53483:397..525-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig53483.2.1 ID=mRNA_P-wetherbeei_contig53483.2.1|Name=mRNA_P-wetherbeei_contig53483.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=129bp|location=Sequence derived from alignment at P-wetherbeei_contig53483:397..525- (Phaeothamnion wetherbeei SAG_119_79)
GGCGGCTACCGGCTGGCCAAGCGAACCAGACGCATCTGGCTCGGCACGCT
CGTCGTGTTCGCGCCCTTCCTCGTCGCCCTCTACTTCTGGTTCGAGAACA
TCAGCCGCCAGCTCCCGCCGGGCCTGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig53483:397..525-

>mRNA_P-wetherbeei_contig53483.2.1 ID=mRNA_P-wetherbeei_contig53483.2.1|Name=mRNA_P-wetherbeei_contig53483.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=129bp|location=Sequence derived from alignment at P-wetherbeei_contig53483:397..525- (Phaeothamnion wetherbeei SAG_119_79)
GGCGGCTACCGGCTGGCCAAGCGAACCAGACGCATCTGGCTCGGCACGCT
CGTCGTGTTCGCGCCCTTCCTCGTCGCCCTCTACTTCTGGTTCGAGAACA
TCAGCCGCCAGCTCCCGCCGGGCCTGTAG
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