mRNA_P-wetherbeei_contig5201.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5201.2.1 vs. uniprot
Match: A0A835ZCC3_9STRA (Nuf2 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCC3_9STRA) HSP 1 Score: 238 bits (608), Expect = 8.280e-73 Identity = 136/241 (56.43%), Postives = 160/241 (66.39%), Query Frame = 1
Query: 22 AVGGYSFPTLKGNRILECLQDLQIPMTEECLINPENHADGVQRVFERLVEATTGVTREGLGQPVFAGLNVLNYAELHDESIPELAFFRACNKMMEMSCVFDFRLKDLLHPNKNRLRRHLSAVINFCKFREERMMVYTALVARKEELLARRTAAAHDKARLEEELAALRRQTAEKAKIVXXXXXXXXXXXXXIADRNRQQAEIRHEGSLLKRTANDLKDRLAALALGMEEARIDRDRLMAQV 744
A G YSFPTLK ILE LQ LQIP +EE L NP+ + VQ VF +LVE T GVTRE + QPVFAGLNVLNYA+LH++S+PELAFFRA +KMM SCV DF DL PNK RL+R LSAVINFC FRE RM VY AL KE LLA A D RLE ELA+L +T+++A I+ NR+QA R + LKR AN LKDRLAAL L +EA ++R+RL AQ+
Sbjct: 14 AAGVYSFPTLKAKLILERLQQLQIPTSEETLDNPQKNVQEVQNVFAKLVEFTMGVTREEMNQPVFAGLNVLNYAQLHEDSVPELAFFRAVSKMMTASCVHDFSFNDLQTPNKTRLKRQLSAVINFCMFREGRMQVYNALATEKENLLANVQALGEDNERLERELASLTERTSQEAAETEMVEADCRAMEAQISALNREQAATRAQSGDLKRQANGLKDRLAALDLETKEAIMERERLQAQI 254
BLAST of mRNA_P-wetherbeei_contig5201.2.1 vs. uniprot
Match: W7TPN5_9STRA (Kinetochore protein Nuf2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPN5_9STRA) HSP 1 Score: 194 bits (493), Expect = 2.770e-55 Identity = 100/241 (41.49%), Postives = 152/241 (63.07%), Query Frame = 1
Query: 22 AVGGYSFPTLKGNRILECLQDLQIPMTEECLINPENHADGVQRVFERLVEATTGVTREGLGQPVFAGLNVLNYAELHDESIPELAFFRACNKMMEMSCVFDFRLKDLLHPNKNRLRRHLSAVINFCKFREERMMVYTALVARKEELLARRTAAAHDKARLEEELAALRRQTAEKAKIVXXXXXXXXXXXXXIADRNRQQAEIRHEGSLLKRTANDLKDRLAALALGMEEARIDRDRLMAQV 744
+V +SFP LK IL+C+ +LQ+ +TE + + H D ++R +E LVE TG+T+E + QP F+G+N LNY ELH+ESIPELAFFRAC KMM + V DF +KDLL P R+RRHLSA+INF KFREER+++Y+ L +++ELL ++ + +EL LR Q A +++ + + N++QAEIR +G+ LK+ + DLK+ + + +E +R++ Q+
Sbjct: 34 SVQAFSFPILKTPDILQCMHELQVRLTEAEINEADKHRDAIRRAYEYLVEICTGITKEEMSQPAFSGINALNYPELHEESIPELAFFRACTKMMTVCGVHDFSMKDLLSPEPKRVRRHLSAIINFAKFREERLVMYSELAVKRDELLDNLKRLQDEEVGVAKELGVLREQAAAESEEMEGLEQACEVAEAELEQLNKRQAEIRAQGAELKKQSQDLKESIGKASSALESGIEEREKTRGQI 274
BLAST of mRNA_P-wetherbeei_contig5201.2.1 vs. uniprot
Match: A0A4D9D8Z4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8Z4_9STRA) HSP 1 Score: 193 bits (491), Expect = 1.220e-52 Identity = 100/241 (41.49%), Postives = 151/241 (62.66%), Query Frame = 1
Query: 22 AVGGYSFPTLKGNRILECLQDLQIPMTEECLINPENHADGVQRVFERLVEATTGVTREGLGQPVFAGLNVLNYAELHDESIPELAFFRACNKMMEMSCVFDFRLKDLLHPNKNRLRRHLSAVINFCKFREERMMVYTALVARKEELLARRTAAAHDKARLEEELAALRRQTAEKAKIVXXXXXXXXXXXXXIADRNRQQAEIRHEGSLLKRTANDLKDRLAALALGMEEARIDRDRLMAQV 744
+V +SFP LK IL+C+ +LQ+ +TE + + H D ++R +E LVE TG+T+E + QP F+G+N LNY ELH+ESIPELAFFRAC KMM + V DF +KDLL P R+RRHLSA+INF KFREER+++Y+ L +++ELL ++ + +EL LR Q A + + + + N++QAEIR +G+ LK+ + DLK+ + + +E +R++ Q+
Sbjct: 688 SVQAFSFPILKTPDILQCMHELQVRLTEAEINEADKHRDAIRRAYEYLVEICTGITKEEMSQPAFSGINALNYPELHEESIPELAFFRACTKMMTVCGVHDFSMKDLLSPEPKRVRRHLSAIINFAKFREERLVMYSELAVKRDELLDNLKRLQDEEVGVAKELGVLREQAAAEREEMEGLEQACEVAEAELEQLNKRQAEIRAQGAELKKQSQDLKESIGKASSALESGIEEREKTRGQI 928
BLAST of mRNA_P-wetherbeei_contig5201.2.1 vs. uniprot
Match: A0A7R9U8B6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8B6_9STRA) HSP 1 Score: 174 bits (442), Expect = 1.130e-49 Identity = 103/244 (42.21%), Postives = 136/244 (55.74%), Query Frame = 1
Query: 34 YSFPTLKGNRILECLQDLQIPMTEECLINPENHADGVQRVFERLVEATTGVTREGLGQPVFAGLNVLNYAELHDESIPELAFFRACNKMMEMSCVFDFRLKDLLHPNKNRLRRHLSAVINFCKFREERMMVYTALVARKEELLARRTAAAHDKARLEEELAALRRQTAEKAKIVXXXXXXXXXXXXXIADRNRQQAEIRHEGSLLKRTANDLKDRLAALALGMEEARIDRDRLMAQVCGRVAGE 765
+SFP L + C+ DLQI + EE L P H D V+R FE +E T VTRE L QP F+GL LNY ELH+ESIP LAFFRA K+M V DF + D+L P+ RLR+ LSA INF KFREER++++T L + + AA +KA L+ EL L+ TAE+ + I NR+QA ++ E K+ + K+ LA L +E DR+RL +QV A E
Sbjct: 6 FSFPILSARELCLCMTDLQISLPEEALAEPSKHKDAVRRCFEAFIELCTDVTREELNQPAFSGLEALNYPELHEESIPALAFFRAVGKLMHTCGVSDFTIGDVLSPSPKRLRKCLSAAINFAKFREERLLLFTELTEERASTMETLAAAQQEKAALQAELDRLKELTAEEDAEIHAERSACESLAEEIEVLNREQARLKGESREKKQLTTNRKEVLAKLVSQLENLAEDRERLRSQVVRSPARE 249
BLAST of mRNA_P-wetherbeei_contig5201.2.1 vs. uniprot
Match: A0A662XCM7_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCM7_9STRA) HSP 1 Score: 162 bits (411), Expect = 1.390e-43 Identity = 109/239 (45.61%), Postives = 148/239 (61.92%), Query Frame = 1
Query: 28 GGYSFPTLKGNRILECLQDLQIPMTEECLINPENHADGVQRVFERLVEATTGVTREGLGQPVFAGLNVLNYAELHDESIPELAFFRACNKMMEMSCVFDFRLKDLLHPNKNRLRRHLSAVINFCKFREERMMVYTALVARKEELLARRTAAAHDKARLEEELAALRRQTAEKAKIVXXXXXXXXXXXXXIADRNRQQAEIRHEGSLLKRTANDLKDRLAALALGMEEARIDRDRLMAQV 744
G YSFP LK I CL+++++P+TEE + + E A V+RV E +E+ GVTRE L QP F GL+ L++ ELH ESIPEL+FFRA +++ V DF L+DLL P+ R+RR LSA+INF KFREER+ + L R + LL R+TA A L+ EL AL +Q +A XXXXXXXXXI N++QA +RHE LK +D +A+ + EA + +RL Q+
Sbjct: 10 GVYSFPLLKPRDIFACLREMRVPVTEEEVRSCE--AAAVRRVLEAFLESAMGVTREELQQPAFTGLSALSFPELHAESIPELSFFRASQRLLAACGVADFGLQDLLAPSPKRVRRQLSALINFAKFREERLAAFGELTGRTDALLQRKTALQEQNAALQRELDALLQQQQTEAPAKRQLEXXXXXXXXXINGLNQRQAVLRHEAKTLKEARQGREDDVASARFNVLEAAKEIERLDGQI 246
BLAST of mRNA_P-wetherbeei_contig5201.2.1 vs. uniprot
Match: A0A5D6Y8F7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8F7_9STRA) HSP 1 Score: 158 bits (399), Expect = 7.200e-42 Identity = 95/243 (39.09%), Postives = 140/243 (57.61%), Query Frame = 1
Query: 16 SGAVGGYSFPTLKGNRILECLQDLQIPMTEECLINPENHADGVQRVFERLVEATTGVTREGLGQPVFAGLNVLNYAELHDESIPELAFFRACNKMMEMSCVFDFRLKDLLHPNKNRLRRHLSAVINFCKFREERMMVYTALVARKEELLARRTAAAHDKARLEEELAALRRQTAEKAKIVXXXXXXXXXXXXXIADRNRQQAEIRHEGSLLKRTANDLKDRLAALALGMEEARIDRDRLMAQV 744
+G YSFP LK + I C++++QIP+ E+ + E A +++V E +E+ G TRE L QP FAGL L Y ELH+ESIPELAFFRA +++ V+DF LKD+ P R+RR LSA+INF KFREER+ + L ++LL R++A +L+ +LA L R+ +A + I N++QA +RHE LK DL+D +A+ + EA + +RL ++
Sbjct: 26 AGGAQVYSFPLLKPSEIFACIREMQIPVAEDEIRACEPVA--IRKVLEVFIESIAGATREELNQPAFAGLGALTYPELHEESIPELAFFRAAARLLSACGVYDFGLKDVQTPTPKRVRRQLSALINFAKFREERLAAFGELTRDTDQLLKRKSALQDTNEQLQRQLAELLREGEVEAPAIRQVSAETAALEAEINVLNKRQAVMRHETGELKTKNADLRDEMASYQFHILEAEKEFERLRGKI 266
BLAST of mRNA_P-wetherbeei_contig5201.2.1 vs. uniprot
Match: A0A3R7JXM2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JXM2_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.110e-39 Identity = 93/257 (36.19%), Postives = 144/257 (56.03%), Query Frame = 1
Query: 10 ADSGAVGGYSFPTLKGNRILECLQDLQIPMTEECLINPENHADGVQRVFERLVEATTGVTREGLGQPVFAGLNVLNYAELHDESIPELAFFRACNKMMEMSCVFDFRLKDLLHPNKNRLRRHLSAVINFCKFREERMMVYTALVARKEELLARRTAAAHDKARLEEELAAL--RRQTAEKAKIVXXXXXXXXXXXXXIADRNRQQAEIRHEGSLLKRTANDLKDRLAALALGMEEARIDRDRLMAQVC---GRVAGE 765
A++ G YSFP LK I CL+++++P+ EE + + A +++V E +E+T GVTRE + Q F GL L++ ELH ES+PEL F+R +++ V DF L+D+LHP R+RR LSA+INF KFREER++V++ + + +ELL ++ A + A LE EL + ++ E A++ + N+QQA +RHE + LK ++D + + EA RL Q+ RV GE
Sbjct: 6 ANAAPTGVYSFPLLKPREIFACLREMRVPVAEEEIRACDVGA--IRKVLEAFIESTMGVTREDMAQIAFPGLPTLSFPELHSESVPELTFYRTAQRLLAACGVDDFGLRDVLHPTPKRVRRQLSALINFAKFREERLVVFSEITTQTDELLTKKKALQEENAALERELEQMLEEQKLEEPARLELQKEVDVLERDINVL--NKQQAVMRHETAELKEKRKQVEDAVTSARFNKIEAEAKIKRLQGQIVTSPNRVKGE 258
BLAST of mRNA_P-wetherbeei_contig5201.2.1 vs. uniprot
Match: A0A7S3H4W9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4W9_9STRA) HSP 1 Score: 152 bits (383), Expect = 2.630e-39 Identity = 89/237 (37.55%), Postives = 129/237 (54.43%), Query Frame = 1
Query: 34 YSFPTLKGNRILECLQDLQIPMTEECLINPENHADGVQRVFERLVEATTGVTREGLGQPVFAGLNVLNYAELHDESIPELAFFRACNKMMEMSCVFDFRLKDLLHPNKNRLRRHLSAVINFCKFREERMMVYTALVARKEELLARRTAAAHDKARLEEELAALRRQTAEKAKIVXXXXXXXXXXXXXIADRNRQQAEIRHEGSLLKRTANDLKDRLAALALGMEEARIDRDRLMAQV 744
YSFP LK + I++C+ +L IP+ +E + +PENH + +R+ E L E TGV++E L QP F GL + + ELHDESIP+ FRAC KMME+ + DF L+D ++P NRLRR LS VINF KFREER+++ L ++E L+ + + QTAE+ I+ I++ N+QQ ++ E S LAA EE + L +Q+
Sbjct: 29 YSFPLLKSDEIVKCINELGIPIRQEEIQDPENHKEPCRRLLESLAEICTGVSKEELAQPTFVGLQSVPHPELHDESIPKFNHFRACCKMMELCEISDFSLRDFMNPTANRLRRQLSGVINFAKFREERLVLLAELSTKREGLVDQLSXXXXXXXXXXXXXXXXXXQTAEETSIITGLENECRDIEVNISNLNQQQVRLKEETSXXXXXXXXXXXXLAAKYQLQEELTAQKKALSSQI 265
BLAST of mRNA_P-wetherbeei_contig5201.2.1 vs. uniprot
Match: A0A6G7NUH2_SACJA (Nuf2p n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A6G7NUH2_SACJA) HSP 1 Score: 149 bits (377), Expect = 8.990e-39 Identity = 103/244 (42.21%), Postives = 146/244 (59.84%), Query Frame = 1
Query: 13 DSGAVGGYSFPTLKGNRILECLQDLQIPMTEECLINPENHADGVQRVFERLVEATTGVTREGLGQPVFAGLNVLNYAELHDESIPELAFFRACNKMMEMSCVFDFRLKDLLHPNKNRLRRHLSAVINFCKFREERMMVYTALVARKEELLARRTAAAHDKARLEEELAALRRQTAEKAKIVXXXXXXXXXXXXXIADRNRQQAEIRHEGSLLKRTANDLKDRLAALALGMEEARIDRDRLMAQV 744
D G VG YSFP L +I+ L D+ I + EE L +P+ HA V VFE+LVE T GVT+E + QP FAGL L+ ELHD++I LA FR KMM++S + DF LKD+ P + RLRR LSA INF +FREE+ ++Y +ARK+ + A A+ +L ++L ++ + AEK K + XXXXXXXXXX LK+ KD++A+ +++A ++++RL QV
Sbjct: 3 DGGDVG-YSFPVLNSKQIVGYLSDVHIHVAEEVLSDPKQHASQVVMVFEKLVETTMGVTKEEMSQPAFAGLGCLSNPELHDDNITFLALFRNVCKMMKISKIDDFALKDMSDPTRPRLRRQLSAAINFVRFREEKDVMYQEWLARKKSVAAASKASKLRNIKLADDLDDVQSRMAEKKKAIEDIXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKANFAAKDKVASSMAALKQAEVEKERLQGQV 245
BLAST of mRNA_P-wetherbeei_contig5201.2.1 vs. uniprot
Match: K3X7R5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7R5_GLOUD) HSP 1 Score: 145 bits (365), Expect = 5.370e-37 Identity = 83/237 (35.02%), Postives = 133/237 (56.12%), Query Frame = 1
Query: 34 YSFPTLKGNRILECLQDLQIPMTEECLINPENHADGVQRVFERLVEATTGVTREGLGQPVFAGLNVLNYAELHDESIPELAFFRACNKMMEMSCVFDFRLKDLLHPNKNRLRRHLSAVINFCKFREERMMVYTALVARKEELLARRTAAAHDKARLEEELAALRRQTAEKAKIVXXXXXXXXXXXXXIADRNRQQAEIRHEGSLLKRTANDLKDRLAALALGMEEARIDRDRLMAQV 744
YSFP LK + I C++++QIP+ E+ + N + A +++V E +E GVTRE + QP FAGL+ L+Y ELH++S+PELAFFR K++ V+DF LKD++ P R+RR LSA+INF KFREER+ ++ L + L+ ++ + L+ +L L ++ +A + I N++QA +RHE S D + + + EA + +RL ++
Sbjct: 25 YSFPLLKPSEIFACVREMQIPVGEDEIRNCD--AGAIRKVLEVFIENIMGVTREEMNQPAFAGLSALSYPELHEDSVPELAFFRTAAKLLTACGVYDFGLKDIITPTPKRVRRQLSALINFAKFREERLAAFSELTRETDHLIKKKMGLQEENELLQRQLNELLQEHEAEAPAIKQITDETAQLEAEINVLNKRQAVMRHETSEXXXXXXXXXDEMTSYQFNILEAEKEIERLRGKI 259 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5201.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5201.2.1 >prot_P-wetherbeei_contig5201.2.1 ID=prot_P-wetherbeei_contig5201.2.1|Name=mRNA_P-wetherbeei_contig5201.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=256bp MNAADSGAVGGYSFPTLKGNRILECLQDLQIPMTEECLINPENHADGVQRback to top mRNA from alignment at P-wetherbeei_contig5201:2376..3788+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5201.2.1 ID=mRNA_P-wetherbeei_contig5201.2.1|Name=mRNA_P-wetherbeei_contig5201.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1413bp|location=Sequence derived from alignment at P-wetherbeei_contig5201:2376..3788+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5201:2376..3788+ >mRNA_P-wetherbeei_contig5201.2.1 ID=mRNA_P-wetherbeei_contig5201.2.1|Name=mRNA_P-wetherbeei_contig5201.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=768bp|location=Sequence derived from alignment at P-wetherbeei_contig5201:2376..3788+ (Phaeothamnion wetherbeei SAG_119_79)back to top |