mRNA_P-wetherbeei_contig51607.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig51607.1.1
Unique NamemRNA_P-wetherbeei_contig51607.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig51607.1.1 vs. uniprot
Match: A0A7Y1T4E8_SPHSX (TIR domain-containing protein n=1 Tax=Sphingomonas sp. TaxID=28214 RepID=A0A7Y1T4E8_SPHSX)

HSP 1 Score: 102 bits (254), Expect = 2.150e-23
Identity = 46/115 (40.00%), Postives = 71/115 (61.74%), Query Frame = 1
Query:    1 QEHKCLIRRIEEALKELDISVWRDTRLLSGQEFQSEINNAIRESKVILVCWSPDSVKSDWVRAEASFGQNAKKLVPATIRTVEIPVPFNLIQSTQFMNWNGSLAAPEWQGIVQSL 345
            +E + + +R+ + L+    SVW D  L SG+ F   I + +R SK ++V WSP SV S WVRAEA+ G   KKL+PA I + E+P+ F L  ++    W+G+L+ P+W G+V  +
Sbjct:   12 REDRAVAQRVSQGLEREGFSVWWDAELHSGETFDEMIEHNLRRSKAVIVLWSPRSVGSRWVRAEATQGDRRKKLLPAVIESCELPIAFELHHTSDLSKWDGNLSNPDWLGLVTDI 126          
BLAST of mRNA_P-wetherbeei_contig51607.1.1 vs. uniprot
Match: UPI00145CAC35 (toll/interleukin-1 receptor domain-containing protein n=1 Tax=Candidatus Competibacter phosphatis TaxID=221280 RepID=UPI00145CAC35)

HSP 1 Score: 92.0 bits (227), Expect = 1.870e-20
Identity = 47/122 (38.52%), Postives = 66/122 (54.10%), Query Frame = 1
Query:    1 QEHKCLIRRIEEALKELDISVWRDTRLLSGQEFQSEINNAIRESKVILVCWSPDSVKSDWVRAEASFGQNAKKLVPATIRTVEIPVPFNLIQSTQFMNWNGSLAAPEWQGIVQSLGGKLNRP 366
            +E +   R I EAL +  + VW D  LL GQ F  EIN  I ++K  +V W+P S+ S WV AEA+       LVPA I  VE+PVPFN + +     WN +   P  +G++  +   + RP
Sbjct:   10 REDRQKARAIAEALAKTGLDVWWDIELLPGQRFADEINAVIDQAKAAVVLWTPKSIASHWVIAEAAHALKRDILVPAWIEHVELPVPFNTLHTLDLTKWNSTPTDPLLEGLIAGIQRLVGRP 131          
BLAST of mRNA_P-wetherbeei_contig51607.1.1 vs. uniprot
Match: A0A8G1NTF9_9SPHN (TIR domain-containing protein n=1 Tax=Qipengyuania psychrotolerans TaxID=2867238 RepID=A0A8G1NTF9_9SPHN)

HSP 1 Score: 95.9 bits (237), Expect = 5.700e-20
Identity = 46/121 (38.02%), Postives = 68/121 (56.20%), Query Frame = 1
Query:    1 QEHKCLIRRIEEALKELDISVWRDTRLLSGQEFQSEINNAIRESKVILVCWSPDSVKSDWVRAEASFGQNAKKLVPATIRTVEIPVPFNLIQSTQFMNWNGSLAAPEWQGIVQSLGGKLNR 363
            +E + +  +  E+  +  +SVW DT L SG+ +      A+RE+K ++V WSP SV S WVRAEA+     K L+P TI   + PV F L Q+     WNG L+ P W+ +V+ +   L R
Sbjct:   13 REDEAVALQFSESFGKEGLSVWWDTELRSGENYDIVTEAALREAKAVVVLWSPRSVGSRWVRAEATIADRRKTLIPVTIEPCDRPVIFELTQTADLSGWNGDLSHPSWRSLVEEIREFLGR 133          
BLAST of mRNA_P-wetherbeei_contig51607.1.1 vs. uniprot
Match: A0A350ZN05_9PROT (TIR domain-containing protein (Fragment) n=1 Tax=Hyphomonas sp. TaxID=87 RepID=A0A350ZN05_9PROT)

HSP 1 Score: 91.7 bits (226), Expect = 7.410e-20
Identity = 45/107 (42.06%), Postives = 60/107 (56.07%), Query Frame = 1
Query:   28 IEEALKELDISVWRDTRLLSGQEFQSEINNAIRESKVILVCWSPDSVKSDWVRAEASFGQNAKKLVPATIRTVEIPVPFNLIQSTQFMNWNGSLAAPEWQGIVQSLG 348
            I EAL+    SVW D  L +GQ +       +R++ V++V WS  SVKS WVRAEA+ GQ    LVPA I   E P+ F L QS   + W+G  + P W+  V  +G
Sbjct:   19 IAEALQAEGFSVWWDKVLRAGQTYDEVTEGMLRDADVVIVLWSAVSVKSKWVRAEATLGQRTSVLVPAMIEDAERPIMFELTQSADLIGWDGDRSDPRWKEFVADVG 125          
BLAST of mRNA_P-wetherbeei_contig51607.1.1 vs. uniprot
Match: A0A7D4BI18_9SPHN (TIR domain-containing protein n=1 Tax=Erythrobacter mangrovi TaxID=2739433 RepID=A0A7D4BI18_9SPHN)

HSP 1 Score: 92.0 bits (227), Expect = 1.350e-18
Identity = 46/117 (39.32%), Postives = 63/117 (53.85%), Query Frame = 1
Query:   16 LIRRIEEALKELDISVWRDTRLLSGQEFQSEINNAIRESKVILVCWSPDSVKSDWVRAEASFGQNAKKLVPATIRTVEIPVPFNLIQSTQFMNWNGSLAAPEWQGIVQSLGGKLNRP 366
            + RR  E L+    +VW D  L SG+ +      A++ +K ++V WSP SV S WVRAEA+     K LVPA I   E PV F L Q+ +  +WNG    P W   VQ +   ++RP
Sbjct:    1 MARRFAEGLEREGFTVWWDQALRSGEAYDEVTEAALKAAKAVVVLWSPRSVVSRWVRAEATIADRKKTLVPAMIEPCERPVMFELTQTAELGHWNGEANDPAWLAFVQDVAKFISRP 117          
BLAST of mRNA_P-wetherbeei_contig51607.1.1 vs. uniprot
Match: UPI001AFE857A (TIR domain-containing protein n=2 Tax=Novosphingobium sp. TaxID=1874826 RepID=UPI001AFE857A)

HSP 1 Score: 90.1 bits (222), Expect = 2.760e-18
Identity = 43/115 (37.39%), Postives = 61/115 (53.04%), Query Frame = 1
Query:    1 QEHKCLIRRIEEALKELDISVWRDTRLLSGQEFQSEINNAIRESKVILVCWSPDSVKSDWVRAEASFGQNAKKLVPATIRTVEIPVPFNLIQSTQFMNWNGSLAAPEWQGIVQSL 345
            +E + + RR  EA  +  ++VW D  L SG+ F   I   +R SK ++V WSP SV S WVRAEA+     + L PA I     P+ F L  +    NW G +A P W+  V+ +
Sbjct:   20 REDEGMARRFAEAFAQEGLTVWWDAALHSGETFDEVIEQELRASKAVVVLWSPHSVASRWVRAEATLADRNRTLAPAVIAPCNRPIIFELTHTADLSNWKGDVADPAWKSFVKDI 134          
BLAST of mRNA_P-wetherbeei_contig51607.1.1 vs. uniprot
Match: UPI0008D99537 (SUMF1/EgtB/PvdO family nonheme iron enzyme n=1 Tax=Hyphomonas sp. Mor2 TaxID=1906738 RepID=UPI0008D99537)

HSP 1 Score: 90.9 bits (224), Expect = 2.980e-18
Identity = 45/116 (38.79%), Postives = 63/116 (54.31%), Query Frame = 1
Query:   28 IEEALKELDISVWRDTRLLSGQEFQSEINNAIRESKVILVCWSPDSVKSDWVRAEASFGQNAKKLVPATIRTVEIPVPFNLIQSTQFMNWNGSLAAPEWQGIVQSLGGKLNRPGLA 375
            I EAL+    SVW D  L +GQ +     N +R+S V++V WS  SVKS WVRAEA+ GQ + ++VPA I   + P+ F L Q+   + WNG  +   W   V  +   L +   A
Sbjct:   19 IAEALEAEGFSVWWDKVLRAGQTYDEVTENMLRDSAVVIVLWSQTSVKSKWVRAEATLGQRSCEMVPAMIEDADRPIMFELTQTADLIGWNGDRSEARWTEFVADIKRSLEKHSAA 134          
BLAST of mRNA_P-wetherbeei_contig51607.1.1 vs. uniprot
Match: A0A4Q5Y0R4_9PROT (TIR domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A4Q5Y0R4_9PROT)

HSP 1 Score: 90.9 bits (224), Expect = 3.030e-18
Identity = 44/114 (38.60%), Postives = 64/114 (56.14%), Query Frame = 1
Query:   16 LIRRIEEALKELDISVWRDTRLLSGQEFQSEINNAIRESKVILVCWSPDSVKSDWVRAEASFGQNAKKLVPATIRTVEIPVPFNLIQSTQFMNWNGSLAAPEWQGIVQSLGGKL 357
            + +RI + L    I+VW D  L +G+ +       +R +K ++V WS  SVKS WVRAEA+ GQ    LVPA I   + PV F LIQ+T    W+G  A P W+ +V  +  ++
Sbjct:   24 IAQRIVDGLVAEGINVWLDMELKAGENYDEITEEGLRSAKAVVVLWSSRSVKSRWVRAEATIGQRKSTLVPAMIEECDRPVMFELIQTTDLSKWDGDRADPNWRKLVSVIRDRI 137          
BLAST of mRNA_P-wetherbeei_contig51607.1.1 vs. uniprot
Match: UPI001C871A6A (TIR domain-containing protein n=1 Tax=Qipengyuania xiamenensis TaxID=2867237 RepID=UPI001C871A6A)

HSP 1 Score: 90.1 bits (222), Expect = 6.350e-18
Identity = 40/115 (34.78%), Postives = 63/115 (54.78%), Query Frame = 1
Query:    1 QEHKCLIRRIEEALKELDISVWRDTRLLSGQEFQSEINNAIRESKVILVCWSPDSVKSDWVRAEASFGQNAKKLVPATIRTVEIPVPFNLIQSTQFMNWNGSLAAPEWQGIVQSL 345
            +E + + R   +  +   + VW DT L +G+ +      A+R +K ++V WSP SV S WVRAEA+  + AK  +P TI   E P+ F L Q+    +W G  + P+WQ  V+ +
Sbjct:   10 REDQAIARHFADGFENAGLKVWWDTTLRTGEAYDEVTEAALRGAKAVVVLWSPRSVVSRWVRAEATLAERAKTFLPVTIEPCERPIMFELTQTADLTHWKGDPSDPDWQAFVEEV 124          
BLAST of mRNA_P-wetherbeei_contig51607.1.1 vs. uniprot
Match: A0A6I4SYD4_9SPHN (TIR domain-containing protein n=2 Tax=Croceibacterium salegens TaxID=1737568 RepID=A0A6I4SYD4_9SPHN)

HSP 1 Score: 90.1 bits (222), Expect = 6.350e-18
Identity = 43/112 (38.39%), Postives = 62/112 (55.36%), Query Frame = 1
Query:   34 EALKELDISVWRDTRLLSGQEFQSEINNAIRESKVILVCWSPDSVKSDWVRAEASFGQNAKKLVPATIRTVEIPVPFNLIQSTQFMNWNGSLAAPEWQGIVQSLGGKLNRPG 369
            +AL     SVW D  L SG+ + +    A+ ES+ ++V WSP+S+ S WVRAEA+    A KLVPA I   + P+ F L Q+ +  +WNG  +   WQ  V  L   + + G
Sbjct:   23 DALAAEGFSVWWDATLRSGETYDTVTERALEESRAVVVLWSPNSINSRWVRAEATEADRAHKLVPAMIAPCKRPIMFELTQTAELSHWNGDRSDAVWQAFVSDLRRHIGKSG 134          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51607.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y1T4E8_SPHSX2.150e-2340.00TIR domain-containing protein n=1 Tax=Sphingomonas... [more]
UPI00145CAC351.870e-2038.52toll/interleukin-1 receptor domain-containing prot... [more]
A0A8G1NTF9_9SPHN5.700e-2038.02TIR domain-containing protein n=1 Tax=Qipengyuania... [more]
A0A350ZN05_9PROT7.410e-2042.06TIR domain-containing protein (Fragment) n=1 Tax=H... [more]
A0A7D4BI18_9SPHN1.350e-1839.32TIR domain-containing protein n=1 Tax=Erythrobacte... [more]
UPI001AFE857A2.760e-1837.39TIR domain-containing protein n=2 Tax=Novosphingob... [more]
UPI0008D995372.980e-1838.79SUMF1/EgtB/PvdO family nonheme iron enzyme n=1 Tax... [more]
A0A4Q5Y0R4_9PROT3.030e-1838.60TIR domain-containing protein n=1 Tax=Alphaproteob... [more]
UPI001C871A6A6.350e-1834.78TIR domain-containing protein n=1 Tax=Qipengyuania... [more]
A0A6I4SYD4_9SPHN6.350e-1838.39TIR domain-containing protein n=2 Tax=Croceibacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig51607contigP-wetherbeei_contig51607:48..545 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1280950.HJO_16827
PFAMsFGE-sulfatase,Guanylate_cyc,TIR_2
Model size498
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.69e-18
EggNOG OGsCOG0457@1|root,COG1262@1|root,COG0457@2|Bacteria,COG1262@2|Bacteria,1NQ5K@1224|Proteobacteria,2U2VJ@28211|Alphaproteobacteria,43ZFH@69657|Hyphomonadaceae
DescriptionSulfatase-modifying factor enzyme 1
Cds size498
COG categoryM
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186775.2358766-CDS-P-wetherbeei_contig51607:47..5451683186775.2358766-CDS-P-wetherbeei_contig51607:47..545Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig51607 48..545 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig51607.1.1prot_P-wetherbeei_contig51607.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig51607 48..545 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig51607.1.1

>prot_P-wetherbeei_contig51607.1.1 ID=prot_P-wetherbeei_contig51607.1.1|Name=mRNA_P-wetherbeei_contig51607.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp
QEHKCLIRRIEEALKELDISVWRDTRLLSGQEFQSEINNAIRESKVILVC
WSPDSVKSDWVRAEASFGQNAKKLVPATIRTVEIPVPFNLIQSTQFMNWN
GSLAAPEWQGIVQSLGGKLNRPGLAEYCALFEKATYDQLRTWLTQYKTDP
LVEKVLKRASDLHMQE
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mRNA from alignment at P-wetherbeei_contig51607:48..545+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig51607.1.1 ID=mRNA_P-wetherbeei_contig51607.1.1|Name=mRNA_P-wetherbeei_contig51607.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig51607:48..545+ (Phaeothamnion wetherbeei SAG_119_79)
CAAGAGCACAAATGTTTGATCCGCCGTATCGAGGAAGCGCTCAAAGAATT GGATATCAGTGTTTGGCGCGACACACGGCTTTTGTCCGGACAGGAATTTC AAAGCGAGATCAATAACGCCATTCGCGAAAGCAAAGTGATCCTGGTTTGC TGGAGCCCGGACTCGGTCAAGTCCGATTGGGTTCGCGCCGAAGCGTCGTT TGGTCAAAACGCGAAAAAGCTGGTGCCCGCCACCATTCGCACCGTTGAGA TTCCGGTCCCCTTCAACCTGATCCAGTCCACGCAGTTCATGAATTGGAAC GGGTCGTTGGCGGCGCCCGAATGGCAGGGGATTGTCCAATCGCTGGGCGG CAAATTGAATCGCCCGGGATTGGCCGAGTATTGCGCCCTTTTCGAAAAGG CCACATACGACCAGCTGCGCACATGGCTCACCCAGTACAAAACCGATCCA CTCGTCGAAAAAGTGCTCAAGCGAGCGAGCGACCTTCACATGCAGGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig51607:48..545+

>mRNA_P-wetherbeei_contig51607.1.1 ID=mRNA_P-wetherbeei_contig51607.1.1|Name=mRNA_P-wetherbeei_contig51607.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig51607:48..545+ (Phaeothamnion wetherbeei SAG_119_79)
CAAGAGCACAAATGTTTGATCCGCCGTATCGAGGAAGCGCTCAAAGAATT
GGATATCAGTGTTTGGCGCGACACACGGCTTTTGTCCGGACAGGAATTTC
AAAGCGAGATCAATAACGCCATTCGCGAAAGCAAAGTGATCCTGGTTTGC
TGGAGCCCGGACTCGGTCAAGTCCGATTGGGTTCGCGCCGAAGCGTCGTT
TGGTCAAAACGCGAAAAAGCTGGTGCCCGCCACCATTCGCACCGTTGAGA
TTCCGGTCCCCTTCAACCTGATCCAGTCCACGCAGTTCATGAATTGGAAC
GGGTCGTTGGCGGCGCCCGAATGGCAGGGGATTGTCCAATCGCTGGGCGG
CAAATTGAATCGCCCGGGATTGGCCGAGTATTGCGCCCTTTTCGAAAAGG
CCACATACGACCAGCTGCGCACATGGCTCACCCAGTACAAAACCGATCCA
CTCGTCGAAAAAGTGCTCAAGCGAGCGAGCGACCTTCACATGCAGGAG
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