mRNA_P-wetherbeei_contig517.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig517.1.2
Unique NamemRNA_P-wetherbeei_contig517.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig517.1.2 vs. uniprot
Match: D8LHU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU3_ECTSI)

HSP 1 Score: 323 bits (827), Expect = 4.250e-85
Identity = 629/1954 (32.19%), Postives = 790/1954 (40.43%), Query Frame = 1
Query:  148 RKDLLVGQTAEVKLGPLVPSPDPDATVGLRPVAQSWLTAVEAHFWCWSEACLYCGSGGAENDMVFCMDCGEAFHGWCVNVPLKTMDARARASWRCLNCKVCEACLTVAAADEGSLVYCEICDRAYHLNCLKPAPHAVPDGAWICGQCFSCERCREPHPFTAWSHSAKACRDCLRDAARRDQQAELQRXXXXXXXXXXXXXXXXXXXXXAEKAVATAASEAXXXXXXXXXXXXXXXXXXXXXXXXAMTLKPEVAAAAEWGVNVPALVGAHRCPSCETKWDETDMRMVECDSCGLWVHAACDPDPPAPTPPAMPDFDFFCEACLGV--RELQATLL----------ATASGVAAPNAA-----DXXXXXXXXXXXXXXXXXXXGNPALEAAALRAPAAIEGFPFPP------------ATGAGGHGREPARKKSRSRDGXXXXXXXXXXXXXXXWEM--ASDSASEFGEGSVAGSSARELAQRVRWIEERRARLQERTEVAAAVAQREEREWQAMEPQRARCVQVIGRALQEVLRLQKTNFEQEGYWKMLQATAKAQTKAPLFLRCRAARFLRMHRFKGGHRMRARVTELMAFGGRGGPGSDRGPLVTRHMSGVVRLATSAAAFLGMLGIELLQQWPDHFTKDMAAQRPVVLAAKPPFEMLEALFGGRGXXXXXXXXNSWGGDSSGGAEDCGXSDGGRGCVSADATGVREGXXXXXXXXKADTGGNAGVTSAAAPTAGSG------------------------AGDSHLRRRDGLAAGGPVA-------------------------VTDPGAMEEDVASSLAAGSGPAAGETATXXXXXXSGGTW---------------------------------------------------------ASGIAVAAVSAGEGPDARARTALSVMDVSRLVPPDSNRPSAXXXXXXXXXDFESGADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGG---FGGRGFGXXXXXXXXXXXXXXDRSGGAPAAAGTVARSPGGGIGMPPTQSAAEASXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGSPLDGPEIPLLVPLRGWESDDAHAVVKQALGPWEDVRKCTFCHDASDSATCGRLLPFDDGQWTHTQCALWSGGVFEDQRVGMCGRLRGLAKARSAGRTARCRLCGLPGATLRCEAQPPGPRGYCDESFHFPCAVEAGCFMANTMTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLAGFPAGSGSAWDSASVTDAGTILSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAFEDSGALS----------RLSSVTVDVRDGKLAA--ATSSSTPGCDGVGAASDGASNIGGSGGTGEADGGALTTARSAMAVDYSSGEAGSSSTIAGDGTLXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAIAADSAMVVGAISTA-----------------NGGSDVDGRXXXXXXXXXXXXXXXXXVEMIDGQAAAESSAKSIEGDAAAMDSXXXXXXXXXXXXXXXXXAGDEAEHGYGEXXXXXDATW--YDGAVLRATPMDDVDNPIVALSLDAAYDALLRRVHACHAKYTEGDRLFRSQRKAFTTYGLNGAQFFGVGLPAVRRAIEEIPDAIAAAISPPDDPARQYRFSLYQPSAAAVKQWQRQRAAQRAAVDVNPSGCARAEG-HQLVAANKAGRITRSLMRFAQELSEPAGGXXXXXXXXXXXXXXXXXXXXTPASGTGEGGNAAVKAKYRELKSKPTGNGLLVRRSHIHGWGLFAQDAFKAGDFIVEYMGELIRQCVADRREKKYEEMGIGSCYLFRIDRAADILDATRKGSLARFMNHCCEVRGVGK 5493
            RKDLL G+T  +KL PL  SPDPDA VGL+                                                  P+        A+W      VCE C   A +DE  L+ CE+CDRAYH  CL P+    P+G WICGQC SC  C  P  +T+WS +  +C++C+    R +   EL+                          V   A +A                            KP    +++W     A      CP C+ K D  D  + ECD C LWVH ACD           P+ DFFC+ACLG    EL+ T L           T + VAA  AA     D                      A+E A     AA     F              AT      R+   K S   + XXXXXXXXXXXXXXXW++  A D   +   G  A   A  L +RV  I+ERR R+ E  +      +R+ER+++A E  R +   V+  AL  + +L+  + +Q+     + +T++ Q K P +LR RAARF+RM R++ G R+RA+     A G            +  H+S ++    SAAAFL + G+EL   WPD  TK MA Q        PP  +LE                  GG  S  A D        G   A A              K        V    +PT                            A     RRR     GG +A                            P A    ++S L A S  A      XXXXXX                                                                G+ ++  SA E     A  A++    SR+   D  +   XXXXXXXXX          XXXXXXXXXXXXXXXXX                     GGG          XXX             SG   A  G    S GGG G         A+  XXXXXXXXXXXX                  LD  +    VPLRGW  +     V+  LG W+DVR C  C    D    GRLLP DDGQW HT C LWS  V+E+Q     G +  L KAR  GR   C LC  PGAT+ C +        C+E +H+ CA++AGC   N +  +                                                                       +A FP  S  +  +A+   AG+    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     A+     GA            R+ +VT+  + G+LA   A S +      VG  S   S I  S              R+    +   G   +   +  D  +          XXXXXXXXXXXXXXXXX                                    GGS     XXXXXXXXXXXXX     + +D +A      +    D+  M+                   G     G   XXXXX      Y G V R T MDD    ++  SLD  Y  ++  V  C     + D  FR +R    ++GLNG QFFG+G  AVR A+E  PDA++AA++P DDP RQYRF +  PS   V  WQR++AA++A V  NP+GCARAE   +  +  + GRITR+L+R A++L    GG  XXXXXXXXXXXXXXXXXX               A+YR LK++PTG GL VRRSHIHGWGLFA + F     +VEYMGE++RQCVAD RE KYEEMG+GSCYLFR D  A I+DATRKG+LARF+NHCC+   + +
Sbjct: 1374 RKDLLTGRTQPIKLRPLEKSPDPDAAVGLQ------------------------------------------------RQPI--------AAW------VCEVCTETAKSDESLLLMCELCDRAYHTYCLTPSTDKPPEGTWICGQCISCTTCDAPQVYTSWSSTKDSCQECILKKRREEGLQELEARREVLSCELRRRRAVYRETQARMDTVRDGAGDAYPPPARSSVSSREAKERTAFQKAKDALTKPLNGVSSQWDRGRVAADCDGSCPVCKKKSDGHDDNVAECDCCKLWVHHACDKGVGLVL--EHPELDFFCKACLGQDKMELRCTRLDVPGPPASHAVTPAAVAAGKAAASRTEDAAEAAFVERRLSKERASVVATAAVEEAKAAQKAADNSVHFAQVREAAAVAEEKRATAKAAEARQAVWKLS-GEEXXXXXXXXXXXXXXXXWDVGGAVDPPRDTHLGGTAXXXA--LCRRVALIQERRKRVVEVRDQERCRRRRDERQFEAWEKSRVQSQAVVDMALDRIEQLRMPD-KQDDVINRIASTSQEQAKVPYWLRTRAARFVRMQRYRLGERIRAQQRAHRAVG------------IQPHISHLMSRVLSAAAFLAVSGVELTLPWPDELTKQMALQ--------PPHFLLE------------------GGRKSESAADV------EGLPPAPAPRTPGPLLGCAGSRKEALSSPTAVERQQSPTXXXXXXXXXXXXXXXXXXXXXXVDPEYEAQLEMFRRRQANGGGGQMAHYPGDCPPLSPESHSPPSSPDRAADARHPQADHHRLSSGLPADSSAAXXXXXXXXXXXXXXXXXICSPPSYPRHQHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQTSSTGGVPLSLPSAREVEAKAAAAAVAAEAQSRIARKDLAKXXXXXXXXXXXX----------XXXXXXXXXXXXXXXXXASGVMAPAPLPGRRIAGHPRTGGGPXXXXXXXXXXXXSADVGAGDGLDSNSGSLGAPEGNSCSSGGGGSGSLKGAQELAATAIXXXXXXXXXXXXTAARDKEMLVSGVIDDGTLDELKT---VPLRGWGKN-----VETELGRWQDVRACCLCKATGDGDKTGRLLPLDDGQWIHTLCGLWSREVYENQNN--FGTICELYKARGRGRLLECSLCKEPGATVDCSSHK------CEEVYHYECALDAGCVFYNNLDVSCPLHHEEGVANSHGTT-------------------------------------------------------VAPFPLSSTGSVAAATEGAAGSRAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPWGKMTKSRAELVADPYRFMEATRGSTKGAWKVPSWSDGYALRVGAVTIQ-KLGRLAPQLAGSHTKSHMFPVGFRS---SRIFWSSKN--------PLQRTLYVCEILDGSKLTDHPLRHDEVVLGAGKKRKRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGGSXXXXXXXXXXXXXXXXXXAMDDQDGVDSEAGGAPPPR----DSDPMEVDGNARDRGDGDKTAPAGGGSTKWDGXXXXXXXXXXXXXSYRGVVFRVTMMDDPGTAMIDSSLDRLYTRVVAAVDECLQPLRKMDPCFRRRRTGHASFGLNGPQFFGIGYDAVRSAMEAWPDAVSAAVTPEDDPERQYRFVMNLPSEETVVAWQRRQAAEKAGVKENPNGCARAEVLSESSSTARTGRITRTLVRAAEKLGAADGGDAXXXXXXXXXXXXXXXXXX-------------XXAQYRMLKTQPTGYGLKVRRSHIHGWGLFALEEFPKDAMLVEYMGEVVRQCVADLREVKYEEMGVGSCYLFRADADA-IVDATRKGNLARFINHCCDPNAIAR 3104          
BLAST of mRNA_P-wetherbeei_contig517.1.2 vs. uniprot
Match: A0A6H5KGL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGL8_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 1.970e-69
Identity = 144/307 (46.91%), Postives = 188/307 (61.24%), Query Frame = 1
Query: 4594 GAVLRATPMDDVDNPIVALSLDAAYDALLRRVHACHAKYTEGDRLFRSQRKAFTTYGLNGAQFFGVGLPAVRRAIEEIPDAIAAAISPPDDPARQYRFSLYQPSAAAVKQWQRQRAAQRAAVDVNPSGCARAEG-HQLVAANKAGRITRSLMRFAQELSEPAGGXXXXXXXXXXXXXXXXXXXXTPASGTGEGG------NAAVKAKYRELKSKPTGNGLLVRRSHIHGWGLFAQDAFKAGDFIVEYMGELIRQCVADRREKKYEEMGIGSCYLFRIDRAADILDATRKGSLARFMNHCCEVRGVGK 5493
            G V R T MD     ++  SLD  Y  ++  V  C     + D  FR +R    ++GLNG QFFG+G  AVR A+E  PDA++AA++P DDP RQYRF +  PS   V  WQR++AA++A V  NP+GCARAE   +  +  + GRITR+L+R A++L    G                        SG+  GG        + +A+YR LK++PTG GL VRRSHIHGWGLFA + F     +VEYMGE++RQCVAD RE KYEEMG+GSCYLFR D  A I+DATRKG+LARF+NHCC+   + +
Sbjct:  254 GVVFRVTMMDHPGTAMIDSSLDRLYRRVVAAVDECLQPLRKMDPCFRRRRTGHASFGLNGPQFFGIGYDAVRSAMEAWPDAVSAAVTPEDDPERQYRFVINLPSEETVVAWQRRQAAEKAGVKENPNGCARAEVLSESSSTARTGRITRTLVRAAEKLGAADGSDAG-------------------GSGSLRGGLGXXXXXXSQQAQYRMLKTQPTGYGLKVRRSHIHGWGLFALEEFPKDAMLVEYMGEVVRQCVADLREVKYEEMGVGSCYLFRADADA-IVDATRKGNLARFINHCCDPNAIAR 540          
BLAST of mRNA_P-wetherbeei_contig517.1.2 vs. uniprot
Match: A0A6H5KG36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG36_9PHAE)

HSP 1 Score: 217 bits (552), Expect = 1.080e-52
Identity = 195/723 (26.97%), Postives = 268/723 (37.07%), Query Frame = 1
Query:  148 RKDLLVGQTAEVKLGPLVPSPDPDATVGLR--PVAQSWLTAVEAHFWCWSEACLYCGSGGAENDM-------------------------------------------------------------------------------------------VFCMDCGEAFHGWCVNVPLKTMDARARASWRCLNCKVCEACLTVAAADEGSLVYCEICDRAYHLNCLKPAPHAVPDGAWICGQCFSCERCREPHPFTAWSHSAKACRDCLRDAARRDQQAELQRXXXXXXXXXXXXXXXXXXXXXAEKAVATAASEAXXXXXXXXXXXXXXXXXXXXXXXXAMTLKPEVAAAAEWGVNVPALVGAHRCPSCETKWDETDMRMVECDSCGLWVHAACDPDP----PAPTPPAMPDFDFFCEACLGVRELQATLLATASGVAAPNAADXXXXXXXXXXXXXXXXXXXGNPALEAAALRAPAAIEGFPFPPATGAGGHGREP--------ARKKSRSRDGXXXXXXXXXXXXXXXWEM--ASDSASEFGEGSVAGSSARELAQRVRWIEERRARLQERTEVAAAVAQREEREWQAMEPQRARCVQVIGRALQEVLRLQKTNFEQEGYWKMLQATAKAQTKAPLFLRCRAARFLRMHRFKGGHRMRARVTELMAFGGRGGPGSDRGPLVTRHMSGVVRLATSAAAFLGMLGIELLQQWPDHFTKDMAAQRP 1995
            RKDLL G+T  +KL PL  SPDPDA+VGL+  P+A +W++  ++    W + CL+CG  G E                                                                                              +FC DCGE FH WC+   +  +D +A ASWRC NCKVCE C   A +DE  L+ CE+CDRAYH  CL P+    P+G WICGQC SC  C  P  +T+WS +  +C++C+    R +   EL+                          V   A +A                         +  KP    +++W     A      CP C+ K D  D  + ECD C LWVH ACD         P    +P      EA  GV   +AT         A  A D                      A+E A     AA     F     A     E         AR+      G               W++  A D   +   G  A ++A  L +RV  I+ERR R                             V V+  AL  + +L+  + +Q+     + +T++ Q+K P +LR RAARF+RM R++ G R+RA+     A G            +  H+S ++    SAAAFL + G+EL   WPD  TK MA Q P
Sbjct: 1694 RKDLLTGRTQPIKLRPLEKSPDPDASVGLQRQPIA-AWVSRPQSLMTEWLDLCLFCGCAGWEQQAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVANGCAPEGQRGGKAGENQPFTRLFCADCGECFHRWCLPSNIVPLDKKALASWRCPNCKVCEVCTETAKSDESLLLMCELCDRAYHTYCLTPSTDKPPEGTWICGQCISCTTCTAPQVYTSWSSTKDSCQECILKKRREEGLQELEARRGLLSCELRRRRAVYRETQARMDTVRDGAGDAYAPPARSSVSSREAKERTAFQKARDVLTKPLNGVSSQWDRGRVAADCDGSCPVCKKKSDVHDDNVAECDCCKLWVHHACDKGVGLVLEQPEIYVLPGAGLVLEA--GVAASKAT---------ASRAEDVADAALVERRLSKERASVVAAAAVEEAKAAQKAADNTVHFAQVREAAAVAEEKRATAKAAEARQAVWKLSGEERRRMFGGRGGQGGWDVGGAVDPPRDTHLGGTAAAAA--LCRRVALIQERRKR-----------------------------VAVVDMALDRIEQLRLPD-KQDDVINRIASTSQEQSKVPYWLRTRAARFVRMQRYRLGERIRAQQRAHRAVG------------IQPHISHLMSRVLSAAAFLAVSGVELTLPWPDELTKQMALQPP 2360          
BLAST of mRNA_P-wetherbeei_contig517.1.2 vs. uniprot
Match: A0A7S1VP27_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VP27_9STRA)

HSP 1 Score: 189 bits (481), Expect = 8.010e-49
Identity = 121/293 (41.30%), Postives = 167/293 (57.00%), Query Frame = 1
Query: 4651 SLDAAYDALLRRVHACHAKYTEGDRLF-------RSQRKAFTTYGLNGAQFFGVGLPAVRRAIEEIP--DAIAAAISPPDDPARQYRFSLYQPSAAAVKQWQRQRAAQRA--AVDVNPSGCARAEGHQLVA-ANKAGRITRSLMRFAQELSEPAGGXXXXXXXXXXXXXXXXXXXXTPASGTGEGGNAAVKAKYRELKSKPTGNGLLVRRSHIHGWGLFAQDAFKAGDFIVEYMGELIRQCVADRREKKYEEMGIGSCYLFRIDRAADILDATRKGSLARFMNHCCEVRGVGK 5493
            S+   Y  L+ RV   + +Y   + +F       ++ +KAF   GLNG QFFG GL  +R+A+E++P  +A+ A + P   P+  YRFS  QPS  ++   QR+RAA +A  A++ N SGCARAEG + V  +  +GRITR+L+R   + S  A                        A           + KYRE+K  P  + L  RRSHIHGWGLF +        I+EYMGE++RQCVADRRE++YE++GIGSCY+FR+D    I+DATR G +ARFMNHCC+     K
Sbjct:    2 SVSELYTTLVNRVRQVNQEYLSHNDVFSKHPTVRKTNKKAF---GLNGPQFFGFGLEHIRKALEKLPGVEAVVARLHPRMSPS--YRFSFVQPSKESIVALQRKRAALQAERALENNSSGCARAEGTKAVTKSGGSGRITRALVRSVTDASPLA----LITRGDTAVSEEQRAKQRQQAESN--------QRKYREMKVVPLDDRLAARRSHIHGWGLFTKVDIPTDGMIIEYMGEVVRQCVADRREREYEKLGIGSCYMFRLD-LQRIVDATRIGCMARFMNHCCQPNAYAK 276          
BLAST of mRNA_P-wetherbeei_contig517.1.2 vs. uniprot
Match: A0A7S1DDE7_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DDE7_CYCTE)

HSP 1 Score: 187 bits (476), Expect = 1.770e-48
Identity = 117/307 (38.11%), Postives = 171/307 (55.70%), Query Frame = 1
Query: 4591 DGAVLRATPMDDVDNPIVALSLDAAYDALLRRVHACHAK-YTEGD---RLFRSQRKAFTTYGLNGAQFFGVGLPAVRRAIEEIPDAIAAAISPPDDPARQYRFSLYQPSAAAVKQWQRQRAAQRAAVDV-NPSGCARAEGHQ-LVAANKAGRITRSLMRFAQELSEPAGGXXXXXXXXXXXXXXXXXXXXTPASGTGEGGNAAVKAKYRELKSKPTGNGLLVRRSHIHGWGLFAQDAFKAGDFIVEYMGELIRQCVADRREKKYEEMGIGSCYLFRIDRAADILDATRKGSLARFMNHCCEVRGVGK 5493
            D  +  AT  D+  +PI   +++  Y+ ++ RVH  +++ Y++G+   +L   ++ +  T+GLNG QFFG+GL  +R+ +E + + + A ++P  + +  YRF   QPS   V   QR+RAA  A   + N SGCAR EG      +  +GRITR+L+R A    EPA                             +    + + KY+E+KS P    L  RRSHIHGWGLF +        IVEY+GE +RQC+ D+RE+ YE+ GIGSCY+FR+D    I+DATR GS+ARFMNHCC+     K
Sbjct:   16 DSILFTATAADNPAHPITGRTVNEVYNTVVSRVHRINSEFYSKGNVYSKLPVRRKSSKKTFGLNGPQFFGIGLTHIRKRLEAL-EGVEAVVAPLTESSPSYRFCFKQPSIETVMGLQRKRAAAAAENALENASGCARTEGMTAFTRSGGSGRITRALVRSAD--GEPA----------------LLGKRTDAEEKKAKADRESNQQKYKEMKSVPLQERLAARRSHIHGWGLFCKIDLPKDAMIVEYVGETVRQCIGDKREQAYEKSGIGSCYMFRLD-LQRIVDATRIGSMARFMNHCCKPNAYAK 302          
BLAST of mRNA_P-wetherbeei_contig517.1.2 vs. uniprot
Match: A0A7S2R6Y7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6Y7_9STRA)

HSP 1 Score: 179 bits (454), Expect = 1.770e-45
Identity = 116/313 (37.06%), Postives = 162/313 (51.76%), Query Frame = 1
Query: 4597 AVLRATPMDDVDNPIVALSLDAAYDALLRRV----HACHAKYTEGDRLFRSQRKAFTTYGLNGAQFFGVGLPAVRRAIEEIPDAIAAAISP--------PDDPARQYRFSLYQPSAAAVKQWQRQRAAQRAAVDVNPSGCARAEGHQLVAA--NKAGRITRSLMRFAQELSEPAGGXXXXXXXXXXXXXXXXXXXXTPASGTGEGGNAAVKAKYRELKSKPTGNGLLVRRSHIHGWGLFAQDAFKAGDFIVEYMGELIRQCVADRREKKYEEMGIGSCYLFRIDRAADILDATRKGSLARFMNHCCEVRGVGK 5493
            A+ R T  DD+++PIV  + +  +  L + V     A  A+           RK+  ++GL  AQ+ G GL  V+R +E +P A+ A + P        PD     Y      PS A +   QR  AAQ A V  NPSGCAR+EG  +V++  +K  R+TR L+    ++  P G                                A V   Y++++S+P  N L+ +RSH+HGWGLF +      D IVEYMGE IR  VAD REK+YE+ G+GSCYLFR+D+  +I+DATRKG +ARF+NH CE     K
Sbjct:   17 AIFRVTAADDLEHPIVGFTPEQVFGQLCKEVSTRRRAAIAEVIGQALTAPGPRKSRRSFGLTAAQWIGFGLSVVQRRLEHLPGAVHAKVVPSSAEGVGDPDLIPPVYYSRYIMPSDAEILGAQRASAAQDATVKPNPSGCARSEGWAIVSSEQSKKRRVTRQLIDDMADVLPPRGRRAKTASDTEDLALDP----------------ATVNNLYKKMRSEPMENRLVAKRSHVHGWGLFVRVEVAKHDMIVEYMGESIRSIVADLREKQYEDQGVGSCYLFRLDKD-EIVDATRKGCMARFINHSCEPNAYTK 312          
BLAST of mRNA_P-wetherbeei_contig517.1.2 vs. uniprot
Match: A0A7S4J1Z5_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J1Z5_9STRA)

HSP 1 Score: 184 bits (466), Expect = 9.620e-43
Identity = 125/316 (39.56%), Postives = 171/316 (54.11%), Query Frame = 1
Query: 4597 AVLRATPMDDVDNPIVALSLDAAYDALLRRVHACHAK-YTEGDRLF-----RSQRKAFTTYGLNGAQFFGVGLPAVRRAIEEIPD--AIAAAISPPDDPARQYRFSLYQPSAAAVKQWQRQRAAQRAAVDV-NPSGCARAEGHQLVA-ANKAGRITRSLMRFAQELSEPAGGXXXXXXXXXXXXXXXXXXXXTPASGTGEGGN-------AAVKAKYRELKSKPTGNGLLVRRSHIHGWGLFAQDAFKAGDFIVEYMGELIRQCVADRREKKYEEMGIGSCYLFRIDRAADILDATRKGSLARFMNHCCEVRGVGK 5493
            +V   T  D    PI   ++  AY+ L+RRV   +A  ++EGD        R +RK    +GLNG QFFG GL  VR+ +E +P   A+A  +SP   P   Y F    P    +K  QR+RA + A   + N SGCAR EG   VA +  +GRITR+L++ A+E                           + +  TG+G N       + ++ KYRE+KS P  + L  +RSHIHGWGLF +++      IVEYMGE IRQ VAD+RE+ YE  G+GSCY+FR+D+   I+DAT  G +ARFMNHCC+     K
Sbjct: 1374 SVFSITAADAPGTPIKGHTVMEAYNLLIRRVEQANATMFSEGDMFSSKPVKRGRRKH--VFGLNGPQFFGFGLTQVRKKLETLPGIAAVAVPLSPSTQP---YLFCFKHPKEEEIKDLQRERAVKAAEKALENVSGCARTEGMCAVARSGGSGRITRALVKRAEE-----------------------DKSSSLSGSTGKGRNNLSESVDSNIQEKYREMKSVPIKDRLEAKRSHIHGWGLFTKNSLPKHAMIVEYMGETIRQRVADKRERAYETSGVGSCYMFRLDQTR-IVDATMIGCMARFMNHCCQPNAYAK 1660          
BLAST of mRNA_P-wetherbeei_contig517.1.2 vs. uniprot
Match: A0A7S3P7Q4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P7Q4_9STRA)

HSP 1 Score: 181 bits (460), Expect = 4.230e-42
Identity = 122/297 (41.08%), Postives = 163/297 (54.88%), Query Frame = 1
Query: 4630 DNP---IVALSLDAAYDALLRRVHACHA-KYTEGD---RLFRSQRKAFTTYGLNGAQFFGVGLPAVRRAIEEIPDAIAAAISPPDDPARQYRFSLYQPSAAAVKQWQRQRAAQRAAVDV-NPSGCARAEGHQLVA-ANKAGRITRSLMRFAQELSEPAGGXXXXXXXXXXXXXXXXXXXXTPASGTGEGGNAAVKAKYRELKSKPTGNGLLVRRSHIHGWGLFAQDAFKAGDFIVEYMGELIRQCVADRREKKYEEMGIGSCYLFRIDRAADILDATRKGSLARFMNHCCEVRGVGK 5493
            DNP   I + S   AY AL+ RV   +A  ++ GD   RL   +R    T+GLNG QFFG GL  +RR +E     + A ++P    + +YRF   QP+  +++  QR+RAA +A   + N +GCAR EG + V  +  +GRITR+L+R A EL + + G                               A V+ KYR++ S P    L  RRSHIHGWGLF +      D IVEYMGE++RQ VAD+REK+YE  G GSCY+FR+DR   I+DAT  G +ARFMNH C      K
Sbjct: 1168 DNPGCRIRSQSASIAYSALMDRVRKVNAVSFSHGDLFSRLPMMRRTRRKTFGLNGNQFFGFGLNHIRRMLESSA-GVEAVVTPLTPNSPRYRFCFVQPTMESIRGLQRKRAAVKAEAALENSTGCARTEGLKAVTRSGGSGRITRALVRSADELVDTSTGNSMEKMSGDKSE------------------RAIVQIKYRKMCSVPMEQRLAARRSHIHGWGLFTKIDIPQNDPIVEYMGEVVRQAVADKREKQYEVSGEGSCYMFRLDRTR-IIDATMIGCMARFMNHSCTSNAYAK 1444          
BLAST of mRNA_P-wetherbeei_contig517.1.2 vs. uniprot
Match: A0A7S2A0R2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A0R2_9STRA)

HSP 1 Score: 181 bits (458), Expect = 7.010e-42
Identity = 120/300 (40.00%), Postives = 160/300 (53.33%), Query Frame = 1
Query: 4600 VLRATPMDDVDNPIVALSLDAAYDALLRRV-HACHAKYTEGD-----RLFRSQRKAFTTYGLNGAQFFGVGLPAVRRAIEEIPDAIAAAISPPDDPARQYRFSLYQPSAAAVKQWQRQRAAQRAAVDV-NPSGCARAEG-HQLVAANKAGRITRSLMRFAQELSEPAGGXXXXXXXXXXXXXXXXXXXXTPASGTGEGGNAAVKAKYRELKSKPTGNGLLVRRSHIHGWGLFAQDAFKAGDFIVEYMGELIRQCVADRREKKYEEMGIGSCYLFRIDRAADILDATRKGSLARFMNHCCE 5475
            +   +  DD    I   S++  Y+AL  R+  A H+ Y+ GD      + R+ +K    YGLNG QFFG GL  VR A+E     IAA   P  + +  YRF  Y P  + +   QR+RAA  A   + N SGCARAEG H    +  +GRIT +L+R A+E S                             G  +    + +AKY E++S P    L  +RSHIHGWGLF +        IVEYMGE +RQC+AD+RE+ YE+ GIGSCY+FR+D A  I+DAT  G +ARFMNH C+
Sbjct: 1110 IFTISAADDPTTVIRGRSVNEVYNALNDRICKATHSMYSHGDFCSPLPIKRNHKKKI--YGLNGPQFFGFGLNYVREALESC-HGIAAVTVPLVENSPTYRFCFYHPKRSDIMDLQRKRAAAAAEKALENASGCARAEGSHAFARSGGSGRITLALVRNAEEASVSPNAPKAHAKGRHIP-------------GESKSEMVSNQAKYDEMRSVPMDQRLAAKRSHIHGWGLFTKLRLSKHSMIVEYMGETVRQCIADKRERAYEKSGIGSCYMFRLD-AQRIVDATTIGCMARFMNHSCQ 1392          
BLAST of mRNA_P-wetherbeei_contig517.1.2 vs. uniprot
Match: A0A1Z5KEJ5_FISSO (Histone-lysine N-methyltransferase MLL3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KEJ5_FISSO)

HSP 1 Score: 179 bits (454), Expect = 2.630e-41
Identity = 116/305 (38.03%), Postives = 162/305 (53.11%), Query Frame = 1
Query: 4597 AVLRATPMDDVDNPIVALSLDAAYDALLRRVHACHAK-YTEGDRLFR---SQRKAFTTYGLNGAQFFGVGLPAVRRAIEEIPDAIAAAISPPDDPARQYRFSLYQPSAAAVKQWQRQRAAQRAAVDV-NPSGCARAEGHQLVA-ANKAGRITRSLMRFAQELSEPAGGXXXXXXXXXXXXXXXXXXXXTPASGTGEGGNAAVKAKYRELKSKPTGNGLLVRRSHIHGWGLFAQDAFKAGDFIVEYMGELIRQCVADRREKKYEEMGIGSCYLFRIDRAADILDATRKGSLARFMNHCCEVRGVGK 5493
            A     P DD  + I A S+ +AY   + R+   +   +++GD L R   ++R    T+GLNG QFFG GL  +RR +E +P+ + A ++P       YRF   QP    V    R+RAA  A + + N SGCAR EG + VA +  +GRITR+L+R A+E+                                 +      + KY+ +KS P    L  RRSHIHGWGLF +   +  D I EYMGE+IRQ ++D+RE+ YE  G GSCY+FR+D    I+DAT+ GS+ARFMNH C+     K
Sbjct: 1492 AEFAIIPGDDPTSTIRANSISSAYTTFMDRLRKVNFDCFSQGDLLSRLPMTRRSRKKTFGLNGPQFFGFGLDCIRRKLETLPN-VEAVVTPLTPNFTSYRFCFSQPDIETVMALHRKRAAAHAELALENASGCARTEGIKAVARSGGSGRITRALVRSAEEVESNTTSQSKR------------------TEDRAKADRNMYQVKYKRMKSVPIEERLAARRSHIHGWGLFTKIDIRKNDPITEYMGEVIRQAISDKRERAYEISGEGSCYMFRLD-LQRIVDATKIGSMARFMNHSCQSNAYAK 1776          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig517.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHU3_ECTSI4.250e-8532.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KGL8_9PHAE1.970e-6946.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KG36_9PHAE1.080e-5226.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1VP27_9STRA8.010e-4941.30Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S1DDE7_CYCTE1.770e-4838.11Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2R6Y7_9STRA1.770e-4537.06Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4J1Z5_9STRA9.620e-4339.56Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S3P7Q4_9STRA4.230e-4241.08Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2A0R2_9STRA7.010e-4240.00Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1Z5KEJ5_FISSO2.630e-4138.03Histone-lysine N-methyltransferase MLL3 n=2 Tax=Fi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig517contigP-wetherbeei_contig517:251..9674 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LHU3
Preferred namePHF6
PFAMsFYRC,FYRN,PHD,SET,zf-CXXC,zf-HC5HC2H
Model size5493
Max annot lvl2759|Eukaryota
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K09186,ko:K09188,ko:K11422,ko:K14959,ko:K18494,ko:K22371
KEGG ReactionR03875,R03938,R04866,R04867
KEGG Pathwayko00310,ko04934,ko05202,map00310,map04934,map05202
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000122,GO:0000123,GO:0000902,GO:0000904,GO:0000976,GO:0000977,GO:0000980,GO:0000981,GO:0001012,GO:0001067,GO:0001158,GO:0001227,GO:0001541,GO:0001654,GO:0001894,GO:0002376,GO:0002520,GO:0002682,GO:0003002,GO:0003006,GO:0003008,GO:0003674,GO:0003676,GO:0003677,GO:0003680,GO:0003682,GO:0003690,GO:0003700,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005694,GO:0005700,GO:0005730,GO:0005737,GO:0005794,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006325,GO:0006338,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006464,GO:0006473,GO:0006475,GO:0006479,GO:0006725,GO:0006807,GO:0006928,GO:0006935,GO:0006996,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007389,GO:0007399,GO:0007409,GO:0007411,GO:0007423,GO:0007444,GO:0007482,GO:0007548,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007623,GO:0007632,GO:0008023,GO:0008092,GO:0008150,GO:0008152,GO:0008157,GO:0008168,GO:0008170,GO:0008213,GO:0008270,GO:0008276,GO:0008285,GO:0008306,GO:0008354,GO:0008406,GO:0008542,GO:0008585,GO:0008757,GO:0009058,GO:0009059,GO:0009314,GO:0009416,GO:0009605,GO:0009628,GO:0009653,GO:0009790,GO:0009791,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009952,GO:0009987,GO:0009994,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0010646,GO:0012505,GO:0015631,GO:0016020,GO:0016043,GO:0016070,GO:0016278,GO:0016279,GO:0016458,GO:0016477,GO:0016569,GO:0016570,GO:0016571,GO:0016573,GO:0016604,GO:0016607,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018024,GO:0018026,GO:0018027,GO:0018130,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019899,GO:0019902,GO:0019903,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0030030,GO:0030097,GO:0030154,GO:0030182,GO:0030728,GO:0031056,GO:0031058,GO:0031060,GO:0031062,GO:0031090,GO:0031175,GO:0031248,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031401,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032259,GO:0032268,GO:0032270,GO:0032409,GO:0032411,GO:0032501,GO:0032502,GO:0032504,GO:0032774,GO:0032784,GO:0032786,GO:0032879,GO:0032922,GO:0032968,GO:0032989,GO:0032990,GO:0032991,GO:0033043,GO:0033044,GO:0034243,GO:0034641,GO:0034645,GO:0034654,GO:0034708,GO:0034968,GO:0035065,GO:0035097,GO:0035162,GO:0035216,GO:0035295,GO:0035326,GO:0035640,GO:0036211,GO:0040011,GO:0040029,GO:0042054,GO:0042127,GO:0042221,GO:0042330,GO:0042393,GO:0042592,GO:0042800,GO:0042802,GO:0042803,GO:0042826,GO:0043021,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0043543,GO:0043565,GO:0043933,GO:0043966,GO:0043967,GO:0043984,GO:0044030,GO:0044085,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044648,GO:0044665,GO:0044703,GO:0044728,GO:0044877,GO:0045137,GO:0045322,GO:0045595,GO:0045637,GO:0045652,GO:0045815,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046545,GO:0046660,GO:0046872,GO:0046914,GO:0046983,GO:0048096,GO:0048167,GO:0048168,GO:0048172,GO:0048468,GO:0048477,GO:0048511,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048536,GO:0048568,GO:0048583,GO:0048584,GO:0048608,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048736,GO:0048737,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0048871,GO:0048872,GO:0048873,GO:0050776,GO:0050789,GO:0050793,GO:0050794,GO:0050804,GO:0050877,GO:0050890,GO:0050896,GO:0051049,GO:0051050,GO:0051052,GO:0051053,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051219,GO:0051239,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051568,GO:0051569,GO:0051571,GO:0051674,GO:0051704,GO:0060216,GO:0060249,GO:0060255,GO:0060429,GO:0061458,GO:0061564,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070577,GO:0071339,GO:0071440,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0080182,GO:0090304,GO:0097110,GO:0097159,GO:0097485,GO:0097659,GO:0099177,GO:0120036,GO:0120039,GO:0140030,GO:0140033,GO:0140096,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901532,GO:1901564,GO:1901576,GO:1901674,GO:1901983,GO:1902036,GO:1902275,GO:1902493,GO:1902494,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1903706,GO:1905269,GO:1905642,GO:1990234,GO:1990837,GO:2000026,GO:2000112,GO:2000113,GO:2000615,GO:2000736,GO:2000756,GO:2001023,GO:2001025,GO:2001038,GO:2001040,GO:2001141,GO:2001252
Exons15
Evalue6.97e-86
EggNOG OGsCOG2940@1|root,KOG1080@2759|Eukaryota,KOG1084@2759|Eukaryota,KOG4443@2759|Eukaryota
EC2.1.1.43,2.3.2.26
Descriptionhistone methyltransferase activity (H3-K4 specific)
Cds size5493
COG categoryDK
BRITEko00000,ko00001,ko01000,ko03000,ko03036,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186775.986416-CDS-P-wetherbeei_contig517:250..4601683186775.986416-CDS-P-wetherbeei_contig517:250..460Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig517 251..460 -
1683186775.999779-CDS-P-wetherbeei_contig517:743..12801683186775.999779-CDS-P-wetherbeei_contig517:743..1280Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig517 744..1280 -
1683186776.0094821-CDS-P-wetherbeei_contig517:1468..17401683186776.0094821-CDS-P-wetherbeei_contig517:1468..1740Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig517 1469..1740 -
1683186776.0189764-CDS-P-wetherbeei_contig517:1929..27561683186776.0189764-CDS-P-wetherbeei_contig517:1929..2756Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig517 1930..2756 -
1683186776.028039-CDS-P-wetherbeei_contig517:2975..31901683186776.028039-CDS-P-wetherbeei_contig517:2975..3190Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig517 2976..3190 -
1683186776.0372963-CDS-P-wetherbeei_contig517:3872..42051683186776.0372963-CDS-P-wetherbeei_contig517:3872..4205Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig517 3873..4205 -
1683186776.0568752-CDS-P-wetherbeei_contig517:4384..56901683186776.0568752-CDS-P-wetherbeei_contig517:4384..5690Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig517 4385..5690 -
1683186776.07022-CDS-P-wetherbeei_contig517:5928..61011683186776.07022-CDS-P-wetherbeei_contig517:5928..6101Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig517 5929..6101 -
1683186776.079172-CDS-P-wetherbeei_contig517:6398..65421683186776.079172-CDS-P-wetherbeei_contig517:6398..6542Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig517 6399..6542 -
1683186776.0879116-CDS-P-wetherbeei_contig517:6997..74201683186776.0879116-CDS-P-wetherbeei_contig517:6997..7420Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig517 6998..7420 -
1683186776.0959797-CDS-P-wetherbeei_contig517:7789..80351683186776.0959797-CDS-P-wetherbeei_contig517:7789..8035Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig517 7790..8035 -
1683186776.1040282-CDS-P-wetherbeei_contig517:8122..83271683186776.1040282-CDS-P-wetherbeei_contig517:8122..8327Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig517 8123..8327 -
1683186776.111799-CDS-P-wetherbeei_contig517:8529..87571683186776.111799-CDS-P-wetherbeei_contig517:8529..8757Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig517 8530..8757 -
1683186776.1220145-CDS-P-wetherbeei_contig517:9038..91631683186776.1220145-CDS-P-wetherbeei_contig517:9038..9163Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig517 9039..9163 -
1683186776.1301615-CDS-P-wetherbeei_contig517:9425..96741683186776.1301615-CDS-P-wetherbeei_contig517:9425..9674Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig517 9426..9674 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig517.1.2prot_P-wetherbeei_contig517.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig517 251..9674 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig517.1.2

>prot_P-wetherbeei_contig517.1.2 ID=prot_P-wetherbeei_contig517.1.2|Name=mRNA_P-wetherbeei_contig517.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=1831bp
AREARAFHAAAEAVFARQKHATRPSRRHAEAIKERLAAKAAERKAPPVPR
KDLLVGQTAEVKLGPLVPSPDPDATVGLRPVAQSWLTAVEAHFWCWSEAC
LYCGSGGAENDMVFCMDCGEAFHGWCVNVPLKTMDARARASWRCLNCKVC
EACLTVAAADEGSLVYCEICDRAYHLNCLKPAPHAVPDGAWICGQCFSCE
RCREPHPFTAWSHSAKACRDCLRDAARRDQQAELQRRRQILLREKRRRRA
AHDAAAAAEKAVATAASEAAAAEAAVAAAARAESARAVAKRAVAMTLKPE
VAAAAEWGVNVPALVGAHRCPSCETKWDETDMRMVECDSCGLWVHAACDP
DPPAPTPPAMPDFDFFCEACLGVRELQATLLATASGVAAPNAADAEGAPP
PAAAAAVRAPPPTGNPALEAAALRAPAAIEGFPFPPATGAGGHGREPARK
KSRSRDGGAVVAAAAGGRGGGGWEMASDSASEFGEGSVAGSSARELAQRV
RWIEERRARLQERTEVAAAVAQREEREWQAMEPQRARCVQVIGRALQEVL
RLQKTNFEQEGYWKMLQATAKAQTKAPLFLRCRAARFLRMHRFKGGHRMR
ARVTELMAFGGRGGPGSDRGPLVTRHMSGVVRLATSAAAFLGMLGIELLQ
QWPDHFTKDMAAQRPVVLAAKPPFEMLEALFGGRGGGGGGGNKNSWGGDS
SGGAEDCGGSDGGRGCVSADATGVREGGQGGEGGRKADTGGNAGVTSAAA
PTAGSGAGDSHLRRRDGLAAGGPVAVTDPGAMEEDVASSLAAGSGPAAGE
TATAAAAEASGGTWASGIAVAAVSAGEGPDARARTALSVMDVSRLVPPDS
NRPSAAAVVAAASPDFESGADEAASMSSEACSTLPDDARRGSPNPPPPAR
FEPAAAVAAAGDGGGFGGRGFGGIGFSGGGFGGIGFDRSGGAPAAAGTVA
RSPGGGIGMPPTQSAAEASAKAAAVAAAAAVGNGGSATAGGSSSGSAGGS
PLDGPEIPLLVPLRGWESDDAHAVVKQALGPWEDVRKCTFCHDASDSATC
GRLLPFDDGQWTHTQCALWSGGVFEDQRVGMCGRLRGLAKARSAGRTARC
RLCGLPGATLRCEAQPPGPRGYCDESFHFPCAVEAGCFMANTMTAAAAAG
HPGGRRRRAAAAAAAAGLSRSSSDGSGKRAGARGSGRRQSSPIAEVARSS
GGGGGGGSTAGGGGGGQLAGFPAGSGSAWDSASVTDAGTILSDGGSLAAA
DGAAAIGVDGSATAPDGDGAANVDCSAAGVGTAVAAVATTVAVEGGAMAV
EESAASAFEDSGALSRLSSVTVDVRDGKLAAATSSSTPGCDGVGAASDGA
SNIGGSGGTGEADGGALTTARSAMAVDYSSGEAGSSSTIAGDGTLVAEGS
TAATADSAAAEGGAAATPGSAAAVAIAADSAMVVGAISTANGGSDVDGRG
ASAADGGSAALADDNAVEMIDGQAAAESSAKSIEGDAAAMDSDGDAAAGG
ADDAAAAAVAGDEAEHGYGEGEGEGDATWYDGAVLRATPMDDVDNPIVAL
SLDAAYDALLRRVHACHAKYTEGDRLFRSQRKAFTTYGLNGAQFFGVGLP
AVRRAIEEIPDAIAAAISPPDDPARQYRFSLYQPSAAAVKQWQRQRAAQR
AAVDVNPSGCARAEGHQLVAANKAGRITRSLMRFAQELSEPAGGGGGAGG
GGGGTGGGLAAAAATPASGTGEGGNAAVKAKYRELKSKPTGNGLLVRRSH
IHGWGLFAQDAFKAGDFIVEYMGELIRQCVADRREKKYEEMGIGSCYLFR
IDRAADILDATRKGSLARFMNHCCEVRGVGK
back to top

mRNA from alignment at P-wetherbeei_contig517:251..9674-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig517.1.2 ID=mRNA_P-wetherbeei_contig517.1.2|Name=mRNA_P-wetherbeei_contig517.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=9424bp|location=Sequence derived from alignment at P-wetherbeei_contig517:251..9674- (Phaeothamnion wetherbeei SAG_119_79)
GCCCGTGAGGCGCGCGCCTTCCACGCCGCCGCCGAAGCCGTCTTCGCACG GCAGAAGCATGCGACGCGGCCGTCGCGGCGGCACGCCGAGGCCATAAAGG AGCGGCTGGCAGCCAAGGCGGCGGAGCGCAAGGCACCGCCGGTGCCGCGG AAGGACCTGCTTGTTGGGCAGACGGCCGAGGTGAAGCTCGGGCCGTTGGT GCCGTCACCTGACCCGGACGCCACCGTGGGGCTTCGGCCCGTCGCCCAGG TGATATAAGCCGGTCTAGCTGGTGCCAAAGTTGATGGCGGCTTTGGGAAG TGACTTTGCATAACACTTCTCTTTATATAGGAGTTTCCTTTGTTTTATTT TGTTTTGTTTCCGGCCTATGGTAAACCATCTTGTTAGTTCAAGCAAGTTG CCGTCCGTGTGGAGTACAAGAATTTGCTAAACTTGGGTTTTCCCTCAATC GCTACAACTGCACTTCCGCTGCCGCTGCGCGACCTGCCAAATCCGAAAAC GAGGCGAGAAGTCGTGGCTGACGGCAGTGGAGGCGCACTTCTGGTGCTGG TCCGAGGCATGCCTCTACTGCGGCAGCGGCGGCGCCGAGAACGACATGGT CTTCTGCATGGACTGCGGGGAGGCCTTCCATGGCTGGTACGTTTTCCCCC TGCCGCACTTTGTTGTTGCTGCTGCTACCATTTTGTTGCGCGCGTTTTTG TCGATCTTTTGCTTGTTCTTTCTTCCATCTTGACCAGTGTCTACAGGAGG TGCTTGTACTCAACCTTGAGCATTTTTTGCTATTTTTTTACTACCGATTT GCTGTAATACTTCTGGAACTGCAAGCACCCGACCCTGAGCATTGCGTGGG CGTTTCCGTTGTGCCCTTCCGTCGACGGCGACTGCGGCTCTACGGCTGGA TCTCTGCGAAACACCAGGTGCGTGAACGTGCCGCTGAAGACGATGGACGC GCGGGCGCGTGCGAGCTGGCGGTGTCTGAACTGCAAGGTATGCGAGGCGT GCCTCACCGTGGCGGCGGCTGACGAGGGCAGCCTCGTCTACTGCGAGATC TGCGACCGCGCCTACCACCTCAACTGCCTCAAGCCCGCGCCGCACGCCGT GCCCGACGGCGCCTGGATCTGCGGCCAGTGCTTCAGCTGCGAAAGGTGAG GGAGAGGAGGCTCACGATCAGCTTTTGGCAGGACATTATTCTCATACATT CGAATTTGTTGAAAAAGGGTCAACCGATTGCCTCTTGCCGGCCATCATTT GGCCTGCTCTGATTTGTGCCGGACCTGAGGCTTGCCGCCAGCCCACACCC TTTCTCAGCTGTTCGCACATATTACTATTATTTTTTCTCGGCGGCAGATG CCGGGAGCCGCACCCATTTACGGCGTGGAGCCACTCGGCCAAGGCTTGCC GCGACTGCCTCCGGGACGCGGCGCGGCGCGACCAACAGGCAGAGCTTCAG CGGCGCCGCCAGATCCTCCTCCGCGAGAAGCGGCGGCGGCGGGCGGCGCA CGACGCCGCTGCCGCCGCCGAGAAGGCGGTGGCTACCGCCGCATCCGAGG CGGTCGCCGCCGAAGAAACCGCCGCGGCCGCGGCGGCGTCGTCGCCGTTC GGGCAGCAGGGCAGCGGCGGCGACGGTGGCTGGCGGCAGGCGGCGGCGGA GGCGGCGGTGGCGGCGGCGGCGCGGGCAGAAAGTGCCCGGGCGGTGGCGA AGCGCGCGGTGGCGATGACGCTCAAGCCGGAGGTGGCGGCGGCCGCCGAA TGGGGGGTGAACGTGCCGGCGCTTGTCGGCGCGCATCGCTGCCCGTCCTG CGAGACCAAGTGGGACGAAACAGACATGCGCATGGTGGAGTGCGACAGCT GCGGGCTGTGGGTGCATGCCGCCTGCGATCCGGACGTCGAGCGGATCCTG GCGGCGCAGCAGCGGCAGTTGGCGGCGGCGGCCGAGGCGGCGGCGGCGGC GAAAGCCGCGGCAGAGGAAGCGCTGGCGGTGGCCGAGCTGCGGCGGTGGG GGGACCACGTGGCACAGCCGCGGCAGCCGACGGTGGGTTGTCTTTATTCT TGGGGGTTTGTTTGCCGTATGGTGGTGATGTGCTCTGCCGGGATGGACGA AGAGAGGCACACTTCTGTGGACAACGGCTTTTGCGTGGACAAATTTGTGA TTATCTGCAGGACACACCAGGTACGCATACTCCTTACCATAACATCCTTC CTTTCTTTCCCTGAACTTCGTTCCTTGAAATGCTCCGCGACGGTCCTATC GTAGCCACCTGCGCCGACGCCGCCGGCGATGCCGGACTTCGATTTCTTCT GCGAGGCGTGCCTCGGCGTGCGAGAATTGCAAGCGACGCTCCTGGCGACG GCTTCGGGCGTGGCGGCCCCGAACGCTGCTGACGCGGAGGGAGCGCCGCC GCCGGCGGCGGCAGCGGCGGTAAGGGCGCCGCCGCCAACGGGAAACCCGG CGTTGGAGGCAGCCGCCCTCCGGGCGCCTGCGGCAATCGAAGGGTTCCCC TTCCCGCCGGCGACCGGAGCAGGTGGCCACGGCAGGGAGCCCGCGCGCAA GAAGTCTCGGTCGCGAGATGGTGGCGCGGTCGTGGCGGCGGCGGCGGGCG GCAGGGGTGGCGGCGGGTGGGAGATGGCATCGGATTCCGCGTCTGAGTTT GGTGAGGGGAGCGTCGCCGGCAGTAGCGTCATGGGCGGGCCGAGCACGGC GACGGGCACCGCGTGGACGGCATCCGAGGCGGGGGACAGACCGGACGGCG ACGCGCGGCCGACGCGGCCGAGAAAGCGGCTCGTTGAGTCGTTGTATGGA TCTGAGGTACGTTTCTCGATATTTCTGCATGCCGGGTAGTTTCTGTGGGA AGTACACGATTAAGATGATGGAAAGGAGTAGTTTAAATATTCGCCGCTTG CGGCTGTTCTACCGCGGGTCGCGTTGGTCCGAGTTGCCGAACCGATTATC CCGACATGTTCAACAACACCTTTTATGGAGGTTTTGCGACCACCAGAATA AGTTTACGGTGTAAAGAGCAATTTCTAAAGGCTTTTTTCCCCAACCATCG TTTCCTGTGAACGCTGCGCCAGGCGGCGACCTCGGACGGCGAGGCGGTGG ACGACACCAACTCCGCGGCCTACCAGGTGGAGGCGCGGGAGCTGGCGCAG CGCGTGCGGTGGATTGAGGAGCGGCGGGCGCGGTTACAGGAGCGGACAGA GGTGGCGGCGGCCGTGGCGCAGCGAGAGGAGCGCGAGTGGCAGGCGATGG AACCGCAGCGGGCGCGCTGTGTGCAGGTAAGTTGCGTTTTGCGTGAGGGC CGTTTTAAAAGCTGGAGCCTTGGGAGTGCTTTTGCCAGGTGCCACACATT CGTTGCAGAAACGCCGTTTTGGCGGGTTTGCGGGTGTTTTTCTCACAACC AGCGTTCTCATCTTCTTGCAAACAACCCCAACTCCTCCTCACCCCCTCCC CCGCGTCCCCCTTCCGTTTTCCCGCATGTTGCTGCTGCCTTAACCGCCGC CGCCCGTCCTACCACCGCGGTTCTACCGCTGCCGCCGCTCCTCCAACCAC GGCGCTGTCGCCGCCGGCGCCAGGTCATCGGCCGGGCACTGCAGGAGGTG CTGCGCTTGCAGAAGACGAACTTCGAGCAGGAAGGGTACTGGAAGATGCT GCAGGCCACAGCGAAGGCGCAGACCAAGGCGCCCCTCTTTCTGCGCTGCC GGGCAGCGCGTTTCCTGCGGATGCACCGCTTCAAGGGCGGCCACCGGTGA GAGACGACGCCATGGAACCCTTGCAGAGGGGGCCTTCGTTAACTTGTTGT GGCGAAAGGAGGCAAATATAAGAAGGAAGTCTCGCGAACTTTCTTTCTTT TTCCAACTGCACTGAGGAGAAATGAATGAACTTTGAGAGCGCATTCATTG ACACTAAATCCACCCATCATGCTCCGCATATTCACTGAATCATGTCCACC GACTCCCATCCTCCCGTCTCTTTCCAATCCTCAGGATGCGCGCCCGCGTG ACGGAACTGATGGCCTTTGGCGGCCGCGGCGGCCCAGGGTCCGACCGCGG CCCACTCGTGACCCGCCACATGTCCGGGGTGGTCCGCTTGGCAACGAGTG CCGCCGCCTTCCTGGGCATGCTGGGCATTGAGCTGTTGCAGCAGTGGCCA GACCACTTCACGAAGGACATGGCAGCGCAGCGCCCCGTCGTCCTCGCTGC CAAGCCGCCATTCGAGATGCTCGAGGCGCTCTTCGGAGGCCGTGGCGGCG GCGGCGGCGGCGGCAACAAAAACAGTTGGGGCGGTGATAGCAGCGGCGGT GCTGAAGACTGTGGTGGCAGTGACGGTGGCCGCGGCTGCGTGTCTGCTGA CGCCACCGGCGTCAGGGAAGGCGGCCAGGGCGGCGAGGGTGGCAGAAAGG CAGACACCGGAGGGAATGCCGGCGTCACCTCCGCCGCCGCGCCCACCGCG GGCAGCGGTGCAGGTGATTCGCACCTAAGACGCAGGGACGGCCTCGCCGC AGGCGGTCCGGTGGCTGTAACGGACCCCGGTGCAATGGAAGAGGATGTTG CCAGCAGCCTCGCCGCCGGCAGCGGGCCCGCCGCGGGCGAGACCGCTACC GCCGCTGCCGCTGAGGCTTCTGGCGGCACGTGGGCGAGCGGCATCGCAGT TGCCGCCGTCTCCGCCGGAGAAGGACCAGATGCCCGGGCCAGGACCGCCT TGTCCGTCATGGACGTCAGCCGTCTGGTGCCGCCGGATTCGAACCGGCCC TCCGCGGCGGCGGTGGTGGCGGCGGCCTCGCCGGACTTCGAGTCAGGAGC CGATGAGGCAGCATCGATGAGCTCGGAGGCATGCTCCACGCTGCCCGATG ACGCCCGGCGCGGCTCGCCGAACCCGCCTCCGCCGGCCCGCTTCGAACCC GCTGCGGCTGTTGCCGCCGCTGGCGACGGCGGCGGCTTCGGCGGTCGCGG ATTTGGCGGCATTGGTTTCAGCGGCGGCGGTTTTGGTGGCATAGGATTCG ACCGCAGCGGCGGTGCGCCTGCTGCTGCAGGAACCGTGGCGAGGAGTCCT GGGGGTGGTATCGGCATGCCGCCGACGCAGTCTGCGGCAGAGGCTTCAGC CAAGGCGGCGGCGGTGGCGGCGGCAGCAGCTGTCGGAAATGGCGGCAGCG CCACGGCTGGTGGAAGCAGCAGCGGCAGTGCCGGTGGAAGCCCTTTGGAT GGTCCGGAGATCCCGCTGTTGGTGCCGCTGCGCGGATGGGAGAGCGACGA CGCGCATGCAGTTGTGAAGCAGGCGTTGGGGCCATGGGAGGTGAGAATTG CTTAGTCTTTTCCAGTTAAGAACATTTCGTTACCTGCTCCTTCGACGGTA ACTCTCTTCGAATACCTGGGTAGGACCTTGGCTCCTTGGCTCCTTGCTCC GGGTGCTGCAAATATTGCTTTATTTTCCTTCAAGCTGCTCTGTCCACTCA TTTTCTCTATCGCCCGCAGGACGTGCGCAAATGCACCTTCTGCCACGACG CTAGTGACAGCGCGACCTGCGGGCGGCTGCTGCCGTTCGATGACGGACAG TGGACGCACACGCAGTGTGCGCTGTGGTCGGGTGGCGTCTTCGAGGACCA GCGGGTGGGGATGTGCGGCCGGCTGCGGGGGCTTGCCAAGGCGCGCAGCG CCGGCCGCACCGCCCGCTGCCGGCTGTGCGGGCTGCCGGGGGCGACGCTG CGGTGTGAGGCGCAGCCGCCGGGCCCGCGCGGATACTGCGACGAGAGCTT CCACTTCCCGTGCGCCGTCGAGGCGGGCTGCTTCATGGCCAACACCATGA CGGTGAGGGTGGGCGGTTGCTGCCGTTTGCGGACGCTCGGAGGCAACCAT CGCGAATGCTGGCCTCGCTATGTGAAAATTTTATACATCGTTTGCTTCTT TTGATGCTTTGTTCTCGTTCGGCAGCTTTCCTACTGCCTTTGCTGATCGT ATCGTCGCCCTGCCACGCTTGTAAGTCTATCGATCATCTCGCTCAAGCCC AATTTTCTATCTCCAAAGAAACGGCGCTCCTGCACCATGTCTCTGTCTAC CGATTCTCCGGCAGTTCTTCTGCCGTATGCACCTACCCGTGAAGACCAAT GACGGGATCGTCGCGCTCTCGCGGGAGGAGCTGTCGCGGGAAAAGGCCGC GTCCTTCGACACAGAGACTGTCTTCGGCCGCGGCGCCAATAACCCGCCGC AGCCGTCCTTGGCGGCGGGCAACGTGCTCCGTGCCGGCGCGCTTACTGTG CACCGCCTGGGCGAAGTGGTGGCGGCCAAAGCGGTGGGCGATGGGCCTGG CGGCGGCGGCGGACTGTTCCACACGCGGCAACACATCTTTCCGCGCGGCT TCCGGGCGACGCGCCTCTTCTCGTCCGGCAAGCGGCCGATGCGGCGAACG CTCTACGTGTGCGAGGTGCTGTCAGGCCGAGATGCCGGGTTGACGAACGA CGGCGCCGCAGCGCTGGCGCTGGCGTCGGAGGAGGCGGCGGCGGCCGCGG GGCATCCGGGCGGCCGCCGGCGACGTGCAGCGGCAGCAGCGGCCGCTGCT GGCCTTTCTCGCAGCAGCAGTGACGGCAGCGGGAAAAGGGCCGGCGCTAG GGGCAGCGGGCGGCGGCAATCGTCGCCGATTGCTGAAGTGGCAAGGTCTT CTGGCGGCGGCGGCGGTGGCGGCAGCACGGCTGGTGGCGGTGGCGGCGGG TATGGCATGGGTGGTAAAAAGGGCGGCACCGCCGCCGTGGCGAAGAGCGG CCGCAAGCCGCCGCCGCCGCGAAAGAAGCGCGGTGGGAGAGAGCATGTCC TGTGCGCGGACTGCGGTCAGATGGTTTACCACCTCAATAAGCACGGCTGC CTGGGCATCCTGGCGCAGCCGGCGGACGGCGCGGCGGACGGCACGGCGGA CGGCGTGGTGGACGGCAGCCAGCTTGCTGGTTTTCCGGCGGGGTCGGGTT CCGCATGGGACAGTGCAAGTGTCACCGATGCTGGGACAATCCTCAGCGAC GGCGGGAGCCTCGCAGCGGCGGACGGCGCCGCCGCCATCGGCGTTGACGG CAGTGCTACGGCGCCCGACGGCGACGGTGCTGCGAACGTTGACTGCAGCG CGGCGGGGGTAGGGACGGCGGTGGCGGCGGTGGCAACGACGGTGGCCGTT GAAGGAGGCGCCATGGCGGTCGAAGAAAGCGCAGCGTCGGCTTTCGAAGA TAGCGGCGCTCTGTCACGTCTGAGTAGCGTTACCGTGGACGTTCGGGACG GCAAGCTGGCCGCTGCCACGTCGAGCAGCACGCCGGGCTGCGATGGGGTT GGGGCGGCATCGGATGGAGCTTCCAACATTGGCGGCAGCGGCGGCACCGG CGAAGCTGACGGCGGCGCTCTGACAACCGCTCGAAGCGCTATGGCCGTTG ACTACAGCTCTGGAGAGGCGGGCAGCAGTTCCACAATTGCTGGGGATGGC ACCTTGGTGGCAGAAGGGAGCACTGCTGCAACTGCCGACAGTGCGGCGGC CGAAGGCGGCGCCGCGGCGACTCCTGGCAGCGCGGCGGCCGTAGCGATAG CGGCCGATAGCGCGATGGTGGTGGGCGCCATCTCAACAGCGAACGGCGGT TCTGACGTGGATGGCAGGGGCGCGTCAGCAGCCGATGGAGGCAGCGCTGC GTTAGCCGATGACAACGCCGTGGAGATGATTGACGGTCAGGCGGCGGCTG AAAGCAGTGCTAAGTCGATCGAAGGCGACGCGGCGGCAATGGACTGTGGT GTCCCAACCGTTAATGCCGCGATCGCCGATGGCATTGACCTCATGGTGGA GAGCGAGGCGGCGGCGGCAGATGGCAGCGCGATGGCAACCGACGCTGCCG ATGGCGCTGCCGCCGCCGGCGACGTCGCTGCAGCTGATGCCGACGCAGCC GTTGAAACCACCGAAGCTGACGCCGCCAACGGAGCTGACGGCGACGCTGC CGCGGGCGGTGCGGACGACGCTGCAGCAGCGGCGGTTGCCGGGGACGAAG CCGAACATGGCTACGGAGAAGGAGAAGGCGAGGGCGATGCGACGTGGTAC GACGGGGCAGTGCTGCGTGCCACGCCGATGGACGACGTCGACAACCCCAT CGTGGCCCTGTCGCTCGATGCCGCCTATGACGCGTTGCTGCGGCGCGTTC ACGCCTGCCACGCCAAGTACACGGAGGGCGACCGCCTTTTCCGCTCGCAG CGCAAGGTGCGTTTGCCGGCGCTTTGCTGTTAAGGGTTTTGGTTGATTGC CTCCTTTTGCCAAAAATCTGTTGGAACGTCTGCCAATGTAATGGGAGACA ACGGCACGCCAACATACGGTTTCTCCTGTCTAGGGTTTGTCTGGCTGCCA TCCGCCTTACCCCGGCTTGCTCTCTCGCTCGTTGTTCTCGACAGGCCTTC ACCACCTACGGGCTGAACGGCGCGCAGTTCTTCGGCGTCGGGCTGCCTGC CGTGCGCCGCGCCATCGAAGAGATACCGGATGCCATCGCCGCTGCCATCT CGCCGCCAGATGACCCAGCGCGGCAGTACCGCTTCTCGCTGTACCAGCCG TCGGCGGCGGCCGTCAAGCAGTGGCAGCGACAACGGGCAGCGCAGCGGGC GGCGGTGGACGTTAACCCGAGCGGCTGCGCACGGGCAGAGGGTCACCAGC TAGTTGCGGCCAACAAGGCCGGCCGCATCACGCGGTCCCTCATGCGCTTC GCCCAGGAGCTCAGCGAGCCCGCGGGTGGTGGCGGCGGCGCTGGTGGCGG CGGCGGCGGCACTGGGGGCGGGCTGGCGGCGGCGGCGGCGACGCCGGCGT CTGGTACGGGGGAGGGCGGCAATGCGGCGGTCAAGGCGAAGTACCGGGAG CTGAAGAGCAAGCCGACCGGCAACGGGCTGCTGGTGCGGCGCAGCCACAT CCACGGGTGGGGGCTCTTCGCACAGGACGCGGTGAGGAAAGAGCTGTTTC GCTGTATCCCGTTGGTTTTGTTTGGTAGAGCTCGGCAGGACAATGTACAT TTAAACTGCAAGCCGTTTCTCCGCGTCTCTCTCTCTCACACACACACAAA CACACACTCTCTCACTCTTTCTCTCTTTTCATCGCTAGTACCAATGCTGC TGCCGTTTCTGGGATCACCGGCGCCATTCGCCAATGCCACTTTCTTCCTT ATTCATCATTCCCCACCACTCCTTGCCGCATCGGTCGCCCGTATGTCCTT CTGCTGCCGCGCAGTTCAAGGCGGGGGACTTCATTGTGGAGTACATGGGG GAGCTGATCCGGCAGTGCGTGGCGGACCGCCGGGAGAAGAAGTATGAGGA GATGGGCATCGGCAGCTGCTACCTCTTCCGCATCGACCGTGCCGCCGACA TCCTCGACGCCACCCGCAAGGGCAGCCTCGCGCGCTTCATGAACCACTGC TGCGAGGTGAGAGGAGTGGGGAAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig517:251..9674-

>mRNA_P-wetherbeei_contig517.1.2 ID=mRNA_P-wetherbeei_contig517.1.2|Name=mRNA_P-wetherbeei_contig517.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=5493bp|location=Sequence derived from alignment at P-wetherbeei_contig517:251..9674- (Phaeothamnion wetherbeei SAG_119_79)
GCCCGTGAGGCGCGCGCCTTCCACGCCGCCGCCGAAGCCGTCTTCGCACG
GCAGAAGCATGCGACGCGGCCGTCGCGGCGGCACGCCGAGGCCATAAAGG
AGCGGCTGGCAGCCAAGGCGGCGGAGCGCAAGGCACCGCCGGTGCCGCGG
AAGGACCTGCTTGTTGGGCAGACGGCCGAGGTGAAGCTCGGGCCGTTGGT
GCCGTCACCTGACCCGGACGCCACCGTGGGGCTTCGGCCCGTCGCCCAGT
CGTGGCTGACGGCAGTGGAGGCGCACTTCTGGTGCTGGTCCGAGGCATGC
CTCTACTGCGGCAGCGGCGGCGCCGAGAACGACATGGTCTTCTGCATGGA
CTGCGGGGAGGCCTTCCATGGCTGGTGCGTGAACGTGCCGCTGAAGACGA
TGGACGCGCGGGCGCGTGCGAGCTGGCGGTGTCTGAACTGCAAGGTATGC
GAGGCGTGCCTCACCGTGGCGGCGGCTGACGAGGGCAGCCTCGTCTACTG
CGAGATCTGCGACCGCGCCTACCACCTCAACTGCCTCAAGCCCGCGCCGC
ACGCCGTGCCCGACGGCGCCTGGATCTGCGGCCAGTGCTTCAGCTGCGAA
AGATGCCGGGAGCCGCACCCATTTACGGCGTGGAGCCACTCGGCCAAGGC
TTGCCGCGACTGCCTCCGGGACGCGGCGCGGCGCGACCAACAGGCAGAGC
TTCAGCGGCGCCGCCAGATCCTCCTCCGCGAGAAGCGGCGGCGGCGGGCG
GCGCACGACGCCGCTGCCGCCGCCGAGAAGGCGGTGGCTACCGCCGCATC
CGAGGCGGCGGCGGCGGAGGCGGCGGTGGCGGCGGCGGCGCGGGCAGAAA
GTGCCCGGGCGGTGGCGAAGCGCGCGGTGGCGATGACGCTCAAGCCGGAG
GTGGCGGCGGCCGCCGAATGGGGGGTGAACGTGCCGGCGCTTGTCGGCGC
GCATCGCTGCCCGTCCTGCGAGACCAAGTGGGACGAAACAGACATGCGCA
TGGTGGAGTGCGACAGCTGCGGGCTGTGGGTGCATGCCGCCTGCGATCCG
GACCCACCTGCGCCGACGCCGCCGGCGATGCCGGACTTCGATTTCTTCTG
CGAGGCGTGCCTCGGCGTGCGAGAATTGCAAGCGACGCTCCTGGCGACGG
CTTCGGGCGTGGCGGCCCCGAACGCTGCTGACGCGGAGGGAGCGCCGCCG
CCGGCGGCGGCAGCGGCGGTAAGGGCGCCGCCGCCAACGGGAAACCCGGC
GTTGGAGGCAGCCGCCCTCCGGGCGCCTGCGGCAATCGAAGGGTTCCCCT
TCCCGCCGGCGACCGGAGCAGGTGGCCACGGCAGGGAGCCCGCGCGCAAG
AAGTCTCGGTCGCGAGATGGTGGCGCGGTCGTGGCGGCGGCGGCGGGCGG
CAGGGGTGGCGGCGGGTGGGAGATGGCATCGGATTCCGCGTCTGAGTTTG
GTGAGGGGAGCGTCGCCGGCAGTAGCGCGCGGGAGCTGGCGCAGCGCGTG
CGGTGGATTGAGGAGCGGCGGGCGCGGTTACAGGAGCGGACAGAGGTGGC
GGCGGCCGTGGCGCAGCGAGAGGAGCGCGAGTGGCAGGCGATGGAACCGC
AGCGGGCGCGCTGTGTGCAGGTCATCGGCCGGGCACTGCAGGAGGTGCTG
CGCTTGCAGAAGACGAACTTCGAGCAGGAAGGGTACTGGAAGATGCTGCA
GGCCACAGCGAAGGCGCAGACCAAGGCGCCCCTCTTTCTGCGCTGCCGGG
CAGCGCGTTTCCTGCGGATGCACCGCTTCAAGGGCGGCCACCGGATGCGC
GCCCGCGTGACGGAACTGATGGCCTTTGGCGGCCGCGGCGGCCCAGGGTC
CGACCGCGGCCCACTCGTGACCCGCCACATGTCCGGGGTGGTCCGCTTGG
CAACGAGTGCCGCCGCCTTCCTGGGCATGCTGGGCATTGAGCTGTTGCAG
CAGTGGCCAGACCACTTCACGAAGGACATGGCAGCGCAGCGCCCCGTCGT
CCTCGCTGCCAAGCCGCCATTCGAGATGCTCGAGGCGCTCTTCGGAGGCC
GTGGCGGCGGCGGCGGCGGCGGCAACAAAAACAGTTGGGGCGGTGATAGC
AGCGGCGGTGCTGAAGACTGTGGTGGCAGTGACGGTGGCCGCGGCTGCGT
GTCTGCTGACGCCACCGGCGTCAGGGAAGGCGGCCAGGGCGGCGAGGGTG
GCAGAAAGGCAGACACCGGAGGGAATGCCGGCGTCACCTCCGCCGCCGCG
CCCACCGCGGGCAGCGGTGCAGGTGATTCGCACCTAAGACGCAGGGACGG
CCTCGCCGCAGGCGGTCCGGTGGCTGTAACGGACCCCGGTGCAATGGAAG
AGGATGTTGCCAGCAGCCTCGCCGCCGGCAGCGGGCCCGCCGCGGGCGAG
ACCGCTACCGCCGCTGCCGCTGAGGCTTCTGGCGGCACGTGGGCGAGCGG
CATCGCAGTTGCCGCCGTCTCCGCCGGAGAAGGACCAGATGCCCGGGCCA
GGACCGCCTTGTCCGTCATGGACGTCAGCCGTCTGGTGCCGCCGGATTCG
AACCGGCCCTCCGCGGCGGCGGTGGTGGCGGCGGCCTCGCCGGACTTCGA
GTCAGGAGCCGATGAGGCAGCATCGATGAGCTCGGAGGCATGCTCCACGC
TGCCCGATGACGCCCGGCGCGGCTCGCCGAACCCGCCTCCGCCGGCCCGC
TTCGAACCCGCTGCGGCTGTTGCCGCCGCTGGCGACGGCGGCGGCTTCGG
CGGTCGCGGATTTGGCGGCATTGGTTTCAGCGGCGGCGGTTTTGGTGGCA
TAGGATTCGACCGCAGCGGCGGTGCGCCTGCTGCTGCAGGAACCGTGGCG
AGGAGTCCTGGGGGTGGTATCGGCATGCCGCCGACGCAGTCTGCGGCAGA
GGCTTCAGCCAAGGCGGCGGCGGTGGCGGCGGCAGCAGCTGTCGGAAATG
GCGGCAGCGCCACGGCTGGTGGAAGCAGCAGCGGCAGTGCCGGTGGAAGC
CCTTTGGATGGTCCGGAGATCCCGCTGTTGGTGCCGCTGCGCGGATGGGA
GAGCGACGACGCGCATGCAGTTGTGAAGCAGGCGTTGGGGCCATGGGAGG
ACGTGCGCAAATGCACCTTCTGCCACGACGCTAGTGACAGCGCGACCTGC
GGGCGGCTGCTGCCGTTCGATGACGGACAGTGGACGCACACGCAGTGTGC
GCTGTGGTCGGGTGGCGTCTTCGAGGACCAGCGGGTGGGGATGTGCGGCC
GGCTGCGGGGGCTTGCCAAGGCGCGCAGCGCCGGCCGCACCGCCCGCTGC
CGGCTGTGCGGGCTGCCGGGGGCGACGCTGCGGTGTGAGGCGCAGCCGCC
GGGCCCGCGCGGATACTGCGACGAGAGCTTCCACTTCCCGTGCGCCGTCG
AGGCGGGCTGCTTCATGGCCAACACCATGACGGCGGCGGCGGCCGCGGGG
CATCCGGGCGGCCGCCGGCGACGTGCAGCGGCAGCAGCGGCCGCTGCTGG
CCTTTCTCGCAGCAGCAGTGACGGCAGCGGGAAAAGGGCCGGCGCTAGGG
GCAGCGGGCGGCGGCAATCGTCGCCGATTGCTGAAGTGGCAAGGTCTTCT
GGCGGCGGCGGCGGTGGCGGCAGCACGGCTGGTGGCGGTGGCGGCGGCCA
GCTTGCTGGTTTTCCGGCGGGGTCGGGTTCCGCATGGGACAGTGCAAGTG
TCACCGATGCTGGGACAATCCTCAGCGACGGCGGGAGCCTCGCAGCGGCG
GACGGCGCCGCCGCCATCGGCGTTGACGGCAGTGCTACGGCGCCCGACGG
CGACGGTGCTGCGAACGTTGACTGCAGCGCGGCGGGGGTAGGGACGGCGG
TGGCGGCGGTGGCAACGACGGTGGCCGTTGAAGGAGGCGCCATGGCGGTC
GAAGAAAGCGCAGCGTCGGCTTTCGAAGATAGCGGCGCTCTGTCACGTCT
GAGTAGCGTTACCGTGGACGTTCGGGACGGCAAGCTGGCCGCTGCCACGT
CGAGCAGCACGCCGGGCTGCGATGGGGTTGGGGCGGCATCGGATGGAGCT
TCCAACATTGGCGGCAGCGGCGGCACCGGCGAAGCTGACGGCGGCGCTCT
GACAACCGCTCGAAGCGCTATGGCCGTTGACTACAGCTCTGGAGAGGCGG
GCAGCAGTTCCACAATTGCTGGGGATGGCACCTTGGTGGCAGAAGGGAGC
ACTGCTGCAACTGCCGACAGTGCGGCGGCCGAAGGCGGCGCCGCGGCGAC
TCCTGGCAGCGCGGCGGCCGTAGCGATAGCGGCCGATAGCGCGATGGTGG
TGGGCGCCATCTCAACAGCGAACGGCGGTTCTGACGTGGATGGCAGGGGC
GCGTCAGCAGCCGATGGAGGCAGCGCTGCGTTAGCCGATGACAACGCCGT
GGAGATGATTGACGGTCAGGCGGCGGCTGAAAGCAGTGCTAAGTCGATCG
AAGGCGACGCGGCGGCAATGGACTCTGACGGCGACGCTGCCGCGGGCGGT
GCGGACGACGCTGCAGCAGCGGCGGTTGCCGGGGACGAAGCCGAACATGG
CTACGGAGAAGGAGAAGGCGAGGGCGATGCGACGTGGTACGACGGGGCAG
TGCTGCGTGCCACGCCGATGGACGACGTCGACAACCCCATCGTGGCCCTG
TCGCTCGATGCCGCCTATGACGCGTTGCTGCGGCGCGTTCACGCCTGCCA
CGCCAAGTACACGGAGGGCGACCGCCTTTTCCGCTCGCAGCGCAAGGCCT
TCACCACCTACGGGCTGAACGGCGCGCAGTTCTTCGGCGTCGGGCTGCCT
GCCGTGCGCCGCGCCATCGAAGAGATACCGGATGCCATCGCCGCTGCCAT
CTCGCCGCCAGATGACCCAGCGCGGCAGTACCGCTTCTCGCTGTACCAGC
CGTCGGCGGCGGCCGTCAAGCAGTGGCAGCGACAACGGGCAGCGCAGCGG
GCGGCGGTGGACGTTAACCCGAGCGGCTGCGCACGGGCAGAGGGTCACCA
GCTAGTTGCGGCCAACAAGGCCGGCCGCATCACGCGGTCCCTCATGCGCT
TCGCCCAGGAGCTCAGCGAGCCCGCGGGTGGTGGCGGCGGCGCTGGTGGC
GGCGGCGGCGGCACTGGGGGCGGGCTGGCGGCGGCGGCGGCGACGCCGGC
GTCTGGTACGGGGGAGGGCGGCAATGCGGCGGTCAAGGCGAAGTACCGGG
AGCTGAAGAGCAAGCCGACCGGCAACGGGCTGCTGGTGCGGCGCAGCCAC
ATCCACGGGTGGGGGCTCTTCGCACAGGACGCGTTCAAGGCGGGGGACTT
CATTGTGGAGTACATGGGGGAGCTGATCCGGCAGTGCGTGGCGGACCGCC
GGGAGAAGAAGTATGAGGAGATGGGCATCGGCAGCTGCTACCTCTTCCGC
ATCGACCGTGCCGCCGACATCCTCGACGCCACCCGCAAGGGCAGCCTCGC
GCGCTTCATGAACCACTGCTGCGAGGTGAGAGGAGTGGGGAAG
back to top