mRNA_P-wetherbeei_contig51132.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig51132.1.1 vs. uniprot
Match: B8BRH1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BRH1_THAPS) HSP 1 Score: 59.7 bits (143), Expect = 4.860e-9 Identity = 28/54 (51.85%), Postives = 35/54 (64.81%), Query Frame = 1
Query: 1 STIAGGLTDVVLSTHLAEPDVASAMVPLHPMAVAGFGGLVANALQLVPWGTTDG 162
ST+ GG+ D +L + S M+ LHP A+AGFGGLV NAL L+P G TDG
Sbjct: 550 STLGGGIVDYLLGDGILSSPDPSEMIKLHPFAIAGFGGLVTNALSLLPIGNTDG 603
BLAST of mRNA_P-wetherbeei_contig51132.1.1 vs. uniprot
Match: A0A448Z9S2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z9S2_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 1.520e-7 Identity = 29/57 (50.88%), Postives = 36/57 (63.16%), Query Frame = 1
Query: 1 STIAGGLTDVVLSTHLAEPDVASA---MVPLHPMAVAGFGGLVANALQLVPWGTTDG 162
ST+ G + D +L L PD A VPLHP A+AG+ GL+ NAL L+P GTTDG
Sbjct: 805 STLGGAIIDAILPGSLYVPDGAPTGGIFVPLHPFALAGYVGLIVNALALLPIGTTDG 861
BLAST of mRNA_P-wetherbeei_contig51132.1.1 vs. uniprot
Match: A0A7S3P6Y7_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P6Y7_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 2.080e-7 Identity = 29/62 (46.77%), Postives = 41/62 (66.13%), Query Frame = 1
Query: 1 STIAGGLTDVVLSTH-LAEPD-------VASAMVPLHPMAVAGFGGLVANALQLVPWGTTDG 162
S++ GG+ D ++ L+ PD VA+ +PLHP+AVAGF GL+ NAL ++P GTTDG
Sbjct: 704 SSLGGGILDAIMGNGVLSVPDGALGTRAVATMTIPLHPVAVAGFIGLIVNALNVLPIGTTDG 765
BLAST of mRNA_P-wetherbeei_contig51132.1.1 vs. uniprot
Match: A0A6T8HS84_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8HS84_9STRA) HSP 1 Score: 52.8 bits (125), Expect = 2.530e-7 Identity = 26/57 (45.61%), Postives = 36/57 (63.16%), Query Frame = 1
Query: 1 STIAGGLTDVVLSTHLAE---PDVASAMVPLHPMAVAGFGGLVANALQLVPWGTTDG 162
ST+A GL D VL + E + +VPL P A+AGF G++ NAL ++P+G TDG
Sbjct: 63 STLASGLVDSVLGSGFVEGFQSESEGKLVPLSPFAIAGFYGMIVNALSMIPFGKTDG 119
BLAST of mRNA_P-wetherbeei_contig51132.1.1 vs. uniprot
Match: A0A7S2PW85_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PW85_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 7.220e-7 Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 1
Query: 1 STIAGGLTDVVLSTH-LAEPDVASAMVPLHPMAVAGFGGLVANALQLVPWGTTDG 162
S + GG + +L L P+ A+ ++ LHP A+AGFGGLV NAL L+P G TDG
Sbjct: 297 SALGGGAIEYLLGDGILNSPNPAADLIKLHPYAIAGFGGLVTNALSLLPIGNTDG 351
BLAST of mRNA_P-wetherbeei_contig51132.1.1 vs. uniprot
Match: A0A7S0UIY1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UIY1_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 7.260e-7 Identity = 28/57 (49.12%), Postives = 36/57 (63.16%), Query Frame = 1
Query: 1 STIAGGLTDVVLSTHLAEPD---VASAMVPLHPMAVAGFGGLVANALQLVPWGTTDG 162
ST+ G + D V+ L P+ A +PLHP AVAG+ GL+ NAL L+P GTTDG
Sbjct: 462 STLGGAIIDNVIPGSLYVPEGAPTAGITIPLHPYAVAGYVGLIVNALALLPVGTTDG 518
BLAST of mRNA_P-wetherbeei_contig51132.1.1 vs. uniprot
Match: A0A1Z5KA79_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KA79_FISSO) HSP 1 Score: 51.2 bits (121), Expect = 4.770e-6 Identity = 28/62 (45.16%), Postives = 36/62 (58.06%), Query Frame = 1
Query: 1 STIAGGLTDVVLSTH--------LAEPDVASAMVPLHPMAVAGFGGLVANALQLVPWGTTDG 162
ST+ GG+ D L L VA +PLHP+A+AG+ GL+ NAL L+P GTTDG
Sbjct: 667 STLGGGIIDYFLGGGALYVPEGALGTSAVAQMTIPLHPIALAGYIGLIVNALSLLPIGTTDG 728
BLAST of mRNA_P-wetherbeei_contig51132.1.1 vs. uniprot
Match: B7FUA2_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FUA2_PHATC) HSP 1 Score: 51.2 bits (121), Expect = 4.770e-6 Identity = 28/62 (45.16%), Postives = 38/62 (61.29%), Query Frame = 1
Query: 1 STIAGGLTDVVLSTH--------LAEPDVASAMVPLHPMAVAGFGGLVANALQLVPWGTTDG 162
ST+ GG+ + +L + L VA M+PLHP+AVAG+ LV NAL ++P GTTDG
Sbjct: 690 STLGGGIIESMLGSGALSVPGGALGTQAVAQMMIPLHPVAVAGYISLVLNALAMLPVGTTDG 751
BLAST of mRNA_P-wetherbeei_contig51132.1.1 vs. uniprot
Match: A0A7S2UJA7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UJA7_9STRA) HSP 1 Score: 50.4 bits (119), Expect = 8.940e-6 Identity = 25/55 (45.45%), Postives = 36/55 (65.45%), Query Frame = 1
Query: 1 STIAGGLTDVVLSTH-LAEPDVASAMVPLHPMAVAGFGGLVANALQLVPWGTTDG 162
S++ G+ +L + L PD A+A V LHP A+AG+ G++ NAL L+P G TDG
Sbjct: 697 SSLGAGMIQWLLGSGILLAPDPATATVSLHPFAIAGYAGIIINALALLPIGNTDG 751
BLAST of mRNA_P-wetherbeei_contig51132.1.1 vs. uniprot
Match: A0A1Z5KRD3_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KRD3_FISSO) HSP 1 Score: 49.7 bits (117), Expect = 1.670e-5 Identity = 27/62 (43.55%), Postives = 35/62 (56.45%), Query Frame = 1
Query: 1 STIAGGLTDVVLSTH--------LAEPDVASAMVPLHPMAVAGFGGLVANALQLVPWGTTDG 162
ST+ GG+ D L L A +PLHP+A+AG+ GL+ NAL L+P GTTDG
Sbjct: 666 STLGGGIIDYFLGGGALYIPEGALGTTAAAQMTIPLHPIALAGYIGLIVNALSLLPIGTTDG 727 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51132.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig51132.1.1 >prot_P-wetherbeei_contig51132.1.1 ID=prot_P-wetherbeei_contig51132.1.1|Name=mRNA_P-wetherbeei_contig51132.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=54bp STIAGGLTDVVLSTHLAEPDVASAMVPLHPMAVAGFGGLVANALQLVPWGback to top mRNA from alignment at P-wetherbeei_contig51132:157..318- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig51132.1.1 ID=mRNA_P-wetherbeei_contig51132.1.1|Name=mRNA_P-wetherbeei_contig51132.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=162bp|location=Sequence derived from alignment at P-wetherbeei_contig51132:157..318- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig51132:157..318- >mRNA_P-wetherbeei_contig51132.1.1 ID=mRNA_P-wetherbeei_contig51132.1.1|Name=mRNA_P-wetherbeei_contig51132.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=162bp|location=Sequence derived from alignment at P-wetherbeei_contig51132:157..318- (Phaeothamnion wetherbeei SAG_119_79)back to top |