mRNA_P-wetherbeei_contig21583.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig21583.1.1
Unique NamemRNA_P-wetherbeei_contig21583.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig21583.1.1 vs. uniprot
Match: A0A3S0EQ16_9BRAD (tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB n=3 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A3S0EQ16_9BRAD)

HSP 1 Score: 548 bits (1413), Expect = 5.460e-194
Identity = 274/336 (81.55%), Postives = 296/336 (88.10%), Query Frame = 1 
Query:    1 MGVDVITFGCRLNTVESEIIRRRAEDAGVDDAVIFNTCAVTSEAVAQARQSIRKLKRERPSARIVVTGCAAQTQAGMFAAMDEVDRVLGNDDKLRAAAWSDAHAAFGGVFGVPQGQKIAVSDIMAVTAMAPHLLDGYQSGLPRAFVQVQNGCDHRCTFCIIPFGRGNSRSVAMGAVVDQVRALTEAGHAEIVLTGVDLTSFGGDLPGAPKLGTLVKQILKHVPDCRRLRLSSIDSIEVDRDLLDVIADDSRLMPHLHLSLQAGDDLVLKRMKRRHLRDDAIAFCAQVRRLRPDIAFGADIIAGFPTETEDMFARSLDLVDQCGLTFLHVFPYSARP 1008
            M VDV+TFGCRLN  ESE++RR AE AG+ D V+ NTCAVT+EAVAQARQ+IRKL+RERP ARIVVTGCAAQTQ  MFA MDEVDRVLGNDDK+ AAAW D   AF G      G+KIAVSDIMAVT MAPHL+ G+Q+GLPR FVQVQNGCDHRCTFCIIP+GRGNSRSVAMG VVDQVRALTEAGHAE+VLTGVDLTS+G DLPGAPKLGTL KQILKHVPD +RLR+SSIDSIE DRDLLDVIA D RLMPHLHLSLQAGDDL+LKRMKRRH R DAIAFC QVRRLRPDIAFGADIIAGFPTET++MFARS  LVD+CGLTFLHVFPYS RP
Sbjct:    1 MAVDVVTFGCRLNAFESEVMRREAESAGLQDTVVVNTCAVTNEAVAQARQTIRKLRRERPDARIVVTGCAAQTQTAMFAEMDEVDRVLGNDDKMHAAAWRDTRMAFEG-----GGKKIAVSDIMAVTEMAPHLVAGFQAGLPRVFVQVQNGCDHRCTFCIIPYGRGNSRSVAMGVVVDQVRALTEAGHAEVVLTGVDLTSYGADLPGAPKLGTLTKQILKHVPDVKRLRISSIDSIEADRDLLDVIATDERLMPHLHLSLQAGDDLILKRMKRRHTRADAIAFCEQVRRLRPDIAFGADIIAGFPTETDEMFARSQALVDECGLTFLHVFPYSPRP 331
[Close]
BLAST of mRNA_P-wetherbeei_contig21583.1.1 vs. uniprot
Match: UPI001BAA474D (tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB n=1 Tax=Bradyrhizobium jicamae TaxID=280332 RepID=UPI001BAA474D)

HSP 1 Score: 546 bits (1406), Expect = 7.580e-193
Identity = 267/336 (79.46%), Postives = 298/336 (88.69%), Query Frame = 1 
Query:    1 MGVDVITFGCRLNTVESEIIRRRAEDAGVDDAVIFNTCAVTSEAVAQARQSIRKLKRERPSARIVVTGCAAQTQAGMFAAMDEVDRVLGNDDKLRAAAWSDAHAAFGGVFGVPQGQKIAVSDIMAVTAMAPHLLDGYQSGLPRAFVQVQNGCDHRCTFCIIPFGRGNSRSVAMGAVVDQVRALTEAGHAEIVLTGVDLTSFGGDLPGAPKLGTLVKQILKHVPDCRRLRLSSIDSIEVDRDLLDVIADDSRLMPHLHLSLQAGDDLVLKRMKRRHLRDDAIAFCAQVRRLRPDIAFGADIIAGFPTETEDMFARSLDLVDQCGLTFLHVFPYSARP 1008
            MGVDV+TFGCRLN  ESE+IRR AE AG+ D ++ N+CAVT+EAVAQARQSIR+LKRERP+ARIVVTGCAAQTQA MFA M EVDRV+GND+K+R  AW  A AAF   FG+   +K+AV+DIMAV  MAPHLLDG++ GLPR FVQVQNGCDHRCTFCIIP+GRGNSRSV MGAVVDQVRALTE GHAEIVLTGVDLTS+G DLPG PKLG L KQIL+HVPD +RLR+SSIDSIEVDRDLLDVIADD+RLMPHLHLSLQ+GDD++LKRMKRRH R  A+ FCAQVRRLRPDIAFGADIIAGFPTETE+MFARS DL+D+CGLTFLHVFPYS RP
Sbjct:    1 MGVDVVTFGCRLNAFESEVIRREAEQAGLADTIVINSCAVTNEAVAQARQSIRRLKRERPAARIVVTGCAAQTQADMFADMAEVDRVVGNDEKMRGEAWRAARAAFDTPFGIDATEKVAVADIMAVKEMAPHLLDGFERGLPRVFVQVQNGCDHRCTFCIIPYGRGNSRSVPMGAVVDQVRALTERGHAEIVLTGVDLTSYGADLPGTPKLGQLTKQILRHVPDMKRLRISSIDSIEVDRDLLDVIADDARLMPHLHLSLQSGDDMILKRMKRRHSRQHAVDFCAQVRRLRPDIAFGADIIAGFPTETEEMFARSRDLIDECGLTFLHVFPYSKRP 336
[Close]
BLAST of mRNA_P-wetherbeei_contig21583.1.1 vs. uniprot
Match: W3RKI6_9BRAD (2-methylthioadenine synthase n=1 Tax=Afipia sp. P52-10 TaxID=1429916 RepID=W3RKI6_9BRAD)

HSP 1 Score: 546 bits (1406), Expect = 7.860e-193
Identity = 273/337 (81.01%), Postives = 300/337 (89.02%), Query Frame = 1 
Query:    1 MGVDVITFGCRLNTVESEIIRRRAEDAGVDDAVIFNTCAVTSEAVAQARQSIRKLKRERPSARIVVTGCAAQTQAGMFAAMDEVDRVLGNDDKLRAAAWSDAHAAFGGV-FGVPQGQKIAVSDIMAVTAMAPHLLDGYQSGLPRAFVQVQNGCDHRCTFCIIPFGRGNSRSVAMGAVVDQVRALTEAGHAEIVLTGVDLTSFGGDLPGAPKLGTLVKQILKHVPDCRRLRLSSIDSIEVDRDLLDVIADDSRLMPHLHLSLQAGDDLVLKRMKRRHLRDDAIAFCAQVRRLRPDIAFGADIIAGFPTETEDMFARSLDLVDQCGLTFLHVFPYSARP 1008
            M VDVITFGCRLN  ESEI+RR+AE AG+ + V+ NTCAVT+EAVAQARQSIRKLKRERP ARIVVTGCAAQT+  MFAAM EVDRVLGND+KLRA AW DA   F    FG+ Q QK+AV+DIMAVT MAPHL++G+Q GLPRAFVQ+QNGCDHRCTFCIIP+GRGNSRSV MGAVV+QVRAL E GHAEIVLTGVDLTS+G DLPG PKLG LV+QIL+HVP+ +RLRLSSIDS+EVDRDLLDVIA D+RLMPHLHLSLQAGDDL+LKRMKRRH R DAI FC  VRRLRPDIAFGADIIAGFPTETE+MFARSLDLV+QCGLTFLHVFPYSARP
Sbjct:    1 MSVDVITFGCRLNAYESEIVRRQAERAGLGETVVVNTCAVTNEAVAQARQSIRKLKRERPGARIVVTGCAAQTEPDMFAAMAEVDRVLGNDEKLRAEAWRDARVTFDRAPFGLAQEQKVAVADIMAVTEMAPHLVEGFQRGLPRAFVQIQNGCDHRCTFCIIPYGRGNSRSVPMGAVVNQVRALVEGGHAEIVLTGVDLTSYGADLPGTPKLGALVRQILRHVPELQRLRLSSIDSVEVDRDLLDVIASDARLMPHLHLSLQAGDDLILKRMKRRHSRADAIEFCELVRRLRPDIAFGADIIAGFPTETEEMFARSLDLVEQCGLTFLHVFPYSARP 337
[Close]
BLAST of mRNA_P-wetherbeei_contig21583.1.1 vs. uniprot
Match: A0A8I1RPW8_9BRAD (tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB n=1 Tax=Afipia sp. TaxID=1871052 RepID=A0A8I1RPW8_9BRAD)

HSP 1 Score: 544 bits (1402), Expect = 2.970e-192
Identity = 271/336 (80.65%), Postives = 297/336 (88.39%), Query Frame = 1 
Query:    1 MGVDVITFGCRLNTVESEIIRRRAEDAGVDDAVIFNTCAVTSEAVAQARQSIRKLKRERPSARIVVTGCAAQTQAGMFAAMDEVDRVLGNDDKLRAAAWSDAHAAFGGVFGVPQGQKIAVSDIMAVTAMAPHLLDGYQSGLPRAFVQVQNGCDHRCTFCIIPFGRGNSRSVAMGAVVDQVRALTEAGHAEIVLTGVDLTSFGGDLPGAPKLGTLVKQILKHVPDCRRLRLSSIDSIEVDRDLLDVIADDSRLMPHLHLSLQAGDDLVLKRMKRRHLRDDAIAFCAQVRRLRPDIAFGADIIAGFPTETEDMFARSLDLVDQCGLTFLHVFPYSARP 1008
            M VDV+TFGCRLN+ ESE+IRR AE AG+ D ++ NTCAVTSEAVAQARQ+IR+LKR++P ARIVVTGCAAQTQ  MFA M EVDRV+GNDDK+R  AW DA AA  G F VPQ +KIAVSDIMAVT MAPHL++G+QSGLPR FVQVQNGCDHRCTFCIIP+GRGNSRSVAMGAVVDQVRAL +AGHAEIVLTGVD+TS+G DLPGAPKLG L KQILKHVPD +RLR+SSIDSIE DRDLLDVIA D RLMPHLHLSLQAGDDL+LKRMKRRH R DAI FC QVR LRPD+AFGADIIAGFPTETE+MFARSLDLV +C LTFLHVFPYS RP
Sbjct:    1 MTVDVVTFGCRLNSFESEVIRREAEGAGLQDTIVVNTCAVTSEAVAQARQTIRRLKRDKPGARIVVTGCAAQTQTQMFAEMGEVDRVVGNDDKMRLEAWQDAKAALTGAFDVPQ-EKIAVSDIMAVTEMAPHLVEGFQSGLPRVFVQVQNGCDHRCTFCIIPYGRGNSRSVAMGAVVDQVRALVDAGHAEIVLTGVDVTSYGADLPGAPKLGMLTKQILKHVPDLKRLRISSIDSIEADRDLLDVIATDDRLMPHLHLSLQAGDDLILKRMKRRHTRADAIGFCRQVRTLRPDMAFGADIIAGFPTETEEMFARSLDLVAECDLTFLHVFPYSKRP 335
[Close]
BLAST of mRNA_P-wetherbeei_contig21583.1.1 vs. uniprot
Match: UPI001F31DF18 (tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB n=1 Tax=Bradyrhizobium sp. G127 TaxID=2904800 RepID=UPI001F31DF18)

HSP 1 Score: 544 bits (1401), Expect = 4.220e-192
Identity = 271/336 (80.65%), Postives = 296/336 (88.10%), Query Frame = 1 
Query:    1 MGVDVITFGCRLNTVESEIIRRRAEDAGVDDAVIFNTCAVTSEAVAQARQSIRKLKRERPSARIVVTGCAAQTQAGMFAAMDEVDRVLGNDDKLRAAAWSDAHAAFGGVFGVPQGQKIAVSDIMAVTAMAPHLLDGYQSGLPRAFVQVQNGCDHRCTFCIIPFGRGNSRSVAMGAVVDQVRALTEAGHAEIVLTGVDLTSFGGDLPGAPKLGTLVKQILKHVPDCRRLRLSSIDSIEVDRDLLDVIADDSRLMPHLHLSLQAGDDLVLKRMKRRHLRDDAIAFCAQVRRLRPDIAFGADIIAGFPTETEDMFARSLDLVDQCGLTFLHVFPYSARP 1008
            M V+V+TFGCRLNT ESE+IRR AE AG+ + ++ NTCAVT+EAVAQARQ+IRKL+R++P ARIVVTGCAAQTQ  MFA M EVDRVLGNDDK+R  AW D  AAF   F VP  +K+AVSDIMAVT MAPHL  G+QSG+PR FVQVQNGCDHRCTFCIIP+GRGNSRSVAMGAVVDQVRALTEAGHAEIVLTGVDLTS+G DLPGAPKLGTL KQILKHVP+ RRLR+SSIDSIE DRDLLDVIA D RLMPHLHLSLQAGDDLVLKRMKRRH R DAI FC Q+RRLRPD+AFGADIIAGFPTETE+MF RS DLVD+CGLTFLHVFPYS RP
Sbjct:    1 MTVEVVTFGCRLNTFESEVIRREAEGAGLHNTIVVNTCAVTNEAVAQARQTIRKLRRDKPGARIVVTGCAAQTQTVMFAEMTEVDRVLGNDDKMRGGAWRDTRAAFETAFDVPH-EKLAVSDIMAVTEMAPHLAAGFQSGMPRVFVQVQNGCDHRCTFCIIPYGRGNSRSVAMGAVVDQVRALTEAGHAEIVLTGVDLTSYGADLPGAPKLGTLTKQILKHVPELRRLRISSIDSIEADRDLLDVIATDERLMPHLHLSLQAGDDLVLKRMKRRHTRADAIDFCRQIRRLRPDMAFGADIIAGFPTETEEMFTRSQDLVDECGLTFLHVFPYSKRP 335
[Close]
BLAST of mRNA_P-wetherbeei_contig21583.1.1 vs. uniprot
Match: A0A4U6BR03_9BRAD (tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB n=4 Tax=Afipia TaxID=1033 RepID=A0A4U6BR03_9BRAD)

HSP 1 Score: 543 bits (1398), Expect = 1.050e-191
Identity = 275/336 (81.85%), Postives = 295/336 (87.80%), Query Frame = 1 
Query:    1 MGVDVITFGCRLNTVESEIIRRRAEDAGVDDAVIFNTCAVTSEAVAQARQSIRKLKRERPSARIVVTGCAAQTQAGMFAAMDEVDRVLGNDDKLRAAAWSDAHAAFGGVFGVPQGQKIAVSDIMAVTAMAPHLLDGYQSGLPRAFVQVQNGCDHRCTFCIIPFGRGNSRSVAMGAVVDQVRALTEAGHAEIVLTGVDLTSFGGDLPGAPKLGTLVKQILKHVPDCRRLRLSSIDSIEVDRDLLDVIADDSRLMPHLHLSLQAGDDLVLKRMKRRHLRDDAIAFCAQVRRLRPDIAFGADIIAGFPTETEDMFARSLDLVDQCGLTFLHVFPYSARP 1008
            M VDV+TFGCRLNT ESE+IRR AE AG+ DA++ NTCAVT+EAVAQARQ+IRKL+R+RP ARIVVTGCAAQTQ  MFA M EVDRVLGNDDK+R+AAW D  AAF     VP G KIAVSDIMAVT MAPHL  G+Q GLPR FVQVQNGCDHRCTFCIIP+GRGNSRSVAMGAVVDQVRAL EAGHAEIVLTGVDLTS+G DLPGAP+LGTL KQILKHVPD +RLR+SSIDSIE DRDLLD IA D RLMPHLHLSLQAGDDL+LKRMKRRH R DAI FC QVRRLRPDIAFGADIIAGFPTETE+MFARS DLVD+C LTFLHVFPYS RP
Sbjct:    1 MTVDVVTFGCRLNTFESEVIRREAESAGLQDAIVVNTCAVTNEAVAQARQTIRKLRRDRPDARIVVTGCAAQTQTQMFAQMVEVDRVLGNDDKMRSAAWRDTRAAF----EVP-GDKIAVSDIMAVTEMAPHLAAGFQRGLPRVFVQVQNGCDHRCTFCIIPYGRGNSRSVAMGAVVDQVRALAEAGHAEIVLTGVDLTSYGADLPGAPRLGTLTKQILKHVPDLKRLRISSIDSIEADRDLLDTIATDERLMPHLHLSLQAGDDLILKRMKRRHSRADAIDFCRQVRRLRPDIAFGADIIAGFPTETEEMFARSQDLVDECDLTFLHVFPYSPRP 331
[Close]
BLAST of mRNA_P-wetherbeei_contig21583.1.1 vs. uniprot
Match: A0A4U6RIH5_BRAEL (tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB n=29 Tax=Bradyrhizobium TaxID=374 RepID=A0A4U6RIH5_BRAEL)

HSP 1 Score: 542 bits (1397), Expect = 1.970e-191
Identity = 266/336 (79.17%), Postives = 298/336 (88.69%), Query Frame = 1 
Query:    1 MGVDVITFGCRLNTVESEIIRRRAEDAGVDDAVIFNTCAVTSEAVAQARQSIRKLKRERPSARIVVTGCAAQTQAGMFAAMDEVDRVLGNDDKLRAAAWSDAHAAFGGVFGVPQGQKIAVSDIMAVTAMAPHLLDGYQSGLPRAFVQVQNGCDHRCTFCIIPFGRGNSRSVAMGAVVDQVRALTEAGHAEIVLTGVDLTSFGGDLPGAPKLGTLVKQILKHVPDCRRLRLSSIDSIEVDRDLLDVIADDSRLMPHLHLSLQAGDDLVLKRMKRRHLRDDAIAFCAQVRRLRPDIAFGADIIAGFPTETEDMFARSLDLVDQCGLTFLHVFPYSARP 1008
            MGVDV+TFGCRLN  ESE+IRR AE AG+ D ++ N+CAVT+EAVAQARQSIRKLKRERP ARIVVTGCAAQTQ+ MFA M EVDRV+GND+K+R  AW    AAF   FG+   +K+AV+DIMAVT MAPHLLDG++ GLPRAFVQVQNGCDHRCTFCIIP+GRGNSRSVAMGAVVDQV AL E GHAEIVLTGVDLTS+G DLPGAPKLG L +QIL+HVP+ +RLR+SSIDSIE DRDLLDVIA+D+RLMPHLHLSLQ+GDD++LKRMKRRH R DAI FCAQVRRLRPDIAFGADIIAGFPTE+E+MFARSLDLV+QC LTFLHVFPYS RP
Sbjct:    1 MGVDVVTFGCRLNAFESEVIRREAEQAGLSDTIVINSCAVTNEAVAQARQSIRKLKRERPHARIVVTGCAAQTQSQMFADMAEVDRVVGNDEKMRGDAWQATRAAFEAPFGIDASEKVAVADIMAVTEMAPHLLDGFERGLPRAFVQVQNGCDHRCTFCIIPYGRGNSRSVAMGAVVDQVCALVERGHAEIVLTGVDLTSYGADLPGAPKLGQLTRQILRHVPELKRLRISSIDSIEADRDLLDVIANDTRLMPHLHLSLQSGDDMILKRMKRRHSRQDAIDFCAQVRRLRPDIAFGADIIAGFPTESEEMFARSLDLVEQCDLTFLHVFPYSRRP 336
[Close]
BLAST of mRNA_P-wetherbeei_contig21583.1.1 vs. uniprot
Match: UPI001BAC3EF6 (tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB n=1 Tax=Bradyrhizobium lablabi TaxID=722472 RepID=UPI001BAC3EF6)

HSP 1 Score: 540 bits (1392), Expect = 1.020e-190
Identity = 263/336 (78.27%), Postives = 295/336 (87.80%), Query Frame = 1 
Query:    1 MGVDVITFGCRLNTVESEIIRRRAEDAGVDDAVIFNTCAVTSEAVAQARQSIRKLKRERPSARIVVTGCAAQTQAGMFAAMDEVDRVLGNDDKLRAAAWSDAHAAFGGVFGVPQGQKIAVSDIMAVTAMAPHLLDGYQSGLPRAFVQVQNGCDHRCTFCIIPFGRGNSRSVAMGAVVDQVRALTEAGHAEIVLTGVDLTSFGGDLPGAPKLGTLVKQILKHVPDCRRLRLSSIDSIEVDRDLLDVIADDSRLMPHLHLSLQAGDDLVLKRMKRRHLRDDAIAFCAQVRRLRPDIAFGADIIAGFPTETEDMFARSLDLVDQCGLTFLHVFPYSARP 1008
            MGV+++TFGCRLN  ESE+I R AE AG+ D ++ N+CAVT+EAVAQARQSIR++KRERP  RIVVTGCAAQTQA MFA M+EVDRVLGND+K+R  AW +  AAF   FG+   +KIAV+DIM V  MAPHLL+GYQ GLPR FVQVQNGCDHRCTFCIIP+GRGNSRSV MGAVVDQVR L E GHAEIVLTGVDLTS+G DLPGAPKLG L KQIL+HVP+ +RLR+SSIDSIE DRDLLDVIADD+RLMPHLHLSLQ+GDD++LKRMKRRHLR DAIAFC QVRRLRPDIAFGADIIAGFPTETE+MF+RS DLVD+CGLTFLHVFPYS RP
Sbjct:    1 MGVEIVTFGCRLNAFESEVILREAERAGLSDTIVINSCAVTNEAVAQARQSIRRIKRERPGLRIVVTGCAAQTQAKMFAGMEEVDRVLGNDEKMRGEAWRETGAAFDAGFGIADTEKIAVADIMQVREMAPHLLEGYQRGLPRVFVQVQNGCDHRCTFCIIPYGRGNSRSVPMGAVVDQVRTLVERGHAEIVLTGVDLTSYGADLPGAPKLGMLTKQILRHVPELKRLRISSIDSIEADRDLLDVIADDARLMPHLHLSLQSGDDMILKRMKRRHLRQDAIAFCDQVRRLRPDIAFGADIIAGFPTETEEMFSRSQDLVDECGLTFLHVFPYSPRP 336
[Close]
BLAST of mRNA_P-wetherbeei_contig21583.1.1 vs. uniprot
Match: F7QHR2_9BRAD (MiaB family protein n=2 Tax=Bradyrhizobiaceae TaxID=41294 RepID=F7QHR2_9BRAD)

HSP 1 Score: 539 bits (1388), Expect = 3.470e-190
Identity = 272/336 (80.95%), Postives = 292/336 (86.90%), Query Frame = 1 
Query:    1 MGVDVITFGCRLNTVESEIIRRRAEDAGVDDAVIFNTCAVTSEAVAQARQSIRKLKRERPSARIVVTGCAAQTQAGMFAAMDEVDRVLGNDDKLRAAAWSDAHAAFGGVFGVPQGQKIAVSDIMAVTAMAPHLLDGYQSGLPRAFVQVQNGCDHRCTFCIIPFGRGNSRSVAMGAVVDQVRALTEAGHAEIVLTGVDLTSFGGDLPGAPKLGTLVKQILKHVPDCRRLRLSSIDSIEVDRDLLDVIADDSRLMPHLHLSLQAGDDLVLKRMKRRHLRDDAIAFCAQVRRLRPDIAFGADIIAGFPTETEDMFARSLDLVDQCGLTFLHVFPYSARP 1008
            M VDVITFGCRLN+ ES++IRR AE AG+ D ++ NTCAVT+EAVAQARQ+IRKL+RERP ARIVVTGCAAQTQ  MFA M EVDRVLGNDDK+R+ AW     AF        G+KI+VSDIMAVT MAPHL  G+QSGLPR FVQVQNGCDHRCTFCIIP+GRGNSRSVAMGAVVDQVRALTEAGHAEIVLTGVDLTS+GGDLPGAP LG L KQILKHVP+ RRLR+SSIDSIE DRDLLDVIA D RLMPHLHLSLQAGDD++LKRMKRRH R DAIAFC QVRRLRPDIAFGADIIAGFPTETEDMFARS  LVD C LTFLHVFPYSARP
Sbjct:    1 MAVDVITFGCRLNSFESDVIRREAEGAGLQDTIVVNTCAVTNEAVAQARQTIRKLRRERPGARIVVTGCAAQTQTDMFAQMSEVDRVLGNDDKMRSDAWRSTRLAFDDA-----GEKISVSDIMAVTEMAPHLAAGFQSGLPRVFVQVQNGCDHRCTFCIIPYGRGNSRSVAMGAVVDQVRALTEAGHAEIVLTGVDLTSYGGDLPGAPTLGMLTKQILKHVPELRRLRISSIDSIEADRDLLDVIATDERLMPHLHLSLQAGDDMILKRMKRRHSRADAIAFCNQVRRLRPDIAFGADIIAGFPTETEDMFARSQALVDDCDLTFLHVFPYSARP 331
[Close]
BLAST of mRNA_P-wetherbeei_contig21583.1.1 vs. uniprot
Match: UPI00112770BC (tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB n=2 Tax=Bradyrhizobium TaxID=374 RepID=UPI00112770BC)

HSP 1 Score: 538 bits (1387), Expect = 5.110e-190
Identity = 265/336 (78.87%), Postives = 297/336 (88.39%), Query Frame = 1 
Query:    1 MGVDVITFGCRLNTVESEIIRRRAEDAGVDDAVIFNTCAVTSEAVAQARQSIRKLKRERPSARIVVTGCAAQTQAGMFAAMDEVDRVLGNDDKLRAAAWSDAHAAFGGVFGVPQGQKIAVSDIMAVTAMAPHLLDGYQSGLPRAFVQVQNGCDHRCTFCIIPFGRGNSRSVAMGAVVDQVRALTEAGHAEIVLTGVDLTSFGGDLPGAPKLGTLVKQILKHVPDCRRLRLSSIDSIEVDRDLLDVIADDSRLMPHLHLSLQAGDDLVLKRMKRRHLRDDAIAFCAQVRRLRPDIAFGADIIAGFPTETEDMFARSLDLVDQCGLTFLHVFPYSARP 1008
            M VD++TFGCRLN  E+E+IRR AE AG+ D ++ N+CAVT+EAVAQARQSIRKLKRERP++RIVVTGCAAQTQ+ MFA M+EVDRV+GNDDK+RA+AW +A  AF     V  G+KIAVSDIMAV  MAPHLLDG+ SGLPR FVQVQNGCDHRCTFCIIP+GRGNSRSV MGAVV+QVRAL E GHAEIVLTGVDLTS+G DLPGAPKLG L KQIL+HVP+ +RLR+SSIDSIE D DLLD IADD+RLMPHLHLSLQ+GDD++LKRMKRRHLRDDAI FCAQVRRLRPDI  GADIIAGFPTETE+MFARSLDLV +CGLTFLHVFPYS RP
Sbjct:    1 MAVDIVTFGCRLNAFEAEVIRREAEGAGLSDTIVINSCAVTNEAVAQARQSIRKLKRERPNSRIVVTGCAAQTQSRMFADMEEVDRVVGNDDKMRASAWREARDAF----DVDAGEKIAVSDIMAVKEMAPHLLDGFASGLPRVFVQVQNGCDHRCTFCIIPYGRGNSRSVPMGAVVEQVRALVERGHAEIVLTGVDLTSYGADLPGAPKLGALTKQILRHVPELKRLRISSIDSIEADADLLDAIADDARLMPHLHLSLQSGDDMILKRMKRRHLRDDAIDFCAQVRRLRPDIVLGADIIAGFPTETEEMFARSLDLVGECGLTFLHVFPYSPRP 332
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21583.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3S0EQ16_9BRAD5.460e-19481.55tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-... [more]
UPI001BAA474D7.580e-19379.46tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-... [more]
W3RKI6_9BRAD7.860e-19381.012-methylthioadenine synthase n=1 Tax=Afipia sp. P5... [more]
A0A8I1RPW8_9BRAD2.970e-19280.65tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-... [more]
UPI001F31DF184.220e-19280.65tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-... [more]
A0A4U6BR03_9BRAD1.050e-19181.85tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-... [more]
A0A4U6RIH5_BRAEL1.970e-19179.17tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-... [more]
UPI001BAC3EF61.020e-19078.27tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-... [more]
F7QHR2_9BRAD3.470e-19080.95MiaB family protein n=2 Tax=Bradyrhizobiaceae TaxI... [more]
UPI00112770BC5.110e-19078.87tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig21583contigP-wetherbeei_contig21583:151..1158 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog883078.HMPREF9695_04789
Preferred namemtaB
PFAMsRadical_SAM,UPF0004
Model size1008
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00003,RC03221
KEGG koko:K18707
KEGG ReactionR10649
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035598,GO:0035600,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050497,GO:0071704,GO:0090304,GO:1901360
Exons1
Evalue1.27e-194
EggNOG OGsCOG0621@1|root,COG0621@2|Bacteria,1MUCS@1224|Proteobacteria,2TRYD@28211|Alphaproteobacteria,3JTP7@41294|Bradyrhizobiaceae
EC2.8.4.5
DescriptionMiaB-like tRNA modifying enzyme
Cds size1008
COG categoryJ
BRITEko00000,ko01000,ko03016
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186229.5604868-CDS-P-wetherbeei_contig21583:150..11581683186229.5604868-CDS-P-wetherbeei_contig21583:150..1158Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig21583 151..1158 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig21583.1.1prot_P-wetherbeei_contig21583.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig21583 151..1158 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig21583.1.1

>prot_P-wetherbeei_contig21583.1.1 ID=prot_P-wetherbeei_contig21583.1.1|Name=mRNA_P-wetherbeei_contig21583.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=336bp
MGVDVITFGCRLNTVESEIIRRRAEDAGVDDAVIFNTCAVTSEAVAQARQ
SIRKLKRERPSARIVVTGCAAQTQAGMFAAMDEVDRVLGNDDKLRAAAWS
DAHAAFGGVFGVPQGQKIAVSDIMAVTAMAPHLLDGYQSGLPRAFVQVQN
GCDHRCTFCIIPFGRGNSRSVAMGAVVDQVRALTEAGHAEIVLTGVDLTS
FGGDLPGAPKLGTLVKQILKHVPDCRRLRLSSIDSIEVDRDLLDVIADDS
RLMPHLHLSLQAGDDLVLKRMKRRHLRDDAIAFCAQVRRLRPDIAFGADI
IAGFPTETEDMFARSLDLVDQCGLTFLHVFPYSARP
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mRNA from alignment at P-wetherbeei_contig21583:151..1158+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig21583.1.1 ID=mRNA_P-wetherbeei_contig21583.1.1|Name=mRNA_P-wetherbeei_contig21583.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1008bp|location=Sequence derived from alignment at P-wetherbeei_contig21583:151..1158+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGTGTCGACGTCATCACCTTCGGCTGCCGGCTGAATACGGTCGAGTC
GGAGATCATTCGCCGTCGCGCCGAAGACGCCGGCGTCGATGACGCGGTGA
TCTTCAACACCTGTGCCGTCACCAGCGAGGCCGTGGCGCAGGCGCGGCAA
TCGATCCGCAAGCTGAAGCGCGAACGGCCCAGCGCGCGCATCGTCGTCAC
CGGTTGCGCCGCGCAGACCCAGGCCGGCATGTTTGCTGCGATGGACGAGG
TCGATCGCGTCCTCGGCAACGATGACAAGCTGCGCGCTGCCGCGTGGAGC
GATGCCCATGCGGCATTCGGCGGCGTCTTCGGCGTCCCGCAGGGTCAGAA
GATCGCCGTGTCCGACATCATGGCGGTGACGGCGATGGCGCCGCATCTCC
TCGATGGTTACCAGAGCGGCCTGCCGCGCGCCTTCGTGCAGGTGCAGAAC
GGCTGCGATCACCGTTGCACGTTCTGCATCATCCCCTTCGGCCGCGGCAA
TTCGCGCTCGGTAGCGATGGGTGCGGTGGTCGATCAGGTGCGCGCGCTGA
CCGAGGCGGGGCATGCGGAGATCGTGCTCACCGGCGTCGATCTCACGAGT
TTTGGCGGCGACCTGCCCGGCGCGCCGAAGCTCGGAACGCTGGTGAAGCA
GATCCTCAAGCATGTGCCGGACTGCAGGCGGCTGCGCCTGTCGTCGATCG
ATTCCATCGAGGTGGATCGGGATCTGCTCGACGTCATCGCCGACGACAGC
CGGCTGATGCCGCATCTGCATCTGTCACTGCAGGCGGGCGACGACCTCGT
CCTGAAGCGGATGAAGCGCCGGCATTTGCGGGACGATGCGATTGCGTTCT
GCGCGCAAGTGCGCCGGCTGCGGCCGGACATCGCGTTCGGCGCGGACATC
ATTGCCGGTTTTCCGACCGAGACCGAAGACATGTTCGCCCGCTCGCTCGA
TCTCGTCGACCAATGCGGCCTGACATTCCTGCATGTGTTTCCCTATTCGG
CGCGCCCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig21583:151..1158+

>mRNA_P-wetherbeei_contig21583.1.1 ID=mRNA_P-wetherbeei_contig21583.1.1|Name=mRNA_P-wetherbeei_contig21583.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1008bp|location=Sequence derived from alignment at P-wetherbeei_contig21583:151..1158+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGTGTCGACGTCATCACCTTCGGCTGCCGGCTGAATACGGTCGAGTC
GGAGATCATTCGCCGTCGCGCCGAAGACGCCGGCGTCGATGACGCGGTGA
TCTTCAACACCTGTGCCGTCACCAGCGAGGCCGTGGCGCAGGCGCGGCAA
TCGATCCGCAAGCTGAAGCGCGAACGGCCCAGCGCGCGCATCGTCGTCAC
CGGTTGCGCCGCGCAGACCCAGGCCGGCATGTTTGCTGCGATGGACGAGG
TCGATCGCGTCCTCGGCAACGATGACAAGCTGCGCGCTGCCGCGTGGAGC
GATGCCCATGCGGCATTCGGCGGCGTCTTCGGCGTCCCGCAGGGTCAGAA
GATCGCCGTGTCCGACATCATGGCGGTGACGGCGATGGCGCCGCATCTCC
TCGATGGTTACCAGAGCGGCCTGCCGCGCGCCTTCGTGCAGGTGCAGAAC
GGCTGCGATCACCGTTGCACGTTCTGCATCATCCCCTTCGGCCGCGGCAA
TTCGCGCTCGGTAGCGATGGGTGCGGTGGTCGATCAGGTGCGCGCGCTGA
CCGAGGCGGGGCATGCGGAGATCGTGCTCACCGGCGTCGATCTCACGAGT
TTTGGCGGCGACCTGCCCGGCGCGCCGAAGCTCGGAACGCTGGTGAAGCA
GATCCTCAAGCATGTGCCGGACTGCAGGCGGCTGCGCCTGTCGTCGATCG
ATTCCATCGAGGTGGATCGGGATCTGCTCGACGTCATCGCCGACGACAGC
CGGCTGATGCCGCATCTGCATCTGTCACTGCAGGCGGGCGACGACCTCGT
CCTGAAGCGGATGAAGCGCCGGCATTTGCGGGACGATGCGATTGCGTTCT
GCGCGCAAGTGCGCCGGCTGCGGCCGGACATCGCGTTCGGCGCGGACATC
ATTGCCGGTTTTCCGACCGAGACCGAAGACATGTTCGCCCGCTCGCTCGA
TCTCGTCGACCAATGCGGCCTGACATTCCTGCATGTGTTTCCCTATTCGG
CGCGCCCC
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