mRNA_P-wetherbeei_contig51836.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig51836.1.1
Unique NamemRNA_P-wetherbeei_contig51836.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51836.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig51836contigP-wetherbeei_contig51836:13..327 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1238182.C882_0543
PFAMsLprI
Model size315
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.41e-10
EggNOG OGsCOG3755@1|root,COG3755@2|Bacteria,1PHDX@1224|Proteobacteria,2VC62@28211|Alphaproteobacteria,2JXYJ@204441|Rhodospirillales
DescriptionLysozyme inhibitor LprI
Cds size294
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186777.8774452-CDS-P-wetherbeei_contig51836:12..3061683186777.8774452-CDS-P-wetherbeei_contig51836:12..306Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig51836 13..306 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186777.8886821-UTR-P-wetherbeei_contig51836:306..3271683186777.8886821-UTR-P-wetherbeei_contig51836:306..327Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig51836 307..327 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig51836.1.1prot_P-wetherbeei_contig51836.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig51836 13..306 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig51836.1.1

>prot_P-wetherbeei_contig51836.1.1 ID=prot_P-wetherbeei_contig51836.1.1|Name=mRNA_P-wetherbeei_contig51836.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=98bp
MQAAKADDPGAIHACLTAEIKRQDSRLATATQKVLKVIPPEARKKLETAN
ADWRRYRGSECGFMAEENGPAPANLQNADCRLRMTTLRAADLDNLASM
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mRNA from alignment at P-wetherbeei_contig51836:13..327-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig51836.1.1 ID=mRNA_P-wetherbeei_contig51836.1.1|Name=mRNA_P-wetherbeei_contig51836.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=315bp|location=Sequence derived from alignment at P-wetherbeei_contig51836:13..327- (Phaeothamnion wetherbeei SAG_119_79)
ATCCAGAAGGCGCAGACCGCCATGCAGGCGGCCAAGGCCGATGACCCGGG
CGCGATTCACGCCTGCCTCACGGCAGAAATCAAACGTCAGGACAGTCGCC
TGGCCACTGCCACCCAGAAGGTACTGAAGGTCATACCGCCCGAGGCCCGC
AAAAAGCTCGAAACCGCCAATGCCGACTGGCGCCGCTATCGCGGCAGCGA
ATGCGGATTCATGGCCGAAGAGAACGGCCCGGCCCCCGCGAACCTGCAAA
ACGCCGATTGCCGCCTGCGCATGACCACATTGCGCGCCGCGGACCTCGAC
AACCTGGCCAGCATG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig51836:13..327-

>mRNA_P-wetherbeei_contig51836.1.1 ID=mRNA_P-wetherbeei_contig51836.1.1|Name=mRNA_P-wetherbeei_contig51836.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=294bp|location=Sequence derived from alignment at P-wetherbeei_contig51836:13..327- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGGCGGCCAAGGCCGATGACCCGGGCGCGATTCACGCCTGCCTCAC
GGCAGAAATCAAACGTCAGGACAGTCGCCTGGCCACTGCCACCCAGAAGG
TACTGAAGGTCATACCGCCCGAGGCCCGCAAAAAGCTCGAAACCGCCAAT
GCCGACTGGCGCCGCTATCGCGGCAGCGAATGCGGATTCATGGCCGAAGA
GAACGGCCCGGCCCCCGCGAACCTGCAAAACGCCGATTGCCGCCTGCGCA
TGACCACATTGCGCGCCGCGGACCTCGACAACCTGGCCAGCATG
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