mRNA_P-wetherbeei_contig515.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig515.1.1
Unique NamemRNA_P-wetherbeei_contig515.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig515.1.1 vs. uniprot
Match: A0A353LNG0_9PROT (Heat-inducible transcription repressor HrcA n=5 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LNG0_9PROT)

HSP 1 Score: 327 bits (839), Expect = 2.770e-109
Identity = 167/249 (67.07%), Postives = 207/249 (83.13%), Query Frame = 1
Query:    1 MITELNERSRQIFRALVEAYLAEGIPVGSKSIAAQLPTLLSSATVRNVMKDLEDMGLLYAPHTSAGRIPTQTGLRMFVDALLEIGNVTEKEAREIEAMASSHGAKMEDVLADATSRLSGLARCAGLVLSPKHEPPLKHIEFVNIGPGQALTVIVGQDGHVENRLITVPLGMTAGALQQASNYLNARLLGRTLEEARRQILVELESKRLELDELSAKVVEAGLAVWGGGHNRSAGASLIVRGHSNLLEDV 747
            MI ELNERSR IFR+LVEAYLA+G PVGSK+I+A LP  LS A++RNVMK+LE +GL+Y+PHTSAGRIPT  GLRMFVDA+LE+GN+TE+E R+IE   +   A++ED+L+DAT+RLSGL+RCAGLVLSPK E PLKH+EFV  GP QAL ++V +DG VENR+I +P GMT  A+ QA+NYLNAR+LGRTL EAR  IL ELE+++ ELDEL++KVVEAGLA WGG  +   G++LIVRG SNLLE+V
Sbjct:    1 MIKELNERSRHIFRSLVEAYLADGSPVGSKTISAHLPMSLSPASIRNVMKELETLGLIYSPHTSAGRIPTHAGLRMFVDAMLEVGNLTEQERRQIETSVAGSAARLEDILSDATTRLSGLSRCAGLVLSPKKEAPLKHVEFVQTGPEQALVILVSEDGSVENRIIGLPQGMTPSAITQATNYLNARVLGRTLAEARTDILGELEARKAELDELTSKVVEAGLATWGGKASEG-GSALIVRGRSNLLEEV 248          
BLAST of mRNA_P-wetherbeei_contig515.1.1 vs. uniprot
Match: UPI0015D4D795 (heat-inducible transcriptional repressor HrcA n=1 Tax=Azospirillum oleiclasticum TaxID=2735135 RepID=UPI0015D4D795)

HSP 1 Score: 299 bits (765), Expect = 4.300e-98
Identity = 157/249 (63.05%), Postives = 195/249 (78.31%), Query Frame = 1
Query:    1 MITELNERSRQIFRALVEAYLAEGIPVGSKSIAAQLPTLLSSATVRNVMKDLEDMGLLYAPHTSAGRIPTQTGLRMFVDALLEIGNVTEKEAREIEAMASSHGAKMEDVLADATSRLSGLARCAGLVLSPKHEPPLKHIEFVNIGPGQALTVIVGQDGHVENRLITVPLGMTAGALQQASNYLNARLLGRTLEEARRQILVELESKRLELDELSAKVVEAGLAVWGGGHNRSAGASLIVRGHSNLLEDV 747
            MI+ELN+RSR+IFR +V+AY+A G PVGS++I+ +L   LS AT+RNVM DLE+ GLLY+PHTSAGRIPT+ GLR+FVD LLEIG+VTE E   IEA  +S G  + DVL +AT  LSGL+RCAGLV++PK + PLKHIEFV++GPG+AL V+V +DG VENR+I VPLG+    LQ +SNYLNA+L GRTLEEAR ++  EL+S R ELDELS +VVEAGLA WGG    +    LIVRG + LLEDV
Sbjct:    1 MISELNQRSREIFRLIVDAYVASGEPVGSRTISRRLGMALSPATIRNVMADLEEQGLLYSPHTSAGRIPTEAGLRLFVDGLLEIGSVTEDERTVIEAKCASAGRSLPDVLNEATGMLSGLSRCAGLVMAPKTDRPLKHIEFVSLGPGRALVVLVNEDGLVENRVIEVPLGLPGSTLQMSSNYLNAKLSGRTLEEARTEVQQELDSHRTELDELSRRVVEAGLATWGG---TAQEGHLIVRGQAKLLEDV 246          
BLAST of mRNA_P-wetherbeei_contig515.1.1 vs. uniprot
Match: A0A3C0TRR1_9PROT (Heat-inducible transcriptional repressor HrcA (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TRR1_9PROT)

HSP 1 Score: 290 bits (742), Expect = 4.580e-97
Identity = 150/175 (85.71%), Postives = 162/175 (92.57%), Query Frame = 1
Query:    1 MITELNERSRQIFRALVEAYLAEGIPVGSKSIAAQLPTLLSSATVRNVMKDLEDMGLLYAPHTSAGRIPTQTGLRMFVDALLEIGNVTEKEAREIEAMASSHGAKMEDVLADATSRLSGLARCAGLVLSPKHEPPLKHIEFVNIGPGQALTVIVGQDGHVENRLITVPLGMTAGA 525
            MI+ELNERSRQIFRALVEAYLAEG+PVGSKSIAAQLP +LSSAT+RNVMKDLEDMGLLY+PHTSAGR+PTQ GLRMFVDALLE+GNVTE EAREIEAMA + GAK E+VL+DATSRLSGLARCAGLVLSPK E  LKHIEFV I PGQALT+IVGQDG VENRLITVP+GMTA A
Sbjct:    1 MISELNERSRQIFRALVEAYLAEGVPVGSKSIAAQLPAVLSSATIRNVMKDLEDMGLLYSPHTSAGRMPTQAGLRMFVDALLEVGNVTEAEAREIEAMAMARGAKPEEVLSDATSRLSGLARCAGLVLSPKQEIVLKHIEFVLISPGQALTIIVGQDGQVENRLITVPMGMTADA 175          
BLAST of mRNA_P-wetherbeei_contig515.1.1 vs. uniprot
Match: G7Z778_AZOL4 (Heat-inducible transcription repressor HrcA n=24 Tax=Azospirillaceae TaxID=2829815 RepID=G7Z778_AZOL4)

HSP 1 Score: 292 bits (747), Expect = 2.440e-95
Identity = 150/249 (60.24%), Postives = 193/249 (77.51%), Query Frame = 1
Query:    1 MITELNERSRQIFRALVEAYLAEGIPVGSKSIAAQLPTLLSSATVRNVMKDLEDMGLLYAPHTSAGRIPTQTGLRMFVDALLEIGNVTEKEAREIEAMASSHGAKMEDVLADATSRLSGLARCAGLVLSPKHEPPLKHIEFVNIGPGQALTVIVGQDGHVENRLITVPLGMTAGALQQASNYLNARLLGRTLEEARRQILVELESKRLELDELSAKVVEAGLAVWGGGHNRSAGASLIVRGHSNLLEDV 747
            MI ELN+RSR++FR +V+AY+A G PVGS++I+ +L   LS AT+RNVM DLE+ GLLYAPHTSAGRIPT  GLRMFVD LLEIG++TE E   IEA  ++ G    DVL +A++ LSGL+ CAGLV++PK + PLKHIEFV++GPG+AL V+V +DG VENR+I VP+G+    LQ  SN+L+A+L GRTL+EAR+++L E+E ++ +LDELS KVV AGLA W G    +AG  LIVRG S LLEDV
Sbjct:    1 MINELNQRSREVFRLIVDAYVASGEPVGSRTISRRLGMALSPATIRNVMADLEEQGLLYAPHTSAGRIPTDAGLRMFVDGLLEIGSLTEDERASIEAKCAASGRAFADVLGEASTMLSGLSHCAGLVVAPKTDRPLKHIEFVSLGPGRALVVLVNEDGLVENRVIEVPMGVPTSTLQTVSNFLSAKLAGRTLDEARQEVLQEIEQQKTQLDELSRKVVSAGLATWAGSGGSNAG-QLIVRGQSRLLEDV 248          
BLAST of mRNA_P-wetherbeei_contig515.1.1 vs. uniprot
Match: A0A6A7LWM0_9PROT (Heat-inducible transcription repressor HrcA n=16 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A6A7LWM0_9PROT)

HSP 1 Score: 292 bits (747), Expect = 4.750e-95
Identity = 146/248 (58.87%), Postives = 191/248 (77.02%), Query Frame = 1
Query:    4 ITELNERSRQIFRALVEAYLAEGIPVGSKSIAAQLPTLLSSATVRNVMKDLEDMGLLYAPHTSAGRIPTQTGLRMFVDALLEIGNVTEKEAREIEAMASSHGAKMEDVLADATSRLSGLARCAGLVLSPKHEPPLKHIEFVNIGPGQALTVIVGQDGHVENRLITVPLGMTAGALQQASNYLNARLLGRTLEEARRQILVELESKRLELDELSAKVVEAGLAVWGGGHNRSAGASLIVRGHSNLLEDV 747
            + ELNER+R++ R +VE Y+  G PVGS+++  +L   LS AT+RN+M DL+D+GLLYAPHTSAGR+PT  GL++FV+ LLE+GN++E E   IEA   + G  + + L  AT+ LSGL+RCAG+V++PK E PLKHIEFVN+GPG+AL V V Q GHVENR+I  P+GM   AL +ASNYLNARL+GRT+EEARRQIL +LE KR ELDEL+AKV+E+G+A W G      G++LIVRG + LLED+
Sbjct:   26 VAELNERAREVLRHVVEGYVETGEPVGSRALTRKLTETLSPATIRNIMADLQDLGLLYAPHTSAGRLPTDAGLKLFVNGLLEVGNLSEDERESIEARCRTVGRSVTEALEQATTLLSGLSRCAGVVMAPKTEQPLKHIEFVNLGPGRALVVTVTQSGHVENRVIDTPIGMPPSALVEASNYLNARLIGRTIEEARRQILEDLELKRAELDELTAKVIESGMATWAG----EPGSALIVRGQARLLEDI 269          
BLAST of mRNA_P-wetherbeei_contig515.1.1 vs. uniprot
Match: A0A2S2CNN0_9PROT (Heat-inducible transcription repressor HrcA n=2 Tax=Azospirillum TaxID=191 RepID=A0A2S2CNN0_9PROT)

HSP 1 Score: 290 bits (742), Expect = 1.540e-94
Identity = 149/251 (59.36%), Postives = 194/251 (77.29%), Query Frame = 1
Query:    1 MITELNERSRQIFRALVEAYLAEGIPVGSKSIAAQLPTLLSSATVRNVMKDLEDMGLLYAPHTSAGRIPTQTGLRMFVDALLEIGNVTEKEAREIEAMASSHGAKMEDVLADATSRLSGLARCAGLVLSPKHEPPLKHIEFVNIGPGQALTVIVGQDGHVENRLITVPLGMTAGALQQASNYLNARLLGRTLEEARRQILVELESKRLELDELSAKVVEAGLAVWGG--GHNRSAGASLIVRGHSNLLEDV 747
            MITELN+RSR+IFR +V+AY+A G PVGS++I+ +L  +LS AT+RNVM DLE+ GLLYAPHTSAGRIPT  GLRMFV+ LLEIG++TE E   IEA  +S G  + DVL +A++ L+GL+ CAGLV++PK + PLKHIEFV++GPG+AL V+V +DG VENR+I VP+G+    LQ  SNYL+A+L+GRTLEEAR+++  E++ +R +LDELS +VV  GLA W G  G     G  LIVRG + LLEDV
Sbjct:    1 MITELNQRSREIFRQIVDAYVATGEPVGSRTISRRLGMVLSPATIRNVMADLEEQGLLYAPHTSAGRIPTDAGLRMFVNGLLEIGSLTEDERESIEAKCASSGRALSDVLNEASTMLAGLSHCAGLVVAPKTDRPLKHIEFVSLGPGRALVVLVNEDGLVENRVIEVPVGLPTSTLQTVSNYLSAKLVGRTLEEARQEVTREIQEQRTQLDELSRRVVAEGLATWAGAGGSQGGGGGQLIVRGQARLLEDV 251          
BLAST of mRNA_P-wetherbeei_contig515.1.1 vs. uniprot
Match: A0A060DFR4_AZOBR (Heat-inducible transcription repressor HrcA n=11 Tax=Azospirillum TaxID=191 RepID=A0A060DFR4_AZOBR)

HSP 1 Score: 290 bits (741), Expect = 1.980e-94
Identity = 148/249 (59.44%), Postives = 198/249 (79.52%), Query Frame = 1
Query:    1 MITELNERSRQIFRALVEAYLAEGIPVGSKSIAAQLPTLLSSATVRNVMKDLEDMGLLYAPHTSAGRIPTQTGLRMFVDALLEIGNVTEKEAREIEAMASSHGAKMEDVLADATSRLSGLARCAGLVLSPKHEPPLKHIEFVNIGPGQALTVIVGQDGHVENRLITVPLGMTAGALQQASNYLNARLLGRTLEEARRQILVELESKRLELDELSAKVVEAGLAVWGGGHNRSAGASLIVRGHSNLLEDV 747
            MITELN+RSR+IFR +V+AY+A G PVGS++I+ +L   LS AT+RNVM DLE+ GLLYAPHTSAGRIPT+ GLR+FV+ LLEIG+++E E   IEA  +S G  ++DVL +A++ LSGL+ CAGLV++PK + PLKHIEFV++ PG+AL V+V +DG VENR+I VP+G+ A  LQ  SN+L+A+L+GRTL+EAR+ +L E+E ++ ELDELS +VV AGLA W G   +++G  LIVRG + LLEDV
Sbjct:    1 MITELNQRSREIFRLIVDAYVATGEPVGSRTISRRLGMALSPATIRNVMADLEEQGLLYAPHTSAGRIPTEAGLRLFVNGLLEIGSLSEDERGSIEAKCASSGRSLQDVLGEASTLLSGLSHCAGLVVAPKTDRPLKHIEFVSLAPGRALVVLVNEDGLVENRVIEVPVGVPAATLQMVSNFLSAKLVGRTLDEARQAVLREIEDQKTELDELSQRVVSAGLATWAGSGGQNSG-QLIVRGQAKLLEDV 248          
BLAST of mRNA_P-wetherbeei_contig515.1.1 vs. uniprot
Match: A0A3S0K688_9PROT (Heat-inducible transcription repressor HrcA n=2 Tax=Azospirillum TaxID=191 RepID=A0A3S0K688_9PROT)

HSP 1 Score: 288 bits (738), Expect = 5.630e-94
Identity = 150/249 (60.24%), Postives = 192/249 (77.11%), Query Frame = 1
Query:    1 MITELNERSRQIFRALVEAYLAEGIPVGSKSIAAQLPTLLSSATVRNVMKDLEDMGLLYAPHTSAGRIPTQTGLRMFVDALLEIGNVTEKEAREIEAMASSHGAKMEDVLADATSRLSGLARCAGLVLSPKHEPPLKHIEFVNIGPGQALTVIVGQDGHVENRLITVPLGMTAGALQQASNYLNARLLGRTLEEARRQILVELESKRLELDELSAKVVEAGLAVWGGGHNRSAGASLIVRGHSNLLEDV 747
            MI+ELN+RSR IFR +V+AY+A G PVGS++I+ +L   LS AT+RNVM DLE+ GLLYAPH SAGRIPT  GLRMFV+ LLE+G +T++E   IEA  +  G  + DVL++AT  LSGL+RCAGLVL+PK + PLKHIEFV +GPG+AL V+V ++G VENR+I VP+G+ A  LQ  SNYL+ARL+GRTL+EAR+ +L E++ ++ ELDELS +VV AGLA W G     +G  LIVRG S LLEDV
Sbjct:    1 MISELNQRSRDIFRLIVDAYVASGEPVGSRTISRRLGMTLSPATIRNVMADLEEQGLLYAPHASAGRIPTDAGLRMFVNGLLEVGALTDEERVTIEAQCAGSGRALADVLSEATGMLSGLSRCAGLVLAPKTDRPLKHIEFVALGPGRALVVLVNENGLVENRVIEVPVGLPASTLQVVSNYLSARLVGRTLDEARQDVLTEIQEQQTELDELSRRVVAAGLATWSGSAGMDSG-QLIVRGQSKLLEDV 248          
BLAST of mRNA_P-wetherbeei_contig515.1.1 vs. uniprot
Match: A0A2U1WMQ5_9PROT (Heat-inducible transcription repressor HrcA n=1 Tax=Azospirillum sp. TSO22-1 TaxID=716789 RepID=A0A2U1WMQ5_9PROT)

HSP 1 Score: 286 bits (733), Expect = 3.020e-93
Identity = 149/250 (59.60%), Postives = 196/250 (78.40%), Query Frame = 1
Query:    1 MITELNERSRQIFRALVEAYLAEGIPVGSKSIAAQLPTLLSSATVRNVMKDLEDMGLLYAPHTSAGRIPTQTGLRMFVDALLEIGNVTEKEAREIEAMASSHGAKMEDVLADATSRLSGLARCAGLVLSPKHEPPLKHIEFVNIGPGQALTVIVGQDGHVENRLITVPLGMTAGALQQASNYLNARLLGRTLEEARRQILVELESKRLELDELSAKVVEAGLAVWGGGHNRSAG-ASLIVRGHSNLLEDV 747
            MI+ELN+RSR+IFR +V+AY+A G PVGS++I+ +L   LS AT+RNVM DLE++GLLYAPHTSAGRIPT+ GLR+FV+ +LE+G +TE E   IEA  SS G  + DV+ +A++ LSGL+RCAGLVL+PK +  LKHIEFV++GPG+AL V+V +DG VENR++ VP+G+    LQ ASNYL +RL+GRTL+EAR+++L E+  +R ELDE+S +VV AGLA W G    SAG   LIVRG + LLEDV
Sbjct:    1 MISELNQRSREIFRHIVDAYVATGEPVGSRTISRRLGMALSPATIRNVMADLEELGLLYAPHTSAGRIPTELGLRLFVNGILEVGALTEDERESIEAKCSSSGRALSDVMREASAMLSGLSRCAGLVLAPKTDRALKHIEFVSLGPGRALVVLVNEDGLVENRVVEVPVGLPGSTLQMASNYLTSRLVGRTLDEARKEVLREIGEQRTELDEVSKRVVAAGLATWAG----SAGDGQLIVRGQAKLLEDV 246          
BLAST of mRNA_P-wetherbeei_contig515.1.1 vs. uniprot
Match: A0A2D8PT35_9PROT (Heat-inducible transcription repressor HrcA n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PT35_9PROT)

HSP 1 Score: 286 bits (731), Expect = 8.320e-93
Identity = 143/249 (57.43%), Postives = 191/249 (76.71%), Query Frame = 1
Query:    1 MITELNERSRQIFRALVEAYLAEGIPVGSKSIAAQLPTLLSSATVRNVMKDLEDMGLLYAPHTSAGRIPTQTGLRMFVDALLEIGNVTEKEAREIEAMASSHGAKMEDVLADATSRLSGLARCAGLVLSPKHEPPLKHIEFVNIGPGQALTVIVGQDGHVENRLITVPLGMTAGALQQASNYLNARLLGRTLEEARRQILVELESKRLELDELSAKVVEAGLAVWGGGHNRSAGASLIVRGHSNLLEDV 747
            +I+ELN RSR+IFR +VEA++ +G PVGS++++ +L   LS ATVRNVM DLEDMGLLYAPH SAGR+PT  GLRMFVD LLEIG+++++E   IEA   +HG  M + L +ATS LSGLA+CAGLV++PK   PLKHIEFVNIG G+A+ V+V +DG VENR++ +P G    AL +A NYLNARL G+T+E+ARR I  E+E +R ++DE++A +V+AGLA W G    SA  +LIV+G S LL+++
Sbjct:    8 IISELNGRSREIFREIVEAFVEDGTPVGSRTLSRRLKDPLSPATVRNVMADLEDMGLLYAPHASAGRLPTDAGLRMFVDGLLEIGDLSQEERENIEARCVAHGTSMTEALGEATSLLSGLAQCAGLVIAPKTGRPLKHIEFVNIGDGRAMAVLVTEDGFVENRIVEMPAGTPPSALVKAGNYLNARLAGKTIEDARRAITTEIEQRRAQIDEITANLVDAGLAAWAGPKGDSARGTLIVKGQSRLLDEI 256          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig515.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A353LNG0_9PROT2.770e-10967.07Heat-inducible transcription repressor HrcA n=5 Ta... [more]
UPI0015D4D7954.300e-9863.05heat-inducible transcriptional repressor HrcA n=1 ... [more]
A0A3C0TRR1_9PROT4.580e-9785.71Heat-inducible transcriptional repressor HrcA (Fra... [more]
G7Z778_AZOL42.440e-9560.24Heat-inducible transcription repressor HrcA n=24 T... [more]
A0A6A7LWM0_9PROT4.750e-9558.87Heat-inducible transcription repressor HrcA n=16 T... [more]
A0A2S2CNN0_9PROT1.540e-9459.36Heat-inducible transcription repressor HrcA n=2 Ta... [more]
A0A060DFR4_AZOBR1.980e-9459.44Heat-inducible transcription repressor HrcA n=11 T... [more]
A0A3S0K688_9PROT5.630e-9460.24Heat-inducible transcription repressor HrcA n=2 Ta... [more]
A0A2U1WMQ5_9PROT3.020e-9359.60Heat-inducible transcription repressor HrcA n=1 Ta... [more]
A0A2D8PT35_9PROT8.320e-9357.43Heat-inducible transcription repressor HrcA n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig515contigP-wetherbeei_contig515:4..750 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1205680.CAKO01000040_gene604
Preferred namehrcA
PFAMsHrcA,HrcA_DNA-bdg
Model size747
Max annot lvl204441|Rhodospirillales
KEGG koko:K03705
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.67e-94
EggNOG OGsCOG1420@1|root,COG1420@2|Bacteria,1MVX4@1224|Proteobacteria,2TRUF@28211|Alphaproteobacteria,2JQTD@204441|Rhodospirillales
DescriptionNegative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
Cds size747
COG categoryK
BRITEko00000,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186773.4808538-CDS-P-wetherbeei_contig515:3..7501683186773.4808538-CDS-P-wetherbeei_contig515:3..750Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig515 4..750 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig515.1.1prot_P-wetherbeei_contig515.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig515 4..750 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig515.1.1

>prot_P-wetherbeei_contig515.1.1 ID=prot_P-wetherbeei_contig515.1.1|Name=mRNA_P-wetherbeei_contig515.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=249bp
MITELNERSRQIFRALVEAYLAEGIPVGSKSIAAQLPTLLSSATVRNVMK
DLEDMGLLYAPHTSAGRIPTQTGLRMFVDALLEIGNVTEKEAREIEAMAS
SHGAKMEDVLADATSRLSGLARCAGLVLSPKHEPPLKHIEFVNIGPGQAL
TVIVGQDGHVENRLITVPLGMTAGALQQASNYLNARLLGRTLEEARRQIL
VELESKRLELDELSAKVVEAGLAVWGGGHNRSAGASLIVRGHSNLLEDV
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mRNA from alignment at P-wetherbeei_contig515:4..750-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig515.1.1 ID=mRNA_P-wetherbeei_contig515.1.1|Name=mRNA_P-wetherbeei_contig515.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=747bp|location=Sequence derived from alignment at P-wetherbeei_contig515:4..750- (Phaeothamnion wetherbeei SAG_119_79)
ATGATTACGGAACTGAATGAACGCTCGCGGCAGATTTTCCGCGCATTGGT CGAAGCCTATCTGGCCGAGGGAATTCCCGTGGGCTCCAAAAGCATTGCCG CGCAACTGCCCACGCTGCTCAGTTCCGCGACGGTCCGCAATGTGATGAAA GACCTGGAGGATATGGGGTTGCTCTATGCGCCGCATACCAGTGCAGGCCG TATTCCCACGCAAACCGGCCTGCGCATGTTTGTCGACGCGCTGCTGGAAA TCGGCAATGTCACCGAAAAAGAGGCGCGCGAAATCGAGGCCATGGCCTCC TCGCATGGCGCCAAGATGGAAGATGTGCTGGCGGACGCCACCAGCCGCCT CTCGGGTCTGGCGCGTTGCGCGGGGCTGGTGCTGTCGCCCAAGCATGAAC CGCCGCTCAAGCATATCGAATTTGTAAATATCGGTCCCGGTCAGGCGCTG ACGGTGATTGTCGGGCAGGATGGCCATGTGGAAAACCGGCTGATCACGGT GCCGCTGGGCATGACGGCGGGCGCGCTGCAACAGGCCAGCAATTATCTGA ATGCGCGGCTTCTGGGCCGCACCCTGGAAGAGGCGCGCAGGCAGATACTG GTGGAACTGGAGAGCAAGCGCCTGGAGCTGGATGAGCTGAGCGCCAAGGT GGTGGAAGCGGGGCTTGCGGTCTGGGGCGGCGGGCATAATCGCAGTGCAG GGGCCTCGCTGATTGTGCGGGGCCATTCCAATCTGCTGGAGGATGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig515:4..750-

>mRNA_P-wetherbeei_contig515.1.1 ID=mRNA_P-wetherbeei_contig515.1.1|Name=mRNA_P-wetherbeei_contig515.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=747bp|location=Sequence derived from alignment at P-wetherbeei_contig515:4..750- (Phaeothamnion wetherbeei SAG_119_79)
ATGATTACGGAACTGAATGAACGCTCGCGGCAGATTTTCCGCGCATTGGT
CGAAGCCTATCTGGCCGAGGGAATTCCCGTGGGCTCCAAAAGCATTGCCG
CGCAACTGCCCACGCTGCTCAGTTCCGCGACGGTCCGCAATGTGATGAAA
GACCTGGAGGATATGGGGTTGCTCTATGCGCCGCATACCAGTGCAGGCCG
TATTCCCACGCAAACCGGCCTGCGCATGTTTGTCGACGCGCTGCTGGAAA
TCGGCAATGTCACCGAAAAAGAGGCGCGCGAAATCGAGGCCATGGCCTCC
TCGCATGGCGCCAAGATGGAAGATGTGCTGGCGGACGCCACCAGCCGCCT
CTCGGGTCTGGCGCGTTGCGCGGGGCTGGTGCTGTCGCCCAAGCATGAAC
CGCCGCTCAAGCATATCGAATTTGTAAATATCGGTCCCGGTCAGGCGCTG
ACGGTGATTGTCGGGCAGGATGGCCATGTGGAAAACCGGCTGATCACGGT
GCCGCTGGGCATGACGGCGGGCGCGCTGCAACAGGCCAGCAATTATCTGA
ATGCGCGGCTTCTGGGCCGCACCCTGGAAGAGGCGCGCAGGCAGATACTG
GTGGAACTGGAGAGCAAGCGCCTGGAGCTGGATGAGCTGAGCGCCAAGGT
GGTGGAAGCGGGGCTTGCGGTCTGGGGCGGCGGGCATAATCGCAGTGCAG
GGGCCTCGCTGATTGTGCGGGGCCATTCCAATCTGCTGGAGGATGTG
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