mRNA_P-wetherbeei_contig51.7.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig51.7.1 vs. uniprot
Match: A0A6H5KVU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU7_9PHAE) HSP 1 Score: 153 bits (387), Expect = 2.070e-36 Identity = 83/225 (36.89%), Postives = 117/225 (52.00%), Query Frame = 3
Query: 12 FSWAGLLRQAGMERTPEALARYYVESFLPLCVEICHP---------AAAPAASAAAG---------------------------------------------------EP-SYFMDPTRPVADHGPVARGMAYVFLRRQQLLRCCRFVIGRRVQALAAWTAG-PTAGVRAQDRALPAWWCPWVHDVALMAGSVRHGLLTVNAMREDPVLPLGPAAVTEHVRKIFL 500
F+W ++ +A + RTP+ +A YY++ FLPLCVE+C P A+A AA +A G +P S+F DPTR ++H PVARG+AY+FL+RQQLLR RF + +R A+A W+ +A ++ LP WWCPW+HD+ LMAG VRHG + +NAMR D LPL P AV +H+ + +
Sbjct: 2318 FTWESIIARANLSRTPDDVAHYYLKHFLPLCVELCRPGAGAGGHKDASATAADSADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDATDPLSFFPDPTRDASEHSPVARGVAYIFLKRQQLLRTIRFFLHKRKDAVAQWSRNVQSAQIKHDKEGLPLWWCPWIHDLGLMAGCVRHGFMNINAMRGDSALPLNPGAVNDHITRALV 2542
BLAST of mRNA_P-wetherbeei_contig51.7.1 vs. uniprot
Match: D8LDU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU9_ECTSI) HSP 1 Score: 134 bits (337), Expect = 6.220e-30 Identity = 58/114 (50.88%), Postives = 79/114 (69.30%), Query Frame = 3
Query: 162 SYFMDPTRPVADHGPVARGMAYVFLRRQQLLRCCRFVIGRRVQALAAWTAG-PTAGVRAQDRALPAWWCPWVHDVALMAGSVRHGLLTVNAMREDPVLPLGPAAVTEHVRKIFL 500
S+F DPTR ++H PVARG+AY+FL+RQQLLR RF + +R A+A W+ +A ++ LP WWCPW+HD+ LMAG VRHG + +NAMR D LPL P AV +H+ + +
Sbjct: 2393 SFFPDPTRDASEHSPVARGVAYIFLKRQQLLRTIRFFLHKRKDAVAQWSRNVQSAQIKHDKEGLPMWWCPWIHDLGLMAGCVRHGFMNINAMRGDSALPLNPGAVNDHITRALV 2506
BLAST of mRNA_P-wetherbeei_contig51.7.1 vs. uniprot
Match: A0A7S4D9Z2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9Z2_HETAK) HSP 1 Score: 127 bits (320), Expect = 8.340e-29 Identity = 68/185 (36.76%), Postives = 101/185 (54.59%), Query Frame = 3
Query: 12 FSWAGLLRQAGME--RTPEALARYYVESFLPLCVEICHPAAA----PAASAAAGEPSYFMDPTRPVADHGPVARGMAYVFLRRQQLLRCCRFVIGRRVQALAAWTAGP--TAGVRAQDRA---------------LPAWWCPWVHDVALMAGSVRHGLLTVNAMREDPVLPLGPAAVTEHVRKIF 497
++W +++AG++ +TPE +A +Y + FLP C+ +CHP A S P++F DP RP+ +H VA G AY+FL RQQ+LR R+ I R+ +L + P AG+ A A +P WWCPW+HD AL+ G ++HG L +N +R D LPL + +HV F
Sbjct: 135 YAWEDFVKKAGLQQTKTPEQVASFYTDCFLPTCLALCHPGAPIPEFHPLSNPYPPPTHFPDPARPIEEHSQVAAGSAYLFLCRQQILRTLRYAINRKPDSLLKFLKAPGGLAGMGAPAAAAAPSSAEGAESAVDGVPFWWCPWIHDYALVLGCLKHGYLCLNLIRSDKTLPLNQEKIQKHVLLSF 319
BLAST of mRNA_P-wetherbeei_contig51.7.1 vs. uniprot
Match: A0A7S2GE25_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GE25_9STRA) HSP 1 Score: 114 bits (284), Expect = 2.620e-23 Identity = 96/263 (36.50%), Postives = 126/263 (47.91%), Query Frame = 3
Query: 168 FMDPTRPVADHGPVARGMAYVFLRRQQLLRCCRFVIGRRVQALAAWTAGPTAGVRAQDRALPAWWCPWVHDVALMAGSVRHGLLTVNAMREDPVLPLGPAAVTEHVRKIFLRRPASSSLSSSWAGAAAGTNHITGQPKSFGNGNGGDGAXXXXXXXXXXXXXXXXXXXXXV-TVKSEHG--------------HSGGVGGVDDGLQPQPATVGLFAPDAPGVAAWVQDMGMQFPPRRALEDRLYRVLEEINRGLPLAHPLRLR 911
+ DP + +H P+AR +A FLR QQLLR RFV+ RR A P V R +P WWCPWVHD+AL+ G+V HGLL V+ +R DP+LP A V HVR++FL A+ + T + PK + XXXXXXXXXXX T ++ G H VGG+ L A G+F WV QFP ++ LE RL R+ E+ + LP +PLR+R
Sbjct: 528 YPDPCFSLEEHTPLARRLALRFLRHQQLLRAVRFVLARRADAAMTMLRSP---VGRDVRGMPVWWCPWVHDLALLVGAVHHGLLQVDLLRGDPILPTERATVQRHVRRVFLEGCATRAPRVIVVHTNPTTGELVRDPKEALDSEAAXXXXXXXXXXXXXXQDDPEASSRETDTAGTDQGSETESETNEIKVVDHKLLVGGLTGMLG---AAAGVFNSQK-HADQWVTAQAKQFPSKKVLEARLERICVEMTKLLPFGNPLRVR 783
BLAST of mRNA_P-wetherbeei_contig51.7.1 vs. uniprot
Match: A0A836CI28_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI28_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 1.200e-14 Identity = 35/69 (50.72%), Postives = 47/69 (68.12%), Query Frame = 3
Query: 348 LPAWWCPWVHDVALMAGSVRHGLLTVNAMREDPVLPLGPAAVTEHVRKIFLRRPASSSLSSSWAGAAAG 554
LP WWCPW+HD+A+M G ++HGLL VNAMR D LPL PA+V+ H+ + + A +S S G+A G
Sbjct: 1 LPIWWCPWIHDLAVMVGCLKHGLLNVNAMRTDASLPLTPASVSHHIMRSLVTPVAGGRMSISGLGSARG 69
BLAST of mRNA_P-wetherbeei_contig51.7.1 vs. uniprot
Match: A0A485KXH5_9STRA (Aste57867_12909 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KXH5_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 8.640e-13 Identity = 55/168 (32.74%), Postives = 83/168 (49.40%), Query Frame = 3
Query: 12 FSWAGLLRQAGMERTPEALARYYVESFLPLCVEIC-----HPAAAPAASAAAGEPSYFMDPTRPVADHGPVARGMAYVFLRRQQLLRCCRFVIGRRVQALAAWTAGPTAGVRAQDRALPAWWCPWVHDVALMAGSVRHGLLTVNAMREDPVLPLGPAAVTEHVRKIFL 500
+SW L+ A + ++ RY + L C E+ PA A A A E F+DP + + HGP A+ MA++ LRR QL R +++ + AL A + +P WWCPW+HD AL+ G +RHG+ A+ L + AV HVR++F+
Sbjct: 1424 WSWYWLVTSAHIYKSAMRAQRYVYDRVLAKCKELLLKDSTTPAPAAAVVARPNE-IQFVDPYQAASLHGPKAKQMAFLLLRRTQLYRTVSYLLHHDIDALDTKLRSGDAFLTDD---MPRWWCPWIHDRALLDGMLRHGIGAFLALHAHGALHV--EAVYHHVRRVFV 1585
BLAST of mRNA_P-wetherbeei_contig51.7.1 vs. uniprot
Match: A0A2D4C5P9_PYTIN (Chromodomain-helicase-DNA-binding protein, putative n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5P9_PYTIN) HSP 1 Score: 80.5 bits (197), Expect = 2.710e-12 Identity = 55/170 (32.35%), Postives = 80/170 (47.06%), Query Frame = 3
Query: 12 FSWAGLLRQAGMERTPEALARYYVESFLPLCVEICHPAAAP------AASAAAGEPSYFMDPTRPVADHGPVARGMAYVFLRRQQLLRCCRFVIGRRVQALAAWTAGPTAGVRAQDRALPAWWCPWVHDVALMAGSVRHGLLTVNAMREDPVLPLGPAAVTEHVRKIFLR 503
SW ++ + +T R++ + FL C EI P A + A F+D V HG AR +A+V LRR QLL V+ R AL A+ +G A +P WWCPW+HD+A++ G R+G+ M D LP A EH+R+++ R
Sbjct: 1447 LSWLNFVQWGRLNKTATMAQRFFEDRFLAKCHEIAAMKVDPLGSDQRAMALADLVGIEFVDAHEGVLAHGLKARNVAWVTLRRMQLLDDVLDVLTHRGTALLAYLR---SGSAALVDGMPVWWCPWIHDLAVLHGMARYGVSGWERMLCDRALPFHREAREEHIREVWTR 1613
BLAST of mRNA_P-wetherbeei_contig51.7.1 vs. uniprot
Match: F0W4R0_9STRA (KIAA1416 protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W4R0_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 1.470e-11 Identity = 54/169 (31.95%), Postives = 76/169 (44.97%), Query Frame = 3
Query: 12 FSWAGLLRQAGMERTPEALARYYVESFLPLCVEICHPAAAPAAS------AAAGEPSYFMDPTRPVADHGPVARGMAYVFLRRQQLLRCCRFVIGRRVQALAAWTAGPTAGVRAQDRALPAWWCPWVHDVALMAGSVRHGLLTVNAMREDPVLPLGPAAVTEHVRKIFL 500
SW ++R + +T YY + +L CVE+ P AS A ++D V HG AR +A++ LRR QLLR V+ R + L + V+ +P WWCPWVHD AL G R+G+ + D LP A H+R+ FL
Sbjct: 1478 LSWMNIVRWGNLNKTAAQARAYYDQKYLLRCVEVAEMKVDPLASDQRAISLAEMVGMEYVDAYEGVLAHGLKARNLAWITLRRSQLLRDVLRVVEDRPRMLKFLESRSPELVKE----MPIWWCPWVHDAALFHGIARYGVCAWEKIVLDYRLPFHLRAREAHMRRFFL 1642
BLAST of mRNA_P-wetherbeei_contig51.7.1 vs. uniprot
Match: A0A024GDK3_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GDK3_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.960e-11 Identity = 52/174 (29.89%), Postives = 79/174 (45.40%), Query Frame = 3
Query: 12 FSWAGLLRQAGMERTPEALARYYVESFLPLCVEICHPAAAP------AASAAAGEPSYFMDPTRPVADHGPVARGMAYVFLRRQQLLR-CCRFVIGRRVQALAAWTAGPTAGVRAQDRALPAWWCPWVHDVALMAGSVRHGLLTVNAMREDPVLPLGPAAVTEHVRKIFLRRPA 512
SW ++R + +T YY + +L C+E+ P AAS A ++D + HG AR +A++ LRR QLLR R V +++ + +G V +P WWCPW+HD AL G R+G+ + D LP A H+ + FL+ A
Sbjct: 1500 LSWMNIVRWGNLNKTATQAQAYYDQKYLSRCIEVAEMKVDPLACDQRAASLADMVGMEYVDAYEGILAHGLKARNLAWITLRRSQLLRDVLRVVTDGKLRLMRYLHSGSIHLVEN----MPIWWCPWIHDAALFHGIARYGVYAWEKIVLDYRLPFHVRARKAHMERYFLKEDA 1669
BLAST of mRNA_P-wetherbeei_contig51.7.1 vs. uniprot
Match: A0A7S1B9C3_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B9C3_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.050e-10 Identity = 60/186 (32.26%), Postives = 83/186 (44.62%), Query Frame = 3
Query: 27 LLRQAGMER--TPEALARYYVESFLPLCVEICHPAAAPAASAAAGEP-----------------------SYFMDPTRPVADHGPVARGMAYVFLRRQQLLRCCRFVIGRRVQA--LAAWTAGPTAGVRAQDRALPAWWCPWVHDVALMAGSVRHGLLTVNAMREDPVLPLGPAAVTEHVRKIFLR 503
L+R AG E T + +Y + LP CV +C S+ P S DP P++ HG A A V LRR +LL+C R++ G V L A+ G +R LP WWCPWVHD+AL+ G+ GLL++ MR LG A +T+ + F+R
Sbjct: 1427 LMRHAGSEEEMTGAKVIKYLEDELLPHCVRLCLQGVRGKWSSKTELPHNLKNDDLGKIVSIHDHELRTQLSPLPDPWLPLSHHGDGAITRALVLLRRVRLLKCVRWITGGNVPRAKLVAFLRGTF--MRRSVIELPVWWCPWVHDLALLVGTASFGLLSLKKMRTPG---LGIAQITKPAIEKFIR 1607 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig51.7.1 >prot_P-wetherbeei_contig51.7.1 ID=prot_P-wetherbeei_contig51.7.1|Name=mRNA_P-wetherbeei_contig51.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=293bp MERTPEALARYYVESFLPLCVEICHPAAAPAASAAAGEPSYFMDPTRPVAback to top mRNA from alignment at P-wetherbeei_contig51:12673..14022- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig51.7.1 ID=mRNA_P-wetherbeei_contig51.7.1|Name=mRNA_P-wetherbeei_contig51.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1350bp|location=Sequence derived from alignment at P-wetherbeei_contig51:12673..14022- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig51:12673..14022- >mRNA_P-wetherbeei_contig51.7.1 ID=mRNA_P-wetherbeei_contig51.7.1|Name=mRNA_P-wetherbeei_contig51.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=879bp|location=Sequence derived from alignment at P-wetherbeei_contig51:12673..14022- (Phaeothamnion wetherbeei SAG_119_79)back to top |