mRNA_P-wetherbeei_contig5291.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5291.1.1
Unique NamemRNA_P-wetherbeei_contig5291.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5291.1.1 vs. uniprot
Match: A0A8J5ZEB6_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5ZEB6_9ROSI)

HSP 1 Score: 180 bits (456), Expect = 1.660e-47
Identity = 120/299 (40.13%), Postives = 176/299 (58.86%), Query Frame = 1
Query:    1 DSELEQMDVASAYLNSLLTEEIYMKQPEGFERLRLNGQELVCLLQKSL----NKAVIQQFQTDIT--FRMKNLGQLKFLLGMEVPRDRFRRQTEVSRRKYLREILERFQTEQGKLQTTPGQSGQ*LSKAMASTNEKECRQMADVLYRAAVGSLLHTALIATPELR---------MQNPGSEHWIAVTRIFRYLIGTQEAAFIYRAQLDGTRVISYSDLDWAGDTDTPRSTTGYIFTFAGAAIS*NSRPQTTVALSSTEAECIATGTAGQEAVHLRNLLLEMGFKQEGPTILHESDASLW 852
            D ELEQ+DV +A+L+  L E+IYM+QPEGF       ++ VCLL+KSL    +K  I++ +  ++  F MK+LG  K +LGME+ RDR   +  +S++ Y+ ++L RF     K  +TP  +   LS A++  ++ E   M+ V Y +AVGSL++  + + P+L          M NPG EHW AV  I RYL GT +    +    DG  VI Y D D+AGD D  RS TGY+FT  G AIS  +  QTTVALS+TEAE +A   A +EA+ L+ L  E+    +  T+  +S ++++
Sbjct:  906 DLELEQLDVKTAFLHGELEEDIYMQQPEGFTVSE--KEDYVCLLKKSLYAAKDKGEIRKVEAQLSEEFEMKDLGPAKKILGMEILRDRKTSKLYLSQKGYIEKLLCRFNMRSAKPVSTPLAAHFRLSSALSPQSDDEIEYMSHVPYSSAVGSLMYAMVCSRPDLSYAVSAVSRYMANPGKEHWKAVQWILRYLRGTTDVCLQFGRTEDG--VIGYVDADFAGDLDRRRSLTGYVFTIGGCAISWKATLQTTVALSTTEAEYMAITEACKEAIWLKGLFSELNEDLQISTVFCDSQSAIF 1200          
BLAST of mRNA_P-wetherbeei_contig5291.1.1 vs. uniprot
Match: A0A6A2ZDM8_HIBSY (Integrase catalytic domain-containing protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2ZDM8_HIBSY)

HSP 1 Score: 178 bits (451), Expect = 7.560e-47
Identity = 117/297 (39.39%), Postives = 178/297 (59.93%), Query Frame = 1
Query:    1 DSELEQMDVASAYLNSLLTEEIYMKQPEGFERLRLNGQELVCLLQKSLNKAVIQQFQTDITFRMKNLGQLKFLLGMEVPRDRFRRQTEVSRRKYLREILERF-QTEQGKLQTTPGQSGQ*LSKAMASTNEKECRQMADVLYRAAVGSLLHTALIATPELR---------MQNPGSEHWIAVTRIFRYLIGTQEAAFIYRA-QLDGTRVISYSDLDWAGDTDTPRSTTGYIFTFAGAAIS*NSRPQTTVALSSTEAECIATGTAGQEAVHLRNLLLEMGFKQEGPTILHESDASLWAA 858
            D EL QMDV +A+LN  L EEIYM QP+GF+      +E+VC L+KSL    ++Q      F MK+ G+ K +LGM++ RD+   +  +S+++YLR++L+RF   E+ K  +TP      L  +M+  ++ E   M+ V Y + VGSL++  +   P++          M +PG EHW AV  I RY++ T +   I++  + DG  V+ Y D D+AGD D  RSTTGY+FTFA A +S  S  Q+TVALS+TEAE +A   A +EA+  + LL E+G +Q+   +  +S +++  A
Sbjct:  698 DLELVQMDVKTAFLNGDLDEEIYMTQPDGFKVAE--KEEMVCKLEKSLYG--LKQSPRQWEFEMKDFGEAKKILGMKISRDKKLGRLCLSQKEYLRKVLKRFGMNEKSKPVSTPLAPHFKLDASMSPKDDVEREYMSKVPYASVVGSLMYAMVCTRPDISQTVGVVSRYMHDPGKEHWQAVKWILRYILNTIDVGLIFQQDRQDGQCVVGYCDSDYAGDLDKRRSTTGYVFTFAKAPVSWKSTLQSTVALSTTEAEYMAVTEAMKEAIWFQGLLGELGMEQKHIKVHCDSQSAIHLA 990          
BLAST of mRNA_P-wetherbeei_contig5291.1.1 vs. uniprot
Match: A0A8J5ZW33_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5ZW33_9ROSI)

HSP 1 Score: 177 bits (448), Expect = 1.720e-46
Identity = 118/281 (41.99%), Postives = 167/281 (59.43%), Query Frame = 1
Query:    1 DSELEQMDVASAYLNSLLTEEIYMKQPEGFERLRLNGQELVCLLQKSL----NKAVIQQFQTDIT--FRMKNLGQLKFLLGMEVPRDRFRRQTEVSRRKYLREILERFQTEQGKLQTTPGQSGQ*LSKAMASTNEKECRQMADVLYRAAVGSLLHTALIATPELR---------MQNPGSEHWIAVTRIFRYLIGTQEAAFIYRAQLDGTRVISYSDLDWAGDTDTPRSTTGYIFTFAGAAIS*NSRPQTTVALSSTEAECIATGTAGQEAVHLRNLLLEM 798
            D ELEQ+DV +A+L+  L E+IYM+QPEGF       ++ VCLL+KSL    +K  I++ +  ++  F MK+LG  K +LGME+ RDR   +  +S++ Y+ ++L RF     K  +TP  +   LS A++  ++ E   M+ V Y +AVGSL++  + + P+L          M NPG EHW AV  I RYL GT +    +    DG  VI Y D D+AGD D  RS TGY+FT  G AIS  +  QTTVALS+TEAE +A   A +EA+ L+ L  E+
Sbjct:  596 DLELEQLDVKTAFLHGELEEDIYMQQPEGFTVSE--KEDYVCLLKKSLYAAKDKGEIRKVKAQLSEEFEMKDLGPAKKILGMEILRDRKTSKLYLSQKGYIEKLLCRFNMRSAKPVSTPLAAHFRLSSALSPQSDDEIEYMSHVPYSSAVGSLMYAMVCSRPDLSYAVSAVSRYMANPGKEHWKAVQWILRYLRGTTDVCLQFGRTEDG--VIGYVDADFAGDLDRRRSLTGYVFTIGGCAISWKATLQTTVALSTTEAEYMAITEACKEAIWLKGLFSEL 872          
BLAST of mRNA_P-wetherbeei_contig5291.1.1 vs. uniprot
Match: A0A2N9FZM4_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FZM4_FAGSY)

HSP 1 Score: 175 bits (444), Expect = 5.170e-46
Identity = 116/310 (37.42%), Postives = 173/310 (55.81%), Query Frame = 1
Query:    1 DSELEQMDVASAYLNSLLTEEIYMKQPEGFERLRLNGQELVCLLQKSL---NKAVIQQFQTDIT------------FRMKNLGQLKFLLGMEVPRDRFRRQTEVSRRKYLREILERFQTEQGKLQTTPGQSGQ*LSKAMASTNEKECRQMADVLYRAAVGSLLHTALIATPELR---------MQNPGSEHWIAVTRIFRYLIGTQEAAFIYRAQLDGTRVISYSDLDWAGDTDTPRSTTGYIFTFAGAAIS*NSRPQTTVALSSTEAECIATGTAGQEAVHLRNLLLEMGFKQEGPTILHESDASLWAA 858
            D ELEQ+DV +A+L+  L EEI+M Q EGF++L    + LVC L+KSL    ++  Q ++  +             F MK+LG  K +LG E+ R+R  R+  +S++ Y+R++LE F     K  +TP  +   LS      N +E   M  V Y +AVG L++  +   P+L          M+NPG EHW AV  IFRYL GT E   ++  Q +   VI Y D+D+AGD D  RSTTGY+FT +   I   S  Q+ +A+S+TEAE +    A +EA+ L+ L+ E+G  Q G  +  +S ++++ A
Sbjct:  552 DLELEQLDVKTAFLHGNLEEEIFMVQLEGFKKL--GTENLVCRLKKSLYGLKQSPRQWYKRSMCEVDRLKSLLYKEFEMKDLGAAKKILGREIRRNREARKLWLSQKNYIRKVLENFSMLDTKPVSTPLANHFRLSSNQCLKNAEEVEDMTRVSYASAVGCLMYAMVCTRPDLAHAVSTISRYMENPGKEHWNAVKWIFRYLKGTAEHGILFSRQPETNSVIGYVDVDYAGDVDDRRSTTGYLFTLSRGPICWKSTLQSIIAMSTTEAEYMTAAEAAKEALWLKGLVKELGLNQSGVQMHCDSQSAIYLA 859          
BLAST of mRNA_P-wetherbeei_contig5291.1.1 vs. uniprot
Match: A0A2N9J8U9_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9J8U9_FAGSY)

HSP 1 Score: 174 bits (442), Expect = 1.210e-45
Identity = 118/304 (38.82%), Postives = 178/304 (58.55%), Query Frame = 1
Query:    1 DSELEQMDVASAYLNSLLTEEIYMKQPEGFERLRLNGQE-LVCLLQKS------LNKAVIQQFQTDI--TFRMKNLGQLKFLLGMEVPRDRFRRQTEVSRRKYLREILERFQTEQGKLQTTPGQSGQ*LSKAMASTNEKECRQMADVLYRAAVGSLLHTALIATPELR---------MQNPGSEHWIAVTRIFRYLIGTQEAAFIYRAQ---LDGTRVISYSDLDWAGDTDTPRSTTGYIFTFAGAAIS*NSRPQTTVALSSTEAECIATGTAGQEAVHLRNLLLEMGFKQEGPTILHESDASL 849
            D ELEQMDV +A+L+  L EEIYM QPEGFE     G+E  VC L+K+       +  ++   + ++  +F MK+LG  + +LGM++ RDR  ++  +S+ KY+  +LERF  +  K  +TP      LSK    ++ KE   MA + Y +AVGSL++  +   P++          M NPG EHW AV  IFRYL G+ ++   + +    L+G     Y+D D AGD D  +ST+G++FTFAG A+S  S+ Q  VALS+TEAE IA   AG+E + ++  L ++G KQ+   +  +S ++L
Sbjct:  813 DLELEQMDVKTAFLHGDLEEEIYMVQPEGFEA---KGKEHKVCRLKKNDMLIVGQDANMVGSLKKELFKSFDMKDLGPARQILGMQILRDRKAKKLWLSQEKYVERVLERFNMKHAKPVSTPLGGHFKLSKKSCPSSNKEKENMASIPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFMVNPGKEHWEAVKWIFRYLRGSSKSCLSFGSSKPVLEG-----YTDADMAGDLDGRKSTSGFLFTFAGGAVSWQSKLQKCVALSTTEAEYIAATEAGKEMLWMKRFLQDLGLKQDEYVVHCDSQSAL 1108          
BLAST of mRNA_P-wetherbeei_contig5291.1.1 vs. uniprot
Match: A0A8J5Z708_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5Z708_9ROSI)

HSP 1 Score: 170 bits (431), Expect = 3.630e-44
Identity = 120/323 (37.15%), Postives = 176/323 (54.49%), Query Frame = 1
Query:    1 DSELEQMDVASAYLNSLLTEEIYMKQPEGFERLRLNGQELVCLLQKSL----------------------------NKAVIQQFQTDIT--FRMKNLGQLKFLLGMEVPRDRFRRQTEVSRRKYLREILERFQTEQGKLQTTPGQSGQ*LSKAMASTNEKECRQMADVLYRAAVGSLLHTALIATPELR---------MQNPGSEHWIAVTRIFRYLIGTQEAAFIYRAQLDGTRVISYSDLDWAGDTDTPRSTTGYIFTFAGAAIS*NSRPQTTVALSSTEAECIATGTAGQEAVHLRNLLLEMGFKQEGPTILHESDASLW 852
            D ELEQ+DV +A+L+  L E+IYM+QPEGF       ++ VCLL+KSL                            +K  I++ +  ++  F MK+LG  K +LGME+ RDR   +  +S++ Y+ ++L RF     K  +TP  +   LS A++  ++ E   M+ V Y +AVGSL++  + + P+L          M NPG EHW AV  I RYL GT +    +    DG  VI Y D D+AGD D  RS TGY+FT  G AIS  +  QTTVALS+TEAE +A   A +EA+ L+ L  E+    +  T+  +S ++++
Sbjct:  906 DLELEQLDVKTAFLHGELEEDIYMQQPEGFTVSE--KEDYVCLLKKSLYGLKQSPRQWYKRFDSFMTSHDFKRTAKDKGEIRKVKAQLSEEFEMKDLGPAKKILGMEILRDRKTSKLYLSQKGYIEKLLCRFNMRSAKPVSTPLAAHFRLSSALSPQSDDEIEYMSHVPYSSAVGSLMYAMVCSRPDLSYAVSAVSRYMANPGKEHWKAVQWILRYLRGTTDVCLQFGRTEDG--VIGYVDADFAGDLDRRRSLTGYVFTIGGCAISWKATLQTTVALSTTEAEYMAITEACKEAIWLKGLFSELNEDLQISTVFCDSQSAIF 1224          
BLAST of mRNA_P-wetherbeei_contig5291.1.1 vs. uniprot
Match: A0A8J5XXF9_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5XXF9_9ROSI)

HSP 1 Score: 169 bits (428), Expect = 8.860e-44
Identity = 119/323 (36.84%), Postives = 176/323 (54.49%), Query Frame = 1
Query:    1 DSELEQMDVASAYLNSLLTEEIYMKQPEGFERLRLNGQELVCLLQKSL----------------------------NKAVIQQFQTDIT--FRMKNLGQLKFLLGMEVPRDRFRRQTEVSRRKYLREILERFQTEQGKLQTTPGQSGQ*LSKAMASTNEKECRQMADVLYRAAVGSLLHTALIATPELR---------MQNPGSEHWIAVTRIFRYLIGTQEAAFIYRAQLDGTRVISYSDLDWAGDTDTPRSTTGYIFTFAGAAIS*NSRPQTTVALSSTEAECIATGTAGQEAVHLRNLLLEMGFKQEGPTILHESDASLW 852
            D ELEQ+D+ +A+L+  L E+IYM+QPEGF       ++ VCLL+KSL                            +K  I++ +  ++  F MK+LG  K +LGME+ RDR   +  +S++ Y+ ++L RF     K  +TP  +   LS A++  ++ E   M+ V Y +AVGSL++  + + P+L          M NPG EHW AV  I RYL GT +    +    DG  VI Y D D+AGD D  RS TGY+FT  G AIS  +  QTTVALS+TEAE +A   A +EA+ L+ L  E+    +  T+  +S ++++
Sbjct:  748 DLELEQLDIKTAFLHGELEEDIYMQQPEGFTVSE--KEDYVCLLKKSLYGLKQSPRQWYKRFDSFMTSHDFKRTAKDKGEIRKVKAQLSEEFEMKDLGPAKKILGMEILRDRKTSKLYLSQKGYIEKLLCRFNMRSAKPVSTPLVAHFRLSSALSLQSDDEIEYMSHVPYSSAVGSLMYAMVCSRPDLSYAVSAVSRYMANPGKEHWKAVQWILRYLRGTTDVCLQFGRTEDG--VIGYVDADFAGDLDRRRSLTGYVFTIGGCAISWKATLQTTVALSTTEAEYMAITEACKEAIWLKGLFSELNEDLQISTVFCDSQSAIF 1066          
BLAST of mRNA_P-wetherbeei_contig5291.1.1 vs. uniprot
Match: A0A2N9GK87_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GK87_FAGSY)

HSP 1 Score: 168 bits (426), Expect = 1.500e-43
Identity = 122/324 (37.65%), Postives = 177/324 (54.63%), Query Frame = 1
Query:    1 DSELEQMDVASAYLNSLLTEEIYMKQPEGFERLRLNGQE-LVCLLQKSL----------------------------NKAVIQQFQTDITFRMKNLGQLKFLLGMEVPRDRFRRQTEVSRRKYLREILERFQTEQGKLQTTPGQSGQ*LSKAMASTNEKECRQMADVLYRAAVGSLLHTALIATPELR---------MQNPGSEHWIAVTRIFRYLIGTQEAAFIYRAQ---LDGTRVISYSDLDWAGDTDTPRSTTGYIFTFAGAAIS*NSRPQTTVALSSTEAECIATGTAGQEAVHLRNLLLEMGFKQEGPTILHESDASL 849
            D ELEQMDV +A+L+  L EEIYM Q EGFE     G+E  VC L+KSL                            N  V + F++   F MK+LG  + +LGM++ RDR  ++  +S+ KY+  +LERF  +  K  +TP      LSK    ++ KE   MA + Y +AVGSL++  +   P++          M NPG EHW AV  IFRYL G+ ++   + +    L+G     Y+D D AGD D  +ST+G++FTFAG A+S  S+ Q  VALS+TEAE IA   AG+E + ++  L ++G KQ+   +  +S ++L
Sbjct:  591 DLELEQMDVKTAFLHGDLEEEIYMVQLEGFEA---KGKEHKVCRLKKSLYGLKQAPRQWYKKFDSFMVGQGYTRTDANHCVKELFKS---FDMKDLGPARQILGMQILRDRKAKKLWLSQEKYVERVLERFNMKHAKPVSTPLGGHFKLSKKSCPSSNKEKENMASIPYSSAVGSLMYAMVCTRPDIAHAVSVVSRFMVNPGKEHWEAVKWIFRYLRGSSKSCLSFGSSKPVLEG-----YTDADMAGDLDGRKSTSGFLFTFAGGAVSWQSKLQKCVALSTTEAEYIAATEAGKEMLWMKRFLQDLGLKQDEYVVHCDSQSAL 903          
BLAST of mRNA_P-wetherbeei_contig5291.1.1 vs. uniprot
Match: A0A060T044_PYCCI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=3 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060T044_PYCCI)

HSP 1 Score: 166 bits (421), Expect = 1.730e-43
Identity = 119/332 (35.84%), Postives = 161/332 (48.49%), Query Frame = 1
Query:    1 DSELEQMDVASAYLNSLLTEEIYMKQPEGFER-------------------------------LRLNGQELVC-----LLQKSLNKAVIQQFQTDIT-------------------FRMKNLGQLKFLLGMEVPRDRFRRQTEVSRRKYLREILERFQTEQGKLQTTPGQSGQ*LSKAMASTNEKECRQMADVLYRAAVGSLLHTALIATPELRM---------QNPGSEHWIAVTRIFRYLIGTQEAAFIYRAQLDGTRVISYSDLDWAGDTDTPRSTTGYIFTFAGAAIS*NSRPQTTVALSSTEAECIATGTAGQEAVHLRNLLLEMGF 804
            D ELE +D++SAYLN  L EE+YMKQPEGFE                                 +L    LVC     +  +   + +I  F  DIT                   F++++LG   +LLG+++ RDR +R   +S+R+Y  +ILER+         TP   G  LS  M  +     R+M DV Y  AVGSL + A+   P++           +NPG  HW AV  +FRY+ GT +    Y          SY+D D AG  DT RST+GY+      AIS +SR Q+ VALS+TEAE +A  +AGQE + LRNLL E GF
Sbjct:  247 DLELESVDISSAYLNGELKEEVYMKQPEGFEEKSPDWVWHLLKSLYGLKQAGRCWHEKLHEVLTKLGFDRLVCEHSVWVYLRDGVRIIISVFVDDITIASKSKDSIQRVKDELRAHFKLRDLGPTSWLLGVKIERDRAKRSLSISQRQYALDILERYGFANCDPVGTPMDPGLRLSADMGPSTPSAAREMQDVPYGQAVGSLFYLAVATRPDIARTVGNLARFSKNPGMAHWKAVKHLFRYIKGTLDYKLTYSPSSSDELFTSYTDADHAGCPDTGRSTSGYVIKMGTGAISWSSRLQSIVALSTTEAEFVAAVSAGQEVLWLRNLLTEFGF 578          
BLAST of mRNA_P-wetherbeei_contig5291.1.1 vs. uniprot
Match: A0A8J5YAB5_9ROSI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YAB5_9ROSI)

HSP 1 Score: 166 bits (420), Expect = 1.840e-43
Identity = 114/299 (38.13%), Postives = 173/299 (57.86%), Query Frame = 1
Query:    1 DSELEQMDVASAYLNSLLTEEIYMKQPEGFERLRLNGQELVCLLQKSL----NKAVIQQFQTDIT--FRMKNLGQLKFLLGMEVPRDRFRRQTEVSRRKYLREILERFQTEQGKLQTTPGQSGQ*LSKAMASTNEKECRQMADVLYRAAVGSLLHTALIATPELR---------MQNPGSEHWIAVTRIFRYLIGTQEAAFIYRAQLDGTRVISYSDLDWAGDTDTPRSTTGYIFTFAGAAIS*NSRPQTTVALSSTEAECIATGTAGQEAVHLRNLLLEMGFKQEGPTILHESDASLW 852
            D ELEQ+DV +A+L+  L ++IYM+Q EGF  +    ++ VCLL+KSL    +K  I++ +  ++  F MK+LG  K +LGME+ RDR   +  +S++ Y+ ++L RF  +  K  +TP  +   LS  ++  ++ E   M+ V Y +AVGSL++  + + P+L          M N   EHW AV  I RYL GT +    +     G  VI Y D D+AGD D  RS TGY+FT  G AIS  +  QTTVALS+TEAE +A   A +EA+ L+ L  E+    +  T+  +S ++++
Sbjct:  275 DLELEQLDVKTAFLHGELKKDIYMQQLEGF--IVSEKEDYVCLLRKSLYAAKDKGEIKKVKAQLSEEFEMKDLGPAKKILGMEILRDRKASKLYLSQKGYMEKVLCRFNMQSAKPVSTPLAAHFRLSSTLSPQSDDEIEYMSHVPYSSAVGSLMYAMVCSRPDLSYAVNAVSRYMANSDKEHWKAVQWILRYLRGTTDVCLQFGRTKYG--VIGYVDADFAGDLDRRRSDTGYVFTIGGCAISWKATLQTTVALSTTEAEYMAITEACKEAIGLKGLFSELNEDLQISTVFCDSQSAIF 569          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5291.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J5ZEB6_9ROSI1.660e-4740.13Integrase catalytic domain-containing protein n=1 ... [more]
A0A6A2ZDM8_HIBSY7.560e-4739.39Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J5ZW33_9ROSI1.720e-4641.99Uncharacterized protein n=1 Tax=Gossypium anomalum... [more]
A0A2N9FZM4_FAGSY5.170e-4637.42Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9J8U9_FAGSY1.210e-4538.82Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J5Z708_9ROSI3.630e-4437.15Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J5XXF9_9ROSI8.860e-4436.84Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9GK87_FAGSY1.500e-4337.65Integrase catalytic domain-containing protein n=1 ... [more]
A0A060T044_PYCCI1.730e-4335.84Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8J5YAB5_9ROSI1.840e-4338.13Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5291contigP-wetherbeei_contig5291:1158..2206 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog3750.XP_008392412.1
PFAMsDnaJ,TPR_8
Model size858
Max annot lvl35493|Streptophyta
KEGG koko:K09527
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.52e-11
EggNOG OGsCOG0484@1|root,COG2801@1|root,KOG0017@2759|Eukaryota,KOG0550@2759|Eukaryota,37HFU@33090|Viridiplantae,3G9NB@35493|Streptophyta,4JD7T@91835|fabids
DescriptiondnaJ homolog subfamily C member
Cds size339
COG categoryO
BRITEko00000,ko03110
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186792.7743456-UTR-P-wetherbeei_contig5291:1157..11751683186792.7743456-UTR-P-wetherbeei_contig5291:1157..1175Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5291 1158..1175 +
1683186792.8084245-UTR-P-wetherbeei_contig5291:1681..18061683186792.8084245-UTR-P-wetherbeei_contig5291:1681..1806Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5291 1682..1806 +
1683186792.8164015-UTR-P-wetherbeei_contig5291:1830..22061683186792.8164015-UTR-P-wetherbeei_contig5291:1830..2206Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5291 1831..2206 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186792.786887-CDS-P-wetherbeei_contig5291:1175..13001683186792.786887-CDS-P-wetherbeei_contig5291:1175..1300Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5291 1176..1300 +
1683186792.7982845-CDS-P-wetherbeei_contig5291:1467..16811683186792.7982845-CDS-P-wetherbeei_contig5291:1467..1681Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5291 1468..1681 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5291.1.1prot_P-wetherbeei_contig5291.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5291 1176..1681 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5291.1.1

>prot_P-wetherbeei_contig5291.1.1 ID=prot_P-wetherbeei_contig5291.1.1|Name=mRNA_P-wetherbeei_contig5291.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=113bp
MDVASAYLNSLLTEEIYMKQPEGFERLRLNGQELVCLLQKSLNKAVIQQF
QTDITFRMKNLGQLKFLLGMEVPRDRFRRQTEVSRRKYLREILERFQTEQ
GKLQTTPGQSGQ*
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mRNA from alignment at P-wetherbeei_contig5291:1158..2206+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5291.1.1 ID=mRNA_P-wetherbeei_contig5291.1.1|Name=mRNA_P-wetherbeei_contig5291.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1049bp|location=Sequence derived from alignment at P-wetherbeei_contig5291:1158..2206+ (Phaeothamnion wetherbeei SAG_119_79)
GACTCCGAGCTGGAGCAAATGGATGTAGCATCAGCATACCTCAACTCCTT ACTGACTGAGGAGATCTACATGAAGCAACCAGAGGGCTTTGAGCGATTAA GGCTCAACGGCCAAGAGCTTGTCTGTCTTCTACAGAAGAGCCTGTATGGC TAAAGCAAGCAGCAAACAATTGGCATACCATGATCAACAACTGGTTTAAG GGGCATGGCTTCACCCGTACGGCTGCAGACCTTTGTGTCTATGCGGGCCG GCAGCGCGGCGCCGTAACCATCGTGGCGCTCTACGTCAACAATCTACTAA TTGCTCGAAGCAACAAGGCCGTCATTCAACAGTTCCAGACCGACATCACT TTCCGGATGAAAAATTTAGGTCAGCTGAAATTCCTGCTAGGCATGGAAGT ACCGCGTGACAGATTCCGTCGTCAAACCGAGGTCAGCCGGCGGAAATACC TGCGAGAAATCCTGGAGCGTTTCCAAACGGAACAGGGCAAACTGCAGACA ACACCTGGTCAATCTGGGCAGTGACTCAGCAAGGCCATGGCATCTACGAA TGAGAAGGAGTGCCGGCAGATGGCCGACGTTCTCTACCGCGCGGCGGTGG GCAGTCTTCTCCACACTGCACTCATCGCAACACCTGAATTGCGAATGCAG TAAGGGCAGTCAGTAACGTTTAGGAATCCAGGCTCGGAGCACTGGATAGC GGTGACGCGCATCTTCCGCTACTTAATCGGCACTCAAGAGGCGGCGTTTA TCTACAGAGCGCAACTCGACGGTACACGCGTCATCAGTTACTCAGACTTG GACTGGGCTGGTGACACCGACACGCCGCGCTCCACAACCGGCTATATCTT TACATTTGCAGGAGCAGCGATCAGCTGAAATAGCCGTCCGCAGACGACGG TAGCGCTTTCCAGTACGGAAGCCGAATGCATTGCCACGGGCACTGCAGGA CAAGAAGCAGTTCACCTTCGAAATCTTCTGCTCGAGATGGGCTTCAAGCA GGAAGGACCCACGATTCTTCATGAGAGCGATGCATCGCTCTGGGCAGCA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5291:1158..2206+

>mRNA_P-wetherbeei_contig5291.1.1 ID=mRNA_P-wetherbeei_contig5291.1.1|Name=mRNA_P-wetherbeei_contig5291.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=339bp|location=Sequence derived from alignment at P-wetherbeei_contig5291:1158..2206+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGATGTAGCATCAGCATACCTCAACTCCTTACTGACTGAGGAGATCTA
CATGAAGCAACCAGAGGGCTTTGAGCGATTAAGGCTCAACGGCCAAGAGC
TTGTCTGTCTTCTACAGAAGAGCCTCAACAAGGCCGTCATTCAACAGTTC
CAGACCGACATCACTTTCCGGATGAAAAATTTAGGTCAGCTGAAATTCCT
GCTAGGCATGGAAGTACCGCGTGACAGATTCCGTCGTCAAACCGAGGTCA
GCCGGCGGAAATACCTGCGAGAAATCCTGGAGCGTTTCCAAACGGAACAG
GGCAAACTGCAGACAACACCTGGTCAATCTGGGCAGTGA
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