mRNA_P-wetherbeei_contig5201.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5201.2.1
Unique NamemRNA_P-wetherbeei_contig5201.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5201.2.1 vs. uniprot
Match: A0A835ZCC3_9STRA (Nuf2 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCC3_9STRA)

HSP 1 Score: 238 bits (608), Expect = 8.280e-73
Identity = 136/241 (56.43%), Postives = 160/241 (66.39%), Query Frame = 1
Query:   22 AVGGYSFPTLKGNRILECLQDLQIPMTEECLINPENHADGVQRVFERLVEATTGVTREGLGQPVFAGLNVLNYAELHDESIPELAFFRACNKMMEMSCVFDFRLKDLLHPNKNRLRRHLSAVINFCKFREERMMVYTALVARKEELLARRTAAAHDKARLEEELAALRRQTAEKAKIVXXXXXXXXXXXXXIADRNRQQAEIRHEGSLLKRTANDLKDRLAALALGMEEARIDRDRLMAQV 744
            A G YSFPTLK   ILE LQ LQIP +EE L NP+ +   VQ VF +LVE T GVTRE + QPVFAGLNVLNYA+LH++S+PELAFFRA +KMM  SCV DF   DL  PNK RL+R LSAVINFC FRE RM VY AL   KE LLA   A   D  RLE ELA+L  +T+++A                I+  NR+QA  R +   LKR AN LKDRLAAL L  +EA ++R+RL AQ+
Sbjct:   14 AAGVYSFPTLKAKLILERLQQLQIPTSEETLDNPQKNVQEVQNVFAKLVEFTMGVTREEMNQPVFAGLNVLNYAQLHEDSVPELAFFRAVSKMMTASCVHDFSFNDLQTPNKTRLKRQLSAVINFCMFREGRMQVYNALATEKENLLANVQALGEDNERLERELASLTERTSQEAAETEMVEADCRAMEAQISALNREQAATRAQSGDLKRQANGLKDRLAALDLETKEAIMERERLQAQI 254          
BLAST of mRNA_P-wetherbeei_contig5201.2.1 vs. uniprot
Match: W7TPN5_9STRA (Kinetochore protein Nuf2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPN5_9STRA)

HSP 1 Score: 194 bits (493), Expect = 2.770e-55
Identity = 100/241 (41.49%), Postives = 152/241 (63.07%), Query Frame = 1
Query:   22 AVGGYSFPTLKGNRILECLQDLQIPMTEECLINPENHADGVQRVFERLVEATTGVTREGLGQPVFAGLNVLNYAELHDESIPELAFFRACNKMMEMSCVFDFRLKDLLHPNKNRLRRHLSAVINFCKFREERMMVYTALVARKEELLARRTAAAHDKARLEEELAALRRQTAEKAKIVXXXXXXXXXXXXXIADRNRQQAEIRHEGSLLKRTANDLKDRLAALALGMEEARIDRDRLMAQV 744
            +V  +SFP LK   IL+C+ +LQ+ +TE  +   + H D ++R +E LVE  TG+T+E + QP F+G+N LNY ELH+ESIPELAFFRAC KMM +  V DF +KDLL P   R+RRHLSA+INF KFREER+++Y+ L  +++ELL        ++  + +EL  LR Q A +++ +             +   N++QAEIR +G+ LK+ + DLK+ +   +  +E    +R++   Q+
Sbjct:   34 SVQAFSFPILKTPDILQCMHELQVRLTEAEINEADKHRDAIRRAYEYLVEICTGITKEEMSQPAFSGINALNYPELHEESIPELAFFRACTKMMTVCGVHDFSMKDLLSPEPKRVRRHLSAIINFAKFREERLVMYSELAVKRDELLDNLKRLQDEEVGVAKELGVLREQAAAESEEMEGLEQACEVAEAELEQLNKRQAEIRAQGAELKKQSQDLKESIGKASSALESGIEEREKTRGQI 274          
BLAST of mRNA_P-wetherbeei_contig5201.2.1 vs. uniprot
Match: A0A4D9D8Z4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8Z4_9STRA)

HSP 1 Score: 193 bits (491), Expect = 1.220e-52
Identity = 100/241 (41.49%), Postives = 151/241 (62.66%), Query Frame = 1
Query:   22 AVGGYSFPTLKGNRILECLQDLQIPMTEECLINPENHADGVQRVFERLVEATTGVTREGLGQPVFAGLNVLNYAELHDESIPELAFFRACNKMMEMSCVFDFRLKDLLHPNKNRLRRHLSAVINFCKFREERMMVYTALVARKEELLARRTAAAHDKARLEEELAALRRQTAEKAKIVXXXXXXXXXXXXXIADRNRQQAEIRHEGSLLKRTANDLKDRLAALALGMEEARIDRDRLMAQV 744
            +V  +SFP LK   IL+C+ +LQ+ +TE  +   + H D ++R +E LVE  TG+T+E + QP F+G+N LNY ELH+ESIPELAFFRAC KMM +  V DF +KDLL P   R+RRHLSA+INF KFREER+++Y+ L  +++ELL        ++  + +EL  LR Q A + + +             +   N++QAEIR +G+ LK+ + DLK+ +   +  +E    +R++   Q+
Sbjct:  688 SVQAFSFPILKTPDILQCMHELQVRLTEAEINEADKHRDAIRRAYEYLVEICTGITKEEMSQPAFSGINALNYPELHEESIPELAFFRACTKMMTVCGVHDFSMKDLLSPEPKRVRRHLSAIINFAKFREERLVMYSELAVKRDELLDNLKRLQDEEVGVAKELGVLREQAAAEREEMEGLEQACEVAEAELEQLNKRQAEIRAQGAELKKQSQDLKESIGKASSALESGIEEREKTRGQI 928          
BLAST of mRNA_P-wetherbeei_contig5201.2.1 vs. uniprot
Match: A0A7R9U8B6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8B6_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.130e-49
Identity = 103/244 (42.21%), Postives = 136/244 (55.74%), Query Frame = 1
Query:   34 YSFPTLKGNRILECLQDLQIPMTEECLINPENHADGVQRVFERLVEATTGVTREGLGQPVFAGLNVLNYAELHDESIPELAFFRACNKMMEMSCVFDFRLKDLLHPNKNRLRRHLSAVINFCKFREERMMVYTALVARKEELLARRTAAAHDKARLEEELAALRRQTAEKAKIVXXXXXXXXXXXXXIADRNRQQAEIRHEGSLLKRTANDLKDRLAALALGMEEARIDRDRLMAQVCGRVAGE 765
            +SFP L    +  C+ DLQI + EE L  P  H D V+R FE  +E  T VTRE L QP F+GL  LNY ELH+ESIP LAFFRA  K+M    V DF + D+L P+  RLR+ LSA INF KFREER++++T L   +   +    AA  +KA L+ EL  L+  TAE+   +             I   NR+QA ++ E    K+   + K+ LA L   +E    DR+RL +QV    A E
Sbjct:    6 FSFPILSARELCLCMTDLQISLPEEALAEPSKHKDAVRRCFEAFIELCTDVTREELNQPAFSGLEALNYPELHEESIPALAFFRAVGKLMHTCGVSDFTIGDVLSPSPKRLRKCLSAAINFAKFREERLLLFTELTEERASTMETLAAAQQEKAALQAELDRLKELTAEEDAEIHAERSACESLAEEIEVLNREQARLKGESREKKQLTTNRKEVLAKLVSQLENLAEDRERLRSQVVRSPARE 249          
BLAST of mRNA_P-wetherbeei_contig5201.2.1 vs. uniprot
Match: A0A662XCM7_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCM7_9STRA)

HSP 1 Score: 162 bits (411), Expect = 1.390e-43
Identity = 109/239 (45.61%), Postives = 148/239 (61.92%), Query Frame = 1
Query:   28 GGYSFPTLKGNRILECLQDLQIPMTEECLINPENHADGVQRVFERLVEATTGVTREGLGQPVFAGLNVLNYAELHDESIPELAFFRACNKMMEMSCVFDFRLKDLLHPNKNRLRRHLSAVINFCKFREERMMVYTALVARKEELLARRTAAAHDKARLEEELAALRRQTAEKAKIVXXXXXXXXXXXXXIADRNRQQAEIRHEGSLLKRTANDLKDRLAALALGMEEARIDRDRLMAQV 744
            G YSFP LK   I  CL+++++P+TEE + + E  A  V+RV E  +E+  GVTRE L QP F GL+ L++ ELH ESIPEL+FFRA  +++    V DF L+DLL P+  R+RR LSA+INF KFREER+  +  L  R + LL R+TA     A L+ EL AL +Q   +A       XXXXXXXXXI   N++QA +RHE   LK      +D +A+    + EA  + +RL  Q+
Sbjct:   10 GVYSFPLLKPRDIFACLREMRVPVTEEEVRSCE--AAAVRRVLEAFLESAMGVTREELQQPAFTGLSALSFPELHAESIPELSFFRASQRLLAACGVADFGLQDLLAPSPKRVRRQLSALINFAKFREERLAAFGELTGRTDALLQRKTALQEQNAALQRELDALLQQQQTEAPAKRQLEXXXXXXXXXINGLNQRQAVLRHEAKTLKEARQGREDDVASARFNVLEAAKEIERLDGQI 246          
BLAST of mRNA_P-wetherbeei_contig5201.2.1 vs. uniprot
Match: A0A5D6Y8F7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8F7_9STRA)

HSP 1 Score: 158 bits (399), Expect = 7.200e-42
Identity = 95/243 (39.09%), Postives = 140/243 (57.61%), Query Frame = 1
Query:   16 SGAVGGYSFPTLKGNRILECLQDLQIPMTEECLINPENHADGVQRVFERLVEATTGVTREGLGQPVFAGLNVLNYAELHDESIPELAFFRACNKMMEMSCVFDFRLKDLLHPNKNRLRRHLSAVINFCKFREERMMVYTALVARKEELLARRTAAAHDKARLEEELAALRRQTAEKAKIVXXXXXXXXXXXXXIADRNRQQAEIRHEGSLLKRTANDLKDRLAALALGMEEARIDRDRLMAQV 744
            +G    YSFP LK + I  C++++QIP+ E+ +   E  A  +++V E  +E+  G TRE L QP FAGL  L Y ELH+ESIPELAFFRA  +++    V+DF LKD+  P   R+RR LSA+INF KFREER+  +  L    ++LL R++A      +L+ +LA L R+   +A  +             I   N++QA +RHE   LK    DL+D +A+    + EA  + +RL  ++
Sbjct:   26 AGGAQVYSFPLLKPSEIFACIREMQIPVAEDEIRACEPVA--IRKVLEVFIESIAGATREELNQPAFAGLGALTYPELHEESIPELAFFRAAARLLSACGVYDFGLKDVQTPTPKRVRRQLSALINFAKFREERLAAFGELTRDTDQLLKRKSALQDTNEQLQRQLAELLREGEVEAPAIRQVSAETAALEAEINVLNKRQAVMRHETGELKTKNADLRDEMASYQFHILEAEKEFERLRGKI 266          
BLAST of mRNA_P-wetherbeei_contig5201.2.1 vs. uniprot
Match: A0A3R7JXM2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JXM2_9STRA)

HSP 1 Score: 152 bits (383), Expect = 1.110e-39
Identity = 93/257 (36.19%), Postives = 144/257 (56.03%), Query Frame = 1
Query:   10 ADSGAVGGYSFPTLKGNRILECLQDLQIPMTEECLINPENHADGVQRVFERLVEATTGVTREGLGQPVFAGLNVLNYAELHDESIPELAFFRACNKMMEMSCVFDFRLKDLLHPNKNRLRRHLSAVINFCKFREERMMVYTALVARKEELLARRTAAAHDKARLEEELAAL--RRQTAEKAKIVXXXXXXXXXXXXXIADRNRQQAEIRHEGSLLKRTANDLKDRLAALALGMEEARIDRDRLMAQVC---GRVAGE 765
            A++   G YSFP LK   I  CL+++++P+ EE +   +  A  +++V E  +E+T GVTRE + Q  F GL  L++ ELH ES+PEL F+R   +++    V DF L+D+LHP   R+RR LSA+INF KFREER++V++ +  + +ELL ++ A   + A LE EL  +   ++  E A++              +   N+QQA +RHE + LK     ++D + +      EA     RL  Q+     RV GE
Sbjct:    6 ANAAPTGVYSFPLLKPREIFACLREMRVPVAEEEIRACDVGA--IRKVLEAFIESTMGVTREDMAQIAFPGLPTLSFPELHSESVPELTFYRTAQRLLAACGVDDFGLRDVLHPTPKRVRRQLSALINFAKFREERLVVFSEITTQTDELLTKKKALQEENAALERELEQMLEEQKLEEPARLELQKEVDVLERDINVL--NKQQAVMRHETAELKEKRKQVEDAVTSARFNKIEAEAKIKRLQGQIVTSPNRVKGE 258          
BLAST of mRNA_P-wetherbeei_contig5201.2.1 vs. uniprot
Match: A0A7S3H4W9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4W9_9STRA)

HSP 1 Score: 152 bits (383), Expect = 2.630e-39
Identity = 89/237 (37.55%), Postives = 129/237 (54.43%), Query Frame = 1
Query:   34 YSFPTLKGNRILECLQDLQIPMTEECLINPENHADGVQRVFERLVEATTGVTREGLGQPVFAGLNVLNYAELHDESIPELAFFRACNKMMEMSCVFDFRLKDLLHPNKNRLRRHLSAVINFCKFREERMMVYTALVARKEELLARRTAAAHDKARLEEELAALRRQTAEKAKIVXXXXXXXXXXXXXIADRNRQQAEIRHEGSLLKRTANDLKDRLAALALGMEEARIDRDRLMAQV 744
            YSFP LK + I++C+ +L IP+ +E + +PENH +  +R+ E L E  TGV++E L QP F GL  + + ELHDESIP+   FRAC KMME+  + DF L+D ++P  NRLRR LS VINF KFREER+++   L  ++E L+ + +                  QTAE+  I+             I++ N+QQ  ++ E S            LAA     EE    +  L +Q+
Sbjct:   29 YSFPLLKSDEIVKCINELGIPIRQEEIQDPENHKEPCRRLLESLAEICTGVSKEELAQPTFVGLQSVPHPELHDESIPKFNHFRACCKMMELCEISDFSLRDFMNPTANRLRRQLSGVINFAKFREERLVLLAELSTKREGLVDQLSXXXXXXXXXXXXXXXXXXQTAEETSIITGLENECRDIEVNISNLNQQQVRLKEETSXXXXXXXXXXXXLAAKYQLQEELTAQKKALSSQI 265          
BLAST of mRNA_P-wetherbeei_contig5201.2.1 vs. uniprot
Match: A0A6G7NUH2_SACJA (Nuf2p n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A6G7NUH2_SACJA)

HSP 1 Score: 149 bits (377), Expect = 8.990e-39
Identity = 103/244 (42.21%), Postives = 146/244 (59.84%), Query Frame = 1
Query:   13 DSGAVGGYSFPTLKGNRILECLQDLQIPMTEECLINPENHADGVQRVFERLVEATTGVTREGLGQPVFAGLNVLNYAELHDESIPELAFFRACNKMMEMSCVFDFRLKDLLHPNKNRLRRHLSAVINFCKFREERMMVYTALVARKEELLARRTAAAHDKARLEEELAALRRQTAEKAKIVXXXXXXXXXXXXXIADRNRQQAEIRHEGSLLKRTANDLKDRLAALALGMEEARIDRDRLMAQV 744
            D G VG YSFP L   +I+  L D+ I + EE L +P+ HA  V  VFE+LVE T GVT+E + QP FAGL  L+  ELHD++I  LA FR   KMM++S + DF LKD+  P + RLRR LSA INF +FREE+ ++Y   +ARK+ + A   A+     +L ++L  ++ + AEK K +   XXXXXXXXXX                 LK+     KD++A+    +++A ++++RL  QV
Sbjct:    3 DGGDVG-YSFPVLNSKQIVGYLSDVHIHVAEEVLSDPKQHASQVVMVFEKLVETTMGVTKEEMSQPAFAGLGCLSNPELHDDNITFLALFRNVCKMMKISKIDDFALKDMSDPTRPRLRRQLSAAINFVRFREEKDVMYQEWLARKKSVAAASKASKLRNIKLADDLDDVQSRMAEKKKAIEDIXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKANFAAKDKVASSMAALKQAEVEKERLQGQV 245          
BLAST of mRNA_P-wetherbeei_contig5201.2.1 vs. uniprot
Match: K3X7R5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7R5_GLOUD)

HSP 1 Score: 145 bits (365), Expect = 5.370e-37
Identity = 83/237 (35.02%), Postives = 133/237 (56.12%), Query Frame = 1
Query:   34 YSFPTLKGNRILECLQDLQIPMTEECLINPENHADGVQRVFERLVEATTGVTREGLGQPVFAGLNVLNYAELHDESIPELAFFRACNKMMEMSCVFDFRLKDLLHPNKNRLRRHLSAVINFCKFREERMMVYTALVARKEELLARRTAAAHDKARLEEELAALRRQTAEKAKIVXXXXXXXXXXXXXIADRNRQQAEIRHEGSLLKRTANDLKDRLAALALGMEEARIDRDRLMAQV 744
            YSFP LK + I  C++++QIP+ E+ + N +  A  +++V E  +E   GVTRE + QP FAGL+ L+Y ELH++S+PELAFFR   K++    V+DF LKD++ P   R+RR LSA+INF KFREER+  ++ L    + L+ ++     +   L+ +L  L ++   +A  +             I   N++QA +RHE S          D + +    + EA  + +RL  ++
Sbjct:   25 YSFPLLKPSEIFACVREMQIPVGEDEIRNCD--AGAIRKVLEVFIENIMGVTREEMNQPAFAGLSALSYPELHEDSVPELAFFRTAAKLLTACGVYDFGLKDIITPTPKRVRRQLSALINFAKFREERLAAFSELTRETDHLIKKKMGLQEENELLQRQLNELLQEHEAEAPAIKQITDETAQLEAEINVLNKRQAVMRHETSEXXXXXXXXXDEMTSYQFNILEAEKEIERLRGKI 259          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5201.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZCC3_9STRA8.280e-7356.43Nuf2 family-domain-containing protein n=1 Tax=Trib... [more]
W7TPN5_9STRA2.770e-5541.49Kinetochore protein Nuf2 n=1 Tax=Nannochloropsis g... [more]
A0A4D9D8Z4_9STRA1.220e-5241.49Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7R9U8B6_9STRA1.130e-4942.21Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A662XCM7_9STRA1.390e-4345.61Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A5D6Y8F7_9STRA7.200e-4239.09Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A3R7JXM2_9STRA1.110e-3936.19Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A7S3H4W9_9STRA2.630e-3937.55Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A6G7NUH2_SACJA8.990e-3942.21Nuf2p n=1 Tax=Saccharina japonica TaxID=88149 RepI... [more]
K3X7R5_GLOUD5.370e-3735.02Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5201contigP-wetherbeei_contig5201:2376..3788 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog115417.EPrPW00000014164
PFAMsNuf2,WD40
Model size768
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons4
Evalue8.47e-43
EggNOG OGsCOG2319@1|root,KOG4438@1|root,KOG2106@2759|Eukaryota,KOG4438@2759|Eukaryota,1MA7N@121069|Pythiales
DescriptionProtein 3.4F-V. Source PGD
Cds size768
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186780.3769896-CDS-P-wetherbeei_contig5201:2375..24831683186780.3769896-CDS-P-wetherbeei_contig5201:2375..2483Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5201 2376..2483 +
1683186780.3865469-CDS-P-wetherbeei_contig5201:2608..28621683186780.3865469-CDS-P-wetherbeei_contig5201:2608..2862Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5201 2609..2862 +
1683186780.3947265-CDS-P-wetherbeei_contig5201:3102..32891683186780.3947265-CDS-P-wetherbeei_contig5201:3102..3289Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5201 3103..3289 +
1683186780.4026425-CDS-P-wetherbeei_contig5201:3569..37881683186780.4026425-CDS-P-wetherbeei_contig5201:3569..3788Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5201 3570..3788 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5201.2.1prot_P-wetherbeei_contig5201.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5201 2376..3788 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5201.2.1

>prot_P-wetherbeei_contig5201.2.1 ID=prot_P-wetherbeei_contig5201.2.1|Name=mRNA_P-wetherbeei_contig5201.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=256bp
MNAADSGAVGGYSFPTLKGNRILECLQDLQIPMTEECLINPENHADGVQR
VFERLVEATTGVTREGLGQPVFAGLNVLNYAELHDESIPELAFFRACNKM
MEMSCVFDFRLKDLLHPNKNRLRRHLSAVINFCKFREERMMVYTALVARK
EELLARRTAAAHDKARLEEELAALRRQTAEKAKIVEQEEAECRRVEAEIA
DRNRQQAEIRHEGSLLKRTANDLKDRLAALALGMEEARIDRDRLMAQVCG
RVAGE*
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mRNA from alignment at P-wetherbeei_contig5201:2376..3788+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5201.2.1 ID=mRNA_P-wetherbeei_contig5201.2.1|Name=mRNA_P-wetherbeei_contig5201.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1413bp|location=Sequence derived from alignment at P-wetherbeei_contig5201:2376..3788+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAACGCCGCAGACTCCGGCGCGGTGGGAGGCTATTCCTTCCCGACGCT CAAGGGCAACCGGATATTGGAATGCCTGCAAGATCTGCAAATACCAATGA CCGAGGAGGTGTGAGCAGCATTCGAGTTCAGCCCTTCTTCCACGAAAAAT CCGCCAGACGGGAGAGAAACTCCTCTCTTCCGAAATTTCTCGTCACGGCG CTCACCTCTCACCGCATATCTCCCTCCCCGCAGTGCCTCATCAATCCGGA GAACCACGCCGACGGCGTGCAGCGCGTCTTCGAGCGGCTCGTCGAGGCGA CGACTGGCGTCACCCGGGAGGGCCTCGGCCAGCCCGTCTTTGCTGGCCTC AACGTGTTAAACTACGCCGAGCTGCACGACGAGAGCATCCCGGAGCTGGC TTTTTTTCGGGCGTGCAACAAAATGATGGAGATGTCGTGCGTCTTCGACT TTCGCCTCAAGGACCTCCTCCACCCAAACAAAAACAGGTCGGTCCCTCGG TTGGTGCATCCTGCATTTCGTTCAAATCAATACGGAGAAAGAAACATGTC TGTGGCTGGTTTGAATGTCTGTCGCCTATTTAATCCTTCGGCTTGTGTGC TAAAAAGACGAAGCCCTGCGGTGAACTCGTTTCTTGGCAAAGCCCGCCTC CACAAAACGACAACGAATCGAATTCAAACCTTCCCTCAAAACCCCCAAAC CCAACAAATGGACGAACGAGCGGGCAGGCTGCGGCGGCACCTGTCGGCAG TGATCAACTTCTGCAAGTTCCGGGAGGAACGCATGATGGTCTATACGGCG CTTGTGGCCCGCAAAGAGGAGCTGCTGGCACGGCGGACGGCGGCGGCGCA CGACAAAGCCCGCCTCGAGGAGGAGCTCGCCGCGCTGCGCCGCCAGACCG CCGAGAAAGCCAAGGTGACGAATTGTTTTGGTTCGGAGTGGGCGGGGTCG GCCTCGTTATTGGCTGACACGCTGTGTGCTTCTCATGCAGTTCTTCGAGA CAGTTGCGGCCTTTGCTTGACGCTGAAACGCCGCTAGCGGACTTGGTGCT GCAACCCCGGGGGCTGCAGGAGCTGCGGGCCGGTTCTTTGGCTGGAGAAG CGTCGCTCGAGGTGTCCTGTTCCATCATGTGCCTCATTTCTCTCTACGTA CTCTCGATTCCCCCTTCCTGGAATCTTCCTGCCCGCCCGAGCAGATTGTG GAGCAGGAAGAGGCCGAGTGCCGGCGCGTCGAGGCGGAAATCGCCGACCG CAATCGGCAGCAGGCCGAGATCCGCCACGAGGGCTCTCTCCTGAAGCGAA CCGCCAACGACCTTAAGGACCGCCTGGCGGCGCTCGCGCTCGGCATGGAG GAGGCGCGCATTGACCGCGACCGCCTCATGGCGCAAGTGTGTGGTAGAGT CGCGGGAGAGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5201:2376..3788+

>mRNA_P-wetherbeei_contig5201.2.1 ID=mRNA_P-wetherbeei_contig5201.2.1|Name=mRNA_P-wetherbeei_contig5201.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=768bp|location=Sequence derived from alignment at P-wetherbeei_contig5201:2376..3788+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAACGCCGCAGACTCCGGCGCGGTGGGAGGCTATTCCTTCCCGACGCT
CAAGGGCAACCGGATATTGGAATGCCTGCAAGATCTGCAAATACCAATGA
CCGAGGAGTGCCTCATCAATCCGGAGAACCACGCCGACGGCGTGCAGCGC
GTCTTCGAGCGGCTCGTCGAGGCGACGACTGGCGTCACCCGGGAGGGCCT
CGGCCAGCCCGTCTTTGCTGGCCTCAACGTGTTAAACTACGCCGAGCTGC
ACGACGAGAGCATCCCGGAGCTGGCTTTTTTTCGGGCGTGCAACAAAATG
ATGGAGATGTCGTGCGTCTTCGACTTTCGCCTCAAGGACCTCCTCCACCC
AAACAAAAACAGGCTGCGGCGGCACCTGTCGGCAGTGATCAACTTCTGCA
AGTTCCGGGAGGAACGCATGATGGTCTATACGGCGCTTGTGGCCCGCAAA
GAGGAGCTGCTGGCACGGCGGACGGCGGCGGCGCACGACAAAGCCCGCCT
CGAGGAGGAGCTCGCCGCGCTGCGCCGCCAGACCGCCGAGAAAGCCAAGA
TTGTGGAGCAGGAAGAGGCCGAGTGCCGGCGCGTCGAGGCGGAAATCGCC
GACCGCAATCGGCAGCAGGCCGAGATCCGCCACGAGGGCTCTCTCCTGAA
GCGAACCGCCAACGACCTTAAGGACCGCCTGGCGGCGCTCGCGCTCGGCA
TGGAGGAGGCGCGCATTGACCGCGACCGCCTCATGGCGCAAGTGTGTGGT
AGAGTCGCGGGAGAGTGA
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