mRNA_P-wetherbeei_contig52282.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig52282.1.1
Unique NamemRNA_P-wetherbeei_contig52282.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig52282.1.1 vs. uniprot
Match: A0A1T4JTS8_9HYPH (Putative_PNPOx domain-containing protein n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4JTS8_9HYPH)

HSP 1 Score: 192 bits (487), Expect = 2.280e-60
Identity = 91/107 (85.05%), Postives = 99/107 (92.52%), Query Frame = 1 
Query:    1 MDSPEDAMFSAAVKAEQARLGSRAQFEDRDWQSEITDDLRQFLAVVDTFFLATASADGRPYVQHRGGPPGFLKPIGTHTLAFADLAGNRQYISLGHLKENDRAHIFI 321
            M  PED +FS+AVKAEQARLGSRA FE R+WQ+EITD+LRQFLAV+DTFFLATASADGRPYVQHRGGPPGFLKP G+HTLAFAD AGNRQYI+LGHL ENDRAHIFI
Sbjct:    1 MSDPEDVLFSSAVKAEQARLGSRASFEGREWQTEITDNLRQFLAVIDTFFLATASADGRPYVQHRGGPPGFLKPFGSHTLAFADFAGNRQYITLGHLNENDRAHIFI 107
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BLAST of mRNA_P-wetherbeei_contig52282.1.1 vs. uniprot
Match: A0A512NEN1_9HYPH (Pyridoxamine 5'-phosphate oxidase n=1 Tax=Reyranella soli TaxID=1230389 RepID=A0A512NEN1_9HYPH)

HSP 1 Score: 191 bits (486), Expect = 3.140e-60
Identity = 90/107 (84.11%), Postives = 100/107 (93.46%), Query Frame = 1 
Query:    1 MDSPEDAMFSAAVKAEQARLGSRAQFEDRDWQSEITDDLRQFLAVVDTFFLATASADGRPYVQHRGGPPGFLKPIGTHTLAFADLAGNRQYISLGHLKENDRAHIFI 321
            M +PED MFS AVKAEQ RLGSRA FEDRDW++EITDDLRQFLA++DTFFLATASADG+PY+QHRGGPPGFLK IGTH+LAFAD AGNRQYI+LGHLKENDRAHIF+
Sbjct:    1 MTNPEDVMFSPAVKAEQMRLGSRALFEDRDWKTEITDDLRQFLAIIDTFFLATASADGQPYIQHRGGPPGFLKTIGTHSLAFADFAGNRQYITLGHLKENDRAHIFL 107
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BLAST of mRNA_P-wetherbeei_contig52282.1.1 vs. uniprot
Match: A0A1E4HTR6_9PROT (Pyridoxamine 5'-phosphate oxidase n=8 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1E4HTR6_9PROT)

HSP 1 Score: 190 bits (482), Expect = 1.490e-59
Identity = 89/107 (83.18%), Postives = 97/107 (90.65%), Query Frame = 1 
Query:    1 MDSPEDAMFSAAVKAEQARLGSRAQFEDRDWQSEITDDLRQFLAVVDTFFLATASADGRPYVQHRGGPPGFLKPIGTHTLAFADLAGNRQYISLGHLKENDRAHIFI 321
            M+ P+D +FS AVKAEQ RLGSRAQFE R W +EITDDLRQFL V+DTFF ATASADGRPY+QHRGGPPGFLKPIG+HTLAFAD AGNRQYISLGHL+ENDRAHIFI
Sbjct:    1 MEDPDDVLFSPAVKAEQTRLGSRAQFEGRTWNTEITDDLRQFLGVIDTFFFATASADGRPYIQHRGGPPGFLKPIGSHTLAFADFAGNRQYISLGHLRENDRAHIFI 107
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BLAST of mRNA_P-wetherbeei_contig52282.1.1 vs. uniprot
Match: A0A1F2ZUA6_9PROT (Pyridoxamine 5'-phosphate oxidase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1F2ZUA6_9PROT)

HSP 1 Score: 186 bits (472), Expect = 4.220e-58
Identity = 90/107 (84.11%), Postives = 95/107 (88.79%), Query Frame = 1 
Query:    1 MDSPEDAMFSAAVKAEQARLGSRAQFEDRDWQSEITDDLRQFLAVVDTFFLATASADGRPYVQHRGGPPGFLKPIGTHTLAFADLAGNRQYISLGHLKENDRAHIFI 321
            M  PED +FS AVKAEQ RLGSRAQFE R W+SEITDDLRQFLA +DTFF ATASADGRPYVQHRGGP GFLKPIG+H LAFAD AGNRQYI+LGHLKENDRAHIFI
Sbjct:    1 MSGPEDVLFSPAVKAEQMRLGSRAQFEGRAWKSEITDDLRQFLAAIDTFFFATASADGRPYVQHRGGPAGFLKPIGSHMLAFADFAGNRQYITLGHLKENDRAHIFI 107
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BLAST of mRNA_P-wetherbeei_contig52282.1.1 vs. uniprot
Match: A0A1H8QCW9_9PROT (Putative_PNPOx domain-containing protein n=2 Tax=unclassified Rhodospirillales TaxID=941843 RepID=A0A1H8QCW9_9PROT)

HSP 1 Score: 184 bits (468), Expect = 1.710e-57
Identity = 87/107 (81.31%), Postives = 95/107 (88.79%), Query Frame = 1 
Query:    1 MDSPEDAMFSAAVKAEQARLGSRAQFEDRDWQSEITDDLRQFLAVVDTFFLATASADGRPYVQHRGGPPGFLKPIGTHTLAFADLAGNRQYISLGHLKENDRAHIFI 321
            M  PED MFS AVKAEQ RLGSR QFEDRDW++EITDDLRQFL  +DTFF ATASADG+PY+QHRGGPPGFLK IG+ TLAFAD AGNRQYI+LGHLKENDRAHIF+
Sbjct:    1 MTGPEDVMFSPAVKAEQMRLGSRLQFEDRDWKTEITDDLRQFLGAIDTFFFATASADGQPYIQHRGGPPGFLKTIGSQTLAFADFAGNRQYITLGHLKENDRAHIFL 107
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BLAST of mRNA_P-wetherbeei_contig52282.1.1 vs. uniprot
Match: A0A259MI05_9PROT (Pyridoxamine 5'-phosphate oxidase n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A259MI05_9PROT)

HSP 1 Score: 184 bits (468), Expect = 1.710e-57
Identity = 87/107 (81.31%), Postives = 94/107 (87.85%), Query Frame = 1 
Query:    1 MDSPEDAMFSAAVKAEQARLGSRAQFEDRDWQSEITDDLRQFLAVVDTFFLATASADGRPYVQHRGGPPGFLKPIGTHTLAFADLAGNRQYISLGHLKENDRAHIFI 321
            M  PED MFSA VKAEQ RLGSR QFE R W +EITDDLR+FL V+DTFF ATASADGRPY+QHRGGPPGFLKPIGT TLAFAD AGN+QYISLGHL+ENDRAHIF+
Sbjct:    1 MSDPEDVMFSAGVKAEQTRLGSRPQFEGRTWNTEITDDLRRFLGVIDTFFFATASADGRPYIQHRGGPPGFLKPIGTDTLAFADFAGNQQYISLGHLRENDRAHIFV 107
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BLAST of mRNA_P-wetherbeei_contig52282.1.1 vs. uniprot
Match: A0A537MYV9_9PROT (Pyridoxamine 5'-phosphate oxidase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537MYV9_9PROT)

HSP 1 Score: 178 bits (451), Expect = 6.770e-55
Identity = 86/107 (80.37%), Postives = 93/107 (86.92%), Query Frame = 1 
Query:    1 MDSPEDAMFSAAVKAEQARLGSRAQFEDRDWQSEITDDLRQFLAVVDTFFLATASADGRPYVQHRGGPPGFLKPIGTHTLAFADLAGNRQYISLGHLKENDRAHIFI 321
            M  PED +FSAAVKAEQ RLGSRA+F DR+W +EITD+LRQFL  +DTFFLATASADGRPYVQHRGGPPGFLK IG   LAFAD  GNRQYI+LGHLKENDRAHIFI
Sbjct:    1 MSGPEDVLFSAAVKAEQERLGSRAKFTDREWATEITDNLRQFLDAIDTFFLATASADGRPYVQHRGGPPGFLKAIGPKLLAFADFGGNRQYITLGHLKENDRAHIFI 107
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BLAST of mRNA_P-wetherbeei_contig52282.1.1 vs. uniprot
Match: A0A5C8PC04_9HYPH (Pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Vineibacter terrae TaxID=2586908 RepID=A0A5C8PC04_9HYPH)

HSP 1 Score: 139 bits (351), Expect = 1.340e-39
Identity = 68/108 (62.96%), Postives = 82/108 (75.93%), Query Frame = 1 
Query:   10 PEDAMFSAAVKAEQARLGSRAQFE----DRDWQSEITDDLRQFLAVVDTFFLATASADGRPYVQHRGGPPGFLKPIGTHTLAFADLAGNRQYISLGHLKENDRAHIFI 321
            P D  F+ +VKA Q RLGSR++ E    DR WQ+E+TDDL  FLA++DTFF ATASA G+PY+QHRGGPPGFL+ I   TL FAD  GNRQYI++G+L EN R HIFI
Sbjct:   10 PCDVAFTPSVKAAQTRLGSRSRMERLESDRPWQTEVTDDLGAFLAIIDTFFFATASAAGQPYIQHRGGPPGFLRVIDKRTLGFADFRGNRQYITVGNLAENPRCHIFI 117
[Close]
BLAST of mRNA_P-wetherbeei_contig52282.1.1 vs. uniprot
Match: A0A5C5TIL9_9HYPH (Pyridoxamine 5'-phosphate oxidase n=2 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5TIL9_9HYPH)

HSP 1 Score: 138 bits (348), Expect = 4.140e-39
Identity = 69/108 (63.89%), Postives = 80/108 (74.07%), Query Frame = 1 
Query:   10 PEDAMFSAAVKAEQARLGSRAQFE----DRDWQSEITDDLRQFLAVVDTFFLATASADGRPYVQHRGGPPGFLKPIGTHTLAFADLAGNRQYISLGHLKENDRAHIFI 321
            P D  F+ +VKA Q+RLGSRA  E    +R W +E+TDDL  FL VVD FF ATASADG+PY+QHRGGPPGFLK I   TL FAD  GNRQYI++G+L EN R HIFI
Sbjct:   13 PCDVAFTPSVKAAQSRLGSRAHMERMEGERPWLTEVTDDLATFLTVVDAFFFATASADGQPYIQHRGGPPGFLKVIDKRTLGFADFRGNRQYITVGNLAENPRCHIFI 120
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BLAST of mRNA_P-wetherbeei_contig52282.1.1 vs. uniprot
Match: UPI0019AFBC9F (Pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=UPI0019AFBC9F)

HSP 1 Score: 129 bits (323), Expect = 2.570e-36
Identity = 61/108 (56.48%), Postives = 81/108 (75.00%), Query Frame = 1 
Query:   10 PEDAMFSAAVKAEQARLGSRAQF----EDRDWQSEITDDLRQFLAVVDTFFLATASADGRPYVQHRGGPPGFLKPIGTHTLAFADLAGNRQYISLGHLKENDRAHIFI 321
            P D  F+ AVKA QA+ GSR  +    E R W +EIT+DL +F+A   +FFLATA+A+G+PY+QHRGGPPGFL+ + +HTL FAD  GNRQYIS+G+L EN + H+F+
Sbjct:    6 PSDVAFTPAVKAIQAQKGSREAYARVEEGRGWNTEITEDLAEFIAHQRSFFLATANAEGQPYIQHRGGPPGFLRVVDSHTLGFADFRGNRQYISIGNLGENPKVHLFL 113
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52282.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1T4JTS8_9HYPH2.280e-6085.05Putative_PNPOx domain-containing protein n=1 Tax=E... [more]
A0A512NEN1_9HYPH3.140e-6084.11Pyridoxamine 5'-phosphate oxidase n=1 Tax=Reyranel... [more]
A0A1E4HTR6_9PROT1.490e-5983.18Pyridoxamine 5'-phosphate oxidase n=8 Tax=Alphapro... [more]
A0A1F2ZUA6_9PROT4.220e-5884.11Pyridoxamine 5'-phosphate oxidase n=2 Tax=Alphapro... [more]
A0A1H8QCW9_9PROT1.710e-5781.31Putative_PNPOx domain-containing protein n=2 Tax=u... [more]
A0A259MI05_9PROT1.710e-5781.31Pyridoxamine 5'-phosphate oxidase n=2 Tax=Rhodospi... [more]
A0A537MYV9_9PROT6.770e-5580.37Pyridoxamine 5'-phosphate oxidase n=1 Tax=Alphapro... [more]
A0A5C8PC04_9HYPH1.340e-3962.96Pyridoxamine 5'-phosphate oxidase family protein n... [more]
A0A5C5TIL9_9HYPH4.140e-3963.89Pyridoxamine 5'-phosphate oxidase n=2 Tax=Reyranel... [more]
UPI0019AFBC9F2.570e-3656.48Pyridoxamine 5'-phosphate oxidase family protein n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig52282contigP-wetherbeei_contig52282:3..323 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1205680.CAKO01000029_gene5168
PFAMsPutative_PNPOx
Model size321
Max annot lvl204441|Rhodospirillales
KEGG koko:K07006
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.44e-60
EggNOG OGsCOG3576@1|root,COG3576@2|Bacteria,1NBWC@1224|Proteobacteria,2TUCA@28211|Alphaproteobacteria,2JX6U@204441|Rhodospirillales
DescriptionPfam:Pyridox_oxidase
Cds size321
COG categoryS
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186784.0080354-CDS-P-wetherbeei_contig52282:2..3231683186784.0080354-CDS-P-wetherbeei_contig52282:2..323Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig52282 3..323 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig52282.1.1prot_P-wetherbeei_contig52282.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig52282 3..323 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig52282.1.1

>prot_P-wetherbeei_contig52282.1.1 ID=prot_P-wetherbeei_contig52282.1.1|Name=mRNA_P-wetherbeei_contig52282.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=107bp
MDSPEDAMFSAAVKAEQARLGSRAQFEDRDWQSEITDDLRQFLAVVDTFF
LATASADGRPYVQHRGGPPGFLKPIGTHTLAFADLAGNRQYISLGHLKEN
DRAHIFI
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mRNA from alignment at P-wetherbeei_contig52282:3..323-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig52282.1.1 ID=mRNA_P-wetherbeei_contig52282.1.1|Name=mRNA_P-wetherbeei_contig52282.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=321bp|location=Sequence derived from alignment at P-wetherbeei_contig52282:3..323- (Phaeothamnion wetherbeei SAG_119_79)
ATGGACAGCCCCGAAGATGCGATGTTCTCGGCCGCGGTCAAGGCGGAGCA
GGCGCGTCTCGGATCGCGCGCCCAGTTCGAGGACCGCGACTGGCAATCGG
AGATCACCGACGATCTGCGTCAATTCCTGGCTGTCGTCGACACCTTCTTC
CTGGCGACGGCCAGCGCCGATGGCCGGCCCTACGTGCAGCATCGCGGCGG
CCCGCCGGGCTTCCTGAAGCCGATCGGCACCCACACGTTGGCCTTCGCCG
ACTTAGCCGGCAACCGCCAGTACATCTCGCTCGGCCACCTCAAGGAAAAC
GACCGCGCCCACATCTTCATT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig52282:3..323-

>mRNA_P-wetherbeei_contig52282.1.1 ID=mRNA_P-wetherbeei_contig52282.1.1|Name=mRNA_P-wetherbeei_contig52282.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=321bp|location=Sequence derived from alignment at P-wetherbeei_contig52282:3..323- (Phaeothamnion wetherbeei SAG_119_79)
ATGGACAGCCCCGAAGATGCGATGTTCTCGGCCGCGGTCAAGGCGGAGCA
GGCGCGTCTCGGATCGCGCGCCCAGTTCGAGGACCGCGACTGGCAATCGG
AGATCACCGACGATCTGCGTCAATTCCTGGCTGTCGTCGACACCTTCTTC
CTGGCGACGGCCAGCGCCGATGGCCGGCCCTACGTGCAGCATCGCGGCGG
CCCGCCGGGCTTCCTGAAGCCGATCGGCACCCACACGTTGGCCTTCGCCG
ACTTAGCCGGCAACCGCCAGTACATCTCGCTCGGCCACCTCAAGGAAAAC
GACCGCGCCCACATCTTCATT
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