mRNA_P-wetherbeei_contig5276.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5276.3.1
Unique NamemRNA_P-wetherbeei_contig5276.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5276.3.1 vs. uniprot
Match: A0A3C0TUD7_9PROT (7,8-dihydroneopterin aldolase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TUD7_9PROT)

HSP 1 Score: 207 bits (528), Expect = 1.960e-66
Identity = 111/139 (79.86%), Postives = 118/139 (84.89%), Query Frame = 1
Query:   22 DAAARIVHL---KVADAARAERHVFIRDLLLDAHIGVHRHEKGRRQRVRINIDLTAQENGPDSGDDLANVVCYEDIVGKIKALVEEGHINLAETMAERIAARCLEDPRVVVARIRVEKLTVIAEAASVGVEIERRRTGF 429
            D A R+V L   K ADA R  RHVFIRDL+LDAHIGVH+HEKGRRQRVRINIDLT  E GPD+GDDLANVVCYEDIV K+KALVEE HINLAETMAERIA RCLED  V+ ARIRVEKLTVIAEAASVGVEIERR+  F
Sbjct:   22 DDAERVVFLSAAKPADARRQTRHVFIRDLMLDAHIGVHKHEKGRRQRVRINIDLTVLEKGPDAGDDLANVVCYEDIVDKVKALVEESHINLAETMAERIAGRCLEDLLVMAARIRVEKLTVIAEAASVGVEIERRKAEF 160          
BLAST of mRNA_P-wetherbeei_contig5276.3.1 vs. uniprot
Match: A0A351T7T5_9PROT (7,8-dihydroneopterin aldolase n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T7T5_9PROT)

HSP 1 Score: 194 bits (494), Expect = 1.300e-61
Identity = 98/133 (73.68%), Postives = 114/133 (85.71%), Query Frame = 1
Query:   31 ARIVHLKVADAARAERHVFIRDLLLDAHIGVHRHEKGRRQRVRINIDLTAQENGPDSGDDLANVVCYEDIVGKIKALVEEGHINLAETMAERIAARCLEDPRVVVARIRVEKLTVIAEAASVGVEIERRRTGF 429
            A++  L++A+AA++ RHVFIRDLLL+AHIGVHRHEKGR Q VRINIDLT +E GPD+GDDL NVVCYE +V K+K LVE  HINLAETMAERIA RC ED RV+VAR+R+EK+TVIAEAASVGVEIER R  F
Sbjct:    3 AQVTPLRIANAAQSVRHVFIRDLLLNAHIGVHRHEKGRSQPVRINIDLTVREGGPDAGDDLENVVCYEQVVDKVKELVESQHINLAETMAERIATRCFEDVRVLVARVRLEKMTVIAEAASVGVEIERTRPDF 135          
BLAST of mRNA_P-wetherbeei_contig5276.3.1 vs. uniprot
Match: A0A845QGH8_9HYPH (7,8-dihydroneopterin aldolase n=2 Tax=Pyruvatibacter mobilis TaxID=1712261 RepID=A0A845QGH8_9HYPH)

HSP 1 Score: 164 bits (415), Expect = 1.770e-49
Identity = 81/128 (63.28%), Postives = 100/128 (78.12%), Query Frame = 1
Query:   37 IVHLKVADAARAERHVFIRDLLLDAHIGVHRHEKGRRQRVRINIDLTAQENGPDSGDDLANVVCYEDIVGKIKALVEEGHINLAETMAERIAARCLEDPRVVVARIRVEKLTVIAEAASVGVEIERRR 420
            +  L++ADAAR  RHVF+RDL LDAHIGV+RHE+GR Q + IN+DLT  E   + GD++ NVVCY  +V  IKALV+EGH+ L ET+AERIA+ CLEDPRV+ AR+RVEKL  I EA SVG+EIER R
Sbjct:   14 VTPLRIADAARLTRHVFVRDLRLDAHIGVYRHEEGRTQPILINVDLTVTEGDVEIGDNIDNVVCYRSVVTNIKALVDEGHVRLVETLAERIASDCLEDPRVLAARVRVEKLEAIEEAHSVGIEIERLR 141          
BLAST of mRNA_P-wetherbeei_contig5276.3.1 vs. uniprot
Match: A0A6N6VI47_9HYPH (7,8-dihydroneopterin aldolase n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VI47_9HYPH)

HSP 1 Score: 163 bits (412), Expect = 3.580e-49
Identity = 83/124 (66.94%), Postives = 97/124 (78.23%), Query Frame = 1
Query:   49 KVADAARAERHVFIRDLLLDAHIGVHRHEKGRRQRVRINIDLTAQENGPDSGDDLANVVCYEDIVGKIKALVEEGHINLAETMAERIAARCLEDPRVVVARIRVEKLTVIAEAASVGVEIERRR 420
            K+ADAARA RHVF+RDLLLDAHIGV+ HE GR Q +R+N+DLT  E     GD  ANVVCYE++V  IKA+V  GH+NL ET+AER+AA CLED RV+ ARIR+EKL  I EA SVGVEIER R
Sbjct:   11 KIADAARAIRHVFVRDLLLDAHIGVYTHEHGRTQPIRVNVDLTVSEAA--HGDKHANVVCYEEVVNNIKAMVASGHLNLVETLAERVAASCLEDERVMAARIRIEKLAAIPEAGSVGVEIERTR 132          
BLAST of mRNA_P-wetherbeei_contig5276.3.1 vs. uniprot
Match: A0A2N3C1Z6_9PROT (7,8-dihydroneopterin aldolase n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-3 TaxID=2013666 RepID=A0A2N3C1Z6_9PROT)

HSP 1 Score: 160 bits (405), Expect = 4.420e-48
Identity = 82/128 (64.06%), Postives = 99/128 (77.34%), Query Frame = 1
Query:   37 IVHLKVADAARAERHVFIRDLLLDAHIGVHRHEKGRRQRVRINIDLTAQENGPDSGDDLANVVCYEDIVGKIKALVEEGHINLAETMAERIAARCLEDPRVVVARIRVEKLTVIAEAASVGVEIERRR 420
            +  LK+A+A RA RHVF+RDLLLDAHIGV++HEKG  Q +R+N+DLT  E     GD L NVVCY  +V +I+++V EGH+NL E++AERIA  CLED RV VARIRVEKL  I EAASVGVEIER R
Sbjct:    7 VTPLKIANAERAIRHVFVRDLLLDAHIGVYKHEKGGTQPIRVNVDLTVAEAVHGHGDSLDNVVCYATVVDRIRSIVAEGHLNLVESLAERIAGACLEDERVRVARIRVEKLAAIPEAASVGVEIERMR 134          
BLAST of mRNA_P-wetherbeei_contig5276.3.1 vs. uniprot
Match: A7HVF8_PARL1 (7,8-dihydroneopterin aldolase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) TaxID=402881 RepID=A7HVF8_PARL1)

HSP 1 Score: 159 bits (402), Expect = 1.190e-47
Identity = 84/128 (65.62%), Postives = 99/128 (77.34%), Query Frame = 1
Query:   37 IVHLKVADAARAERHVFIRDLLLDAHIGVHRHEKGRRQRVRINIDLTAQENGPDSGDDLANVVCYEDIVGKIKALVEEGHINLAETMAERIAARCLEDPRVVVARIRVEKLTVIAEAASVGVEIERRR 420
            ++ LK+A+A RA RHVFIRDL LDAHIG +RHE GR Q +R+N+DLT  E     GD L NVVCY  +V KIK++V EGH+NL ET+AERIA+ CLED RV VA IRVEKL VI EA+SVGVEIER R
Sbjct:    7 VLPLKIANAGRAIRHVFIRDLALDAHIGAYRHEVGRAQPIRVNVDLTVAEAA--HGDSLENVVCYATVVDKIKSIVSEGHLNLVETLAERIASACLEDERVEVALIRVEKLAVIPEASSVGVEIERIR 132          
BLAST of mRNA_P-wetherbeei_contig5276.3.1 vs. uniprot
Match: A0A2E1EDK9_9HYPH (7,8-dihydroneopterin aldolase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E1EDK9_9HYPH)

HSP 1 Score: 159 bits (402), Expect = 1.190e-47
Identity = 83/128 (64.84%), Postives = 99/128 (77.34%), Query Frame = 1
Query:   37 IVHLKVADAARAERHVFIRDLLLDAHIGVHRHEKGRRQRVRINIDLTAQENGPDSGDDLANVVCYEDIVGKIKALVEEGHINLAETMAERIAARCLEDPRVVVARIRVEKLTVIAEAASVGVEIERRR 420
            +  LK+A+A RA RHVF+RDLLLDAHIGV++HEKG  Q +R+N+DLT  E     GD L NVVCY+ +V +IK +V EGH+NL ET+AERIA  CLED RV VAR+RVEKL  IAEA SVGVEIER R
Sbjct:    7 VAPLKIANAERAIRHVFVRDLLLDAHIGVYKHEKGGTQPIRVNVDLTVAEAV--HGDSLDNVVCYKSVVDRIKEIVAEGHLNLVETLAERIAGSCLEDERVRVARVRVEKLAAIAEAVSVGVEIERVR 132          
BLAST of mRNA_P-wetherbeei_contig5276.3.1 vs. uniprot
Match: A0A2D8RWS5_9HYPH (7,8-dihydroneopterin aldolase n=3 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2D8RWS5_9HYPH)

HSP 1 Score: 158 bits (400), Expect = 2.390e-47
Identity = 85/128 (66.41%), Postives = 98/128 (76.56%), Query Frame = 1
Query:   37 IVHLKVADAARAERHVFIRDLLLDAHIGVHRHEKGRRQRVRINIDLTAQENGPDSGDDLANVVCYEDIVGKIKALVEEGHINLAETMAERIAARCLEDPRVVVARIRVEKLTVIAEAASVGVEIERRR 420
            I  LK+A+A RA RHVFIRDLLLDAHIGV++HEKG  Q VR+N+DLT  E      D L NVVCY+ +V +IKA+V EGH+NL ET+AERIA  CLED RV VAR+RVEKL  I EA SVGVEIER R
Sbjct:    7 IAPLKIANAERAIRHVFIRDLLLDAHIGVYKHEKGGTQPVRVNVDLTVTEVA--HADSLDNVVCYKTVVDQIKAIVAEGHLNLVETLAERIAGSCLEDARVRVARVRVEKLAAIPEAVSVGVEIERLR 132          
BLAST of mRNA_P-wetherbeei_contig5276.3.1 vs. uniprot
Match: A0A2D4VII7_9HYPH (7,8-dihydroneopterin aldolase n=2 Tax=Parvibaculum TaxID=256616 RepID=A0A2D4VII7_9HYPH)

HSP 1 Score: 158 bits (400), Expect = 2.390e-47
Identity = 82/128 (64.06%), Postives = 98/128 (76.56%), Query Frame = 1
Query:   37 IVHLKVADAARAERHVFIRDLLLDAHIGVHRHEKGRRQRVRINIDLTAQENGPDSGDDLANVVCYEDIVGKIKALVEEGHINLAETMAERIAARCLEDPRVVVARIRVEKLTVIAEAASVGVEIERRR 420
            +  LK+ADA R  RHVF+RDLLLDAHIGV++HE G  Q +R+N+DL+  E     GD L NVVCY  +V +IKA+V+EGH+NL ET+AERIAA CLED RV  AR+RVEKL VI EAA VGVEIER R
Sbjct:    7 VTPLKIADAERGLRHVFVRDLLLDAHIGVYKHELGSAQPIRVNVDLSVSE--APHGDALDNVVCYATVVDRIKAIVDEGHLNLVETLAERIAAVCLEDERVQTARVRVEKLAVIPEAAGVGVEIERHR 132          
BLAST of mRNA_P-wetherbeei_contig5276.3.1 vs. uniprot
Match: A0A2E5BTN8_9HYPH (7,8-dihydroneopterin aldolase n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2E5BTN8_9HYPH)

HSP 1 Score: 157 bits (396), Expect = 1.210e-46
Identity = 87/141 (61.70%), Postives = 103/141 (73.05%), Query Frame = 1
Query:    1 MKQFEDRDAAARIVHLKVADAARAERHVFIRDLLLDAHIGVHRHEK-GRRQRVRINIDLTAQENGPDSGDDLANVVCYEDIVGKIKALVEEGHINLAETMAERIAARCLEDPRVVVARIRVEKLTVIAEAASVGVEIERRR 420
            M Q      A  +  L++ADA +A RHVF+RDL+L+  IGV+ HEK G RQ +R NIDLT +E     GD L NVVCYE+IV K+KAL+ EGH+NL ET+AERIA+RCLED RV  ARIRVEKL  IAE ASVGVEIER R
Sbjct:    1 MSQTISNSDADNVTRLQIADATKAIRHVFVRDLVLEGEIGVYAHEKDGFRQPMRFNIDLTVREVA--HGDALENVVCYEEIVNKVKALIAEGHVNLVETLAERIASRCLEDARVERARIRVEKLAAIAETASVGVEIERGR 139          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5276.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TUD7_9PROT1.960e-6679.867,8-dihydroneopterin aldolase n=1 Tax=Alphaproteob... [more]
A0A351T7T5_9PROT1.300e-6173.687,8-dihydroneopterin aldolase n=2 Tax=Alphaproteob... [more]
A0A845QGH8_9HYPH1.770e-4963.287,8-dihydroneopterin aldolase n=2 Tax=Pyruvatibact... [more]
A0A6N6VI47_9HYPH3.580e-4966.947,8-dihydroneopterin aldolase n=1 Tax=Parvibaculum... [more]
A0A2N3C1Z6_9PROT4.420e-4864.067,8-dihydroneopterin aldolase n=1 Tax=Alphaproteob... [more]
A7HVF8_PARL11.190e-4765.637,8-dihydroneopterin aldolase n=1 Tax=Parvibaculum... [more]
A0A2E1EDK9_9HYPH1.190e-4764.847,8-dihydroneopterin aldolase n=3 Tax=Alphaproteob... [more]
A0A2D8RWS5_9HYPH2.390e-4766.417,8-dihydroneopterin aldolase n=3 Tax=Hyphomicrobi... [more]
A0A2D4VII7_9HYPH2.390e-4764.067,8-dihydroneopterin aldolase n=2 Tax=Parvibaculum... [more]
A0A2E5BTN8_9HYPH1.210e-4661.707,8-dihydroneopterin aldolase n=1 Tax=Rhodobiaceae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5276contigP-wetherbeei_contig5276:3100..3531 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog402881.Plav_2277
PFAMsFolB
Model size432
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00721,RC00943,RC01479,RC03333,RC03334
KEGG koko:K01633
KEGG ReactionR03504,R11037,R11073
KEGG Pathwayko00790,ko01100,map00790,map01100
KEGG ModuleM00126,M00840
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.94e-48
EggNOG OGsCOG1539@1|root,COG1539@2|Bacteria,1PSIH@1224|Proteobacteria,2V9CM@28211|Alphaproteobacteria,1JQI1@119043|Rhodobiaceae
EC1.13.11.81,4.1.2.25,5.1.99.8
DescriptionDihydroneopterin aldolase
Cds size432
COG categoryH
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186790.7309353-CDS-P-wetherbeei_contig5276:3099..35311683186790.7309353-CDS-P-wetherbeei_contig5276:3099..3531Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5276 3100..3531 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5276.3.1prot_P-wetherbeei_contig5276.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5276 3100..3531 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5276.3.1

>prot_P-wetherbeei_contig5276.3.1 ID=prot_P-wetherbeei_contig5276.3.1|Name=mRNA_P-wetherbeei_contig5276.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=144bp
MKQFEDRDAAARIVHLKVADAARAERHVFIRDLLLDAHIGVHRHEKGRRQ
RVRINIDLTAQENGPDSGDDLANVVCYEDIVGKIKALVEEGHINLAETMA
ERIAARCLEDPRVVVARIRVEKLTVIAEAASVGVEIERRRTGF*
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mRNA from alignment at P-wetherbeei_contig5276:3100..3531-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5276.3.1 ID=mRNA_P-wetherbeei_contig5276.3.1|Name=mRNA_P-wetherbeei_contig5276.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=432bp|location=Sequence derived from alignment at P-wetherbeei_contig5276:3100..3531- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAACAGTTTGAAGACAGAGACGCCGCAGCACGGATTGTGCATTTGAA AGTCGCCGACGCCGCGCGCGCGGAACGCCATGTGTTTATCCGCGATCTGC TGCTGGATGCGCATATTGGCGTGCATCGCCACGAAAAAGGCCGCCGCCAG CGGGTGCGCATCAATATAGACCTGACCGCGCAGGAAAACGGCCCCGATTC CGGCGACGATCTGGCGAATGTGGTGTGTTACGAAGACATTGTCGGCAAAA TCAAGGCGCTGGTTGAAGAAGGCCATATCAATCTGGCGGAAACCATGGCG GAACGTATCGCGGCGCGCTGTCTGGAAGACCCCCGGGTCGTCGTGGCCCG CATCCGGGTGGAAAAGCTGACGGTCATCGCCGAGGCAGCCAGCGTCGGTG TGGAAATCGAACGCCGCCGGACAGGTTTTTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5276:3100..3531-

>mRNA_P-wetherbeei_contig5276.3.1 ID=mRNA_P-wetherbeei_contig5276.3.1|Name=mRNA_P-wetherbeei_contig5276.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=432bp|location=Sequence derived from alignment at P-wetherbeei_contig5276:3100..3531- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAACAGTTTGAAGACAGAGACGCCGCAGCACGGATTGTGCATTTGAA
AGTCGCCGACGCCGCGCGCGCGGAACGCCATGTGTTTATCCGCGATCTGC
TGCTGGATGCGCATATTGGCGTGCATCGCCACGAAAAAGGCCGCCGCCAG
CGGGTGCGCATCAATATAGACCTGACCGCGCAGGAAAACGGCCCCGATTC
CGGCGACGATCTGGCGAATGTGGTGTGTTACGAAGACATTGTCGGCAAAA
TCAAGGCGCTGGTTGAAGAAGGCCATATCAATCTGGCGGAAACCATGGCG
GAACGTATCGCGGCGCGCTGTCTGGAAGACCCCCGGGTCGTCGTGGCCCG
CATCCGGGTGGAAAAGCTGACGGTCATCGCCGAGGCAGCCAGCGTCGGTG
TGGAAATCGAACGCCGCCGGACAGGTTTTTAG
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