mRNA_P-wetherbeei_contig5129.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5129.3.1
Unique NamemRNA_P-wetherbeei_contig5129.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5129.3.1 vs. uniprot
Match: D7FTG6_ECTSI (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTG6_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 1.370e-60
Identity = 105/149 (70.47%), Postives = 124/149 (83.22%), Query Frame = 1
Query:    1 ISPRSLIWLCAICSSLTSVLLGYDVGVMSGAILYIKTTLGLSTVQQEVTVGSLNLIAAFGGLVAGKAADALGRKKAIAMACFIFMVGATTMTIARSFEMLLAGRIITGVGVGCGFVIAPVYITELAPPDVRGKLVSLTDICINLGILLG 447
            +S R L++LCA CSSL S+LLGYDVGVMSGA  +I+  LGLSTVQ EV VGSLN++AAFGGLVAGKAAD LGRK   A+AC +F+ GAT MT++ +F  LL GR++TG+GVGC  VIAPVYITELAPPDVRG LVSLTDICIN+GI+ G
Sbjct:  110 VSGRPLVYLCAACSSLCSILLGYDVGVMSGAKEFIRPDLGLSTVQNEVMVGSLNIVAAFGGLVAGKAADRLGRKPTTALACVVFITGATMMTLSHTFWFLLLGRVVTGIGVGCAMVIAPVYITELAPPDVRGMLVSLTDICINVGIVFG 258          
BLAST of mRNA_P-wetherbeei_contig5129.3.1 vs. uniprot
Match: D8LJ49_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ49_ECTSI)

HSP 1 Score: 201 bits (512), Expect = 8.600e-59
Identity = 104/149 (69.80%), Postives = 128/149 (85.91%), Query Frame = 1
Query:    1 ISPRSLIWLCAICSSLTSVLLGYDVGVMSGAILYIKTTLGLSTVQQEVTVGSLNLIAAFGGLVAGKAADALGRKKAIAMACFIFMVGATTMTIARSFEMLLAGRIITGVGVGCGFVIAPVYITELAPPDVRGKLVSLTDICINLGILLG 447
            IS  +LI+LCA+CSSLTSVLLGYDVGVMS AIL I+  +GLS +Q E+ VGSLN+IAAFGGL+AGKA+DALGRK AIA+AC IF+ GA  MT++ ++  LL GR++TG+GVGCGFV+APVYITE+ PP +RGKLV+LTDI IN+GILLG
Sbjct:   86 ISATALIYLCALCSSLTSVLLGYDVGVMSAAILDIEEDMGLSPLQAEILVGSLNVIAAFGGLIAGKASDALGRKTAIAIACGIFITGAGGMTLSMTYAQLLTGRLLTGLGVGCGFVVAPVYITEITPPHIRGKLVALTDIMINIGILLG 234          
BLAST of mRNA_P-wetherbeei_contig5129.3.1 vs. uniprot
Match: A0A4D9D9C2_9STRA (MFS domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9C2_9STRA)

HSP 1 Score: 186 bits (473), Expect = 8.070e-54
Identity = 93/146 (63.70%), Postives = 118/146 (80.82%), Query Frame = 1
Query:   10 RSLIWLCAICSSLTSVLLGYDVGVMSGAILYIKTTLGLSTVQQEVTVGSLNLIAAFGGLVAGKAADALGRKKAIAMACFIFMVGATTMTIARSFEMLLAGRIITGVGVGCGFVIAPVYITELAPPDVRGKLVSLTDICINLGILLG 447
            R L++LC   +SLTS+LLGYDVGVMS A  Y+   L L++VQ EV +GSLNL+AA GGL+AGK AD  GR +AIA+AC IF+ G+  MT+A +F +LL GRIITG+GVGCGFVIAPVYI E+ PP++RG +VSLTD+CIN+GI+LG
Sbjct:   21 RRLVYLCGFVASLTSILLGYDVGVMSVARKYVDMQLSLTSVQSEVIMGSLNLVAALGGLIAGKTADRFGRNRAIALACLIFLTGSACMTLAWNFRVLLVGRIITGLGVGCGFVIAPVYIAEITPPEIRGLMVSLTDVCINVGIVLG 166          
BLAST of mRNA_P-wetherbeei_contig5129.3.1 vs. uniprot
Match: A0A835Z5D9_9STRA (General substrate transporter (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5D9_9STRA)

HSP 1 Score: 183 bits (464), Expect = 2.520e-53
Identity = 101/149 (67.79%), Postives = 116/149 (77.85%), Query Frame = 1
Query:    1 ISPRSLIWLCAICSSLTSVLLGYDVGVMSGAILYIKTTLGLSTVQQEVTVGSLNLIAAFGGLVAGKAADALGRKKAIAMACFIFMVGATTMTIARSFEMLLAGRIITGVGVGCGFVIAPVYITELAPPDVRGKLVSLTDICINLGILLG 447
            IS R L++LCA CSSL SVLLGYDVGVMSGA  YI+  L LS  Q  V VGSLNL+AA G L+AGKAADALGR+  IA+AC +F+VGA  M  + SF  LL GR++TGVGVG   ++AP+YI ELAPPDVRG LVSLTDI INLGILLG
Sbjct:    1 ISGRPLVYLCAACSSLCSVLLGYDVGVMSGAKEYIQPDLELSDSQTAVIVGSLNLVAALGALMAGKAADALGRRVTIALACTVFIVGAAMMAGSGSFGALLTGRVVTGVGVGAAMMVAPIYIAELAPPDVRGALVSLTDISINLGILLG 149          
BLAST of mRNA_P-wetherbeei_contig5129.3.1 vs. uniprot
Match: A0A6H5K3W8_9PHAE (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K3W8_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 2.510e-51
Identity = 89/149 (59.73%), Postives = 119/149 (79.87%), Query Frame = 1
Query:    1 ISPRSLIWLCAICSSLTSVLLGYDVGVMSGAILYIKTTLGLSTVQQEVTVGSLNLIAAFGGLVAGKAADALGRKKAIAMACFIFMVGATTMTIARSFEMLLAGRIITGVGVGCGFVIAPVYITELAPPDVRGKLVSLTDICINLGILLG 447
            +SP +++++ A  SSLTSVLLGYDVGV+SGAI YI+   GLST+Q+ + V SLNL+AA GGL+AG  +D LGRK++IA AC +F+ G+     A+SF +LL GRI+TG+GVGCGFV+APVYI E+ PP +RG+L SLTDI IN+GI++G
Sbjct:   59 LSPTAIVYMSAFVSSLTSVLLGYDVGVISGAIKYIQEDFGLSTLQKAIIVSSLNLVAAGGGLIAGSVSDTLGRKRSIAAACLVFITGSIIKIAAQSFGVLLLGRIVTGIGVGCGFVVAPVYIAEITPPHIRGRLTSLTDISINMGIVIG 207          
BLAST of mRNA_P-wetherbeei_contig5129.3.1 vs. uniprot
Match: A0A6H5JT77_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT77_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 3.400e-47
Identity = 87/126 (69.05%), Postives = 107/126 (84.92%), Query Frame = 1
Query:   70 DVGVMSGAILYIKTTLGLSTVQQEVTVGSLNLIAAFGGLVAGKAADALGRKKAIAMACFIFMVGATTMTIARSFEMLLAGRIITGVGVGCGFVIAPVYITELAPPDVRGKLVSLTDICINLGILLG 447
            DVGVMS AIL I+  +GLS +Q EV VGSLN+IAAFGGL+AGKA+DALGRK AIA+AC IF+ GA  MT++ ++  LL GR++TG+GVGCGFV+APVYITE+ PP +RGKLV+LTDI IN+GILLG
Sbjct:  210 DVGVMSAAILDIEEDMGLSPLQAEVLVGSLNVIAAFGGLIAGKASDALGRKTAIAIACGIFITGAGGMTLSMTYAQLLTGRLLTGLGVGCGFVVAPVYITEITPPHIRGKLVALTDIMINIGILLG 335          
BLAST of mRNA_P-wetherbeei_contig5129.3.1 vs. uniprot
Match: UPI001BF23599 (Uncharacterized protein n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001BF23599)

HSP 1 Score: 152 bits (385), Expect = 1.420e-42
Identity = 81/148 (54.73%), Postives = 107/148 (72.30%), Query Frame = 1
Query:    4 SPRSLIWLCAICSSLTSVLLGYDVGVMSGAILYIKTTLGLSTVQQEVTVGSLNLIAAFGGLVAGKAADALGRKKAIAMACFIFMVGATTMTIARSFEMLLAGRIITGVGVGCGFVIAPVYITELAPPDVRGKLVSLTDICINLGILLG 447
            + R+ +++CAI  SL SVLLGYDVGVMSGAIL+I+  L ++ VQ+EV VG L++I+  G L  GK +DA+GRK  IA A  +F  GA  MT+A +F +L+ GRI+ GVG+G G +IAPVYI E++P   RG L S  +I INLGILLG
Sbjct:   51 TTRNFVFVCAIFVSLNSVLLGYDVGVMSGAILFIQEDLKITEVQEEVLVGILSIISLLGSLAGGKTSDAIGRKWTIAFAAIVFQTGAAVMTLAPNFRVLIVGRILAGVGIGFGVMIAPVYIAEISPAVARGSLTSFPEIFINLGILLG 198          
BLAST of mRNA_P-wetherbeei_contig5129.3.1 vs. uniprot
Match: A0A2R6QX38_ACTCC (Polyol transporter like n=2 Tax=Actinidia TaxID=3624 RepID=A0A2R6QX38_ACTCC)

HSP 1 Score: 155 bits (391), Expect = 5.670e-42
Identity = 79/148 (53.38%), Postives = 108/148 (72.97%), Query Frame = 1
Query:    4 SPRSLIWLCAICSSLTSVLLGYDVGVMSGAILYIKTTLGLSTVQQEVTVGSLNLIAAFGGLVAGKAADALGRKKAIAMACFIFMVGATTMTIARSFEMLLAGRIITGVGVGCGFVIAPVYITELAPPDVRGKLVSLTDICINLGILLG 447
            S R  ++ CA+ +SL SVLLGYDVGVMSGAIL+I   L ++ VQ+EV VG L++++ FG L  G+ +DA+GRK  + +A F+F +GA  MTIA +F +L+ GR++ GVG+G G +IAPVYI E++P   RG L S  +I INLGILLG
Sbjct:   47 STRKYVFACAVFASLNSVLLGYDVGVMSGAILFIHEDLKITEVQEEVLVGCLSVVSLFGSLAGGRTSDAIGRKWTMGLAAFVFQIGAAIMTIAPTFHILMVGRLLAGVGIGFGVIIAPVYIVEISPTVARGSLTSFPEIFINLGILLG 194          
BLAST of mRNA_P-wetherbeei_contig5129.3.1 vs. uniprot
Match: A0A540KWU8_MALBA (MFS domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540KWU8_MALBA)

HSP 1 Score: 147 bits (372), Expect = 1.380e-41
Identity = 77/146 (52.74%), Postives = 106/146 (72.60%), Query Frame = 1
Query:   10 RSLIWLCAICSSLTSVLLGYDVGVMSGAILYIKTTLGLSTVQQEVTVGSLNLIAAFGGLVAGKAADALGRKKAIAMACFIFMVGATTMTIARSFEMLLAGRIITGVGVGCGFVIAPVYITELAPPDVRGKLVSLTDICINLGILLG 447
            R  +  CAI +SL  VLLGYDVGVMSGAI++I+  L ++ VQ+EV VG L++++ FG L  GK +D +GRK  +A+A  +F  GA TMT+A SFE+L+ GR++ G+G+G G ++APVYI E++P   RG L S  +I INLGILLG
Sbjct:   47 RKYVLACAIFASLNHVLLGYDVGVMSGAIIFIQEDLKITEVQEEVLVGILSIVSLFGSLGGGKTSDIIGRKWTMALAAVVFQAGAATMTLAPSFEILMVGRLLAGIGIGFGGMVAPVYIAEISPTIDRGSLTSFPEIFINLGILLG 192          
BLAST of mRNA_P-wetherbeei_contig5129.3.1 vs. uniprot
Match: A0A4U5PL44_POPAL (Mannitol transporter family protein n=1 Tax=Populus alba TaxID=43335 RepID=A0A4U5PL44_POPAL)

HSP 1 Score: 150 bits (380), Expect = 1.450e-41
Identity = 77/146 (52.74%), Postives = 106/146 (72.60%), Query Frame = 1
Query:   10 RSLIWLCAICSSLTSVLLGYDVGVMSGAILYIKTTLGLSTVQQEVTVGSLNLIAAFGGLVAGKAADALGRKKAIAMACFIFMVGATTMTIARSFEMLLAGRIITGVGVGCGFVIAPVYITELAPPDVRGKLVSLTDICINLGILLG 447
            R  +  CAI +SL SVLLGYDVGVMSGAI++I+  L ++ VQ+EV +G L++++ FG L  G+ +D +GRK  +A+A  IF  GA TMT+A SFE+L+ GR + G+G+G G +IAP+YI E++P   RG L S  +I INLGILLG
Sbjct:   52 RKYVLACAIFASLNSVLLGYDVGVMSGAIIFIQEDLKITEVQEEVLIGCLSILSLFGSLAGGRTSDIIGRKWTMALAAIIFQTGAATMTLAPSFEVLIIGRFLAGIGIGFGVMIAPIYIAEISPSVTRGSLTSFPEIFINLGILLG 197          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5129.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTG6_ECTSI1.370e-6070.47MFS domain-containing protein n=2 Tax=Ectocarpus T... [more]
D8LJ49_ECTSI8.600e-5969.80MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A4D9D9C2_9STRA8.070e-5463.70MFS domain-containing protein n=3 Tax=Monodopsidac... [more]
A0A835Z5D9_9STRA2.520e-5367.79General substrate transporter (Fragment) n=1 Tax=T... [more]
A0A6H5K3W8_9PHAE2.510e-5159.73MFS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6H5JT77_9PHAE3.400e-4769.05MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
UPI001BF235991.420e-4254.73Uncharacterized protein n=1 Tax=Carya illinoinensi... [more]
A0A2R6QX38_ACTCC5.670e-4253.38Polyol transporter like n=2 Tax=Actinidia TaxID=36... [more]
A0A540KWU8_MALBA1.380e-4152.74MFS domain-containing protein n=1 Tax=Malus baccat... [more]
A0A4U5PL44_POPAL1.450e-4152.74Mannitol transporter family protein n=1 Tax=Populu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5129contigP-wetherbeei_contig5129:3516..3962 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FTG6
PFAMsSugar_tr
Model size447
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons1
Evalue2.25e-61
EggNOG OGsKOG0254@1|root,KOG0254@2759|Eukaryota
Descriptionglucose import
Cds size447
COG categoryU
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186770.4787722-CDS-P-wetherbeei_contig5129:3515..39621683186770.4787722-CDS-P-wetherbeei_contig5129:3515..3962Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5129 3516..3962 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5129.3.1prot_P-wetherbeei_contig5129.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5129 3516..3962 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5129.3.1

>prot_P-wetherbeei_contig5129.3.1 ID=prot_P-wetherbeei_contig5129.3.1|Name=mRNA_P-wetherbeei_contig5129.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=149bp
ISPRSLIWLCAICSSLTSVLLGYDVGVMSGAILYIKTTLGLSTVQQEVTV
GSLNLIAAFGGLVAGKAADALGRKKAIAMACFIFMVGATTMTIARSFEML
LAGRIITGVGVGCGFVIAPVYITELAPPDVRGKLVSLTDICINLGILLG
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mRNA from alignment at P-wetherbeei_contig5129:3516..3962+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5129.3.1 ID=mRNA_P-wetherbeei_contig5129.3.1|Name=mRNA_P-wetherbeei_contig5129.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=447bp|location=Sequence derived from alignment at P-wetherbeei_contig5129:3516..3962+ (Phaeothamnion wetherbeei SAG_119_79)
ATCTCCCCGCGCTCCCTCATCTGGCTGTGCGCCATCTGCAGCAGCCTCAC GTCGGTCCTCCTCGGCTACGACGTCGGCGTCATGAGCGGCGCGATCCTCT ACATCAAAACGACGCTCGGTTTATCTACCGTCCAGCAGGAAGTCACCGTC GGCAGCCTGAATCTCATCGCCGCCTTTGGCGGGCTTGTGGCCGGCAAGGC CGCCGATGCGCTTGGCCGCAAGAAGGCCATCGCGATGGCCTGCTTCATCT TTATGGTCGGCGCGACGACGATGACCATCGCCCGCAGCTTTGAAATGCTT TTGGCCGGAAGGATCATCACTGGGGTCGGCGTCGGCTGCGGCTTCGTCAT CGCGCCGGTCTACATCACGGAGCTGGCGCCGCCGGACGTGCGCGGGAAGC TGGTATCGCTGACAGACATTTGCATCAACCTCGGTATCCTGCTCGGT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5129:3516..3962+

>mRNA_P-wetherbeei_contig5129.3.1 ID=mRNA_P-wetherbeei_contig5129.3.1|Name=mRNA_P-wetherbeei_contig5129.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=447bp|location=Sequence derived from alignment at P-wetherbeei_contig5129:3516..3962+ (Phaeothamnion wetherbeei SAG_119_79)
ATCTCCCCGCGCTCCCTCATCTGGCTGTGCGCCATCTGCAGCAGCCTCAC
GTCGGTCCTCCTCGGCTACGACGTCGGCGTCATGAGCGGCGCGATCCTCT
ACATCAAAACGACGCTCGGTTTATCTACCGTCCAGCAGGAAGTCACCGTC
GGCAGCCTGAATCTCATCGCCGCCTTTGGCGGGCTTGTGGCCGGCAAGGC
CGCCGATGCGCTTGGCCGCAAGAAGGCCATCGCGATGGCCTGCTTCATCT
TTATGGTCGGCGCGACGACGATGACCATCGCCCGCAGCTTTGAAATGCTT
TTGGCCGGAAGGATCATCACTGGGGTCGGCGTCGGCTGCGGCTTCGTCAT
CGCGCCGGTCTACATCACGGAGCTGGCGCCGCCGGACGTGCGCGGGAAGC
TGGTATCGCTGACAGACATTTGCATCAACCTCGGTATCCTGCTCGGT
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