mRNA_P-wetherbeei_contig51640.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig51640.1.1 vs. uniprot
Match: A0A7C4XKQ8_9HYPH (Chromate transporter n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XKQ8_9HYPH) HSP 1 Score: 135 bits (339), Expect = 6.000e-38 Identity = 61/102 (59.80%), Postives = 84/102 (82.35%), Query Frame = 1
Query: 7 EVPLATIFWIFFQIGALSIGGGLTAWLYREIVDKRRLMSGADFIGALTLAQVLPGINMTNLSVYVGQRLRGVEGALVAMFGLLLVPFFAIIAIGSVYAQLKS 312
+ L+ IF +FF IG+LS GGGL AW+YRE+V++RR ++ A+F+G LTLAQVLPGINM N++VY+GQR+RG+ GA+ + GLLLVPFFA+I + S+YAQL +
Sbjct: 17 RISLSEIFLLFFHIGSLSFGGGLIAWVYREVVERRRWLTQAEFLGGLTLAQVLPGINMANMAVYIGQRMRGIGGAVAGLVGLLLVPFFAVIGLVSIYAQLGT 118
BLAST of mRNA_P-wetherbeei_contig51640.1.1 vs. uniprot
Match: A0A1G5AT60_9HYPH (Chromate transporter n=1 Tax=Microvirga guangxiensis TaxID=549386 RepID=A0A1G5AT60_9HYPH) HSP 1 Score: 124 bits (312), Expect = 5.520e-34 Identity = 57/106 (53.77%), Postives = 78/106 (73.58%), Query Frame = 1
Query: 1 PPEVPLATIFWIFFQIGALSIGGGLTAWLYREIVDKRRLMSGADFIGALTLAQVLPGINMTNLSVYVGQRLRGVEGALVAMFGLLLVPFFAIIAIGSVYAQLKSYP 318
P VPL ++F++FF++G S GGGL W++RE+V +R MS DF L L+Q+LPG N+TNLSVY+GQRLRG GA A+ GL++ PFFA+IA+ + YAQL + P
Sbjct: 5 PGPVPLLSLFFVFFRVGLFSFGGGLAGWVHREVVAQRGWMSDDDFFSGLALSQILPGANVTNLSVYIGQRLRGPAGAACALVGLVIGPFFAVIALATAYAQLATMP 110
BLAST of mRNA_P-wetherbeei_contig51640.1.1 vs. uniprot
Match: UPI001922F666 (chromate transporter n=1 Tax=Microvirga aerilata TaxID=670292 RepID=UPI001922F666) HSP 1 Score: 124 bits (310), Expect = 1.110e-33 Identity = 56/104 (53.85%), Postives = 78/104 (75.00%), Query Frame = 1
Query: 7 EVPLATIFWIFFQIGALSIGGGLTAWLYREIVDKRRLMSGADFIGALTLAQVLPGINMTNLSVYVGQRLRGVEGALVAMFGLLLVPFFAIIAIGSVYAQLKSYP 318
VPLA++F +FF++G S GGGL+ W+YRE+V R M+ DF L L+Q+LPG N+TNLSVY+GQRLRG GA+ A+ GL++ PFFA+IA+ + YAQ+ + P
Sbjct: 7 HVPLASLFLVFFRVGLFSFGGGLSGWIYREVVTLRGWMNDDDFFSGLALSQILPGANVTNLSVYIGQRLRGPVGAVCALTGLVIGPFFAVIALATAYAQIATMP 110
BLAST of mRNA_P-wetherbeei_contig51640.1.1 vs. uniprot
Match: A0A5N7MXG4_9HYPH (Chromate transporter n=6 Tax=Microvirga TaxID=186650 RepID=A0A5N7MXG4_9HYPH) HSP 1 Score: 120 bits (301), Expect = 2.540e-32 Identity = 56/108 (51.85%), Postives = 78/108 (72.22%), Query Frame = 1
Query: 1 PPEVP--LATIFWIFFQIGALSIGGGLTAWLYREIVDKRRLMSGADFIGALTLAQVLPGINMTNLSVYVGQRLRGVEGALVAMFGLLLVPFFAIIAIGSVYAQLKSYP 318
P + P L ++F +FF++G S GGGL+ W+YRE+V R MS DF L L+Q+LPG N+TNLSVY+GQRLRG G++ A+ GL++ PFFA+IA+ + YAQL + P
Sbjct: 3 PTQAPVSLVSLFLVFFRVGLFSFGGGLSGWIYREVVTLRGWMSDEDFFSGLALSQILPGANVTNLSVYIGQRLRGPAGSICALIGLVIGPFFAVIALVTAYAQLAAMP 110
BLAST of mRNA_P-wetherbeei_contig51640.1.1 vs. uniprot
Match: A0A7C9KBC5_9PROT (Chromate transporter n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7C9KBC5_9PROT) HSP 1 Score: 118 bits (296), Expect = 1.750e-31 Identity = 55/104 (52.88%), Postives = 75/104 (72.12%), Query Frame = 1
Query: 1 PPEVPLATIFWIFFQIGALSIGGGLTAWLYREIVDKRRLMSGADFIGALTLAQVLPGINMTNLSVYVGQRLRGVEGALVAMFGLLLVPFFAIIAIGSVYAQLKS 312
P V L IF +F QIG S GGG+ WLYRE+V+KR + DF+G LT+AQV+PGIN+TN++VY+GQRLRGV G+ VA+ G+L PFF +I + +Y Q++
Sbjct: 11 PLRVSLVAIFSLFLQIGLFSFGGGVLGWLYREVVEKRGWLRDTDFLGGLTVAQVMPGINVTNMAVYIGQRLRGVIGSTVAVVGVLTGPFFFVIGLLMIYGQIQQ 114
BLAST of mRNA_P-wetherbeei_contig51640.1.1 vs. uniprot
Match: UPI00191F5ED9 (chromate transporter n=1 Tax=Microvirga zambiensis TaxID=1402137 RepID=UPI00191F5ED9) HSP 1 Score: 117 bits (294), Expect = 2.910e-31 Identity = 55/103 (53.40%), Postives = 76/103 (73.79%), Query Frame = 1
Query: 10 VPLATIFWIFFQIGALSIGGGLTAWLYREIVDKRRLMSGADFIGALTLAQVLPGINMTNLSVYVGQRLRGVEGALVAMFGLLLVPFFAIIAIGSVYAQLKSYP 318
V L ++F +FF++G S GGGL+ W+YRE+V R +S DF L L+Q+LPG N+TNL+VY+GQRLRG GA+ A+ GL++ PFFA+IA+ S YAQL + P
Sbjct: 8 VSLMSLFLVFFRVGLFSFGGGLSGWIYREVVTLRGWISDEDFFSGLALSQILPGANVTNLTVYIGQRLRGPVGAVSALVGLVIGPFFAVIAMVSAYAQLAAMP 110
BLAST of mRNA_P-wetherbeei_contig51640.1.1 vs. uniprot
Match: UPI001CCC9217 (chromate transporter n=1 Tax=Microvirga sp. WGZ8 TaxID=2876078 RepID=UPI001CCC9217) HSP 1 Score: 117 bits (293), Expect = 4.110e-31 Identity = 54/100 (54.00%), Postives = 74/100 (74.00%), Query Frame = 1
Query: 7 EVPLATIFWIFFQIGALSIGGGLTAWLYREIVDKRRLMSGADFIGALTLAQVLPGINMTNLSVYVGQRLRGVEGALVAMFGLLLVPFFAIIAIGSVYAQL 306
VPL +IF +FF+IG S GGGL+ W+YR++V R MS ADF+ L L Q+LPG N+TNLS+Y+GQ+LRG GAL A+ GLL+ PFFA+I + + Y ++
Sbjct: 7 SVPLLSIFLVFFRIGLFSFGGGLSGWIYRDVVTVRGWMSDADFLSGLALGQILPGANVTNLSIYIGQQLRGSTGALCALLGLLVGPFFAVIGLVTAYDRI 106
BLAST of mRNA_P-wetherbeei_contig51640.1.1 vs. uniprot
Match: UPI001D09CFA6 (chromate transporter n=1 Tax=Microvirga rosea TaxID=2715425 RepID=UPI001D09CFA6) HSP 1 Score: 116 bits (291), Expect = 8.250e-31 Identity = 56/103 (54.37%), Postives = 71/103 (68.93%), Query Frame = 1
Query: 10 VPLATIFWIFFQIGALSIGGGLTAWLYREIVDKRRLMSGADFIGALTLAQVLPGINMTNLSVYVGQRLRGVEGALVAMFGLLLVPFFAIIAIGSVYAQLKSYP 318
VPL IF +FF+IG S GGGL+ W+YRE+V R MS +DF+ L L QVLPG N+TNLSVY+GQ+LRG GA A+ GLL PFFA+I + Y ++ P
Sbjct: 8 VPLLAIFLVFFRIGLFSFGGGLSGWIYREVVTLRGWMSDSDFLSGLALGQVLPGANVTNLSVYIGQQLRGPAGAFCAVLGLLTGPFFAVIGLAVAYDRVVDMP 110
BLAST of mRNA_P-wetherbeei_contig51640.1.1 vs. uniprot
Match: I4YXR8_9HYPH (Chromate transport protein ChrA n=1 Tax=Microvirga lotononidis TaxID=864069 RepID=I4YXR8_9HYPH) HSP 1 Score: 115 bits (287), Expect = 3.310e-30 Identity = 54/103 (52.43%), Postives = 74/103 (71.84%), Query Frame = 1
Query: 10 VPLATIFWIFFQIGALSIGGGLTAWLYREIVDKRRLMSGADFIGALTLAQVLPGINMTNLSVYVGQRLRGVEGALVAMFGLLLVPFFAIIAIGSVYAQLKSYP 318
V L +IF +FF+IG S GGGL+ W+YR++V R MS ADF+ L L+Q+LPG N+TNLSVY+GQRLRG G++ A+ GL++ PFFA++ I Y L + P
Sbjct: 8 VSLVSIFLVFFRIGLFSFGGGLSGWIYRDVVTVRGWMSDADFLSGLALSQILPGANVTNLSVYIGQRLRGPAGSICAVSGLVIGPFFAVLGILGAYDLLSTMP 110
BLAST of mRNA_P-wetherbeei_contig51640.1.1 vs. uniprot
Match: UPI001951A52F (chromate transporter n=1 Tax=Microvirga pudoricolor TaxID=2778729 RepID=UPI001951A52F) HSP 1 Score: 115 bits (287), Expect = 3.310e-30 Identity = 54/105 (51.43%), Postives = 74/105 (70.48%), Query Frame = 1
Query: 4 PEVPLATIFWIFFQIGALSIGGGLTAWLYREIVDKRRLMSGADFIGALTLAQVLPGINMTNLSVYVGQRLRGVEGALVAMFGLLLVPFFAIIAIGSVYAQLKSYP 318
P VPL +I IFF+IG S GGGL+ W+YR++V R M+ ADF+ L L+Q+LPG N+TNL+VY+GQRLRG GA+ A+ L+ PFFA+I + Y +L + P
Sbjct: 6 PSVPLVSIILIFFRIGLFSFGGGLSGWIYRDVVTLRGWMTDADFLSGLALSQILPGANVTNLAVYIGQRLRGPAGAICAVTALVAGPFFAVIGLLVAYDRLSTMP 110 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51640.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig51640.1.1 >prot_P-wetherbeei_contig51640.1.1 ID=prot_P-wetherbeei_contig51640.1.1|Name=mRNA_P-wetherbeei_contig51640.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=106bp PPEVPLATIFWIFFQIGALSIGGGLTAWLYREIVDKRRLMSGADFIGALTback to top mRNA from alignment at P-wetherbeei_contig51640:235..552+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig51640.1.1 ID=mRNA_P-wetherbeei_contig51640.1.1|Name=mRNA_P-wetherbeei_contig51640.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=318bp|location=Sequence derived from alignment at P-wetherbeei_contig51640:235..552+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig51640:235..552+ >mRNA_P-wetherbeei_contig51640.1.1 ID=mRNA_P-wetherbeei_contig51640.1.1|Name=mRNA_P-wetherbeei_contig51640.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=318bp|location=Sequence derived from alignment at P-wetherbeei_contig51640:235..552+ (Phaeothamnion wetherbeei SAG_119_79)back to top |