mRNA_P-wetherbeei_contig21582.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21582.1.1 vs. uniprot
Match: A0A497XDX1_9PROT (Paraquat-inducible protein A n=1 Tax=Sulfurisoma sediminicola TaxID=1381557 RepID=A0A497XDX1_9PROT) HSP 1 Score: 348 bits (894), Expect = 1.550e-116 Identity = 180/239 (75.31%), Postives = 202/239 (84.52%), Query Frame = 1
Query: 1 SAAAVASFDPAVLWPRIGPVT-QSEPEGSA---ADMGYACCHTCDLLVAKPGPGQPWACPRCGSAVHGMRLHDSLPRTWALLCAASLLLIPANILPVMTVIRFGQGEPSTIIAGVIHLIEDGAIPLGLLVLFASFVVPIAKIIALVVLLVTVQRGSAWRVRDRTLLYRVTEAVGSWSMIDIFLVGILVALVRMDALATVWPGLGATFFGSAVVLTMLAAHSFDPRLVWDRAGAGPEARA 705
S +AVASFDPAVLW R+GPV Q P G+A A MGYA CHTCDLLV P G WACPRCGSAVHG R DS+ RTWALL AA+LLL+PAN+LPVMTVIRFGQGEPSTI+AGV+HLI+DGA PLGLLVLFASFVVP++KI +LV LLVT+QRGS WR RDRTL+YR+TE VG+WSM+DIFLVGILVALVRMD LATV+PG GATFFG+AVVLTMLAAH+FDPRL+WD A G A A
Sbjct: 194 STSAVASFDPAVLWKRMGPVAEQGLPHGAADTAAAMGYATCHTCDLLVRHPAAGDHWACPRCGSAVHGTRHPDSINRTWALLAAATLLLVPANLLPVMTVIRFGQGEPSTILAGVVHLIQDGAWPLGLLVLFASFVVPLSKIASLVFLLVTIQRGSNWRRRDRTLIYRITEVVGAWSMVDIFLVGILVALVRMDGLATVYPGSGATFFGAAVVLTMLAAHAFDPRLIWDTADPGERAAA 432
BLAST of mRNA_P-wetherbeei_contig21582.1.1 vs. uniprot
Match: A0A2M7PXM5_9PROT (Paraquat-inducible membrane protein A n=1 Tax=Zetaproteobacteria bacterium CG_4_10_14_0_8_um_filter_49_80 TaxID=1974111 RepID=A0A2M7PXM5_9PROT) HSP 1 Score: 247 bits (631), Expect = 4.590e-77 Identity = 127/226 (56.19%), Postives = 163/226 (72.12%), Query Frame = 1
Query: 19 SFDPAVLWPRIGPVTQSEPEGS-------AADMGYACCHTCDLLVAKPGPGQPWACPRCGSAVHGMRLHDSLPRTWALLCAASLLLIPANILPVMTVIRFGQGEPSTIIAGVIHLIEDGAIPLGLLVLFASFVVPIAKIIALVVLLVTVQRGSAWRVRDRTLLYRVTEAVGSWSMIDIFLVGILVALVRMDALATVWPGLGATFFGSAVVLTMLAAHSFDPRLVWD 675
SFD ++ WP + +G+ A G CHTC LV + + W CPRC +H MR D+L RTWALL ASLLLIPAN+LP+MTVIRFGQG+PSTI+ GV+HLI G PLGL+V FAS +VP+ K++ALV LLV+VQR S WR DRT LYR+TE +GSWSM+DIF++GIL +LV +DA+AT+ PG+ A++F +AVV+TM+AA SFDPRL+WD
Sbjct: 183 SFDSSLFWPHHFEAVAASSKGASVLISGRARQHGLVTCHTCAYLVDE----KHWNCPRCDEHLH-MRKPDALARTWALLVTASLLLIPANVLPIMTVIRFGQGDPSTILGGVVHLIAAGMWPLGLIVFFASIMVPLTKLLALVFLLVSVQRRSGWRPEDRTRLYRITEIIGSWSMVDIFIIGILTSLVSLDAIATIRPGIAASYFAAAVVVTMIAAQSFDPRLIWD 403
BLAST of mRNA_P-wetherbeei_contig21582.1.1 vs. uniprot
Match: A0A1G0KAK8_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_12_FULL_52_10 TaxID=1798305 RepID=A0A1G0KAK8_9GAMM) HSP 1 Score: 237 bits (605), Expect = 2.340e-74 Identity = 125/230 (54.35%), Postives = 161/230 (70.00%), Query Frame = 1
Query: 19 SFDPAVLWPRIGPVTQSEPEGSAADMGYACCHTCDLL-VAKPGPGQPWACPRCGSAVHGMRLHDSLPRTWALLCAASLLLIPANILPVMTVIRFGQGEPSTIIAGVIHLIEDGAIPLGLLVLFASFVVPIAKIIALVVLLVTVQRGSAWRVRDRTLLYRVTEAVGSWSMIDIFLVGILVALVRMDALATVWPGLGATFFGSAVVLTMLAAHSFDPRLVWDRAGAGPEARA 705
+FDP LW E +A CH C LL + KPG G C RC S++H R +S+ +TWALL +A++L++PAN+ PVMTVIRFGQG P+TI+ G+ HLIEDG L ++V AS VVP+ K+I L LL+++ R S WR RDRTLLYR+TE VG+WSM+DIFLVG+L ALV +DAL+T+ PG+GATFFG+ VVLTM AAHSFDPRL+WD + A + A
Sbjct: 99 NFDPRALWALARQPQPDAAELTAPGARLLNCHICGLLHIDKPGLGH---CRRCDSSLHH-RKDNSIHKTWALLLSAAILMVPANVYPVMTVIRFGQGNPNTILGGITHLIEDGMWGLAMIVFVASIVVPMVKLILLSFLLISIHRKSVWRPRDRTLLYRITEVVGAWSMVDIFLVGLLSALVSLDALSTIRPGIGATFFGAVVVLTMFAAHSFDPRLIWDNSCANTQMEA 324
BLAST of mRNA_P-wetherbeei_contig21582.1.1 vs. uniprot
Match: A0A2D9JKU8_9GAMM (Paraquat-inducible membrane protein A n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2D9JKU8_9GAMM) HSP 1 Score: 239 bits (610), Expect = 6.040e-74 Identity = 128/230 (55.65%), Postives = 159/230 (69.13%), Query Frame = 1
Query: 7 AAVASFDPAVLWP-----RIGPVTQSEPEGSAADMGYACCHTCDLLVAKPGPGQPWACPRCGSAVHGMRLHDSLPRTWALLCAASLLLIPANILPVMTVIRFGQGEPSTIIAGVIHLIEDGAIPLGLLVLFASFVVPIAKIIALVVLLVTVQRGSAWRVRDRTLLYRVTEAVGSWSMIDIFLVGILVALVRMDALATVWPGLGATFFGSAVVLTMLAAHSFDPRLVWDRA 681
AA ASF P ++WP + PV +A G CH C L G C RCGS +H R H+SL RTWAL+ AA++L+IPAN+ PVMTVI+FGQGEPSTI++GV+ LI G L ++V AS VVP+ K+ LV LLV+VQR SAWR DRT LYRVTE VG+WSM+DIFLV IL A+V +DALA++ PG+GA+FFG+ VV+TM AA SFDPRL+WD A
Sbjct: 179 AANASFHPELIWPESEKDKSWPVADIGEHATAEQHGLLVCHLCHALTPADASGVHTRCHRCGSTLHSHRKHNSLTRTWALVIAAAILVIPANVYPVMTVIQFGQGEPSTIMSGVLLLIAQGMWGLAMIVFVASVVVPLMKLALLVYLLVSVQRRSAWRPADRTRLYRVTEVVGAWSMVDIFLVAILSAIVNLDALASIEPGIGASFFGAVVVITMFAALSFDPRLIWDHA 408
BLAST of mRNA_P-wetherbeei_contig21582.1.1 vs. uniprot
Match: A0A1G0K0K7_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_52_10 TaxID=1798297 RepID=A0A1G0K0K7_9GAMM) HSP 1 Score: 232 bits (591), Expect = 7.360e-74 Identity = 119/200 (59.50%), Postives = 152/200 (76.00%), Query Frame = 1
Query: 109 CHTCDLL-VAKPGPGQPWACPRCGSAVHGMRLHDSLPRTWALLCAASLLLIPANILPVMTVIRFGQGEPSTIIAGVIHLIEDGAIPLGLLVLFASFVVPIAKIIALVVLLVTVQRGSAWRVRDRTLLYRVTEAVGSWSMIDIFLVGILVALVRMDALATVWPGLGATFFGSAVVLTMLAAHSFDPRLVWDRAGAGPEARA 705
CH C LL + KPG G C RC S++H R +S+ RTWALL +A++L++PAN+ PVMTVIRFGQG P+TI+ G+ HLIEDG L ++V AS VVP+ K+I L LL+++ R S WR RDRTLLYR+TE VG+WSM+DIFLVG+L ALV +DAL+T+ PG+GATFFG+ VVLTM AAHSFDPRL+WD + A + A
Sbjct: 11 CHICGLLHIDKPGLGH---CRRCDSSLHH-RKDNSIHRTWALLLSAAILMVPANVYPVMTVIRFGQGNPNTILGGITHLIEDGMWGLAMIVFVASIVVPMVKLILLSFLLISIHRKSVWRPRDRTLLYRITEVVGAWSMVDIFLVGLLSALVSLDALSTIRPGIGATFFGAVVVLTMFAAHSFDPRLIWDNSCANTQMEA 206
BLAST of mRNA_P-wetherbeei_contig21582.1.1 vs. uniprot
Match: A0A1J4YL97_9PROT (Paraquat-inducible membrane protein A n=1 Tax=Zetaproteobacteria bacterium CG1_02_53_45 TaxID=1805427 RepID=A0A1J4YL97_9PROT) HSP 1 Score: 239 bits (609), Expect = 8.310e-74 Identity = 129/229 (56.33%), Postives = 165/229 (72.05%), Query Frame = 1
Query: 4 AAAVASFDPAVLWPRIGPVTQSEPEGSAADMGYACCHTCDLLV-----AKPGPGQPWACPRCGSAVHGMRLHDSLPRTWALLCAASLLLIPANILPVMTVIRFGQGEPSTIIAGVIHLIEDGAIPLGLLVLFASFVVPIAKIIALVVLLVTVQRGSAWRVRDRTLLYRVTEAVGSWSMIDIFLVGILVALVRMDALATVWPGLGATFFGSAVVLTMLAAHSFDPRLVWD 675
AAA ASFD A+LWP P ++ G+AAD CHTC LLV ++ G CPRC + +H +L+ SL RTWAL+ +A LLLIPAN+ PVMTVIRFGQGEPSTI AG+ HLIE+G PLG++V AS +VP K+ AL +L ++VQ+ S WR+RDRT+LYR+TE VGSWSM+DIFL+ +L LV++DAL T+ P +GA FF VV T+ AA+SFDPRL+WD
Sbjct: 188 AAAYASFDRALLWPPTPPDC-ADKGGTAADAELISCHTCALLVPASTLSRTGRAH---CPRCNTPLHQRKLN-SLNRTWALIISALLLLIPANVYPVMTVIRFGQGEPSTIAAGIEHLIEEGMWPLGMIVFVASIIVPFMKLAALSLLQISVQKRSGWRMRDRTVLYRLTELVGSWSMVDIFLIALLTGLVKLDALTTITPDIGALFFAGVVVTTIFAANSFDPRLIWD 411
BLAST of mRNA_P-wetherbeei_contig21582.1.1 vs. uniprot
Match: A0A2M7HE69_9PROT (Paraquat-inducible membrane protein A n=1 Tax=Zetaproteobacteria bacterium CG12_big_fil_rev_8_21_14_0_65_55_1124 TaxID=1974127 RepID=A0A2M7HE69_9PROT) HSP 1 Score: 238 bits (608), Expect = 1.720e-73 Identity = 125/220 (56.82%), Postives = 161/220 (73.18%), Query Frame = 1
Query: 22 FDPAVLWPR--IGPVTQSEPEGSAADMGYACCHTCDLLVAKPGPGQPWACPRCGSAVHGMRLHDSLPRTWALLCAASLLLIPANILPVMTVIRFGQGEPSTIIAGVIHLIEDGAIPLGLLVLFASFVVPIAKIIALVVLLVTVQRGSAWRVRDRTLLYRVTEAVGSWSMIDIFLVGILVALVRMDALATVWPGLGATFFGSAVVLTMLAAHSFDPRLVWD 675
FD ++ WP+ +G + P G+A G A CHTC LLV + G CPRCG +H +R +SL RTWALL +A+LL PAN+LP+MTV RFGQGEPSTI++GV HLI G PLGL+V FAS VVPI+K++AL+ LL+++Q+ S WR DRT LYRVTE +GSWSM+DIF++ +L +LV DALAT+ PG+ A+FF VVLTM+AA SFD RL+WD
Sbjct: 200 FDRSLFWPQEAVGSESAWLPTGAAQQYGLAHCHTCALLV-QVSQGH---CPRCGDHLH-LRKPESLTRTWALLASATLLFFPANMLPIMTVTRFGQGEPSTILSGVEHLIAAGMWPLGLIVFFASIVVPISKLVALIFLLLSIQQRSTWRPEDRTRLYRVTEVIGSWSMVDIFIIALLTSLVSFDALATIRPGIAASFFAGMVVLTMIAARSFDSRLIWD 414
BLAST of mRNA_P-wetherbeei_contig21582.1.1 vs. uniprot
Match: A0A1G0JXX0_9GAMM (Paraquat-inducible protein A n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_61_13 TaxID=1798300 RepID=A0A1G0JXX0_9GAMM) HSP 1 Score: 235 bits (600), Expect = 1.420e-72 Identity = 125/230 (54.35%), Postives = 165/230 (71.74%), Query Frame = 1
Query: 7 AAVASFDPAVLWPRIGPVTQSEPEGSAADMGYACCHTCDLLVAKPGPGQPWACPRCGSAVHGMRLHDSLPRTWALLCAASLLLIPANILPVMTVIRFGQGEPSTIIAGVIHLIEDGAIPLGLLVLFASFVVPIAKIIALVVLLVTVQRGSAWRVRDRTLLYRVTEAVGSWSMIDIFLVGILVALVRMDALATVWPGLGATFFGSAVVLTMLAAHSFDPRLVWDRAGAGPE 696
AA ASFD W + P+ + P + C+ C L+ A+ + C RC +A+H R DSL RTWALL +A++LLIPAN+ PVMTVIRFGQGEP+TI++G++HLIE G L L+V FAS VVP++K++ L LL ++++ SAWR RDRTLL+RVTE+VG+WSM+DIFLVG+L ALV +DAL+T+ PG+GATFF + V+ TM AAH FDPRL+WD AG E
Sbjct: 179 AARASFDAHTFWAAV-PLRRPAPAFLPGGR-HLGCNLCGLVTAENPGAREQRCARCQTALHA-RKPDSLGRTWALLMSATILLIPANVYPVMTVIRFGQGEPNTILSGILHLIESGMWGLALIVFFASIVVPVSKLVVLSYLLWSIRKNSAWRPRDRTLLFRVTESVGAWSMVDIFLVGLLSALVSLDALSTIRPGIGATFFAAVVISTMFAAHCFDPRLIWDGAGGAKE 405
BLAST of mRNA_P-wetherbeei_contig21582.1.1 vs. uniprot
Match: A0A8J6NPI4_9DELT (Paraquat-inducible protein A n=1 Tax=Candidatus Desulfatibia vada TaxID=2841696 RepID=A0A8J6NPI4_9DELT) HSP 1 Score: 233 bits (594), Expect = 1.160e-71 Identity = 121/232 (52.16%), Postives = 164/232 (70.69%), Query Frame = 1
Query: 1 SAAAVASFDPAVLWPRIGPVTQSEPEGS-----AADMGYACCHTCDLLVAKPGPGQPW--ACPRCGSAVHGMRLHDSLPRTWALLCAASLLLIPANILPVMTVIRFGQGEPSTIIAGVIHLIEDGAIPLGLLVLFASFVVPIAKIIALVVLLVTVQRGSAWRVRDRTLLYRVTEAVGSWSMIDIFLVGILVALVRMDALATVWPGLGATFFGSAVVLTMLAAHSFDPRLVWD 675
SAAA A+ D ++WP + + EP G+ AA G CHTC LLV + G CPRC S +H R +SL RTWAL+CAA++L IPAN+ PVMTVI+FG+G+P+TI+ G++HLIE G L +++ FAS VVP+ K+I L LL+T+Q+ S+WR RDR LL+RV EAVG+WSM+D+++V IL LV + AL+T+ PG+G +FFG+ VV+TM AA FDPRL+WD
Sbjct: 177 SAAANANLDAFLIWPPM----KLEPMGNGSGDTAAKRGLIACHTCALLVPETGQNDHGHGVCPRCESPLHS-RKTNSLTRTWALICAAAILYIPANVYPVMTVIQFGRGDPNTILVGIVHLIEGGMWGLAMIIFFASIVVPVLKLIVLSFLLITIQKKSSWRFRDRALLFRVIEAVGAWSMVDVYVVAILAGLVNLGALSTIRPGIGVSFFGAVVVITMFAARGFDPRLIWD 403
BLAST of mRNA_P-wetherbeei_contig21582.1.1 vs. uniprot
Match: A0A661R9M8_9DELT (Paraquat-inducible membrane protein A n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661R9M8_9DELT) HSP 1 Score: 233 bits (595), Expect = 1.410e-71 Identity = 124/229 (54.15%), Postives = 163/229 (71.18%), Query Frame = 1
Query: 7 AAVASFDPAVLWPRIGPVTQSEPEG-SAADMGYACCHTCDLLVAK-----PGPGQPWACPRCGSAVHGMRLHDSLPRTWALLCAASLLLIPANILPVMTVIRFGQGEPSTIIAGVIHLIEDGAIPLGLLVLFASFVVPIAKIIALVVLLVTVQRGSAWRVRDRTLLYRVTEAVGSWSMIDIFLVGILVALVRMDALATVWPGLGATFFGSAVVLTMLAAHSFDPRLVWD 675
AA A+ D V+WP + + G +A++ CHTC LLV K G G CPRC + +H R +SLPRTWAL+ AA+LL IPANI PVMT+I+FGQG P+TI++GVIHLIE G L L++ FAS ++PI K+I L LL+TV++ S+WR RDRTLL+RV E VG+WSM+DI++V +LV LV + AL+T+ PG+G FFG+ VV+TM AAHSFDPRL+WD
Sbjct: 198 AANANLDTFVIWPSMKQELSGKSSGETASERDLIGCHTCALLVPKNYLDKDGNGN---CPRCTAPLHS-RKSNSLPRTWALIIAAALLFIPANIYPVMTIIQFGQGHPNTILSGVIHLIESGMWVLALIIFFASIIIPILKLIVLSFLLMTVKKRSSWRSRDRTLLFRVIEVVGAWSMVDIYVVAVLVGLVNLGALSTIRPGIGVAFFGAMVVITMFAAHSFDPRLIWD 422 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21582.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21582.1.1 >prot_P-wetherbeei_contig21582.1.1 ID=prot_P-wetherbeei_contig21582.1.1|Name=mRNA_P-wetherbeei_contig21582.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=236bp SAAAVASFDPAVLWPRIGPVTQSEPEGSAADMGYACCHTCDLLVAKPGPGback to top mRNA from alignment at P-wetherbeei_contig21582:447..1154- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21582.1.1 ID=mRNA_P-wetherbeei_contig21582.1.1|Name=mRNA_P-wetherbeei_contig21582.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=708bp|location=Sequence derived from alignment at P-wetherbeei_contig21582:447..1154- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21582:447..1154- >mRNA_P-wetherbeei_contig21582.1.1 ID=mRNA_P-wetherbeei_contig21582.1.1|Name=mRNA_P-wetherbeei_contig21582.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=708bp|location=Sequence derived from alignment at P-wetherbeei_contig21582:447..1154- (Phaeothamnion wetherbeei SAG_119_79)back to top |