mRNA_P-wetherbeei_contig52243.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig52243.1.1
Unique NamemRNA_P-wetherbeei_contig52243.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig52243.1.1 vs. uniprot
Match: A0A7D5NDS4_9PROT (Glycosyltransferase n=1 Tax=Candidatus Accumulibacter sp. TaxID=2053492 RepID=A0A7D5NDS4_9PROT)

HSP 1 Score: 197 bits (501), Expect = 4.680e-56
Identity = 108/182 (59.34%), Postives = 120/182 (65.93%), Query Frame = 1
Query:    1 DVMLNVSRFEGLSMAVREALAAGLPVVATDVGGQRENRDDALTLMPPEASAGTISQALALLPVRTLLAPRQSARLPRAWSLTLCAHRHGPAGTDTLLVTANLNAGGAQRSLVNLAVPLARRHRLAVAVVGRSTQAEFADTLVAGGVRAFRCAEARDPLAAAESLLAWAARHGVKNLCFWNVD 546
            DV+LNVSRFEG SMAVREAL  GLPV+AT VGGQ E   D L L+PP+A    I++ LA LPVR  L      R PR WSLT    R G    +TL VTANLNAGGAQRSLVNL   +A +H LAVAV G +TQ  FADTL   GV  FR     DP A AESLL WA  H ++ LCFWNVD
Sbjct:  281 DVLLNVSRFEGFSMAVREALVVGLPVLATAVGGQGERAHDGLRLLPPDAPDALIAEHLAALPVRDTLTGESLPRAPRLWSLTTAWQRPGKRRVETLFVTANLNAGGAQRSLVNLVTQIAAQHPLAVAVCGETTQRAFADTLAQHGVETFRPTAQADPYALAESLLGWAGAHALRTLCFWNVD 462          
BLAST of mRNA_P-wetherbeei_contig52243.1.1 vs. uniprot
Match: A0A2U1RXM3_9PROT (Glycos_transf_1 domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A2U1RXM3_9PROT)

HSP 1 Score: 194 bits (492), Expect = 1.060e-54
Identity = 116/181 (64.09%), Postives = 125/181 (69.06%), Query Frame = 1
Query:    1 DVMLNVSRFEGLSMAVREALAAGLPVVATDVGGQRENRDDALTLMPPEASAGTISQALALLPVRTLLAPRQSARLPRAWSLTLCAHRHGPAGTDTLLVTANLNAGGAQRSLVNLAVPLARRHRLAVAVVGRSTQAEFADTLVAGGVRAFRCAEARDPLAAAESLLAWAARHGVKNLCFWNV 543
            D +LNVSRFEGLS+AV+EALAAGLPVVA DVGGQRE    AL L+PP A A   ++ LA  PVRT L PR  AR PRAWSLTL   R       TLLVTANLNAGGAQRSLVNLA  LA RH +AVAV G STQ  FA  L   GV AFR A   D LA AESLLA A+    + LCFWNV
Sbjct:  280 DALLNVSRFEGLSIAVQEALAAGLPVVAADVGGQREIDHPALELLPPGAGADAFAKRLARHPVRTRLEPRPFARAPRAWSLTLAHRRPSGPAIATLLVTANLNAGGAQRSLVNLARSLAGRHAIAVAVCGVSTQGAFAAGLRERGVEAFRVAATPDDLAIAESLLAHASARRARALCFWNV 460          
BLAST of mRNA_P-wetherbeei_contig52243.1.1 vs. uniprot
Match: A0A1P8FNQ1_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium GR16-43 TaxID=1904640 RepID=A0A1P8FNQ1_9PROT)

HSP 1 Score: 187 bits (474), Expect = 4.320e-52
Identity = 112/186 (60.22%), Postives = 125/186 (67.20%), Query Frame = 1
Query:    1 DVMLNVSRFEGLSMAVREALAAGLPVVATDVGGQRENRDDALTLMPPEASAGTISQALALLPVRTLLAPRQSARLPRAWSLTLCAHRHGPAGTDTLLVTANLNAGGAQRSLVNLAVPLARR-----HRLAVAVVGRSTQAEFADTLVAGGVRAFRCAEARDPLAAAESLLAWAARHGVKNLCFWNV 543
            DV+LN SRFEGLS+A +EALAAGLPVVATDVGGQ E   DAL L+P +AS       LA LPVR  LA    AR PRA SL L +     AG DTL VTANLNAGGAQRSLVNLA  LA+      H  AVAV G ST   FAD L+A G+  FR +  RD LA AESLLA A+R   +N+CFWNV
Sbjct:  279 DVLLNTSRFEGLSIAAQEALAAGLPVVATDVGGQSEIDHDALQLLPADASIADFEARLAALPVRDSLAGTPFARSPRAGSLALASRPAQGAGIDTLFVTANLNAGGAQRSLVNLATTLAQDREPGVHAFAVAVCGESTHDAFADGLLAAGIECFRASAERDDLAIAESLLAHASRRRARNVCFWNV 464          
BLAST of mRNA_P-wetherbeei_contig52243.1.1 vs. uniprot
Match: A0A080M0W3_9PROT (GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase n=1 Tax=Candidatus Accumulibacter sp. SK-02 TaxID=1453999 RepID=A0A080M0W3_9PROT)

HSP 1 Score: 175 bits (443), Expect = 1.190e-49
Identity = 97/169 (57.40%), Postives = 108/169 (63.91%), Query Frame = 1
Query:   40 MAVREALAAGLPVVATDVGGQRENRDDALTLMPPEASAGTISQALALLPVRTLLAPRQSARLPRAWSLTLCAHRHGPAGTDTLLVTANLNAGGAQRSLVNLAVPLARRHRLAVAVVGRSTQAEFADTLVAGGVRAFRCAEARDPLAAAESLLAWAARHGVKNLCFWNVD 546
            MAVREAL  GLPV+AT VGGQ E   D L L+PP+A    I++ LA LPVR  L      R PR WSLT    R G    +TL VTANLNAGGAQRSLVNL   +A +H LAVAV G +TQ  FADTL   GV  FR     DP A AESLL WA  H ++ LCFWNVD
Sbjct:    1 MAVREALVVGLPVLATAVGGQGERAHDGLRLLPPDAPDALIAEHLAALPVRDTLTGESLPRAPRLWSLTTAWQRPGKRRVETLFVTANLNAGGAQRSLVNLVTQIAAQHPLAVAVCGETTQRAFADTLAQHGVETFRPTAQADPYALAESLLGWAGAHALRTLCFWNVD 169          
BLAST of mRNA_P-wetherbeei_contig52243.1.1 vs. uniprot
Match: A0A6M4GVM8_9PROT (D-inositol-3-phosphate glycosyltransferase n=1 Tax=Usitatibacter rugosus TaxID=2732067 RepID=A0A6M4GVM8_9PROT)

HSP 1 Score: 173 bits (438), Expect = 4.900e-47
Identity = 109/186 (58.60%), Postives = 120/186 (64.52%), Query Frame = 1
Query:    1 DVMLNVSRFEGLSMAVREALAAGLPVVATDVGGQRENRDDALTLMPPEASAGTISQALALLPVRTLLAPRQSARLPRAWSLTLCAHRHGP-AGTDTLLVTANLNAGGAQRSLVNLAVPLA-----RRHRLAVAVVGRSTQAEFADTLVAGGVRAFRCAEARDPLAAAESLLAWAARHGVKNLCFWN 540
            D +LN SRFEGLS+A +EALAAGLPVVATDVGGQ E     L L+P  AS    +  LA+LPVR  L P   AR PRA SL+L  HR  P A  DTL VTANLNAGGAQRSLVNL   L       RH  AVAV G ST + FA  L++ GV  FR    RD  A AESLLA AAR G + LCFWN
Sbjct:  279 DALLNTSRFEGLSIAAQEALAAGLPVVATDVGGQSEIHHAGLQLLPARASVREFAARLAVLPVRERLQPSPFARAPRAASLSL-THRERPVAPIDTLFVTANLNAGGAQRSLVNLVRTLRADRVRERHAFAVAVCGESTHSAFAMELMSAGVDCFRATLDRDDAAIAESLLAQAARRGARTLCFWN 463          
BLAST of mRNA_P-wetherbeei_contig52243.1.1 vs. uniprot
Match: A0A1W9LVM4_9DELT (Uncharacterized protein n=1 Tax=Desulfobulbaceae bacterium A2 TaxID=1934250 RepID=A0A1W9LVM4_9DELT)

HSP 1 Score: 164 bits (414), Expect = 1.050e-43
Identity = 96/182 (52.75%), Postives = 111/182 (60.99%), Query Frame = 1
Query:    1 DVMLNVSRFEGLSMAVREALAAGLPVVATDVGGQRENRDDALTLMPPEASAGTISQALALLPVRTLLAPRQSARLPRAWSLTLCAHRHGPAGTDTLLVTANLNAGGAQRSLVNLAVPLARRHRLAVAVVGRSTQAEFADTLVAGGVRAFRCAEARDPLAAAESLLAWAARHGVKNLCFWNVD 546
            D +LN+SR EGLS+A +EALAAGLPVVAT VGGQ E     L L+P  A+    +  LA  PVR       + R PR WS+     R   AG DTL VTANLNAGGAQRSLVNL + LARRHRLA+AV G +T   F   L    +  FR A   DP  AAE +LA A   G + LC WNVD
Sbjct:  281 DALLNMSRHEGLSLATQEALAAGLPVVATAVGGQAEITHPNLYLLPATAAVADFAMQLAGFPVRQAPVCEAAPRFPRLWSVAAGLRRCAGAGLDTLFVTANLNAGGAQRSLVNLVLSLARRHRLAIAVCGETTHPAFPVRLAREQIPCFRPATTADPFEAAEGILARATAAGARTLCCWNVD 462          
BLAST of mRNA_P-wetherbeei_contig52243.1.1 vs. uniprot
Match: A0A522W1I9_9PROT (Glycosyltransferase n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A522W1I9_9PROT)

HSP 1 Score: 127 bits (320), Expect = 7.550e-31
Identity = 90/189 (47.62%), Postives = 104/189 (55.03%), Query Frame = 1
Query:    1 DVMLNVSRFEGLSMAVREALAAGLPVVATDVGGQRENRDDALTLMPPEASAGTISQALALLPVRTLLAPRQSARLP-----RAWSLTLCAHRHGP--AGTDTLLVTANLNAGGAQRSLVNLAVPLARRHRLAVAVVGRSTQAEFADTLVAGGVRAFRCAEARDPLAAAESLLAWAARHGVKNLCFWNVD 546
            DV+LN SR EGLSMA  EAL AG+PVVA+ VGGQ E  D  L L+P ++  G   QA+       L A R+ A        R W+L   AH   P  A    L VTANLNAGGAQRSLVNLA  +  R R  +AV G ST AEF D L A G+   R A +RD    AE LL          + FWNVD
Sbjct:  303 DVLLNTSRHEGLSMATLEALQAGVPVVASRVGGQGEVSDPKLVLLPFDSGDGHWLQAID----SALGAKREGAAWTGFPAYRLWTL---AHLAAPYAARAHVLFVTANLNAGGAQRSLVNLACAIRDRARFTIAVSGDSTSAEFLDQLRAAGIDVVRTAASRDAFEQAEGLLELCRERASDTIVFWNVD 484          
BLAST of mRNA_P-wetherbeei_contig52243.1.1 vs. uniprot
Match: A0A1F4DA82_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DA82_9PROT)

HSP 1 Score: 120 bits (301), Expect = 2.710e-28
Identity = 84/186 (45.16%), Postives = 102/186 (54.84%), Query Frame = 1
Query:    1 DVMLNVSRFEGLSMAVREALAAGLPVVATDVGGQRENRDDALTLMPPEAS----AGTISQALALLPVRTLLAPRQSARLPRAWSLTLCAHRHGPAGTDTLLVTANLNAGGAQRSLVNLAVPLARRHRLAVAVVGRSTQAEFADTLVAGGVRAFRCAEARDPLAAAESLLAWAARHGVKNLCFWNVD 546
            D++LN SR+EGLS+A  EAL AGLPVVA+DVGGQ E     L L+P  AS    A  +  AL   P         S RL   + L     R    G D L VTANLNAGGAQRSLVNLA+ L    R  +AV G S+ A F+  L    +R +R A +RD    AE++L          +CFWNVD
Sbjct:  291 DLLLNTSRYEGLSIATLEALVAGLPVVASDVGGQGEISAPGLALLPFAASDIAWACAVDTALRRRPALPAWRGFPSHRLWTLFHLLPPLER----GADVLFVTANLNAGGAQRSLVNLALALKESLRFEIAVCGNSSSAHFSHKLEQAELRVYRSAASRDCFDHAEAILRRIVAGRFGTVCFWNVD 472          
BLAST of mRNA_P-wetherbeei_contig52243.1.1 vs. uniprot
Match: A0A521VEV8_9PROT (Glycosyltransferase (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521VEV8_9PROT)

HSP 1 Score: 117 bits (293), Expect = 3.180e-27
Identity = 87/194 (44.85%), Postives = 98/194 (50.52%), Query Frame = 1
Query:    1 DVMLNVSRFEGLSMAVREALAAGLPVVATDVGGQRENRDDALTLMPP----EASAGTISQALALLPVRTLLAPRQSARLPRAWS------LTLCAHRHGP--AGTDTLLVTANLNAGGAQRSLVNLAVPLARRHRLAVAVVGRSTQAEFADTLVAGGVRAFRCAEARDPLAAAESLLAWAARHGVKNLCFWNVD 546
            DV+LN S  EGLSMA  EAL AG+PVVA+ VGGQ E  D  L L+PP    EA    I +AL             + R P AW       L   AH   P  A    L VTANLNAGGAQRSLVNLA  L  R R  +AV G S  AEF   L   G+   R A  RD    AE+LL          + FWN+D
Sbjct:  286 DVLLNTSTHEGLSMATLEALQAGVPVVASRVGGQGEIDDAKLFLLPPDVGDEAWTAAIQEALG------------AQREPAAWRDFPAYRLWTLAHLAAPYAARAHVLFVTANLNAGGAQRSLVNLAYALRDRLRFTIAVTGGSATAEFVGWLRDPGIDVVRTAPGRDAFDHAEALLRICRERACDTVAFWNLD 467          
BLAST of mRNA_P-wetherbeei_contig52243.1.1 vs. uniprot
Match: A0A837I107_9BACT (Uncharacterized protein n=4 Tax=Parcubacteria group TaxID=1794811 RepID=A0A837I107_9BACT)

HSP 1 Score: 113 bits (282), Expect = 9.800e-26
Identity = 76/185 (41.08%), Postives = 105/185 (56.76%), Query Frame = 1
Query:    1 DVMLNVSRFEGLSMAVREALAAGLPVVATDVGGQRENRDDALTLMPPEASAGTISQALALLPVRTLLAPR-QSARLPRAWSLTLCAHRHGPAGTD--TLLVTANLNAGGAQRSLVNLAVPLARRHRLAVAVVGRSTQAEFADTLVAGGVRAFRCAEARDPLAAAESLLAWAARHGVKNLCFWNVD 546
            DV+LN SR+EGLS+A  EAL  GLPVVA+ VGGQ E   DAL L+P  AS      AL     +    P+  S    + W+L   A    P  T+   L VTANLN+GGAQRSLVNL+  L  + +L + V G +T + F + L    V+  R A++ D  + +E+++    +  +  +CFWNVD
Sbjct:  275 DVILNTSRYEGLSIATLEALIHGLPVVASKVGGQGELGGDALILIPEGASVEQWVSALEKSFYKKFSRPKWASFSAHKLWTLASLAK---PVATNGKILFVTANLNSGGAQRSLVNLSKSLKGKLQLKIVVAGNTTTSYFYEELKKANVKVMRAADSWDAFSYSENIVREICQEQIGTVCFWNVD 456          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52243.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D5NDS4_9PROT4.680e-5659.34Glycosyltransferase n=1 Tax=Candidatus Accumulibac... [more]
A0A2U1RXM3_9PROT1.060e-5464.09Glycos_transf_1 domain-containing protein n=1 Tax=... [more]
A0A1P8FNQ1_9PROT4.320e-5260.22Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A080M0W3_9PROT1.190e-4957.40GDP-mannose-dependent alpha-(1-6)-phosphatidylinos... [more]
A0A6M4GVM8_9PROT4.900e-4758.60D-inositol-3-phosphate glycosyltransferase n=1 Tax... [more]
A0A1W9LVM4_9DELT1.050e-4352.75Uncharacterized protein n=1 Tax=Desulfobulbaceae b... [more]
A0A522W1I9_9PROT7.550e-3147.62Glycosyltransferase n=2 Tax=Betaproteobacteria bac... [more]
A0A1F4DA82_9PROT2.710e-2845.16Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A521VEV8_9PROT3.180e-2744.85Glycosyltransferase (Fragment) n=1 Tax=Betaproteob... [more]
A0A837I107_9BACT9.800e-2641.08Uncharacterized protein n=4 Tax=Parcubacteria grou... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig52243contigP-wetherbeei_contig52243:1..546 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1403819.BATR01000181_gene6199
PFAMsGlyco_trans_1_4,Glyco_transf_4
Model size546
Max annot lvl74201|Verrucomicrobia
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.84e-12
EggNOG OGsCOG0438@1|root,COG0438@2|Bacteria,46TTQ@74201|Verrucomicrobia
DescriptionGlycosyltransferase Family 4
Cds size540
COG categoryM
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186783.490045-UTR-P-wetherbeei_contig52243:0..61683186783.490045-UTR-P-wetherbeei_contig52243:0..6Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig52243 1..6 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186783.4987836-CDS-P-wetherbeei_contig52243:6..5461683186783.4987836-CDS-P-wetherbeei_contig52243:6..546Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig52243 7..546 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig52243.1.1prot_P-wetherbeei_contig52243.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig52243 7..546 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig52243.1.1

>prot_P-wetherbeei_contig52243.1.1 ID=prot_P-wetherbeei_contig52243.1.1|Name=mRNA_P-wetherbeei_contig52243.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=180bp
MLNVSRFEGLSMAVREALAAGLPVVATDVGGQRENRDDALTLMPPEASAG
TISQALALLPVRTLLAPRQSARLPRAWSLTLCAHRHGPAGTDTLLVTANL
NAGGAQRSLVNLAVPLARRHRLAVAVVGRSTQAEFADTLVAGGVRAFRCA
EARDPLAAAESLLAWAARHGVKNLCFWNVD
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mRNA from alignment at P-wetherbeei_contig52243:1..546+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig52243.1.1 ID=mRNA_P-wetherbeei_contig52243.1.1|Name=mRNA_P-wetherbeei_contig52243.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=546bp|location=Sequence derived from alignment at P-wetherbeei_contig52243:1..546+ (Phaeothamnion wetherbeei SAG_119_79)
GACGTAATGCTCAATGTCAGCCGCTTCGAAGGCCTGTCGATGGCGGTGCG TGAGGCCTTGGCTGCCGGGTTGCCGGTGGTGGCCACCGACGTCGGCGGGC AGCGCGAGAACCGGGACGATGCTCTTACCCTGATGCCGCCGGAGGCGAGT GCCGGCACGATTTCACAGGCACTGGCACTTTTGCCAGTGCGGACCCTGCT TGCGCCGCGGCAATCCGCACGCCTGCCACGGGCCTGGTCGCTCACCCTGT GCGCGCACCGGCATGGTCCGGCCGGCACGGACACGCTTCTGGTCACTGCC AACCTCAATGCCGGAGGCGCGCAACGCTCGCTGGTCAATCTGGCAGTGCC GCTGGCGCGGCGTCACCGGCTTGCCGTCGCAGTGGTGGGCCGCAGTACAC AGGCCGAATTCGCAGACACGCTGGTCGCCGGCGGGGTGCGGGCGTTCCGG TGTGCGGAAGCGCGGGATCCGTTGGCTGCGGCCGAATCGCTGCTTGCATG GGCAGCACGCCACGGGGTGAAGAACCTGTGCTTCTGGAATGTTGAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig52243:1..546+

>mRNA_P-wetherbeei_contig52243.1.1 ID=mRNA_P-wetherbeei_contig52243.1.1|Name=mRNA_P-wetherbeei_contig52243.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=540bp|location=Sequence derived from alignment at P-wetherbeei_contig52243:1..546+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTCAATGTCAGCCGCTTCGAAGGCCTGTCGATGGCGGTGCGTGAGGC
CTTGGCTGCCGGGTTGCCGGTGGTGGCCACCGACGTCGGCGGGCAGCGCG
AGAACCGGGACGATGCTCTTACCCTGATGCCGCCGGAGGCGAGTGCCGGC
ACGATTTCACAGGCACTGGCACTTTTGCCAGTGCGGACCCTGCTTGCGCC
GCGGCAATCCGCACGCCTGCCACGGGCCTGGTCGCTCACCCTGTGCGCGC
ACCGGCATGGTCCGGCCGGCACGGACACGCTTCTGGTCACTGCCAACCTC
AATGCCGGAGGCGCGCAACGCTCGCTGGTCAATCTGGCAGTGCCGCTGGC
GCGGCGTCACCGGCTTGCCGTCGCAGTGGTGGGCCGCAGTACACAGGCCG
AATTCGCAGACACGCTGGTCGCCGGCGGGGTGCGGGCGTTCCGGTGTGCG
GAAGCGCGGGATCCGTTGGCTGCGGCCGAATCGCTGCTTGCATGGGCAGC
ACGCCACGGGGTGAAGAACCTGTGCTTCTGGAATGTTGAC
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