mRNA_P-wetherbeei_contig52669.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52669.1.1 vs. uniprot
Match: A0A2E4QVC5_9PROT (Uncharacterized protein n=1 Tax=Hirschia sp. TaxID=2024835 RepID=A0A2E4QVC5_9PROT) HSP 1 Score: 127 bits (318), Expect = 1.170e-33 Identity = 70/158 (44.30%), Postives = 93/158 (58.86%), Query Frame = 1
Query: 1 LGRNLELHLPAVPGYPETLNATQTVVGQYGERRAAFQAILTLSPKTAEVVLTTPGGPRILTITWTEAGIVEDRTPLAPADLKGINVLGDIFVSLWPLASLRDALPPG-VTAEENGSKRTVKAADRTIAEVDTLEKTDALWRQKLTNLDFGYSLTIITE 471
+ ++EL LP +PGYP+ QT+VG+Y R AFQA L+LSP EVVL P GPR++ +TWTE GI E R+ LAP DL G+N+L DIF+S WP S+ DALP V +G++ R I D +LT++ GY L II+E
Sbjct: 52 IAEDVELTLPLMPGYPQDALLFQTLVGRYDGRTRAFQATLSLSPDRVEVVLLAPSGPRVMQLTWTEQGIEETRSNLAPEDLNGLNILADIFLSTWPKQSVIDALPDNAVLLTGDGNREIWSGKQRLIDLEDGGVDEQGRKHARLTHVQRGYVLDIISE 209
BLAST of mRNA_P-wetherbeei_contig52669.1.1 vs. uniprot
Match: UPI00143D68D4 (DUF3261 domain-containing protein n=1 Tax=Brevundimonas sp. M20 TaxID=2591463 RepID=UPI00143D68D4) HSP 1 Score: 115 bits (288), Expect = 2.660e-29 Identity = 65/153 (42.48%), Postives = 92/153 (60.13%), Query Frame = 1
Query: 10 NLELHLPAVPGYPETLNATQTVVGQYGERRAAFQAILTLSPKTAEVVLTTPGGP-RILTITWTEAGIVEDRTPLAPADLKGINVLGDIFVSLWPLASLRDALPPGVTAEENGSK-RTVKAADRTIAEVDTLEKTDALWRQKLTNLDFGYSLTI 462
++ L LP+ P YP+T Q ++G+R+AAF++IL LSP E+V+T GG R+ TITWT AG+ E R+P+AP + N+L DIF++LWP ++ ALP GVT E R V+ D I+E+ A R+ NL FGY +TI
Sbjct: 45 DIVLTLPSPPAYPQTRTLMQAGQIRHGDRQAAFESILALSPDEVEIVITMAGGGLRLSTITWTAAGVRETRSPIAPDSIPVANILADIFIALWPAEAINAALPEGVTLTETADGGRQVRRGDELISEIVPDAANPA--RRVSRNLAFGYEVTI 195
BLAST of mRNA_P-wetherbeei_contig52669.1.1 vs. uniprot
Match: A0A514C2W6_9CAUL (DUF3261 domain-containing protein n=1 Tax=Brevundimonas sp. M20 TaxID=2591463 RepID=A0A514C2W6_9CAUL) HSP 1 Score: 115 bits (288), Expect = 1.060e-28 Identity = 65/153 (42.48%), Postives = 92/153 (60.13%), Query Frame = 1
Query: 10 NLELHLPAVPGYPETLNATQTVVGQYGERRAAFQAILTLSPKTAEVVLTTPGGP-RILTITWTEAGIVEDRTPLAPADLKGINVLGDIFVSLWPLASLRDALPPGVTAEENGSK-RTVKAADRTIAEVDTLEKTDALWRQKLTNLDFGYSLTI 462
++ L LP+ P YP+T Q ++G+R+AAF++IL LSP E+V+T GG R+ TITWT AG+ E R+P+AP + N+L DIF++LWP ++ ALP GVT E R V+ D I+E+ A R+ NL FGY +TI
Sbjct: 102 DIVLTLPSPPAYPQTRTLMQAGQIRHGDRQAAFESILALSPDEVEIVITMAGGGLRLSTITWTAAGVRETRSPIAPDSIPVANILADIFIALWPAEAINAALPEGVTLTETADGGRQVRRGDELISEIVPDAANPA--RRVSRNLAFGYEVTI 252
BLAST of mRNA_P-wetherbeei_contig52669.1.1 vs. uniprot
Match: A0A2T6F9S8_9BURK (DUF3261 domain-containing protein n=1 Tax=Glaciimonas sp. PCH181 TaxID=2133943 RepID=A0A2T6F9S8_9BURK) HSP 1 Score: 68.9 bits (167), Expect = 2.630e-11 Identity = 42/142 (29.58%), Postives = 72/142 (50.70%), Query Frame = 1
Query: 52 TLNATQTVVGQYGERRAAFQAILTLSPKTAEVVLTTPGGPRILTITWTEAGIVEDRTPLAPADLKGINVLGDIFVSLWPLASLRDALPPGVTAEENGSKRTVKAADRTIAEVDTLEKTDALWRQKLTNLDFGYSLTIITEKG 477
T++ Q + + R A L + P+ +V G R+LT+ + + R P+ P+ ++ +VL D ++LWP+A++R ALPPG E+ G +RT+ D + ++ + LTNL + Y LTI +E G
Sbjct: 48 TISLQQHLTVERNGRTDQLDAALEIDPQQLTMV-GLAFGQRVLTLHYDGQNLQSWRHPMLPSQVRAEDVLEDTQLTLWPVAAIRQALPPGWKIEQQGLRRTISLDDVPVTVINYSSAVPWGCKVALTNLRYHYRLTIESEGG 188
BLAST of mRNA_P-wetherbeei_contig52669.1.1 vs. uniprot
Match: UPI0010BFD81D (DUF3261 domain-containing protein n=1 Tax=Massilia sp. HP4 TaxID=2562316 RepID=UPI0010BFD81D) HSP 1 Score: 67.8 bits (164), Expect = 4.640e-11 Identity = 40/140 (28.57%), Postives = 72/140 (51.43%), Query Frame = 1
Query: 49 ETLNATQTVVGQYGERRAAFQAILTLSPKTAEVVLTTPGGPRILTITWTEAGIVEDRTPLAPADLKGINVLGDIFVSLWPLASLRDALPPGVTAEENGSKRTVKAADRTIAEVDTLEKTDALWRQKLTNLDFGYSLTIIT 468
ET++ Q + + G A L + P+ +V G R+L++ + + E R P+ P+ ++ +VL D+ ++LWPLA + ALPPG T E+ G +RT++ +A +D L N+ + Y LT+++
Sbjct: 45 ETISVQQQLTVERGGSTNDLVAALEVDPQRVSLVGLALG-LRVLSLEFDGKELTEWRHPMLPSQVRAADVLEDLQLTLWPLAEIARALPPGWTIEDQGLRRTLRREGELVATIDYSGMPRWTGTAVLDNVRYKYRLTVVS 183
BLAST of mRNA_P-wetherbeei_contig52669.1.1 vs. uniprot
Match: A0A1I1QPJ1_9BURK (Uncharacterized protein n=4 Tax=Cupriavidus TaxID=106589 RepID=A0A1I1QPJ1_9BURK) HSP 1 Score: 64.3 bits (155), Expect = 1.170e-9 Identity = 38/106 (35.85%), Postives = 57/106 (53.77%), Query Frame = 1
Query: 163 GGPRILTITWTEAGIVEDRTPLAPADLKGINVLGDIFVSLWPLASLRDALPPGVTAEENGSKRTVKAADRTIAEVDTLEKTDALWRQKLTNLDFGYSLTIITEKGE 480
GG + + W + + R P APA+L +L D+ +SLWP+A++R ALPPG + + R + A D +AE+ DA + + D GY LTI T +GE
Sbjct: 95 GGQVLARLDWDGSDLHVTRAPWAPAELVPERILSDLQLSLWPVAAIRAALPPGWRLDATPAMRRLLAGDELVAEI---RYPDAATTEFVQRRD-GYRLTIRTLQGE 196
BLAST of mRNA_P-wetherbeei_contig52669.1.1 vs. uniprot
Match: A0A1I1DPL4_9BURK (Uncharacterized protein n=1 Tax=Collimonas sp. OK412 TaxID=1801619 RepID=A0A1I1DPL4_9BURK) HSP 1 Score: 63.2 bits (152), Expect = 3.300e-9 Identity = 32/99 (32.32%), Postives = 56/99 (56.57%), Query Frame = 1
Query: 166 GPRILTITWTEAGIVEDRTPLAPADLKGINVLGDIFVSLWPLASLRDALPPGVTAEENGSKRTVKAADRTIAEVDTLEKTDALWRQKLTNLDFGYSLTI 462
G R+L++ + + R P+ P+ ++ +V+ D ++LWPLA++R+ALPPG E+ G +RT+ + +D T + +L NL + Y LTI
Sbjct: 87 GQRVLSMNYDGKTLQSWRHPMLPSQVRVEDVMEDTQLTLWPLAAIREALPPGWQIEQQGLRRTLSLQGEPVMVIDYSAPTPWDGKVELNNLRYHYHLTI 185
BLAST of mRNA_P-wetherbeei_contig52669.1.1 vs. uniprot
Match: G0AK46_COLFT (Uncharacterized protein n=1 Tax=Collimonas fungivorans (strain Ter331) TaxID=1005048 RepID=G0AK46_COLFT) HSP 1 Score: 61.6 bits (148), Expect = 1.280e-8 Identity = 32/99 (32.32%), Postives = 55/99 (55.56%), Query Frame = 1
Query: 166 GPRILTITWTEAGIVEDRTPLAPADLKGINVLGDIFVSLWPLASLRDALPPGVTAEENGSKRTVKAADRTIAEVDTLEKTDALWRQKLTNLDFGYSLTI 462
G R+L++ + + R P+ P+ ++ +V+ D ++LWPLA++R ALPPG E+ G +RT+ + +D T + +L NL + Y LTI
Sbjct: 93 GQRVLSMNYDGKTLQSWRHPMLPSQVRVEDVMEDTQLTLWPLAAIRAALPPGWQIEQQGLRRTLSLQGEPVMVIDYSTPTPWDGKVELNNLRYHYHLTI 191
BLAST of mRNA_P-wetherbeei_contig52669.1.1 vs. uniprot
Match: A0A2S9H5A3_9BURK (Uncharacterized protein n=1 Tax=Solimicrobium silvestre TaxID=2099400 RepID=A0A2S9H5A3_9BURK) HSP 1 Score: 58.2 bits (139), Expect = 1.870e-7 Identity = 31/99 (31.31%), Postives = 52/99 (52.53%), Query Frame = 1
Query: 166 GPRILTITWTEAGIVEDRTPLAPADLKGINVLGDIFVSLWPLASLRDALPPGVTAEENGSKRTVKAADRTIAEVDTLEKTDALWRQKLTNLDFGYSLTI 462
G R+L++ + + R + P ++ ++L DI ++LWP+ S+R ALP G T E+NG +RT+ + ++ KL NL + YSL I
Sbjct: 81 GQRVLSLNYDGKQVSSWRHVMLPKQVRAEDILEDIQLTLWPIESIRKALPSGWTIEDNGLRRTLMMGGEVVCIINYSAMPRWSGTVKLENLRYHYSLII 179
BLAST of mRNA_P-wetherbeei_contig52669.1.1 vs. uniprot
Match: UPI001E4C3AF1 (DUF3261 domain-containing protein n=2 Tax=Cupriavidus TaxID=106589 RepID=UPI001E4C3AF1) HSP 1 Score: 55.8 bits (133), Expect = 1.680e-6 Identity = 37/127 (29.13%), Postives = 59/127 (46.46%), Query Frame = 1
Query: 88 GERRAAFQAILTLSPKTAEVVLTTPGGPRILTITWTEAGIVEDRTPLAPADLKGINVLGDIFVSLWPLASLRDALPPGVTAEENGSKRTVKAADRTIAEVDTLEKTDALWRQKLTNLDFGYSLTIIT 468
GE QA+L + GG + + W + R+P APA+L +L ++ +SLWP+A++ ALPPG + +R ++A T+AE+ + + Q GY LTI T
Sbjct: 73 GEEHREIQALLEADAAHTRLAALA-GGQVLARLDWDGRDLRVARSPWAPAELVPERILSEMQLSLWPVAAIAAALPPGWRLDAVAGRRVLRAGGETVAEIRYPDAQTIEFEQYRD----GYRLTIRT 194 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52669.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52669.1.1 >prot_P-wetherbeei_contig52669.1.1 ID=prot_P-wetherbeei_contig52669.1.1|Name=mRNA_P-wetherbeei_contig52669.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=161bp LGRNLELHLPAVPGYPETLNATQTVVGQYGERRAAFQAILTLSPKTAEVVback to top mRNA from alignment at P-wetherbeei_contig52669:61..543- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52669.1.1 ID=mRNA_P-wetherbeei_contig52669.1.1|Name=mRNA_P-wetherbeei_contig52669.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=483bp|location=Sequence derived from alignment at P-wetherbeei_contig52669:61..543- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52669:61..543- >mRNA_P-wetherbeei_contig52669.1.1 ID=mRNA_P-wetherbeei_contig52669.1.1|Name=mRNA_P-wetherbeei_contig52669.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=483bp|location=Sequence derived from alignment at P-wetherbeei_contig52669:61..543- (Phaeothamnion wetherbeei SAG_119_79)back to top |