mRNA_P-wetherbeei_contig5177.3.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5177.3.2 vs. uniprot
Match: A0A7V7FMI1_9PROT (Uncharacterized protein n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A7V7FMI1_9PROT) HSP 1 Score: 245 bits (626), Expect = 2.140e-78 Identity = 135/198 (68.18%), Postives = 147/198 (74.24%), Query Frame = 3
Query: 177 MRRCKRSSPFRYK*GPGKSAANRRASAAGSCIPGMRRR-----PSASARARRT-C---------YEFGVKVSLTTTNKRCRGGQFILHARALPGNPYDGHTLREVIGETEALTGREIERVYVDKGYRGHDAPYPNRVFRSGQRCGVHGQIKKELRRRCAIEPVIGHCKTDGHLGRNFLKGRLGDQINAVMSAVGYNLR 725
M R R R+ GP KSA A+AAGS + + R P + A T C YEFGVKVSLTTTNKR +GGQFILH +ALPGNPYDGHTL+EVI ETE LTGREIER YVD+GYRGHDAP P+RVF+SGQ+ GVHGQIKKELRRR AIE VIGHCKTDGHL RNFLKGR GDQINAVMSAVGYNLR
Sbjct: 1 MTRAWRKPSPRHLAGPAKSADRSSANAAGSSLRRLASRHWRDGPPPTWHAPETECIGKGKAHKPYEFGVKVSLTTTNKRRKGGQFILHTKALPGNPYDGHTLKEVIEETETLTGREIERAYVDEGYRGHDAPNPHRVFKSGQKRGVHGQIKKELRRRSAIEAVIGHCKTDGHLDRNFLKGRDGDQINAVMSAVGYNLR 198
BLAST of mRNA_P-wetherbeei_contig5177.3.2 vs. uniprot
Match: A0A7C7NXL3_9BACT (IS5 family transposase n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A7C7NXL3_9BACT) HSP 1 Score: 241 bits (616), Expect = 1.320e-74 Identity = 115/134 (85.82%), Postives = 122/134 (91.04%), Query Frame = 3
Query: 324 YEFGVKVSLTTTNKRCRGGQFILHARALPGNPYDGHTLREVIGETEALTGREIERVYVDKGYRGHDAPYPNRVFRSGQRCGVHGQIKKELRRRCAIEPVIGHCKTDGHLGRNFLKGRLGDQINAVMSAVGYNLR 725
YEFGVKVSLTTTNKRC+GGQFILHA+ALPGNPYDGHTL EV+ ETEALTGREIERVYVDKGY GH AP P RVFRSGQ+ GV+GQIKKELRRR AIEPVIGHCK DGHL RN+LKGR GD+INAVMSAVGYN R
Sbjct: 236 YEFGVKVSLTTTNKRCKGGQFILHAKALPGNPYDGHTLAEVLEETEALTGREIERVYVDKGYVGHKAPRPMRVFRSGQKRGVYGQIKKELRRRSAIEPVIGHCKEDGHLDRNYLKGRHGDRINAVMSAVGYNFR 369
BLAST of mRNA_P-wetherbeei_contig5177.3.2 vs. uniprot
Match: A0A0F9HTL8_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9HTL8_9ZZZZ) HSP 1 Score: 230 bits (586), Expect = 6.150e-70 Identity = 108/125 (86.40%), Postives = 115/125 (92.00%), Query Frame = 3
Query: 324 YEFGVKVSLTTTNKRCRGGQFILHARALPGNPYDGHTLREVIGETEALTGREIERVYVDKGYRGHDAPYPNRVFRSGQRCGVHGQIKKELRRRCAIEPVIGHCKTDGHLGRNFLKGRLGDQINAV 698
YEFGVKVSLTTTNKRC+GGQFILHA+ALPGNPYDGHTL++ I ETEALTGREIER YVDKGYRGHDAP P+RVF+SGQ+ GVHGQIKKELRRR AIE VIGHCKTDGHL RNFLKGR G QINAV
Sbjct: 284 YEFGVKVSLTTTNKRCKGGQFILHAKALPGNPYDGHTLKDAIEETEALTGREIERAYVDKGYRGHDAPKPHRVFKSGQKRGVHGQIKKELRRRSAIEAVIGHCKTDGHLDRNFLKGRDGAQINAV 408
BLAST of mRNA_P-wetherbeei_contig5177.3.2 vs. uniprot
Match: A0A522R8V9_9HYPH (IS5 family transposase n=1 Tax=Rhizobiaceae bacterium TaxID=1913961 RepID=A0A522R8V9_9HYPH) HSP 1 Score: 226 bits (576), Expect = 4.690e-68 Identity = 106/134 (79.10%), Postives = 118/134 (88.06%), Query Frame = 3
Query: 324 YEFGVKVSLTTTNKRCRGGQFILHARALPGNPYDGHTLREVIGETEALTGREIERVYVDKGYRGHDAPYPNRVFRSGQRCGVHGQIKKELRRRCAIEPVIGHCKTDGHLGRNFLKGRLGDQINAVMSAVGYNLR 725
YEFG KVS+TTTN+RC+GGQF+LHA+ALPGNP+DGHTL VI ET+ALTGREIERVYVDKGYRGH A P RVF SGQ+ GVHG IK+ELRRR AIEPVIGH K+DGHLGRN+LKGR GD NAV+SAVGYNLR
Sbjct: 284 YEFGTKVSITTTNRRCKGGQFVLHAKALPGNPFDGHTLAGVIEETQALTGREIERVYVDKGYRGHKARQPLRVFISGQKRGVHGAIKRELRRRSAIEPVIGHMKSDGHLGRNYLKGRHGDHANAVLSAVGYNLR 417
BLAST of mRNA_P-wetherbeei_contig5177.3.2 vs. uniprot
Match: A0A357L4G2_9PROT (IS5/IS1182 family transposase (Fragment) n=3 Tax=Parvularcula sp. TaxID=1979207 RepID=A0A357L4G2_9PROT) HSP 1 Score: 209 bits (533), Expect = 1.040e-64 Identity = 98/136 (72.06%), Postives = 112/136 (82.35%), Query Frame = 3
Query: 318 TCYEFGVKVSLTTTNKRCRGGQFILHARALPGNPYDGHTLREVIGETEALTGREIERVYVDKGYRGHDAPYPNRVFRSGQRCGVHGQIKKELRRRCAIEPVIGHCKTDGHLGRNFLKGRLGDQINAVMSAVGYNLR 725
T +EFGVKVSL TTNKRC+GGQ +LHA+ALPG PYDGHTL++V+ ET ALTGREIER Y DKGYRGHDA P RVF SGQ+ GVHGQIK ELRRR AIEPVIGH K+ G + RNFLKGR GD+ N +++A G NLR
Sbjct: 35 TPWEFGVKVSLVTTNKRCKGGQVVLHAKALPGAPYDGHTLKDVLAETSALTGREIERAYTDKGYRGHDADNPRRVFISGQKRGVHGQIKSELRRRSAIEPVIGHLKSGGSMDRNFLKGRPGDRANPILAATGPNLR 170
BLAST of mRNA_P-wetherbeei_contig5177.3.2 vs. uniprot
Match: Q9AN33_BRAJP (ID593 n=8 Tax=Bradyrhizobium TaxID=374 RepID=Q9AN33_BRAJP) HSP 1 Score: 202 bits (515), Expect = 2.790e-62 Identity = 101/149 (67.79%), Postives = 114/149 (76.51%), Query Frame = 3
Query: 279 MRRRPSASARARRTCYEFGVKVSLTTTNKRCRGGQFILHARALPGNPYDGHTLREVIGETEALTGREIERVYVDKGYRGHDAPYPNRVFRSGQRCGVHGQIKKELRRRCAIEPVIGHCKTDGHLGRNFLKGRLGDQINAVMSAVGYNLR 725
M RR SASARAR YEFGVK S+ T N+R GG F+LHA +LP NPYDGHTLR VI TE+LTG IER YVDKGYRGHD P RVF SGQ+ GV G IK+ELRRR AIEP+IGH K +GHLGR +LKGR GD N ++SAVG+NLR
Sbjct: 1 MLRRSSASARARPPPYEFGVKASIVTNNQRAPGGLFVLHACSLPDNPYDGHTLRNVIERTESLTGCPIERAYVDKGYRGHDTQNPRRVFISGQKRGVFGVIKRELRRRSAIEPIIGHMKNEGHLGRCYLKGRAGDAANVLLSAVGHNLR 149
BLAST of mRNA_P-wetherbeei_contig5177.3.2 vs. uniprot
Match: I2QQ00_9BRAD (Uncharacterized protein (Fragment) n=1 Tax=Bradyrhizobium sp. WSM1253 TaxID=319003 RepID=I2QQ00_9BRAD) HSP 1 Score: 201 bits (512), Expect = 3.230e-61 Identity = 112/195 (57.44%), Postives = 127/195 (65.13%), Query Frame = 3
Query: 174 VMRRCKRSSPFRYK*GPGKSAANRRASAAGS----------CI-PGMRRRPSASARARRTCYEFGVKVSLTTTNKRCRGGQFILHARALPGNPYDGHTLREVIGETEALTGREIERVYVDKGYRGHDAPYPNRVFRSGQRCGVHGQIKKELRRRCAIEPVIGHCKTDGHLGRNFLKGRLGDQINAVMSAVGYNLR 725
R +R SP R GP KSA + A+AAGS CI G P YEFGVK S+ T N+R GG F+LHAR+LP NPYDGHTLR+VI TEALTG IER YVDKGYRGHD P RVF SGQ+ GV G IK+ELRRR AIEP+IGH K +GHLGR +LKGR GD N V+SAVG+N R
Sbjct: 10 ASRHWRRHSPSRLA-GPCKSARSSSANAAGSFYSFHAPEVECIGKGKAAAP----------YEFGVKASIVTNNRRAPGGLFVLHARSLPDNPYDGHTLRDVIDRTEALTGCPIERAYVDKGYRGHDTQNPRRVFISGQKRGVFGAIKRELRRRSAIEPIIGHLKAEGHLGRCYLKGRAGDAANVVLSAVGHNFR 193
BLAST of mRNA_P-wetherbeei_contig5177.3.2 vs. uniprot
Match: UPI001E2FEE2A (IS5 family transposase n=1 Tax=Reyranella aquatilis TaxID=2035356 RepID=UPI001E2FEE2A) HSP 1 Score: 207 bits (526), Expect = 1.320e-60 Identity = 97/137 (70.80%), Postives = 109/137 (79.56%), Query Frame = 3
Query: 315 RTCYEFGVKVSLTTTNKRCRGGQFILHARALPGNPYDGHTLREVIGETEALTGREIERVYVDKGYRGHDAPYPNRVFRSGQRCGVHGQIKKELRRRCAIEPVIGHCKTDGHLGRNFLKGRLGDQINAVMSAVGYNLR 725
R YEFGVKVS+ TTN R GGQF+LHA ALPGNPYDGHTLR VI +T+ LTGREIERVYVDKGYRGHDAP P VF SGQ+ GV G IK+ELRRR A+EP+IGH K GHLGR +LKG GD NA+++A GYN R
Sbjct: 281 RAPYEFGVKVSIVTTNARAPGGQFVLHAAALPGNPYDGHTLRAVIEDTQRLTGREIERVYVDKGYRGHDAPKPRSVFISGQKRGVFGAIKRELRRRSAVEPLIGHMKEQGHLGRCYLKGHAGDAANAILTAAGYNFR 417
BLAST of mRNA_P-wetherbeei_contig5177.3.2 vs. uniprot
Match: A0A259JVL1_9HYPH (IS5/IS1182 family transposase (Fragment) n=1 Tax=Azorhizobium sp. 39-67-5 TaxID=1970322 RepID=A0A259JVL1_9HYPH) HSP 1 Score: 205 bits (521), Expect = 1.770e-60 Identity = 96/137 (70.07%), Postives = 111/137 (81.02%), Query Frame = 3
Query: 315 RTCYEFGVKVSLTTTNKRCRGGQFILHARALPGNPYDGHTLREVIGETEALTGREIERVYVDKGYRGHDAPYPNRVFRSGQRCGVHGQIKKELRRRCAIEPVIGHCKTDGHLGRNFLKGRLGDQINAVMSAVGYNLR 725
R YEFGVKVS+ TTN GGQF+LHA ALPGNPYDGHTLR+V+ +T+ LTGREIERVYVDKGYRGHDAP+P RVF SGQ+ GV G IK+ELRRR A+EP+IGH K +GHLGR +LKGR D NAV++A YN R
Sbjct: 224 RAPYEFGVKVSIVTTNACSPGGQFVLHAVALPGNPYDGHTLRDVVEDTQRLTGREIERVYVDKGYRGHDAPHPRRVFISGQKRGVFGTIKRELRRRSAVEPLIGHLKEEGHLGRCYLKGRASDAANAVLTAAEYNFR 360
BLAST of mRNA_P-wetherbeei_contig5177.3.2 vs. uniprot
Match: A0A7V8SWP2_9BACT (IS5 family transposase n=2 Tax=Bacteria TaxID=2 RepID=A0A7V8SWP2_9BACT) HSP 1 Score: 206 bits (524), Expect = 2.620e-60 Identity = 98/134 (73.13%), Postives = 107/134 (79.85%), Query Frame = 3
Query: 324 YEFGVKVSLTTTNKRCRGGQFILHARALPGNPYDGHTLREVIGETEALTGREIERVYVDKGYRGHDAPYPNRVFRSGQRCGVHGQIKKELRRRCAIEPVIGHCKTDGHLGRNFLKGRLGDQINAVMSAVGYNLR 725
YEFGVK S+ TTN R GGQF+LHAR LPGNPYDGHTL VI TE LTGREIER YVDKGYRGHDAP P RVF SGQ+ GV G+IK+EL RR AIE VIGH K +GHLGR +LKGR GD N ++SAVGYNLR
Sbjct: 284 YEFGVKASVVTTNARAPGGQFVLHARTLPGNPYDGHTLGAVIEATERLTGREIERAYVDKGYRGHDAPNPRRVFISGQKRGVFGRIKRELTRRSAIEAVIGHMKAEGHLGRCYLKGRAGDAANVILSAVGYNLR 417 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5177.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5177.3.2 >prot_P-wetherbeei_contig5177.3.2 ID=prot_P-wetherbeei_contig5177.3.2|Name=mRNA_P-wetherbeei_contig5177.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=121bp MPPETIWAKQFKRMNGRIKFLHTRLGRIIRDIGRKTGCDAALQEVFAVQVback to top mRNA from alignment at P-wetherbeei_contig5177:3124..3941- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5177.3.2 ID=mRNA_P-wetherbeei_contig5177.3.2|Name=mRNA_P-wetherbeei_contig5177.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=818bp|location=Sequence derived from alignment at P-wetherbeei_contig5177:3124..3941- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5177:3124..3941- >mRNA_P-wetherbeei_contig5177.3.2 ID=mRNA_P-wetherbeei_contig5177.3.2|Name=mRNA_P-wetherbeei_contig5177.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=363bp|location=Sequence derived from alignment at P-wetherbeei_contig5177:3124..3941- (Phaeothamnion wetherbeei SAG_119_79)back to top |