mRNA_P-wetherbeei_contig5322.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5322.2.1 vs. uniprot
Match: A0A7X8XLR7_9BURK (Response regulator transcription factor n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XLR7_9BURK) HSP 1 Score: 281 bits (719), Expect = 3.090e-93 Identity = 133/219 (60.73%), Postives = 172/219 (78.54%), Query Frame = 1
Query: 10 TRILVVDDEESIIDFVTMALEYEGYEVITASNGRAALELYRTERPQLLVLDWMLPDVDGLQVCREVRALSTVPILMLTARCQLEDKVQGLDSGVDDYLAKPFKMAELQARIRALLRRSGVDPGNTLTFGDIVAHLANRTLFKDGAAIEVTAREFELLELFLRNPRHVLTKEQILSQLWGWDYDGATNVVEVHISALRQKLGDTDRKLIRTVRGIGYSLG 666
+ ILVVDDEESI++ + + L EG+ V+ A G AL+L+R E P L+VLDWMLP+VDGL+VCR +RA + VPILMLTAR ++D+V+GL++G DDYL KPFK EL AR+RALLRR+G DPGN L F D+V R + + G +E+T +EFE+LE LR+PR VL++EQIL+Q+WGWDY G NVVEVH+SALR KLGD+DR+LIRTVRG+GY+LG
Sbjct: 6 STILVVDDEESILELLDLGLGREGFRVLAARTGAEALDLFRAENPDLVVLDWMLPEVDGLEVCRRLRASNQVPILMLTARNDVDDRVRGLETGADDYLPKPFKFKELLARVRALLRRAGSDPGNRLGFDDVVLDRRERRVTRAGQPVELTVKEFEILEYLLRHPRQVLSREQILNQVWGWDYPGGANVVEVHLSALRAKLGDSDRRLIRTVRGVGYALG 224
BLAST of mRNA_P-wetherbeei_contig5322.2.1 vs. uniprot
Match: A0A355TT01_9BACT (DNA-binding response regulator n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TT01_9BACT) HSP 1 Score: 242 bits (618), Expect = 6.600e-78 Identity = 121/217 (55.76%), Postives = 157/217 (72.35%), Query Frame = 1
Query: 16 ILVVDDEESIIDFVTMALEYEGYEVITASNGRAALELYRTERPQLLVLDWMLPDVDGLQVCREVRALSTVPILMLTARCQLEDKVQGLDSGVDDYLAKPFKMAELQARIRALLRRSGVDPGNTLTFGDIVAHLANRTLFKDGAAIEVTAREFELLELFLRNPRHVLTKEQILSQLWGWDYDGATNVVEVHISALRQKLGDTDRKLIRTVRGIGYSLG 666
+LVVDDEESI + VT LE+E Y ITA+ G AL+ ++ P L++LD MLPD+ GL+VC+ +R+++ VPIL L+A+ QLED V+GLD+G DDYLAKPF AEL AR+RALLRRS N L + DI+ + + K G + +T REFELLE+F+ PR V T++QIL QLWGW D TNVVEV+I ALR KL D +R L+RTVRG+GY+LG
Sbjct: 8 VLVVDDEESIRESVTYTLEHESYRTITAATGSEALKKFKDNHPDLVILDIMLPDISGLEVCKGIRSIADVPILFLSAKDQLEDMVEGLDNGGDDYLAKPFHFAELMARVRALLRRSKGRKVNFLEYEDIILDPDSHIVTKGGRTLHLTLREFELLEMFMSKPRQVFTRQQILQQLWGWSDDLETNVVEVYICALRNKLDDENRSLLRTVRGVGYALG 224
BLAST of mRNA_P-wetherbeei_contig5322.2.1 vs. uniprot
Match: A0A1F8NQG0_9CHLR (DNA-binding response regulator n=1 Tax=Chloroflexi bacterium RBG_13_68_17 TaxID=1797638 RepID=A0A1F8NQG0_9CHLR) HSP 1 Score: 234 bits (596), Expect = 1.490e-74 Identity = 116/220 (52.73%), Postives = 157/220 (71.36%), Query Frame = 1
Query: 7 KTRILVVDDEESIIDFVTMALEYEGYEVITASNGRAALELYRTERPQLLVLDWMLPDVDGLQVCREVRALSTVPILMLTARCQLEDKVQGLDSGVDDYLAKPFKMAELQARIRALLRRSGVDPGNTLTFGDIVAHLANRTLFKDGAAIEVTAREFELLELFLRNPRHVLTKEQILSQLWGWDYDGATNVVEVHISALRQKLGDT-DRKLIRTVRGIGYSL 663
+ R+L+++DEE I+DF+ L YEGY V TA++G A L R P L+VLDWMLP +DGL+VC+ +RA S VPILMLTA+ + D+VQGLD+G DDYL KPF+ EL ARIRALLRR+ + TL+F D+ F+ A E+TA+E+ELLELFLR+PR VLT+E I ++WG+D+ G +N++EV+I LRQK + + +LI TVRG+GY L
Sbjct: 2 RERVLIIEDEEKILDFLRRGLSYEGYRVETAADGTAGLNAARETPPDLVVLDWMLPGLDGLEVCKRLRAGSEVPILMLTAKDAVSDRVQGLDAGADDYLVKPFEFDELLARIRALLRRARPEGAETLSFADLRLDTGTHQGFRGERAFELTAKEYELLELFLRHPRQVLTREVIFDRVWGYDFGGESNIIEVYIRYLRQKTEEGGEPRLIHTVRGVGYVL 221
BLAST of mRNA_P-wetherbeei_contig5322.2.1 vs. uniprot
Match: A0A7W1TPN3_9CHLR (Response regulator transcription factor n=1 Tax=Herpetosiphonaceae bacterium TaxID=2720503 RepID=A0A7W1TPN3_9CHLR) HSP 1 Score: 233 bits (594), Expect = 3.410e-74 Identity = 117/219 (53.42%), Postives = 158/219 (72.15%), Query Frame = 1
Query: 13 RILVVDDEESIIDFVTMALEYEGYEVITASNGRAALELYRTERPQLLVLDWMLPDVDGLQVCREVRALSTVPILMLTARCQLEDKVQGLDSGVDDYLAKPFKMAELQARIRALLRRSGVDPGNTLTFGDIVAHLANRTLFKDGAAIEVTAREFELLELFLRNPRHVLTKEQILSQLWGWDYDGATNVVEVHISALRQKLGDTDRKLIRTVRGIGYSLGG 669
RILVVDDE +I +F+ L YEGY V+T ++G ALE T P++++LD MLPDVDG +VCR +R S V ILMLTAR ++D+V GL+ G DDYL KPFK EL AR+R++LRR + + L G++ +R + + A + +T REFE+LEL + +PR VLT+E IL+++WG++Y G TNVVEVHIS+LR KLGD DR+ I+TVRG+GYSL G
Sbjct: 11 RILVVDDEPTITEFLETGLTYEGYTVVTVADGATALETAHTFHPEVVILDVMLPDVDGWEVCRRLRQESEVGILMLTARGDVDDRVNGLEMGADDYLVKPFKFKELLARVRSILRRRRIALPHILQSGELRLDRESRDVTVNNAPVHLTPREFEVLELLMTHPRQVLTRETILNRVWGYNYFGDTNVVEVHISSLRDKLGDRDRQRIQTVRGVGYSLRG 229
BLAST of mRNA_P-wetherbeei_contig5322.2.1 vs. uniprot
Match: A0A7C4LAL1_9CHLR (Response regulator transcription factor n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C4LAL1_9CHLR) HSP 1 Score: 231 bits (590), Expect = 1.210e-73 Identity = 114/222 (51.35%), Postives = 154/222 (69.37%), Query Frame = 1
Query: 1 MSKTRILVVDDEESIIDFVTMALEYEGYEVITASNGRAALELYRTERPQLLVLDWMLPDVDGLQVCREVRALSTVPILMLTARCQLEDKVQGLDSGVDDYLAKPFKMAELQARIRALLRRSGVDPGNTLTFGDIVAHLANRTLFKDGAAIEVTAREFELLELFLRNPRHVLTKEQILSQLWGWDYDGATNVVEVHISALRQKL-GDTDRKLIRTVRGIGYSL 663
M+ TRILV++DEE I F+ L YEGY V A++G A L L R P L++LDWMLP +DGL+VCR +RA +PILMLTA+ + D+VQGLD+G DDYL KPF EL AR+RALLRR+ L F D+ R F+ AIE+TA+E+ELLELF+R+PR VLT+E I ++WG+D+ G +N++EV++ LRQK + + +L+ TVRG+GY L
Sbjct: 1 MTTTRILVIEDEERIRQFLQRGLTYEGYRVDMAADGPAGLALARENPPDLVILDWMLPGMDGLEVCRRLRAAGPMPILMLTAKDSVSDRVQGLDAGADDYLVKPFSFEELLARLRALLRRAAPPQLEALRFADLTLDTGTRQAFRGERAIELTAKEYELLELFMRHPRQVLTREVIYDRVWGYDFGGESNIIEVYVRYLRQKTEAEGETRLLHTVRGVGYVL 222
BLAST of mRNA_P-wetherbeei_contig5322.2.1 vs. uniprot
Match: A0A0M9U3A0_9CHLR (Transcriptional regulator n=1 Tax=Levilinea saccharolytica TaxID=229921 RepID=A0A0M9U3A0_9CHLR) HSP 1 Score: 231 bits (590), Expect = 1.210e-73 Identity = 110/218 (50.46%), Postives = 161/218 (73.85%), Query Frame = 1
Query: 13 RILVVDDEESIIDFVTMALEYEGYEVITASNGRAALELYRTERPQLLVLDWMLPDVDGLQVCREVRALSTVPILMLTARCQLEDKVQGLDSGVDDYLAKPFKMAELQARIRALLRRSGVDPGNTLTFGDIVAHLANRTLFKDGAAIEVTAREFELLELFLRNPRHVLTKEQILSQLWGWDYDGATNVVEVHISALRQKL-GDTDRKLIRTVRGIGYSL 663
++L+++D+E+I+ + +L YEGY+V A +G + L L R +P L++LDWMLP +DGL+VC+ +RALS VP+LMLTA+ L D+VQGLD+G DDY+ KPF++ EL ARIRALLRR+ D L F D+ + R ++G I +TA+E++LLELF+R+PR VLT+E I ++WG+D+ G +NV++V+I LRQKL GD + +LI TVRG+GY +
Sbjct: 4 KVLIIEDDEAIVKLLRRSLAYEGYQVDAALDGESGLALARDRQPDLVILDWMLPGMDGLEVCQRLRALSNVPVLMLTAKDTLHDRVQGLDAGADDYVVKPFQLDELTARIRALLRRTQQDRTPVLNFMDLNLDTSTRQAERNGRIISLTAKEYDLLELFMRHPRQVLTREMIFDRVWGYDFGGESNVLDVYIRYLRQKLEGDKESRLIYTVRGVGYVM 221
BLAST of mRNA_P-wetherbeei_contig5322.2.1 vs. uniprot
Match: A0A1F8NQY6_9CHLR (DNA-binding response regulator n=1 Tax=Chloroflexi bacterium RBG_13_66_10 TaxID=1797637 RepID=A0A1F8NQY6_9CHLR) HSP 1 Score: 231 bits (589), Expect = 1.710e-73 Identity = 115/220 (52.27%), Postives = 153/220 (69.55%), Query Frame = 1
Query: 7 KTRILVVDDEESIIDFVTMALEYEGYEVITASNGRAALELYRTERPQLLVLDWMLPDVDGLQVCREVRALSTVPILMLTARCQLEDKVQGLDSGVDDYLAKPFKMAELQARIRALLRRSGVDPGNTLTFGDIVAHLANRTLFKDGAAIEVTAREFELLELFLRNPRHVLTKEQILSQLWGWDYDGATNVVEVHISALRQKL-GDTDRKLIRTVRGIGYSL 663
+ RILV++DEE I+ + L YEGY V A+NG + L + R P +++LDWMLP +DGL+VCR +RA +VPILMLTA+ L D+VQGLDSG DDYL KPF+ EL ARIRALLRRS D L+FGD+ F+ E+TA+E+ELLELFLR+PR VLT+E I ++WG+D+ G +N++EV++ LRQK + +LI TVRG+GY L
Sbjct: 2 RERILVIEDEERILQLLRRGLTYEGYRVEMAANGTSGLAMARESPPDVVILDWMLPGIDGLEVCRRLRAAGSVPILMLTAKDALADRVQGLDSGADDYLVKPFEFDELLARIRALLRRSRPDGTEMLSFGDLRLDTGTHQGFRGDRPFELTAKEYELLELFLRHPRQVLTREVIYDRVWGYDFGGESNIIEVYVRYLRQKTEAAVEPRLIHTVRGVGYVL 221
BLAST of mRNA_P-wetherbeei_contig5322.2.1 vs. uniprot
Match: E8N1F5_ANATU (OmpR family two-component response regulator n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) TaxID=926569 RepID=E8N1F5_ANATU) HSP 1 Score: 231 bits (588), Expect = 2.430e-73 Identity = 111/220 (50.45%), Postives = 157/220 (71.36%), Query Frame = 1
Query: 7 KTRILVVDDEESIIDFVTMALEYEGYEVITASNGRAALELYRTERPQLLVLDWMLPDVDGLQVCREVRALSTVPILMLTARCQLEDKVQGLDSGVDDYLAKPFKMAELQARIRALLRRSGVDPGNTLTFGDIVAHLANRTLFKDGAAIEVTAREFELLELFLRNPRHVLTKEQILSQLWGWDYDGATNVVEVHISALRQKL-GDTDRKLIRTVRGIGYSL 663
K RIL+++D+E I+ + AL YEGY V +A G L+L R RP L++LDWMLP +DGL+VC+ +R L PILMLTA+ L+D+VQGLD+G DDY+ KPF++ EL ARIRALLRR+ ++ L+F D+ + R + I +TA+E++LLELFLR+PR VLT+E I ++WG+D+ G +NV++V+I LRQKL D + +L+ TVRG+GY L
Sbjct: 2 KERILIIEDDEGIVRVLKRALTYEGYLVESALEGETGLQLAREHRPDLIILDWMLPGMDGLEVCQRLRTLCNAPILMLTAKDTLQDRVQGLDAGADDYMTKPFELEELLARIRALLRRTQMERAPVLSFADLTLDTSTRQATRGNRTIPLTAKEYDLLELFLRHPRQVLTREMIFDRVWGYDFGGESNVLDVYIRYLRQKLESDGEPRLLHTVRGVGYVL 221
BLAST of mRNA_P-wetherbeei_contig5322.2.1 vs. uniprot
Match: A0A2U2S252_9CHLR (DNA-binding response regulator n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A2U2S252_9CHLR) HSP 1 Score: 231 bits (588), Expect = 2.510e-73 Identity = 109/219 (49.77%), Postives = 156/219 (71.23%), Query Frame = 1
Query: 13 RILVVDDEESIIDFVTMALEYEGYEVITASNGRAALELYRTERPQLLVLDWMLPDVDGLQVCREVRALSTVPILMLTARCQLEDKVQGLDSGVDDYLAKPFKMAELQARIRALLRRSGVDPGNTLTFGDIVAHLANRTLFKDGAAIEVTAREFELLELFLRNPRHVLTKEQILSQLWGWDYDGATNVVEVHISALRQKLGDTDR--KLIRTVRGIGYSL 663
RIL+++D+++I+ + L YEGY V A++GR L L R P L++LDWMLP +DGL+VC +R ++PILMLTA+ ++D+VQGLD+G DDY+ KPF + ELQARIRALLRR+ + L F D+ +R + G I++TA+E+ELLELF+R+P+ VLT+E I ++WG+D+ G +NV+EV+I LRQKL D + +LI TVRG+GY L
Sbjct: 4 RILIIEDDQAILKVLQRGLAYEGYAVDVATDGRTGLNLARDRNPDLVILDWMLPGMDGLEVCHRLRLAGSMPILMLTAKDSIQDRVQGLDAGADDYMVKPFNLDELQARIRALLRRTQPERNQVLKFADLTLDTGSREAIRGGKLIQLTAKEYELLELFMRHPKQVLTREVIFDRVWGYDFGGESNVLEVYIRYLRQKLEDNETLPRLIHTVRGVGYVL 222
BLAST of mRNA_P-wetherbeei_contig5322.2.1 vs. uniprot
Match: A0A7X9PDU8_9CHLR (Response regulator transcription factor n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A7X9PDU8_9CHLR) HSP 1 Score: 229 bits (583), Expect = 1.390e-72 Identity = 110/220 (50.00%), Postives = 158/220 (71.82%), Query Frame = 1
Query: 7 KTRILVVDDEESIIDFVTMALEYEGYEVITASNGRAALELYRTERPQLLVLDWMLPDVDGLQVCREVRALSTVPILMLTARCQLEDKVQGLDSGVDDYLAKPFKMAELQARIRALLRRSGVDPGNTLTFGDIVAHLANRTLFKDGAAIEVTAREFELLELFLRNPRHVLTKEQILSQLWGWDYDGATNVVEVHISALRQKL-GDTDRKLIRTVRGIGYSL 663
K R+L+++D+E I + AL YEGY+V +A +G + L L R P L++LDWMLP +DGL+VCR +R +STVPILMLTA+ LED++ GLD+G DDY+ KPF++ EL AR+RALLRR+ V+ L+F D+ + R + I +TA+E++LLELF+R+PR VLT+E I ++WG+D+ G +NV++V+I LRQKL G + +LI TVR +GY L
Sbjct: 2 KERVLIIEDDEGISKVLRRALSYEGYQVDSALDGESGLNLNRDNHPDLVLLDWMLPGMDGLEVCRRLREVSTVPILMLTAKEALEDRIHGLDAGADDYMVKPFELDELLARVRALLRRTQVERAPVLSFSDLTLDTSTRQATRKNRVIMLTAKEYDLLELFMRHPRQVLTRELIFDRVWGYDFGGESNVLDVYIRYLRQKLEGQGEPRLIHTVRSVGYVL 221 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5322.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5322.2.1 >prot_P-wetherbeei_contig5322.2.1 ID=prot_P-wetherbeei_contig5322.2.1|Name=mRNA_P-wetherbeei_contig5322.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=224bp MSKTRILVVDDEESIIDFVTMALEYEGYEVITASNGRAALELYRTERPQLback to top mRNA from alignment at P-wetherbeei_contig5322:2120..2791+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5322.2.1 ID=mRNA_P-wetherbeei_contig5322.2.1|Name=mRNA_P-wetherbeei_contig5322.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=672bp|location=Sequence derived from alignment at P-wetherbeei_contig5322:2120..2791+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5322:2120..2791+ >mRNA_P-wetherbeei_contig5322.2.1 ID=mRNA_P-wetherbeei_contig5322.2.1|Name=mRNA_P-wetherbeei_contig5322.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=672bp|location=Sequence derived from alignment at P-wetherbeei_contig5322:2120..2791+ (Phaeothamnion wetherbeei SAG_119_79)back to top |