mRNA_P-wetherbeei_contig51.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig51.2.1 vs. uniprot
Match: UPI000B90976D (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=1 Tax=Folsomia candida TaxID=158441 RepID=UPI000B90976D) HSP 1 Score: 134 bits (337), Expect = 4.600e-33 Identity = 83/190 (43.68%), Postives = 104/190 (54.74%), Query Frame = 3
Query: 474 ACVISPSECKTCTYVSFFLQDAYFCVKEVDLGMAADIGTLQRLPRVVGGDSLARELVFSARRLPAAEAASCGLVSRVLPSKEETCAAALALAAEIATKSPVLCCFPLPRFFLPFSFKITCHRLSLPRSASPALPLFLSSFISLSVASLLAPTVAIQGSKVNLNYARDHSTGDALKYQALWNAAMLQSADV 1043
AC+ + T + + QDA+F VKEVD+GMAAD+GTLQRLP+VVG DSL REL +SAR++ A EA +CGLVSRV P K AAL +AA I TKSPV A+QG+KV+L Y+RDHS + L+YQA+WNAAMLQS D+
Sbjct: 155 ACIGGGVDLITAADIRYCTQDAWFQVKEVDIGMAADVGTLQRLPKVVGNDSLVRELCYSARKMMADEAVTCGLVSRVFPDKTSMIDAALQMAATIGTKSPV----------------------------------------------------AVQGTKVHLIYSRDHSVAEGLQYQAIWNAAMLQSEDL 292
BLAST of mRNA_P-wetherbeei_contig51.2.1 vs. uniprot
Match: A0A835YPD0_9STRA (ClpP/crotonase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPD0_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.840e-32 Identity = 80/171 (46.78%), Postives = 99/171 (57.89%), Query Frame = 3
Query: 531 QDAYFCVKEVDLGMAADIGTLQRLPRVVGGDSLARELVFSARRLPAAEAASCGLVSRVLPSKEETCAAALALAAEIATKSPVLCCFPLPRFFLPFSFKITCHRLSLPRSASPALPLFLSSFISLSVASLLAPTVAIQGSKVNLNYARDHSTGDALKYQALWNAAMLQSADV 1043
+DA+FCVKEVD+G+ AD+GTLQ LP+ VG DSLARELV++AR+LPA+EA SCGLVS+VL + AAL LA IA KSPV A+QG+K++LNYARDHS D+LK+QALWNA ML+S DV
Sbjct: 133 RDAHFCVKEVDIGICADMGTLQLLPKAVGSDSLARELVYTARKLPASEALSCGLVSKVLDDAAQMREAALELATTIAGKSPV----------------------------------------------------AVQGTKLHLNYARDHSVADSLKHQALWNAIMLRSKDV 251
BLAST of mRNA_P-wetherbeei_contig51.2.1 vs. uniprot
Match: UPI0005F40062 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=1 Tax=Mandrillus leucophaeus TaxID=9568 RepID=UPI0005F40062) HSP 1 Score: 129 bits (324), Expect = 2.250e-32 Identity = 82/201 (40.80%), Postives = 107/201 (53.23%), Query Frame = 3
Query: 453 PSPLLLV---ACVISPSECKTCTYVSFFLQDAYFCVKEVDLGMAADIGTLQRLPRVVGGDSLARELVFSARRLPAAEAASCGLVSRVLPSKEETCAAALALAAEIATKSPVLCCFPLPRFFLPFSFKITCHRLSLPRSASPALPLFLSSFISLSVASLLAPTVAIQGSKVNLNYARDHSTGDALKYQALWNAAMLQSADVA 1046
P P++ C+ + T + + QDA+F VKEVD+G+AAD+GTLQRLP+V+G SL EL F+AR++ A EA CGLVSRVLP KE AALALAAEI++KSPV A+QG+KVNL Y+RDHS ++L Y A WN +MLQ+ D+A
Sbjct: 31 PKPVIAAIHGGCIGGGVDLITACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGCGLVSRVLPDKEVMLDAALALAAEISSKSPV----------------------------------------------------AVQGTKVNLLYSRDHSVAESLNYVASWNMSMLQTQDIA 179
BLAST of mRNA_P-wetherbeei_contig51.2.1 vs. uniprot
Match: A0A7J8CFX2_ROUAE (Enoyl-CoA hydratase 1 n=4 Tax=Rousettus aegyptiacus TaxID=9407 RepID=A0A7J8CFX2_ROUAE) HSP 1 Score: 131 bits (329), Expect = 4.630e-32 Identity = 86/200 (43.00%), Postives = 106/200 (53.00%), Query Frame = 3
Query: 453 PSPLLLV---ACVISPSECKTCTYVSFFLQDAYFCVKEVDLGMAADIGTLQRLPRVVGGDSLARELVFSARRLPAAEAASCGLVSRVLPSKEETCAAALALAAEIATKSPVLCCFPLPRFFLPFSFKITCHRLSLPRSASPALPLFLSSFISLSVASLLAPTVAIQGSKVNLNYARDHSTGDALKYQALWNAAMLQSADV 1043
P P++ +CV + T + + QDA+F VKEVDLG+AAD+GTLQRLPRV+G SL EL F+AR++ A EA S GLVSRV P KE T AALALAAEIATKSPV A+QG+KVNL Y+RDHS + L + A WN +MLQS D+
Sbjct: 126 PKPVIAAIHGSCVGGGVDLITACDIRYCAQDAFFQVKEVDLGLAADVGTLQRLPRVIGNQSLVNELSFTARKMMADEALSSGLVSRVFPDKEATFDAALALAAEIATKSPV----------------------------------------------------AVQGTKVNLLYSRDHSVAEGLNHMASWNMSMLQSQDI 273
BLAST of mRNA_P-wetherbeei_contig51.2.1 vs. uniprot
Match: A0A1S3K0E9_LINUN (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3K0E9_LINUN) HSP 1 Score: 129 bits (324), Expect = 3.410e-31 Identity = 83/204 (40.69%), Postives = 112/204 (54.90%), Query Frame = 3
Query: 453 PSPLLLV---ACVISPSECKTCTYVSFFLQDAYFCVKEVDLGMAADIGTLQRLPRVVGGDSLARELVFSARRLPAAEAASCGLVSRVLPSKEETCAAALALAAEIATKSPVLCCFPLPRFFLPFSFKITCHRLSLPRSASPALPLFLSSFISLSVASLLAPTVAIQGSKVNLNYARDHSTGDALKYQALWNAAMLQSADVAAAS 1055
P P+++ ACV + T + + QDA+F VKEVD+G+AAD+GTLQRLP+VVG DSLAREL ++AR++ A EA CGLVSR+LP +E T AA+ AA IA+KSP+ A+QGSKV++ Y+RDHS + L++ A WN+AMLQS DV A+
Sbjct: 144 PKPVIVAVHNACVGGGIDLITACDIRYCSQDAWFQVKEVDVGLAADVGTLQRLPKVVGNDSLARELAYTARKMMADEAMRCGLVSRILPDRESTIEAAIETAALIASKSPI----------------------------------------------------AVQGSKVSIVYSRDHSVQEGLEHIACWNSAMLQSEDVMTAA 295
BLAST of mRNA_P-wetherbeei_contig51.2.1 vs. uniprot
Match: A0A7K8NX74_CASCA (ECH1 protein (Fragment) n=1 Tax=Casuarius casuarius TaxID=8787 RepID=A0A7K8NX74_CASCA) HSP 1 Score: 124 bits (312), Expect = 1.820e-30 Identity = 80/200 (40.00%), Postives = 102/200 (51.00%), Query Frame = 3
Query: 453 PSPLLLV---ACVISPSECKTCTYVSFFLQDAYFCVKEVDLGMAADIGTLQRLPRVVGGDSLARELVFSARRLPAAEAASCGLVSRVLPSKEETCAAALALAAEIATKSPVLCCFPLPRFFLPFSFKITCHRLSLPRSASPALPLFLSSFISLSVASLLAPTVAIQGSKVNLNYARDHSTGDALKYQALWNAAMLQSADV 1043
P P++ AC+ + T + + QDA+F VKEVD+G+AAD+GTLQRLP++VG SL EL F+AR+L A EA SCGLVSRV P K AL LAA +A+KSPV A+QG+KVNL YARDH + L+Y A WN +MLQ+ DV
Sbjct: 44 PKPVIAAVHGACIGGGVDLVTACDIRYCSQDAWFQVKEVDIGLAADVGTLQRLPKIVGSQSLVNELAFTARKLTAPEALSCGLVSRVFPDKAALLQGALELAATVASKSPV----------------------------------------------------AVQGTKVNLVYARDHPVPEGLRYAATWNMSMLQTEDV 191
BLAST of mRNA_P-wetherbeei_contig51.2.1 vs. uniprot
Match: E9H131_DAPPU (Uncharacterized protein n=5 Tax=Daphnia TaxID=6668 RepID=E9H131_DAPPU) HSP 1 Score: 126 bits (317), Expect = 2.110e-30 Identity = 80/189 (42.33%), Postives = 99/189 (52.38%), Query Frame = 3
Query: 477 CVISPSECKTCTYVSFFLQDAYFCVKEVDLGMAADIGTLQRLPRVVGGDSLARELVFSARRLPAAEAASCGLVSRVLPSKEETCAAALALAAEIATKSPVLCCFPLPRFFLPFSFKITCHRLSLPRSASPALPLFLSSFISLSVASLLAPTVAIQGSKVNLNYARDHSTGDALKYQALWNAAMLQSADV 1043
C+ + T + F QD +F +KEV++G+AAD+GTLQRLP+V+G DSL REL ++AR++ A EAA GLVSRVLP K+ AAL A+ IA KSPV AIQGSK NLNYARDHS + L Y A WNAAMLQS D+
Sbjct: 130 CIGGGVDLVTAADIRFCTQDTFFQIKEVEIGLAADVGTLQRLPKVIGSDSLVRELAYTARKMFADEAAQAGLVSRVLPDKDSLLKAALETASSIAGKSPV----------------------------------------------------AIQGSKHNLNYARDHSIEEGLSYMATWNAAMLQSEDL 266
BLAST of mRNA_P-wetherbeei_contig51.2.1 vs. uniprot
Match: UPI0018892641 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=UPI0018892641) HSP 1 Score: 125 bits (314), Expect = 3.130e-30 Identity = 80/190 (42.11%), Postives = 99/190 (52.11%), Query Frame = 3
Query: 474 ACVISPSECKTCTYVSFFLQDAYFCVKEVDLGMAADIGTLQRLPRVVGGDSLARELVFSARRLPAAEAASCGLVSRVLPSKEETCAAALALAAEIATKSPVLCCFPLPRFFLPFSFKITCHRLSLPRSASPALPLFLSSFISLSVASLLAPTVAIQGSKVNLNYARDHSTGDALKYQALWNAAMLQSADV 1043
AC+ + T + + DAYF VKEVDLG+AAD+GTLQRLPRV+G SL ELVF+AR++ AAEA GLVSRV P K + AAAL LA +IA+KSPV A+QGSKV+L Y+RDH + L+Y A WN MLQS D+
Sbjct: 103 ACIGGGVDMITACDIRYCTSDAYFQVKEVDLGLAADVGTLQRLPRVIGSASLVNELVFTARKMQAAEAHQAGLVSRVFPDKAQMMAAALDLAKQIASKSPV----------------------------------------------------AVQGSKVHLVYSRDHGVNEGLRYMACWNMCMLQSEDL 240
BLAST of mRNA_P-wetherbeei_contig51.2.1 vs. uniprot
Match: UPI0019557D40 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like n=1 Tax=Pimephales promelas TaxID=90988 RepID=UPI0019557D40) HSP 1 Score: 122 bits (305), Expect = 8.510e-30 Identity = 76/200 (38.00%), Postives = 103/200 (51.50%), Query Frame = 3
Query: 453 PSPLLLVA---CVISPSECKTCTYVSFFLQDAYFCVKEVDLGMAADIGTLQRLPRVVGGDSLARELVFSARRLPAAEAASCGLVSRVLPSKEETCAAALALAAEIATKSPVLCCFPLPRFFLPFSFKITCHRLSLPRSASPALPLFLSSFISLSVASLLAPTVAIQGSKVNLNYARDHSTGDALKYQALWNAAMLQSADV 1043
P P+++ C+ + T + QDA+F +KEVD+G+AAD+GTLQRLP+V+G SL EL F+AR++ A EA SCGLVSRV P KE A AL +A EIA+KSPV +QG+KVNL Y+RDHS ++L Y + WN +MLQ+ D+
Sbjct: 14 PKPVIVAVHGGCIGGGVDLITACDIRLCTQDAWFQIKEVDIGLAADVGTLQRLPKVIGSRSLVNELAFTARKMHADEAKSCGLVSRVFPDKEAMMAGALEMAGEIASKSPV----------------------------------------------------GVQGTKVNLLYSRDHSVAESLDYMSTWNMSMLQTQDL 161
BLAST of mRNA_P-wetherbeei_contig51.2.1 vs. uniprot
Match: A0A164L7M7_9CRUS (Delta-Delta-dienoyl-CoA isomerase n=4 Tax=Daphnia magna TaxID=35525 RepID=A0A164L7M7_9CRUS) HSP 1 Score: 125 bits (314), Expect = 9.030e-30 Identity = 80/193 (41.45%), Postives = 101/193 (52.33%), Query Frame = 3
Query: 477 CVISPSECKTCTYVSFFLQDAYFCVKEVDLGMAADIGTLQRLPRVVGGDSLARELVFSARRLPAAEAASCGLVSRVLPSKEETCAAALALAAEIATKSPVLCCFPLPRFFLPFSFKITCHRLSLPRSASPALPLFLSSFISLSVASLLAPTVAIQGSKVNLNYARDHSTGDALKYQALWNAAMLQSADVAAAS 1055
C+ + T + F QDA+F +KEVD+G+AAD+GTLQRLP+V+G DSL REL ++AR++ A EAA GLVSRVL KE AL +A+ IA KSPV A+QGSK NLNYARDHS + L Y +WNAAMLQS D+ A+
Sbjct: 151 CIGGGVDLITAADIRFCTQDAFFQIKEVDIGLAADVGTLQRLPKVIGSDSLVRELAYTARKMFADEAAQAGLVSRVLSDKEIMLKVALEIASAIADKSPV----------------------------------------------------AVQGSKHNLNYARDHSIEEGLNYMVIWNAAMLQSEDLRVAA 291 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig51.2.1 >prot_P-wetherbeei_contig51.2.1 ID=prot_P-wetherbeei_contig51.2.1|Name=mRNA_P-wetherbeei_contig51.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=188bp MQNMYICLIFPSGRLLLRKRSRPRHGRRHRHAAAPATGGRRRQPRPRACLback to top mRNA from alignment at P-wetherbeei_contig51:5756..7680+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig51.2.1 ID=mRNA_P-wetherbeei_contig51.2.1|Name=mRNA_P-wetherbeei_contig51.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1925bp|location=Sequence derived from alignment at P-wetherbeei_contig51:5756..7680+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig51:5756..7680+ >mRNA_P-wetherbeei_contig51.2.1 ID=mRNA_P-wetherbeei_contig51.2.1|Name=mRNA_P-wetherbeei_contig51.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=564bp|location=Sequence derived from alignment at P-wetherbeei_contig51:5756..7680+ (Phaeothamnion wetherbeei SAG_119_79)back to top |