mRNA_P-wetherbeei_contig53066.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig53066.1.1 vs. uniprot
Match: A0A537SC66_9PROT (Extradiol ring-cleavage dioxygenase (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537SC66_9PROT) HSP 1 Score: 193 bits (491), Expect = 3.460e-61 Identity = 89/125 (71.20%), Postives = 105/125 (84.00%), Query Frame = 1
Query: 1 MAEIVGGFGVPHTPVFPWFVKRDGPDCETARLFSAQKEDLAATRPDVIVMFDTDHLNTFFLDNLPIFAIGVDKSFKAPNDEPREMPVYTVPSAPDLAAHIRTTAVEAGFDLALVQKFSVDHSIAV 375
MA+IV GFGVPHTP+FP FVKRDGPDCETA+LF AQK LAA RP++IVMFDTDHLNTFFLD+LPIFA+G+D FKAPNDEP+++P Y VPS D+AAHIR V AGFD+ + Q +SVDHS+ V
Sbjct: 1 MAQIVAGFGVPHTPIFPHFVKRDGPDCETAKLFGAQKAQLAAERPNLIVMFDTDHLNTFFLDSLPIFAVGIDTRFKAPNDEPQDVPNYIVPSMLDVAAHIRCAVVAAGFDVGMTQNYSVDHSVTV 125
BLAST of mRNA_P-wetherbeei_contig53066.1.1 vs. uniprot
Match: A0A6L5FH39_9HYPH (Extradiol ring-cleavage dioxygenase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FH39_9HYPH) HSP 1 Score: 178 bits (451), Expect = 1.470e-53 Identity = 86/125 (68.80%), Postives = 97/125 (77.60%), Query Frame = 1
Query: 1 MAEIVGGFGVPHTPVFPWFVKRDGPDCETARLFSAQKEDLAATRPDVIVMFDTDHLNTFFLDNLPIFAIGVDKSFKAPNDEPREMPVYTVPSAPDLAAHIRTTAVEAGFDLALVQKFSVDHSIAV 375
MAEIV GFGVPHTPVFP+FV+RDGPDCE A LF E L RPD+IVMFDTDH+NTFFLDNLPIFA+GV F PNDE R +PV TV S D+AAH+R V AGFDL L+Q+FSVDHS+ V
Sbjct: 1 MAEIVAGFGVPHTPVFPFFVERDGPDCEIAVLFRKLTEHLEEIRPDLIVMFDTDHMNTFFLDNLPIFAVGVGDDFTGPNDEVRSVPVQTVKSRGDVAAHLRNVGVHAGFDLGLLQEFSVDHSVFV 125
BLAST of mRNA_P-wetherbeei_contig53066.1.1 vs. uniprot
Match: A0A2V7DKH3_9BACT (Extradiol ring-cleavage dioxygenase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7DKH3_9BACT) HSP 1 Score: 150 bits (378), Expect = 1.450e-42 Identity = 72/125 (57.60%), Postives = 89/125 (71.20%), Query Frame = 1
Query: 1 MAEIVGGFGVPHTPVFPWFVKRDGPDCETARLFSAQKEDLAATRPDVIVMFDTDHLNTFFLDNLPIFAIGVDKSFKAPNDEPREMPVYTVPSAPDLAAHIRTTAVEAGFDLALVQKFSVDHSIAV 375
M EIV GFGVPHTP+FP VKRDGP CETA+L+ A L A +PD +V+FD+DHLNTFFLDN P +IGV PND E+P YTVP + DLA + + +++GFDL+L Q+F VDHSI V
Sbjct: 1 MGEIVAGFGVPHTPMFPALVKRDGPQCETAQLYRAVAGHLDAIKPDALVVFDSDHLNTFFLDNYPNLSIGVTDQTTGPNDGTPELPPYTVPVSEDLAGRLYSFGLQSGFDLSLAQEFDVDHSILV 125
BLAST of mRNA_P-wetherbeei_contig53066.1.1 vs. uniprot
Match: A0A536PTQ8_9CHLR (Extradiol ring-cleavage dioxygenase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A536PTQ8_9CHLR) HSP 1 Score: 138 bits (347), Expect = 6.540e-38 Identity = 67/125 (53.60%), Postives = 83/125 (66.40%), Query Frame = 1
Query: 1 MAEIVGGFGVPHTPVFPWFVKRDGPDCETARLFSAQKEDLAATRPDVIVMFDTDHLNTFFLDNLPIFAIGVDKSFKAPNDEPREMPVYTVPSAPDLAAHIRTTAVEAGFDLALVQKFSVDHSIAV 375
MAE+VGG GVPH P FP V R+GP + A F +L A RPD +V+F DH+NTFFLDNLP+F++GV PND +P Y VP A LAAH+R + AGFDLAL Q+F+VDHS+ V
Sbjct: 15 MAELVGGVGVPHDPGFPELVAREGPRSDVATRFGEIAAELEAMRPDALVVFTADHMNTFFLDNLPLFSVGVADRTTGPNDGTPALPRYDVPFAEGLAAHVRDRGIAAGFDLALTQEFAVDHSVLV 139
BLAST of mRNA_P-wetherbeei_contig53066.1.1 vs. uniprot
Match: A0A1Q7QIT4_9CHLR (LigB domain-containing protein n=5 Tax=unclassified Chloroflexi TaxID=189774 RepID=A0A1Q7QIT4_9CHLR) HSP 1 Score: 137 bits (344), Expect = 4.290e-37 Identity = 66/125 (52.80%), Postives = 83/125 (66.40%), Query Frame = 1
Query: 1 MAEIVGGFGVPHTPVFPWFVKRDGPDCETARLFSAQKEDLAATRPDVIVMFDTDHLNTFFLDNLPIFAIGVDKSFKAPNDEPREMPVYTVPSAPDLAAHIRTTAVEAGFDLALVQKFSVDHSIAV 375
MAE+VGG GVPH P FP V R+GP + A F +L + RPD +V+F DH+NTFFLDNLP+F++GV PND +P Y VP A LAAH+R + AGFDLAL Q+F+VDHS+ V
Sbjct: 37 MAELVGGVGVPHDPGFPELVAREGPRSDVATRFGEIAAELESMRPDALVVFTADHMNTFFLDNLPLFSVGVADRTTGPNDGTPALPRYDVPVAEGLAAHVRDRGIAAGFDLALTQEFAVDHSVLV 161
BLAST of mRNA_P-wetherbeei_contig53066.1.1 vs. uniprot
Match: A0A542AG62_9HYPH (Protocatechuate 4,5-dioxygenase beta subunit n=1 Tax=Bosea sp. AK1 TaxID=2587160 RepID=A0A542AG62_9HYPH) HSP 1 Score: 135 bits (341), Expect = 4.940e-37 Identity = 70/125 (56.00%), Postives = 81/125 (64.80%), Query Frame = 1
Query: 1 MAEIVGGFGVPHTPVFPWFVKRDGPDCETARLFSAQKEDLAATRPDVIVMFDTDHLNTFFLDNLPIFAIGVDKSFKAPNDEPREMPVYTVPSAPDLAAHIRTTAVEAGFDLALVQKFSVDHSIAV 375
MA I G G+PH P P V R+GP ET +LF+ +E +AA DVIV F TDHLNTFF DNLPIF IGV F PNDE +PV V S LA H+R A+ GFD ALVQ+FSVDHS +V
Sbjct: 1 MASITAGIGLPHVPFLPALVLREGPTSETGQLFAQVREAMAAVPIDVIVEFSTDHLNTFFFDNLPIFGIGVADRFAGPNDEVEAVPVSEVRSDRALAEHLRKAAISDGFDTALVQEFSVDHSFSV 125
BLAST of mRNA_P-wetherbeei_contig53066.1.1 vs. uniprot
Match: F2IZI2_POLGS (Extradiol ring-cleavage dioxygenase class III protein subunit B n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) TaxID=991905 RepID=F2IZI2_POLGS) HSP 1 Score: 119 bits (297), Expect = 1.990e-30 Identity = 60/125 (48.00%), Postives = 72/125 (57.60%), Query Frame = 1
Query: 1 MAEIVGGFGVPHTPVFPWFVKRDGPDCETARLFSAQKEDLAATRPDVIVMFDTDHLNTFFLDNLPIFAIGVDKSFKAPNDEPREMPVYTVPSAPDLAAHIRTTAVEAGFDLALVQKFSVDHSIAV 375
MA IVGG GVPHTP FP F ++G + E F + DL A RPDVI+M DTDH NTF+ D P FA+GVD F P D+ MP + S LA H+ + FD ALV F V HS+ V
Sbjct: 1 MARIVGGIGVPHTPYFPRFAAQEGSNGEINTFFGKVRADLEAHRPDVILMIDTDHFNTFYFDTYPTFAVGVDHGFYGPVDDVALMPPRVIRSHKTLALHLHRELIARDFDSALVTNFKVGHSVCV 125
BLAST of mRNA_P-wetherbeei_contig53066.1.1 vs. uniprot
Match: G4RAM4_PELHB (Protocatechuate 4,5-dioxygenase beta chain n=1 Tax=Pelagibacterium halotolerans (strain DSM 22347 / JCM 15775 / CGMCC 1.7692 / B2) TaxID=1082931 RepID=G4RAM4_PELHB) HSP 1 Score: 119 bits (297), Expect = 2.080e-30 Identity = 59/125 (47.20%), Postives = 73/125 (58.40%), Query Frame = 1
Query: 1 MAEIVGGFGVPHTPVFPWFVKRDGPDCETARLFSAQKEDLAATRPDVIVMFDTDHLNTFFLDNLPIFAIGVDKSFKAPNDEPREMPVYTVPSAPDLAAHIRTTAVEAGFDLALVQKFSVDHSIAV 375
MA I GG GVPHTP FP F +GP+ E F+ + + A RPDV+++ DTDH NTF+ DN P FA+GVD SF P D+ MP + S LA H+ T V A FD A V F + HS V
Sbjct: 1 MARITGGIGVPHTPYFPKFAAAEGPEGEINSFFAPIRARIEAHRPDVLIVIDTDHFNTFYFDNFPTFAVGVDDSFYGPIDDVALMPPRDIGSDRALARHLHTALVRAEFDPAFVTNFKIGHSTCV 125
BLAST of mRNA_P-wetherbeei_contig53066.1.1 vs. uniprot
Match: A0A6N1VFP6_9HYPH (Extradiol ring-cleavage dioxygenase n=1 Tax=Oricola thermophila TaxID=2742145 RepID=A0A6N1VFP6_9HYPH) HSP 1 Score: 115 bits (289), Expect = 3.220e-29 Identity = 61/125 (48.80%), Postives = 71/125 (56.80%), Query Frame = 1
Query: 1 MAEIVGGFGVPHTPVFPWFVKRDGPDCETARLFSAQKEDLAATRPDVIVMFDTDHLNTFFLDNLPIFAIGVDKSFKAPNDEPREMPVYTVPSAPDLAAHIRTTAVEAGFDLALVQKFSVDHSIAV 375
MA I GG GVPHTP FP F +GPD E R F + +L PDVIV+ DTDH NTF+ DN P FAIG D +F P D+ MP + S LA H+ V FD ALV + V HSI V
Sbjct: 1 MATIAGGIGVPHTPYFPRFAAAEGPDGEINRQFGKVRAELQRHDPDVIVIVDTDHFNTFYFDNFPTFAIGCDHTFYGPVDDVALMPPRDIGSNKALALHLHRRLVAQEFDTALVTNYRVGHSIGV 125
BLAST of mRNA_P-wetherbeei_contig53066.1.1 vs. uniprot
Match: A0A6L5FEP8_9HYPH (Extradiol ring-cleavage dioxygenase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FEP8_9HYPH) HSP 1 Score: 115 bits (287), Expect = 6.110e-29 Identity = 63/125 (50.40%), Postives = 75/125 (60.00%), Query Frame = 1
Query: 1 MAEIVGGFGVPHTPVFPWFVKRDGPDCETARLFSAQKEDLAATRPDVIVMFDTDHLNTFFLDNLPIFAIGVDKSFKAPNDEPREMPVYTVPSAPDLAAHIRTTAVEAGFDLALVQKFSVDHSIAV 375
M EIV GFGV H+P P V++ G RL+ E + A +PDV+++FD DH +TFFLDN PIFAIGV PND MP Y + LAAHI V AGFDL L+Q F VDHSI V
Sbjct: 1 MGEIVAGFGVSHSPHAPEQVRKAGASHPLLRLYGRVTEAVEAVKPDVLIVFDCDHFSTFFLDNWPIFAIGVADRIAGPNDG-TVMPRYELKGHAALAAHIHRHCVTAGFDLTLLQDFEVDHSILV 124 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53066.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig53066.1.1 >prot_P-wetherbeei_contig53066.1.1 ID=prot_P-wetherbeei_contig53066.1.1|Name=mRNA_P-wetherbeei_contig53066.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=125bp MAEIVGGFGVPHTPVFPWFVKRDGPDCETARLFSAQKEDLAATRPDVIVMback to top mRNA from alignment at P-wetherbeei_contig53066:166..540+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig53066.1.1 ID=mRNA_P-wetherbeei_contig53066.1.1|Name=mRNA_P-wetherbeei_contig53066.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=375bp|location=Sequence derived from alignment at P-wetherbeei_contig53066:166..540+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig53066:166..540+ >mRNA_P-wetherbeei_contig53066.1.1 ID=mRNA_P-wetherbeei_contig53066.1.1|Name=mRNA_P-wetherbeei_contig53066.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=375bp|location=Sequence derived from alignment at P-wetherbeei_contig53066:166..540+ (Phaeothamnion wetherbeei SAG_119_79)back to top |