mRNA_P-wetherbeei_contig21570.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig21570.1.1
Unique NamemRNA_P-wetherbeei_contig21570.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig21570.1.1 vs. uniprot
Match: A0A6H5KGW4_9PHAE (WS_DGAT_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGW4_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 4.840e-29
Identity = 95/245 (38.78%), Postives = 127/245 (51.84%), Query Frame = 1
Query:    1 QQKPLWRMRRIVEGGTDGXXXXXXAVM-LRVHHTIGDGMSLVGVGLKALRGLDGRSLDADSLGARRGGGGASRGGKRPSLLTL----LGKLLRSFVEVLWLPVSAFDRPTPF-------------RRPPEAA--------GGDVFSGSRRTVAVPTVSLNLVKAIKNKAHATVNDVMVSLIGGAVRRY-VADGSAGRGTDGSTKLRARALIPVALPRAA--PWGDYDEGLQNKWVFCSIPMSMDE 648
            ++ PLW +  ++E   +G      AV+ LRVHHT+GDGMSLVGV    L    G       LGA   G  A+    +P+   L     GK+L+   +V+ L  S  D P PF               PP               FSG RRTV +P + L LVK +K+ +  TVNDV+++LIGG +RRY +A+G A   + G    R+RALIPVALPR++  P G     L NKW F S+ +SMDE
Sbjct:  149 RELPLWGLH-LIENTAEGEAGVGAAVLALRVHHTLGDGMSLVGVSRSVLEAAGG-----GELGAGLNGSSAAEAVVKPANRGLSNFSAGKILQGIRDVIVLSSSGPDTPLPFGHFEAPLKGGAAAAHPPRKGFFRSLFGPKRGSFSGRRRTVLLPDIPLTLVKKMKDVSGTTVNDVVMTLIGGCIRRYSLANGDAAGNSIGGPGFRSRALIPVALPRSSSPPSGAI---LCNKWAFVSMNLSMDE 384          
BLAST of mRNA_P-wetherbeei_contig21570.1.1 vs. uniprot
Match: W7U9R7_9STRA (O-acyltransferase WSD1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U9R7_9STRA)

HSP 1 Score: 106 bits (265), Expect = 4.650e-23
Identity = 77/190 (40.53%), Postives = 102/190 (53.68%), Query Frame = 1
Query:   73 AVMLRVHHTIGDGMSLVGVGLKALRGLDGRSLDADSLGARRGGGGASRGGKRPSLLTLLGKLLRSFVEVLWLPVSAFDRPTPFRRPPEAAGGDVFSGSRRTVAVPTVSLNLVKAIKNKAHATVNDVMVSLIGGAVRRYVADGSAGRGTD--GSTKLRARALIPVALPRAAPWGDYDEGLQNKWVFCSIPM 636
            AV+ RV+H IGDG+SL  +     +GLDG+SL      +RR        G  P+L      LL SF +VL  P +AFD       P +      F+G R  V +PTV L+ +K++KN A  TVNDV+ + + GAV R          TD    +K+R RAL+PVALPR    GD   GL+NKW F S+ M
Sbjct:  190 AVICRVNHAIGDGVSLANLIPYVFKGLDGQSLPTKEKFSRR------ETGFMPTLRNPF-TLLASFFKVLGTPSTAFDTDVGLTIPDKKQ--ITFTGRRSIVRIPTVKLSFIKSVKNAAGVTVNDVVFAALAGAVHRLRVAMQDPVMTDPLSGSKVRTRALMPVALPRKV--GDTVRGLRNKWSFASVNM 368          
BLAST of mRNA_P-wetherbeei_contig21570.1.1 vs. uniprot
Match: A0A835ZBT8_9STRA (WS_DGAT_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBT8_9STRA)

HSP 1 Score: 103 bits (257), Expect = 6.800e-22
Identity = 83/230 (36.09%), Postives = 116/230 (50.43%), Query Frame = 1
Query:   10 PLWRMRRIVEGGTDGXXXXXXAVMLRVHHTIGDGMSLVGVGLKALRGLDGRSLDAD-SLGARRGGGGASRGGKRPSLLTLLGKLLRSFVEVLWLPVSAFDRPTPFRRPPEAAGGDVFSGSRRTVAVPTVSLNLVKAIKNKAHATVNDVMVSLIGGAVRRYVADGSAGRGTD--GSTKLRA-----------------RALIPVALPRAAPWGD-YDEGLQNKWVFCSIPM 636
            PLW +  ++E    G       V++R HH IGDG+SL+GV    +   +G  LD   +L   +GG GA    K+PS+ +L+GK L   V+V  + VS FD       P E     +  G R  V  P V L+LVK +K+ A  TVND+M+ +  GA+RR++ D    RGT   G  KL A                 RAL+P+A+PR       ++EGL+N W F S  M
Sbjct:  174 PLWHIN-VIENTAPGGES---VVLVRNHHVIGDGVSLIGVIDHVMFTPEGEPLDVSGALQELKGGSGARP--KKPSVFSLMGKALSGLVQVALVGVSPFDSKVSLNGPSEEK---LKFGPRCFVHFPNVPLDLVKKLKDAAGVTVNDIMMCVTSGALRRHLTD----RGTTPPGPLKLCALHLGFMTAPMAGGALQLRALLPIAMPRKITREQRFNEGLENVWGFASADM 390          
BLAST of mRNA_P-wetherbeei_contig21570.1.1 vs. uniprot
Match: A0A7S2W284_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W284_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 3.470e-20
Identity = 68/215 (31.63%), Postives = 104/215 (48.37%), Query Frame = 1
Query:   76 VMLRVHHTIGDGMSLVGVGLKALRGLDGRSLDADSLGARRGGGGASRGGKRPSLLTLLGKLLRSFVEVLWLPVSAFDRPTPFRRPPEAAGGDVFSGSRRTVAVPTVSLNLVKAIKNKAHATVNDVMVSLIGGAVRRYV----------ADGSAGRGTDGSTK-------------LRARALIPVALPRAAPWGDYDEG--LQNKWVFCSIPMSMD 645
            ++ R+HH IGDG+SLV          +G ++D    G       +SR   RPS+LTL  +  R  V    L  S+FD    F    +     +++G+R+ +  P V L  +K +KN  + TVND+M+  + GA+ RY           A+  A RG   S +             L  RAL+PVA+PR +P  D + G  L+N+W F S+ + M+
Sbjct:  159 ILFRIHHIIGDGISLVQAMNTVFSDANGEAVDISMPGLS-----SSRRRARPSILTLTYRFFRDLVHCAALAKSSFDSMLAFTAQDKRRM--LYTGNRKIIFFPNVELEFIKQLKNGLNVTVNDIMLGAVAGAILRYCKQMDDPVLKRAEARAQRGMSSSRRSEQGEDGEMLLSGLLMRALVPVAVPRESPASDEEVGASLRNRWAFASVKLPMN 366          
BLAST of mRNA_P-wetherbeei_contig21570.1.1 vs. uniprot
Match: A0A507DU59_9FUNG (Diacylglycerol O-acyltransferase n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DU59_9FUNG)

HSP 1 Score: 90.9 bits (224), Expect = 1.850e-17
Identity = 73/225 (32.44%), Postives = 113/225 (50.22%), Query Frame = 1
Query:    7 KPLWRMRRIVEGGTDGXXXXXXAVMLRVHHTIGDGMSLVGVGLKALRGLDGRSLDADSLGARRGGGGASRGGKRPSLLT--LLGKLL------RSFVEVLWLPVSAFDRPTPFRRPPEAAGGDVFSGSRRT-VAVPTVSLNLVKAIKNKAHATVNDVMVSLIGGAVRRYVADGSAGRGTDGSTKLRARALIPVALPRAAPWGDYDEGLQNKWVFCSIPMSMDEVS 654
            +P+W +  +      G      A+++ VHH +GDG+S V V    +  ++G+SL  D    +R      +G ++P  L   +L K +      R+ V+VL LP+   D  T    PP      +F+ S R  + VP +SL LVK+IKNK   TVNDV+ + +GGA+R+Y+   S        + L+ RAL+P + PR  P  D    L NKW   S  + + E +
Sbjct:  249 QPMWFVHLVRNSAPGGRS----AIVIEVHHVLGDGISQVMVLGDIVSDVNGKSLTIDDKKFKR----MMQGSQKPKSLMSRVLEKAIFAANTGRALVKVLGLPILGGDSQTLMSVPPS-----LFASSNRILIPVPPLSLALVKSIKNKLKVTVNDVLFAALGGAIRKYLEYRSDDALLVRGSSLKMRALMPYSFPR--PLDD----LHNKWTMISAELPVAEAT 454          
BLAST of mRNA_P-wetherbeei_contig21570.1.1 vs. uniprot
Match: A0A7S4WGW3_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4WGW3_9DINO)

HSP 1 Score: 85.5 bits (210), Expect = 1.330e-15
Identity = 72/224 (32.14%), Postives = 104/224 (46.43%), Query Frame = 1
Query:   10 PLWRMRRI-VEGGTDGXXXXXXAVMLRVHHTIGDGMSLVGVGLKALRGLDGRSLDADSLGARRGGGGASRGGKRPSLLTLL---------GKLLRSFVEVLWLPVSAFDRPTPFRRP-PEAAGGDVFSGSRRTVAVPTVSLNLVKAIKNKAHATVNDVMVSLIGGAVRRYVADGSAGRGTDGSTKLRARALIPVALPRAAPWGDYDEGLQNKWVFCSIPMSMDE 648
            PLWR+  I V+   +       A++LR+HH IGDG S+  V     R  DG+   A  L  R     A+   +R    +L             ++SF+    +P    +  T F RP  E   G  F G+R  V VP  SL  VKA K  A  ++NDV++S   GAVRRY  +           +LR RALIP+A P A   G  ++ + N + F S  +++ +
Sbjct:  152 PLWRVHLIPVQQAGE-----LPALLLRIHHCIGDGSSISVVFNGIARDADGKPAGATPLMQRL----ANELARRQQACSLAKACRSVAAGADAVKSFLSNASMPYRPLETDTAFNRPRAERRRGTDFGGARHVVYVPPFSLAYVKACKGAARVSLNDVVLSAASGAVRRY-CERRGDPAVSSGRRLRMRALIPIANPNAGG-GSPEDQMANNFAFVSARLALSQ 364          
BLAST of mRNA_P-wetherbeei_contig21570.1.1 vs. uniprot
Match: B7GBM5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GBM5_PHATC)

HSP 1 Score: 84.7 bits (208), Expect = 2.240e-15
Identity = 73/218 (33.49%), Postives = 105/218 (48.17%), Query Frame = 1
Query:   10 PLWRMRRIVEGGTDGXXXXXXAVMLRVHHTIGDGMSLVGVGLKALRGLDGRSLDADSLGARRGGGGASRGGKRPSLLTLLGKLLRSFVEVLWLPVSAFDRPTPFRRPPEAAGGDVFSGSRRTVAVPTVSLNLVKAIKNKAHATVNDVMVSLIGGAVRRYVADGSAGRGTDGSTKLRARALIPVALPRAAPWGDYDE-GLQNKWVFCSIPMSMDEVSMV 660
            P W    +VE   +G      AV+LR+HH + DG+SLV V  K +   DG  + +  L          +  K  +   L   L+R   +VL L +S  D PT F  P +     V S  R  V  PT SL  VK +K  A+ TVND++++ +  AV  Y    S          L++RAL+P+ALPR+A   ++    L+NKW   S  MS+  V +V
Sbjct:  158 PWWEFL-VVENVGEGES----AVVLRMHHALADGISLVHVFEKFITYEDGSPVLSIILSNMAQKSKVEKTHKT-NPFRLAWMLVRDATKVLTLGLSRSDDPTIFTEPNQTY---VHSQHRECVVFPTFSLAFVKRLKTAANVTVNDILMTAVSQAVHEYCRAESCSVLMGKGASLQSRALLPIALPRSASDLEHPSTALRNKWCLVSANMSIGCVDLV 366          
BLAST of mRNA_P-wetherbeei_contig21570.1.1 vs. uniprot
Match: A0A507FD21_9FUNG (Diacylglycerol O-acyltransferase n=2 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FD21_9FUNG)

HSP 1 Score: 83.6 bits (205), Expect = 5.410e-15
Identity = 71/217 (32.72%), Postives = 104/217 (47.93%), Query Frame = 1
Query:    7 KPLWRMRRIVEGGTDGXXXXXXAVMLRVHHTIGDGMSLVGVGLKALRGLDGRSL---DADSLGARRGGGGASRGGKRPSLLTLLGKLLRSFVEVLWLPVSAFDRPTPFRRPPEAAGGDVFS-GSRRTVAVPTVSLNLVKAIKNKAHATVNDVMVSLIGGAVRRYVADGSAGRGTDGSTKLRARALIPVALPRAAPWGDYDEG-LQNKWVFCSIPMSM 642
            +PLW    +    T G      A++L +HH IGDGMSLV          DG++L   DA            S+  KR +       ++R+F +++   V   D  T  + P +   G V+  G R+    P +SL  VK IKN    +VND+M S +GGA+RRY+   +       S  L+ R L+P A PR AP  D  +  L+N W   S+P+S+
Sbjct:  144 RPLWYFHLLEN--TSGLS----AIVLELHHAIGDGMSLVLFFSSLYTDKDGQNLPMPDATKT--------VSKSKKRVNPYYAAAVIVRAFFKIVLGSVIMADSQTLIKTPHQ---GFVYDHGVRKIYQFPAMSLEAVKEIKNAVGCSVNDIMTSALGGALRRYLRHRNDPLVY--SPFLQIRTLMPYAFPRRAPVPDQPQSILKNGWTLISVPLSV 341          
BLAST of mRNA_P-wetherbeei_contig21570.1.1 vs. uniprot
Match: A0A7S4SUT1_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SUT1_9DINO)

HSP 1 Score: 83.2 bits (204), Expect = 8.520e-15
Identity = 70/223 (31.39%), Postives = 105/223 (47.09%), Query Frame = 1
Query:   10 PLWRMRRI-VEGGTDGXXXXXXAVMLRVHHTIGDGMSLVGVGLKALRGLDGRSLD--------ADSLGARRGGGGASRGGKRPSLLTLLGKLLRSFVEVLWLPVSAFDRPTPFRRP-PEAAGGDVFSGSRRTVAVPTVSLNLVKAIKNKAHATVNDVMVSLIGGAVRRYVADGSAGRGTDGSTKLRARALIPVALPRAAPWGDYDEGLQNKWVFCSIPMSMDE 648
            PLWR+  I ++   +       A++LR+HH IGDG S+  V     R  DG+           A+ L  R+   G ++  +    + +    ++SF+    +P    +  T F +P  E   G  F G+R  V VP  SL  VKA KN A  +VNDV+ S   GAVRRY  +           +LR RALIP+A P  +     D+ + N + F S  M++ +
Sbjct:  158 PLWRVHLIPIQQAGE-----LSALVLRMHHCIGDGSSIAAVFNGIARDADGKPAGDTPLMQRLANELARRQQACGLAKACRS---VAMGADAVKSFLSNASMPYRPLETDTAFTKPREERRRGTKFGGARHVVYVPPFSLAYVKACKNAARVSVNDVVFSAACGAVRRY-CERRGDPAVSSGRRLRMRALIPIANPNPSGRSPEDQ-VTNNFAFISARMAVSQ 370          
BLAST of mRNA_P-wetherbeei_contig21570.1.1 vs. uniprot
Match: A0A7S1Q518_NEODS (Hypothetical protein n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1Q518_NEODS)

HSP 1 Score: 80.9 bits (198), Expect = 4.790e-14
Identity = 74/218 (33.94%), Postives = 113/218 (51.83%), Query Frame = 1
Query:    1 QQKPLWRMRRI-VEGGTDGXXXXXXAVMLRVHHTIGDGMSLVGVGLKALRGLDGRSLDADSLGARRGGGGASRGGKRPSLLTLLGKLLR---SFV----EVLWLPVSAFDRPTPFRRPPEAAGGDVFSGSRRTVAVPTVSLNLVKAIKNKAH--ATVNDVMVSLIGGAVRRYVADGSAGRGTDGSTKLRARALIPVAL-PRAAPWGDYDEGLQNKWVF 621
            + KP W +  + VEG  +G       +++R+HH + DG+SLV      L+  DG++LD  S+   R      +GG++P+L T L  L+    SFV    +V+ L     D+PT F           +SG R  V  P+ SL L+KA+K+KA    TVNDV  +L  G +RR++        TD S ++R RAL P+AL  ++ P   Y   ++N + F
Sbjct:  162 KSKPWWEVHTVRVEGQKEGY------MVIRIHHALADGVSLVEAFAPLLKDKDGKALDLTSMFNPRH---LQKGGRKPALSTRLLNLVGFPVSFVVEVLKVVGLATLPGDKPTRF-----CHSQWPYSGPRIAVIFPSHSLALIKAMKDKAGKGTTVNDVEFALFAGTIRRFLQQHDPN--TDLS-RVRLRALTPLALLEQSDPETKYATMMRNLFTF 362          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21570.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGW4_9PHAE4.840e-2938.78WS_DGAT_C domain-containing protein n=1 Tax=Ectoca... [more]
W7U9R7_9STRA4.650e-2340.53O-acyltransferase WSD1 n=2 Tax=Monodopsidaceae Tax... [more]
A0A835ZBT8_9STRA6.800e-2236.09WS_DGAT_C domain-containing protein n=1 Tax=Tribon... [more]
A0A7S2W284_9STRA3.470e-2031.63Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A507DU59_9FUNG1.850e-1732.44Diacylglycerol O-acyltransferase n=1 Tax=Powellomy... [more]
A0A7S4WGW3_9DINO1.330e-1532.14Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
B7GBM5_PHATC2.240e-1533.49Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A507FD21_9FUNG5.410e-1532.72Diacylglycerol O-acyltransferase n=2 Tax=Chytriomy... [more]
A0A7S4SUT1_9DINO8.520e-1531.39Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A7S1Q518_NEODS4.790e-1433.94Hypothetical protein n=1 Tax=Neobodo designis TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig21570contigP-wetherbeei_contig21570:166..885 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2850.Phatr49708
PFAMsDUF1298,WES_acyltransf
Model size678
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue4.21e-16
EggNOG OGs2CY8S@1|root,2S2TJ@2759|Eukaryota
DescriptionProtein of unknown function (DUF1298)
Cds size657
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186229.4120462-UTR-P-wetherbeei_contig21570:165..1861683186229.4120462-UTR-P-wetherbeei_contig21570:165..186Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig21570 166..186 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186229.4224863-CDS-P-wetherbeei_contig21570:186..6561683186229.4224863-CDS-P-wetherbeei_contig21570:186..656Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig21570 187..656 +
1683186229.431227-CDS-P-wetherbeei_contig21570:698..8851683186229.431227-CDS-P-wetherbeei_contig21570:698..885Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig21570 699..885 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig21570.1.1prot_P-wetherbeei_contig21570.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig21570 187..885 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig21570.1.1

>prot_P-wetherbeei_contig21570.1.1 ID=prot_P-wetherbeei_contig21570.1.1|Name=mRNA_P-wetherbeei_contig21570.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=219bp
MRRIVEGGTDGGGGGGGAVMLRVHHTIGDGMSLVGVGLKALRGLDGRSLD
ADSLGARRGGGGASRGGKRPSLLTLLGKLLRSFVEVLWLPVSAFDRPTPF
RRPPEAAGGDVFSGSRRTVAVPTVSLNLVKAIKNKAHATVNDVMVSLIGG
AVRRYVADGSAGRGTDGSTKLRARALIPVALPRAAPWGDYDEGLQNKWVF
CSIPMSMDEVSMVLLLTSL
back to top

mRNA from alignment at P-wetherbeei_contig21570:166..885+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig21570.1.1 ID=mRNA_P-wetherbeei_contig21570.1.1|Name=mRNA_P-wetherbeei_contig21570.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=720bp|location=Sequence derived from alignment at P-wetherbeei_contig21570:166..885+ (Phaeothamnion wetherbeei SAG_119_79)
CAGCAGAAACCGCTCTGGCGCATGCGGCGGATCGTGGAGGGCGGCACTGA CGGCGGCGGTGGCGGCGGCGGCGCGGTAATGTTAAGGGTCCACCACACGA TCGGCGACGGCATGAGCCTCGTTGGCGTCGGGCTCAAGGCGCTCCGGGGG CTCGACGGCCGCTCCCTTGACGCCGACTCCTTGGGCGCGCGTCGGGGCGG CGGTGGTGCCAGCCGCGGCGGCAAGCGGCCGTCGCTACTGACGCTTCTCG GCAAGCTCCTGCGGTCGTTCGTTGAGGTTCTCTGGTTGCCCGTATCGGCC TTCGACAGGCCGACGCCCTTCCGCCGGCCTCCGGAGGCCGCCGGCGGCGA CGTTTTCTCGGGGAGCCGCCGGACGGTCGCCGTCCCGACCGTTTCCCTGA ACCTCGTCAAGGCCATCAAGAACAAGGCGCATGCGACCGTCAACGATGTC ATGGTGAGCCTCATCGGCGGTGCGGTGCGCCGCTACGTCGCGTGGGCCGC CGACGGCGGTGGCGAAAATGGCGGCGGCAACAGCGACGGCAGCGCCGGCC GCGGCACCGATGGCAGCACAAAGCTGCGCGCAAGAGCGCTGATCCCGGTG GCGCTCCCGCGGGCGGCGCCGTGGGGCGATTACGACGAGGGGCTGCAGAA CAAGTGGGTATTTTGCTCCATTCCCATGTCCATGGATGAGGTGAGCATGG TTTTGTTACTTACCAGCCTG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig21570:166..885+

>mRNA_P-wetherbeei_contig21570.1.1 ID=mRNA_P-wetherbeei_contig21570.1.1|Name=mRNA_P-wetherbeei_contig21570.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=657bp|location=Sequence derived from alignment at P-wetherbeei_contig21570:166..885+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGGCGGATCGTGGAGGGCGGCACTGACGGCGGCGGTGGCGGCGGCGG
CGCGGTAATGTTAAGGGTCCACCACACGATCGGCGACGGCATGAGCCTCG
TTGGCGTCGGGCTCAAGGCGCTCCGGGGGCTCGACGGCCGCTCCCTTGAC
GCCGACTCCTTGGGCGCGCGTCGGGGCGGCGGTGGTGCCAGCCGCGGCGG
CAAGCGGCCGTCGCTACTGACGCTTCTCGGCAAGCTCCTGCGGTCGTTCG
TTGAGGTTCTCTGGTTGCCCGTATCGGCCTTCGACAGGCCGACGCCCTTC
CGCCGGCCTCCGGAGGCCGCCGGCGGCGACGTTTTCTCGGGGAGCCGCCG
GACGGTCGCCGTCCCGACCGTTTCCCTGAACCTCGTCAAGGCCATCAAGA
ACAAGGCGCATGCGACCGTCAACGATGTCATGGTGAGCCTCATCGGCGGT
GCGGTGCGCCGCTACGTCGCCGACGGCAGCGCCGGCCGCGGCACCGATGG
CAGCACAAAGCTGCGCGCAAGAGCGCTGATCCCGGTGGCGCTCCCGCGGG
CGGCGCCGTGGGGCGATTACGACGAGGGGCTGCAGAACAAGTGGGTATTT
TGCTCCATTCCCATGTCCATGGATGAGGTGAGCATGGTTTTGTTACTTAC
CAGCCTG
back to top