mRNA_P-wetherbeei_contig5146.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5146.2.1 vs. uniprot
Match: A0A835YSN9_9STRA (Protein YIF1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSN9_9STRA) HSP 1 Score: 251 bits (641), Expect = 3.800e-76 Identity = 146/274 (53.28%), Postives = 172/274 (62.77%), Query Frame = 3
Query: 582 MLHMGGSLARNLLASNISLYEPGVWGVWHSLKYYFAVDNAYVLRKLKALLLPVAKHDWARRRAPPEFGANPAAAAXXXXXXXXXGDIRPGSIGGSGQSPPAGPAAXXXXXXXXXPPRYLRPCLDPNAPDLYLPLMAFITFVLTTGFVKGASGTFTPAALTEATSACVVTQLLEVLLFRLGLYLLGAPAAMLDLVAYTGYKYVALVTNMAAGIAFGWTGYYVXXXXXXXMAAYFILKTMADAVPAGGGSTREFMLLGLSGLQLLVIWWLGYTREL 1403
ML+MGG++A++ ++SN++ Y+PGV G W LK+YFAVDNAYVLRK K LLLPV K W R P A A AA GS Q ++ RPC+D NAPDLYLPLMAFIT L +GFVKG + FTP L E TS+ +V QLLEVLL RLGLYLLGAPAAMLDLVA+TGYK+VAL NMA GIA G TGYYV M AYF+LKTMA AVP G S R+ M+ G + LQ IWWLG ++L
Sbjct: 1 MLNMGGTMAKSFISSNMARYQPGVSGFWALLKHYFAVDNAYVLRKFKVLLLPVLKKSW--HRVP----AEEAGAAQD----------------GSAQF------------------KFARPCVDENAPDLYLPLMAFITHALISGFVKGRASNFTPEVLVEVTSSAMVVQLLEVLLVRLGLYLLGAPAAMLDLVAFTGYKFVALCINMAVGIALGRTGYYVALVYTGLMTAYFMLKTMACAVPLGPAS-RDVMIAGFAALQFASIWWLGDPKDL 233
BLAST of mRNA_P-wetherbeei_contig5146.2.1 vs. uniprot
Match: A0A6H5JNN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN8_9PHAE) HSP 1 Score: 249 bits (636), Expect = 8.200e-73 Identity = 137/295 (46.44%), Postives = 176/295 (59.66%), Query Frame = 3
Query: 540 MDWNHWAPAGVNEHMLHMGGSLARNLLASNISLYEPGVWGVWHSLKYYFAVDNAYVLRKLKALLLPVAKHDWARRRAPPEFGANPAAAAXXXXXXXXXGDIRPGSIGGSGQSPPAGPAAXXXXXXXXXPPRYLRPCLDPNAPDLYLPLMAFITFVLTTGFVKGAS-------GTFTPAALTEATSACVVTQLLEVLLFRLGLYLLGAPAAMLDLVAYTGYKYVALVTNMAAGIAFGWTGYYVXXXXXXXMAAYFILKTMADAVPAGGGSTREFMLLGLSGLQLLVIWWLGYTREL 1403
+DW+ W P G+N ML++GG++A N L SN++ Y+P V G W++LK YF VDN YVL+KLK LLL V + DW R + E D RP ++ RP D NAPDLY+PLM+FITFVL TG+ KG++ GTF+P LTE TS+C+VTQLLEVLL RLGLYLL +PA +LDL+AYTGYKYV L NM G+ G T YY+ M ++F+ KTMA VP G S RE M+LG + LQLL +WWLG++ +L
Sbjct: 181 LDWHQWTPDGMNAQMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLRKDWFRLPSEDEV----------------KDDGRP---------------------------KFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLIAYTGYKYVGLCINMTVGVFSGRTWYYLALLWTGSMMSFFMFKTMAHTVPTGSAS-REVMILGFAALQLLSMWWLGHSSDL 431
BLAST of mRNA_P-wetherbeei_contig5146.2.1 vs. uniprot
Match: D7FLH1_ECTSI (Protein YIF1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLH1_ECTSI) HSP 1 Score: 236 bits (601), Expect = 2.880e-69 Identity = 133/294 (45.24%), Postives = 170/294 (57.82%), Query Frame = 3
Query: 540 MDWNHWAPAGVNEHMLHMGGSLARNLLASNISLYEPGVWGVWHSLKYYFAVDNAYVLRKLKALLLPVAKHDWARRRAPPEFGANPAAAAXXXXXXXXXGDIRPGSIGGSGQSPPAGPAAXXXXXXXXXPPRYLRPCLDPNAPDLYLPLMAFITFVLTTGFVKGAS-------GTFTPAALTEATSACVVTQLLEVLLFRLGLYLLGAPAAMLDLVAYTGYKYVALVTNMAAGIAFGWTGYYVXXXXXXXMAAYFILKTMADAVPAGGGSTREFMLLGLSGLQLLVIWWLGYTRE 1400
+DW+ W P G+N ML++GG++A N L SN++ Y+P V G W++LK YF VDN YVL+KLK LLL V K DW R + E + P++ RP D NAPDLY+PLM+FITFVL TG+ KG++ GTF+P LTE TS+C+VTQLLEVLL RLGLYLL +PA +LDLVAYTGYKYV L NM G+ G T YY+ M ++F+ KTMA VP G S RE M+LG + LQ L + +G R+
Sbjct: 54 LDWHQWTPDGMNAQMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDDQGR------------------------------------------PKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYKYVGLCINMTVGVFSGKTWYYLALLWTGSMMSFFMFKTMAHTVPTGSAS-REVMILGFAPLQFLSMGGVGQWRD 304
BLAST of mRNA_P-wetherbeei_contig5146.2.1 vs. uniprot
Match: W7TGL4_9STRA (Protein YIF1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGL4_9STRA) HSP 1 Score: 181 bits (460), Expect = 7.830e-48 Identity = 116/274 (42.34%), Postives = 144/274 (52.55%), Query Frame = 3
Query: 564 AGVNEHMLHMGGSLARNLLASNISLYEPGVWGVWHSLKYYFAVDNAYVLRKLKALLLPVAKHDWARRRAPPEFGANPAAAAXXXXXXXXXGDIRPGSIGGSGQSPPAGPAAXXXXXXXXXPPRYLRPCLDPNAPDLYLPLMAFITFVLTTGFVKGASGTFTPAALTEATSACVVTQLLEVLLFRLGLYLLGAPAAMLDLVAYTGYKYVALVTNMAAGIAFGWTGYYVXXXXXXXMAAYFILKTMADAVPAGGGSTR-------EFMLLGLSGLQ 1364
A N MG + + L +++S Y P V VWH LKYYFAV++ YV RKL L+ P K W RR + GA ++ A G GG+ S A P+Y P LD NAPDLY+PLMAF+T+VL TG+ KG +FTP L E TS+C+V QLLE+ + RLGLYLL APA +LDL+A TGYKYVAL NM G+ G Y AYF LKT A AV G E M+LG + +Q
Sbjct: 103 AAANSQAFSMGVGMGQEYLNASVSRYTPWVTSVWHGLKYYFAVNHHYVKRKLFTLVFPYRKRHW--RRQMKDSGAAGSSGAY-------------GQQGGNADSASA-----------MYRPQYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPATLLDLLAVTGYKYVALNFNMVLGLNLGPRVYLAAMVYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALMQ 350
BLAST of mRNA_P-wetherbeei_contig5146.2.1 vs. uniprot
Match: A0A7S3JT16_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JT16_9STRA) HSP 1 Score: 170 bits (431), Expect = 2.410e-43 Identity = 101/263 (38.40%), Postives = 135/263 (51.33%), Query Frame = 3
Query: 630 ISLYEPGVWGVWHSLKYYFAVDNAYVLRKLKALLLPVAKHDWARRRAPPEFGANPAAAAXXXXXXXXXGDIRPGSIGGSGQSPPAGPAAXXXXXXXXXPPRYLRPCLDPNAPDLYLPLMAFITFVLTTGFVKGASGTFTPAALTEATSACVVTQLLEVLLFRLGLYLLGAPAAMLDLVAYTGYKYVALVTNMAAGIAFGWTGYYVXXXXXXXMAAYFILKTMADAVPA-----GGGSTREFMLLGLSGLQLLVIWWLGYTREL 1403
+S + PG W L+ YFAV + Y L KL+ALL+P K W R R +P G++ P + P RY P D NAPDLY+PL+AF+TF L +G+VKG SG FTP L + S C + Q+ E+ L+ +GLY GA +LD+ +TGYKYVAL N+ G+ FG YY A+Y++LKTMA VP G RE ++L L +Q + IW+LGY REL
Sbjct: 195 MSRWMPGFASFWSKLRSYFAVSHRYTLSKLRALLIPWTKKAWRRERLASNMPTSPP-----------------------GENAAGRPVSGE-------PIRYALPVDDDNAPDLYIPLVAFLTFALVSGYVKGTSGKFTPQVLAQIVSNCALFQVFELALYSIGLYASGATIPLLDIAVHTGYKYVALCVNLLFGLVFGLRAYYCSLAYTALAASYYMLKTMAQTVPTKRDPRAVGPKREVVVLLLGAIQGMSIWFLGYNREL 427
BLAST of mRNA_P-wetherbeei_contig5146.2.1 vs. uniprot
Match: A0A7S2LHT7_9STRA (Protein YIF1 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LHT7_9STRA) HSP 1 Score: 166 bits (420), Expect = 1.980e-42 Identity = 101/291 (34.71%), Postives = 144/291 (49.48%), Query Frame = 3
Query: 555 WAPAGVNEHM-----LHMGGSLARNLLASNISLYEPGVWGVWHSLKYYFAVDNAYVLRKLKALLLPVAKHDWARRRAPPEFGANPAAAAXXXXXXXXXGDIRPGSIGGSGQSPPAGPAAXXXXXXXXXPPRYLRPCLDPNAPDLYLPLMAFITFVLTTGFVKGASGTFTPAALTEATSACVVTQLLEVLLFRLGLYLLGAPAAMLDLVAYTGYKYVALVTNMAAGIAFGWTGYYVXXXXXXXMAAYFILKTMADAVP---AGGGSTREFMLLGLSGLQLLVIWWLGYTREL 1403
W PA +N M ++M + LA+ + PG+ + +L+YYFAVDN+YVL K++ +L P K DW R A G+++ Y P D NAPDLY+P M+ +T+VL + G+ G FTP AL E T+ C VTQ+LEVL RLG Y++ P ++LD+ +TGYKY+ L NM G+ FG+ YY A+F+L+TMA+ VP A G RE M++ + Q L +WWL T+ L
Sbjct: 117 WNPANINSMMKNDMVMNMAYDGGKAFLANGAARMIPGLELLMVTLRYYFAVDNSYVLHKMQRVLFPFLKKDWKRLEA------------------EGHGNVK-----------------------------YALPRFDENAPDLYIPFMSLVTYVLLCALLFGSKGQFTPEALPEITTRCFVTQILEVLAIRLGHYVMQVPCSLLDMFCFTGYKYMGLCVNMLVGLFFGYWPYYGTMTWTASATAFFMLRTMANNVPRITATNGPKREVMVMVFAASQALTMWWLSQTKLL 360
BLAST of mRNA_P-wetherbeei_contig5146.2.1 vs. uniprot
Match: A0A024UUY6_9STRA (Protein YIF1 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUY6_9STRA) HSP 1 Score: 159 bits (403), Expect = 3.820e-40 Identity = 95/278 (34.17%), Postives = 136/278 (48.92%), Query Frame = 3
Query: 579 HMLHMGGSLARNLLASNISLYEPGVWGVWHSLKYYFAVDNAYVLRKLKALLLPVAKHDWARRRAPPEFGANPAAAAXXXXXXXXXGDIRPGSIGGSGQSPPAGPAAXXXXXXXXXPPRYLRPCLDPNAPDLYLPLMAFITFVLTTGFVKGASGTFTPAALTEATSACVVTQLLEVLLFRLGLYLLGAPAAMLDLVAYTGYKYVALVTNMAAGIAFGWTGYYVXXXXXXXMAAYFILKTMADAVPAGGGSTREF---MLLGLSGLQLLVIWWLGYTREL 1403
+ ++ G L + + S + G ++ S+KYYF V+N YV+ +LK LL P DW RR E A Y P +D NAPDLY+PLM+F+T++L G++KGASG F P +T+ +++C + QLLE+ L +LGLYLL + LDLV++TGYKYVALV N + G+ YY ++F L + VP R F MLL ++ LQLL+IWW Y+ E+
Sbjct: 119 YAMNHGAKLMEDQVKSFMPGAAAGALNMFGSVKYYFTVNNTYVVHRLKMLLCPFLHKDW-RRIVQSEGNGTDVA--------------------------------------------YAPPSMDKNAPDLYIPLMSFVTYILIVGYIKGASGRFNPDVITDVSTSCCLLQLLEICLMKLGLYLLNSQINWLDLVSFTGYKYVALVLNTVVHLVLGYLPYYAVLAYTGLATSFFTLNGLKGTVPEPNHDQRRFRNYMLLAMAVLQLLLIWWNSYSSEI 351
BLAST of mRNA_P-wetherbeei_contig5146.2.1 vs. uniprot
Match: F0YMN5_AURAN (Protein YIF1 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMN5_AURAN) HSP 1 Score: 156 bits (394), Expect = 4.130e-40 Identity = 104/256 (40.62%), Postives = 130/256 (50.78%), Query Frame = 3
Query: 633 SLYEPGVWGVWHSLKYYFAVDNAYVLRKLKALLLPVAKHDWARRRAPPEFGANPAAAAXXXXXXXXXGDIRPGSIGGSGQSPPAGPAAXXXXXXXXXPPRYLRPCLDPNAPDLYLPLMAFITFVLTTGFVKGASGTFTPAALTEATSACVVTQLLEVLLFRLGLYLLGAP-AAMLDLVAYTGYKYVALVTNMAAGIAFGWTGYYVXXXXXXXMAAYFILKTMADAVPA---GGGSTREFMLLGLSGLQLLVIWWLG 1388
S + PGV W SL+ YFAV +A V KL+A+L P AK W R+RA G GD R G++ G + P D NAPD Y+PL+AF+TF L G+V+G+ GTFTP L S C Q+LE+ L+ LGLYLLGA +LD+ +TGYKYVAL N A G YY A+YF+LKTMA AVPA + RE ++L LQ L IW LG
Sbjct: 22 SAWLPGVAAFWASLRVYFAVSHASVAGKLRAVLFPFAKKQWRRKRAEELDGG---------------GDARAGALHG-----------------------HALPLEDDNAPDGYVPLVAFVTFALVAGYVRGSRGTFTPEVLASIFSWCAGLQMLEIALYSLGLYLLGAHNVPVLDVACFTGYKYVALSINAIAHFFGGERAYYAALFWTGLSASYFMLKTMAQAVPAELESSAARREIVVLVFGVLQGLSIWVLG 239
BLAST of mRNA_P-wetherbeei_contig5146.2.1 vs. uniprot
Match: A0A1V9YK20_9STRA (Protein YIF1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YK20_9STRA) HSP 1 Score: 159 bits (402), Expect = 5.390e-40 Identity = 96/265 (36.23%), Postives = 132/265 (49.81%), Query Frame = 3
Query: 618 LASNISLYEPGVWGVWHSLKYYFAVDNAYVLRKLKALLLPVAKHDWARRRAPPEFGANPAAAAXXXXXXXXXGDIRPGSIGGSGQSPPAGPAAXXXXXXXXXPPRYLRPCLDPNAPDLYLPLMAFITFVLTTGFVKGASGTFTPAALTEATSACVVTQLLEVLLFRLGLYLLGAPAAMLDLVAYTGYKYVALVTNMAAGIAFGWTGYYVXXXXXXXMAAYFILKTMADAVPAGGGSTREF---MLLGLSGLQLLVIWWLGYTREL 1403
+ + IS + PG G + S+KYYF V+N+YVL +LK LL+P ++W RRR E A A Y P D NAPDLY+PLM+F T++L GF+KG SG F P + + C+V Q LE+ + + L++L + + LDLV++TGYKYV LV N I G YYV YF+L+ + +VP +R F MLLGLS Q+++IWW YT EL
Sbjct: 130 MENKISSFVPGAKGAFGSVKYYFTVNNSYVLTRLKMLLVPFLHNNW-RRRIMTEASNGQADAV------------------------------------------YYPPSEDVNAPDLYIPLMSFATYILLVGFIKGTSGQFNPDVIGDVGMYCIVLQFLEIAIMKGCLHVLNSSVSFLDLVSFTGYKYVPLVLNTVVHIVLGSLAYYVALVYTGLTTTYFMLQCLKGSVPEPSYESRRFRTYMLLGLSAAQMVLIWWNSYTGEL 351
BLAST of mRNA_P-wetherbeei_contig5146.2.1 vs. uniprot
Match: W4F9U6_9STRA (Protein YIF1 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4F9U6_9STRA) HSP 1 Score: 159 bits (402), Expect = 6.200e-40 Identity = 95/278 (34.17%), Postives = 136/278 (48.92%), Query Frame = 3
Query: 579 HMLHMGGSLARNLLASNISLYEPGVWGVWHSLKYYFAVDNAYVLRKLKALLLPVAKHDWARRRAPPEFGANPAAAAXXXXXXXXXGDIRPGSIGGSGQSPPAGPAAXXXXXXXXXPPRYLRPCLDPNAPDLYLPLMAFITFVLTTGFVKGASGTFTPAALTEATSACVVTQLLEVLLFRLGLYLLGAPAAMLDLVAYTGYKYVALVTNMAAGIAFGWTGYYVXXXXXXXMAAYFILKTMADAVPAGGGSTREF---MLLGLSGLQLLVIWWLGYTREL 1403
+ ++ G + + + S + G ++ S+KYYF V+N YV+ +LK LL P DW RR G N Y P +D NAPDLY+PLM+F+T++L G++KGASG F P +TE ++ C + QL+E+ L +LGLYLL + LDLV++TGYKYVALV N + G+ YYV ++F L + VP R F MLL ++ LQLL+IWW Y+ E+
Sbjct: 124 YAMNHGAKMMEDQVKSFMPGAAAGALNMFGSVKYYFTVNNTYVVHRLKMLLCPFIHKDW--RRIVQNEGNNTGVDVV-----------------------------------------YAPPSMDKNAPDLYIPLMSFVTYILIVGYIKGASGRFNPDVITEVSTYCCLMQLVEICLMKLGLYLLNSQINWLDLVSFTGYKYVALVINTVVHLILGYIPYYVVLAYTGIATSFFTLNGLKGTVPEPNHDQRRFRNYMLLAMAVLQLLLIWWNSYSSEI 358 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5146.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5146.2.1 >prot_P-wetherbeei_contig5146.2.1 ID=prot_P-wetherbeei_contig5146.2.1|Name=mRNA_P-wetherbeei_contig5146.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=439bp MSLPRPGGPAAAQTGERRRPPDGSVAQTGQQGVTMAPITPQASGFPQPAAback to top mRNA from alignment at P-wetherbeei_contig5146:1055..3826+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5146.2.1 ID=mRNA_P-wetherbeei_contig5146.2.1|Name=mRNA_P-wetherbeei_contig5146.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2772bp|location=Sequence derived from alignment at P-wetherbeei_contig5146:1055..3826+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5146:1055..3826+ >mRNA_P-wetherbeei_contig5146.2.1 ID=mRNA_P-wetherbeei_contig5146.2.1|Name=mRNA_P-wetherbeei_contig5146.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1317bp|location=Sequence derived from alignment at P-wetherbeei_contig5146:1055..3826+ (Phaeothamnion wetherbeei SAG_119_79)back to top |