mRNA_P-wetherbeei_contig21568.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig21568.1.1
Unique NamemRNA_P-wetherbeei_contig21568.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig21568.1.1 vs. uniprot
Match: A0A7C2R2E4_9HYPH (ABC transporter substrate-binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2R2E4_9HYPH)

HSP 1 Score: 527 bits (1357), Expect = 5.950e-186
Identity = 272/328 (82.93%), Postives = 293/328 (89.33%), Query Frame = 1
Query:   25 LAVPAIAQDTVKIGVTQPLTGAFAASGNYVLQGAKIAEAEINKAGGVLGKKIQLVVEDNKSNPTEAVATAEKLITKDKVPVMLGAWSSTLTLAVMPKLEEYGVPMLVETSSSGKITTSGNPWIFRISPTSEMEAKAFEPLVKKLGIKKADLLGTNNDFGLGAMQEFSKMLKASGVAIGASETMDPKAVDFSAQLAKIKASGGDTLFVTTAVEQITLILRQAKEQQVKARIITTGGSNSPDQLIQQAGDAANGSSHLVFFTPWFPDAVKNPDLATRFVKEWNARGHNVGGLTEGFRGWDGITTIVAAIKAAGKADPKAIQAALWKVKVK 1008
            LA  A AQDT+KIGVTQPLTGAFAASGNYV QGA+IAE EINKAGGVLGKKIQL+VEDNKSNPTEAVATAEKLI +DKVPV++GAWSSTLTLAVMPKLEEY VPMLVETSSSGKITTSGNP+IFRISPTSEMEAKAF PL KK+ IKKAD L TNNDFGLGA +EFS+  K  GV IG  ETMDPKA DFSAQLAKIKASGGDTLFVTTAVEQITLIL+QAK+QQ+ ARIITTGGSNSPDQLIQQAG AA+GS HLVFFTPWFP+AVKNPD+A RFV  WN + H+VGGLTEGFRGWDG+  IV AIKAAGKA+P+AI  ALW VKVK
Sbjct:   20 LAGTAAAQDTIKIGVTQPLTGAFAASGNYVAQGARIAEEEINKAGGVLGKKIQLIVEDNKSNPTEAVATAEKLIVRDKVPVLMGAWSSTLTLAVMPKLEEYKVPMLVETSSSGKITTSGNPYIFRISPTSEMEAKAFTPLFKKMNIKKADFLATNNDFGLGASKEFSEAAKKEGVQIGVMETMDPKATDFSAQLAKIKASGGDTLFVTTAVEQITLILKQAKDQQLAARIITTGGSNSPDQLIQQAGAAADGSYHLVFFTPWFPEAVKNPDIAKRFVALWNEKKHHVGGLTEGFRGWDGLHVIVEAIKAAGKAEPEAITKALWNVKVK 347          
BLAST of mRNA_P-wetherbeei_contig21568.1.1 vs. uniprot
Match: A0A6N6T1H0_9HYPH (ABC transporter substrate-binding protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6T1H0_9HYPH)

HSP 1 Score: 525 bits (1351), Expect = 4.530e-185
Identity = 272/327 (83.18%), Postives = 291/327 (88.99%), Query Frame = 1
Query:   25 LAVPAIAQDTVKIGVTQPLTGAFAASGNYVLQGAKIAEAEINKAGGVLGKKIQLVVEDNKSNPTEAVATAEKLITKDKVPVMLGAWSSTLTLAVMPKLEEYGVPMLVETSSSGKITTSGNPWIFRISPTSEMEAKAFEPLVKKLGIKKADLLGTNNDFGLGAMQEFSKMLKASGVAIGASETMDPKAVDFSAQLAKIKASGGDTLFVTTAVEQITLILRQAKEQQVKARIITTGGSNSPDQLIQQAGDAANGSSHLVFFTPWFPDAVKNPDLATRFVKEWNARGHNVGGLTEGFRGWDGITTIVAAIKAAGKADPKAIQAALWKVKV 1005
            LA  A AQ+ +KIGVTQPLTGAFAASGNYV QGAKIAE EINKAGGVLG+KIQL+VEDNKSNPTEAVATAEKLI KDKVPVM+GAWSSTLTLAVMPKLEEY VPMLVETSSSGKIT SGNP+IFRISPTSEMEAKAF PL KKLGIKKAD L TNNDFGLGA +EFS+  K  GV +G  ETMDPKA DFSAQLAKIKASG DTLFVTTAVEQITL+L+QAK+QQ+ ARIITTGGSNSPDQLI QAG AANGS HLVFFTPWFP+AVKNPD+A +FV  WN + +NVGGLTEGFRGWDGI TIVAAIKAAGKA+P AIQ ALW VKV
Sbjct:   18 LAGAAAAQEPIKIGVTQPLTGAFAASGNYVAQGAKIAEEEINKAGGVLGRKIQLIVEDNKSNPTEAVATAEKLIVKDKVPVMMGAWSSTLTLAVMPKLEEYKVPMLVETSSSGKITVSGNPYIFRISPTSEMEAKAFTPLFKKLGIKKADFLSTNNDFGLGAAKEFSEAAKREGVTVGVMETMDPKATDFSAQLAKIKASGSDTLFVTTAVEQITLLLKQAKDQQLIARIITTGGSNSPDQLIAQAGAAANGSYHLVFFTPWFPEAVKNPDIAKKFVALWNEKKYNVGGLTEGFRGWDGIHTIVAAIKAAGKAEPAAIQQALWGVKV 344          
BLAST of mRNA_P-wetherbeei_contig21568.1.1 vs. uniprot
Match: A0A1H1KBR7_9HYPH (Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=3 Tax=unclassified Hyphomicrobiales TaxID=41292 RepID=A0A1H1KBR7_9HYPH)

HSP 1 Score: 510 bits (1313), Expect = 2.740e-179
Identity = 263/336 (78.27%), Postives = 289/336 (86.01%), Query Frame = 1
Query:    1 LGSAAYLGLAVPAIAQDTVKIGVTQPLTGAFAASGNYVLQGAKIAEAEINKAGGVLGKKIQLVVEDNKSNPTEAVATAEKLITKDKVPVMLGAWSSTLTLAVMPKLEEYGVPMLVETSSSGKITTSGNPWIFRISPTSEMEAKAFEPLVKKLGIKKADLLGTNNDFGLGAMQEFSKMLKASGVAIGASETMDPKAVDFSAQLAKIKASGGDTLFVTTAVEQITLILRQAKEQQVKARIITTGGSNSPDQLIQQAGDAANGSSHLVFFTPWFPDAVKNPDLATRFVKEWNARGHNVGGLTEGFRGWDGITTIVAAIKAAGKADPKAIQAALWKVKVK 1008
            LG+   + LA  A AQDTVKIGVTQPLTGAFAASGNYV QGA++A  +INK GGVLGKK+QLVVEDNKSNPTEAV TAE+LI KDKVPV++GAWSSTLTLAVMPKLEEY VPMLVETSSSGKITTSGNP+IFRISPTSEMEA AF PL K LGIKKA+ L TNNDFG G+MQEF+KML   G+ IGA+ETM+P A D SAQLAKIKASGGDTLFVTT V Q+TLIL+QAK+QQ+K RIITTGGS +PDQLI+QA DAANGS HLVFFTPWFPDAVKNPD+A +F   W A  +NVGGLTEGFRGWDGI TI  AIK AGKADP+AIQ ALW VKVK
Sbjct:   10 LGATGAILLASAAFAQDTVKIGVTQPLTGAFAASGNYVAQGAQLAAEQINKGGGVLGKKLQLVVEDNKSNPTEAVGTAERLIVKDKVPVLMGAWSSTLTLAVMPKLEEYKVPMLVETSSSGKITTSGNPYIFRISPTSEMEATAFSPLAKTLGIKKANFLVTNNDFGKGSMQEFTKMLTGQGIEIGAAETMEPSATDLSAQLAKIKASGGDTLFVTTDVAQLTLILKQAKDQQIKLRIITTGGSVAPDQLIEQAADAANGSYHLVFFTPWFPDAVKNPDVAQQFTTAWTAAKYNVGGLTEGFRGWDGIYTIAEAIKLAGKADPEAIQQALWTVKVK 345          
BLAST of mRNA_P-wetherbeei_contig21568.1.1 vs. uniprot
Match: A0A537R3R6_9PROT (ABC transporter substrate-binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537R3R6_9PROT)

HSP 1 Score: 508 bits (1309), Expect = 7.510e-179
Identity = 262/324 (80.86%), Postives = 283/324 (87.35%), Query Frame = 1
Query:   37 AIAQDTVKIGVTQPLTGAFAASGNYVLQGAKIAEAEINKAGGVLGKKIQLVVEDNKSNPTEAVATAEKLITKDKVPVMLGAWSSTLTLAVMPKLEEYGVPMLVETSSSGKITTSGNPWIFRISPTSEMEAKAFEPLVKKLGIKKADLLGTNNDFGLGAMQEFSKMLKASGVAIGASETMDPKAVDFSAQLAKIKASGGDTLFVTTAVEQITLILRQAKEQQVKARIITTGGSNSPDQLIQQAGDAANGSSHLVFFTPWFPDAVKNPDLATRFVKEWNARGHNVGGLTEGFRGWDGITTIVAAIKAAGKADPKAIQAALWKVKVK 1008
            A AQDT+KIGVTQPLTGAFAASGNYV QGAK+AE  IN AGGVLGKKI+L+VEDNKSNPTEA ATAEKLI KDKVPVMLGAW S LTLA+MPKLEEY VPM+VETSSSGKITTSGNP+IFRISPTSEMEAKAF PL K LGIKKAD L TNNDFGLGA +EFS+   A GV +G  ETMDPKA DFSAQLAKIKASGGDT+FVTTAVEQITLIL+QAK+QQ+ ARIITTGGSNSP+QLIQQAG+AANGS HLVFFTPWF DAVKNPD+A +FV  WN + + VGGLTEGFRGWDGI  IV  IKAAGKAD +AI  ALW VKVK
Sbjct:   26 ASAQDTIKIGVTQPLTGAFAASGNYVAQGAKLAEEAINTAGGVLGKKIELIVEDNKSNPTEAAATAEKLIVKDKVPVMLGAWGSGLTLAIMPKLEEYKVPMVVETSSSGKITTSGNPYIFRISPTSEMEAKAFTPLFKSLGIKKADFLSTNNDFGLGAAKEFSEAATAQGVQVGVRETMDPKATDFSAQLAKIKASGGDTVFVTTAVEQITLILKQAKDQQLGARIITTGGSNSPEQLIQQAGEAANGSLHLVFFTPWFTDAVKNPDVANKFVAAWNEKKYPVGGLTEGFRGWDGIHVIVEGIKAAGKADSEAITTALWGVKVK 349          
BLAST of mRNA_P-wetherbeei_contig21568.1.1 vs. uniprot
Match: A0A327LDY2_9HYPH (ABC transporter substrate-binding protein n=4 Tax=Rhodoplanes TaxID=29407 RepID=A0A327LDY2_9HYPH)

HSP 1 Score: 506 bits (1304), Expect = 6.890e-178
Identity = 258/328 (78.66%), Postives = 286/328 (87.20%), Query Frame = 1
Query:   25 LAVPAIAQDTVKIGVTQPLTGAFAASGNYVLQGAKIAEAEINKAGGVLGKKIQLVVEDNKSNPTEAVATAEKLITKDKVPVMLGAWSSTLTLAVMPKLEEYGVPMLVETSSSGKITTSGNPWIFRISPTSEMEAKAFEPLVKKLGIKKADLLGTNNDFGLGAMQEFSKMLKASGVAIGASETMDPKAVDFSAQLAKIKASGGDTLFVTTAVEQITLILRQAKEQQVKARIITTGGSNSPDQLIQQAGDAANGSSHLVFFTPWFPDAVKNPDLATRFVKEWNARGHNVGGLTEGFRGWDGITTIVAAIKAAGKADPKAIQAALWKVKVK 1008
            LA  A+AQ+T+KIGVTQPLTGAFAASGNYV QGA+IAE EIN AGGVLGKKIQLV+EDNKSNPTEAVAT EKLI +DKVPV++GAWSSTLTLAVMPKL+EY VPM+VETSSSGKITTSGNP++FRISPTSEMEA AF+PLV KLGIKKAD L TNNDFG+G+  E+SKMLK  GVA+G  ETMDPKA DFSAQL +IKASGGDTLFVTTAVEQ+TLIL+QAKE Q+ ARIITTGGSNSPDQLI QAGDAANGS H VFF PWFP+ V NP+ A R++ EW  RGH  GGLTEGFRG+DGI TI  AIK AGKA+P AI+ ALWK KVK
Sbjct:   18 LAGTALAQETIKIGVTQPLTGAFAASGNYVAQGARIAEDEINAAGGVLGKKIQLVIEDNKSNPTEAVATVEKLIVRDKVPVIMGAWSSTLTLAVMPKLQEYKVPMVVETSSSGKITTSGNPYVFRISPTSEMEAVAFKPLVAKLGIKKADFLNTNNDFGIGSAAEYSKMLKGQGVAVGVMETMDPKATDFSAQLTRIKASGGDTLFVTTAVEQVTLILKQAKELQLNARIITTGGSNSPDQLIAQAGDAANGSFHTVFFPPWFPEVVTNPEPAKRYMTEWQKRGHEPGGLTEGFRGYDGIFTIAEAIKIAGKAEPAAIKDALWKTKVK 345          
BLAST of mRNA_P-wetherbeei_contig21568.1.1 vs. uniprot
Match: A0A447D0Z9_9HYPH (Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein n=2 Tax=Rhodoplanes piscinae TaxID=444923 RepID=A0A447D0Z9_9HYPH)

HSP 1 Score: 503 bits (1294), Expect = 5.360e-176
Identity = 253/324 (78.09%), Postives = 283/324 (87.35%), Query Frame = 1
Query:   34 PAIAQDTVKIGVTQPLTGAFAASGNYVLQGAKIAEAEINKAGGVLGKKIQLVVEDNKSNPTEAVATAEKLITKDKVPVMLGAWSSTLTLAVMPKLEEYGVPMLVETSSSGKITTSGNPWIFRISPTSEMEAKAFEPLVKKLGIKKADLLGTNNDFGLGAMQEFSKMLKASGVAIGASETMDPKAVDFSAQLAKIKASGGDTLFVTTAVEQITLILRQAKEQQVKARIITTGGSNSPDQLIQQAGDAANGSSHLVFFTPWFPDAVKNPDLATRFVKEWNARGHNVGGLTEGFRGWDGITTIVAAIKAAGKADPKAIQAALWKVKV 1005
            P  AQ+T+KIGV+QPLTGAFAASGNYV QGA+IAE EIN AGGVLGKKIQLV+EDNKSNPTEAVAT EKLI +DKVPV++GAWSSTLTLAVMPK++EY VP++VETSSSGKITT+GNP++FRISPTSEMEA +F PLV KLGIKKAD L TNNDFG+G+  EF+KMLKA GV +G  ETMDPKA DFSAQL +IKASGGDTLFVTTAVEQ TLIL+QAKE Q+KARI+TTGGSNSPDQL+ QAGDAANGS H VFF PWFPD VKNPD A R++ EW  RGH  GGLTEGFRG+DGI T V AIK AGKA+P AI+ ALWKVKV
Sbjct:   45 PVAAQETIKIGVSQPLTGAFAASGNYVAQGARIAEDEINAAGGVLGKKIQLVIEDNKSNPTEAVATVEKLIVRDKVPVIMGAWSSTLTLAVMPKMQEYKVPLVVETSSSGKITTAGNPYVFRISPTSEMEAMSFRPLVAKLGIKKADFLNTNNDFGIGSATEFAKMLKAEGVQVGVLETMDPKANDFSAQLTRIKASGGDTLFVTTAVEQNTLILKQAKELQLKARIVTTGGSNSPDQLVTQAGDAANGSYHTVFFPPWFPDVVKNPDAAKRYMAEWKKRGHEPGGLTEGFRGYDGIFTAVEAIKVAGKAEPAAIKDALWKVKV 368          
BLAST of mRNA_P-wetherbeei_contig21568.1.1 vs. uniprot
Match: J6LCT6_9RHOB (Branched-chain amino acid ABC transporter, amino acid-binding protein n=1 Tax=Rhodovulum sp. PH10 TaxID=1187851 RepID=J6LCT6_9RHOB)

HSP 1 Score: 480 bits (1235), Expect = 2.150e-167
Identity = 243/327 (74.31%), Postives = 275/327 (84.10%), Query Frame = 1
Query:   25 LAVPAIAQDTVKIGVTQPLTGAFAASGNYVLQGAKIAEAEINKAGGVLGKKIQLVVEDNKSNPTEAVATAEKLITKDKVPVMLGAWSSTLTLAVMPKLEEYGVPMLVETSSSGKITTSGNPWIFRISPTSEMEAKAFEPLVKKLGIKKADLLGTNNDFGLGAMQEFSKMLKASGVAIGASETMDPKAVDFSAQLAKIKASGGDTLFVTTAVEQITLILRQAKEQQVKARIITTGGSNSPDQLIQQAGDAANGSSHLVFFTPWFPDAVKNPDLATRFVKEWNARGHNVGGLTEGFRGWDGITTIVAAIKAAGKADPKAIQAALWKVKV 1005
            +A PA AQDT+KIGVTQPLTGAFAASGNYV QGAKIAE EIN  GGVLGKKIQLV+EDNKSNPTEAVAT EKLI +DKVP ++GAWSSTLTLAVMPK+ EY VP++VETSSSGKITT+GNP++FRI+PTS+MEA AF PL+ KL IKKA  L TNNDFG+G+ + +S+ LK  GV IG  ETMDPKA DFSAQL  IKASG DTLFVTTAVEQITL+L+QAKE Q+ ARIITTGGSNSPDQLI QAG AA+GS H+VFF PWFPD VKNP+ A  ++ EW  RGH  GG+TEGFRG+DGI TI  AIK AGKA+P AI+ ALWKV V
Sbjct:   18 MAAPAFAQDTIKIGVTQPLTGAFAASGNYVAQGAKIAEDEINAKGGVLGKKIQLVIEDNKSNPTEAVATVEKLIVRDKVPAIMGAWSSTLTLAVMPKVMEYKVPLVVETSSSGKITTAGNPYVFRIAPTSDMEAVAFTPLIDKLNIKKAAFLNTNNDFGIGSAKAYSEALKKKGVEIGVMETMDPKATDFSAQLTSIKASGADTLFVTTAVEQITLVLKQAKELQLDARIITTGGSNSPDQLIAQAGSAADGSYHVVFFPPWFPDVVKNPEAAKSYMTEWKKRGHEPGGMTEGFRGYDGIYTIAEAIKVAGKAEPAAIKDALWKVTV 344          
BLAST of mRNA_P-wetherbeei_contig21568.1.1 vs. uniprot
Match: A0A3S0DUF5_9HYPH (ABC transporter substrate-binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3S0DUF5_9HYPH)

HSP 1 Score: 469 bits (1208), Expect = 2.640e-163
Identity = 236/322 (73.29%), Postives = 272/322 (84.47%), Query Frame = 1
Query:   43 AQDTVKIGVTQPLTGAFAASGNYVLQGAKIAEAEINKAGGVLGKKIQLVVEDNKSNPTEAVATAEKLITKDKVPVMLGAWSSTLTLAVMPKLEEYGVPMLVETSSSGKITTSGNPWIFRISPTSEMEAKAFEPLVKKLGIKKADLLGTNNDFGLGAMQEFSKMLKASGVAIGASETMDPKAVDFSAQLAKIKASGGDTLFVTTAVEQITLILRQAKEQQVKARIITTGGSNSPDQLIQQAGDAANGSSHLVFFTPWFPDAVKNPDLATRFVKEWNARGHNVGGLTEGFRGWDGITTIVAAIKAAGKADPKAIQAALWKVKVK 1008
            AQ T+KIGVTQPLTGAFAASGNYV QGAKIAE EIN AGGVLGKKI+L++EDNKSNPTEAV+TAEKLI +DKVPVM+GAWSSTLTLA+MPKL EY VPM+VETS+S KIT SGNP+IFRI PTSE+EA  F+P   KLGIKKA  L TNNDFG+G+ QE +K LKA G+ +G  ETMDPKA DFSAQL ++K+SG DT+FVTTAVEQ TLILRQA + QV  +IIT GGSNSPDQLI QAG+AANGS H VFF PWFP+  K P++A R++ EWN RGHN+GGLTEGFRG+DGI  I  AIK AGKA+P+AI+ ALWKV+VK
Sbjct:   23 AQGTIKIGVTQPLTGAFAASGNYVAQGAKIAEDEINAAGGVLGKKIELIIEDNKSNPTEAVSTAEKLIVRDKVPVMMGAWSSTLTLAIMPKLMEYEVPMVVETSTSPKITVSGNPYIFRIGPTSEIEAIKFKPRFAKLGIKKASFLNTNNDFGIGSAQEIAKALKAEGIEVGIFETMDPKATDFSAQLTRLKSSGSDTIFVTTAVEQNTLILRQAVDLQVGQKIITLGGSNSPDQLIVQAGEAANGSYHTVFFPPWFPEVTKYPEIAQRYMAEWNKRGHNIGGLTEGFRGYDGIHVIAEAIKVAGKAEPEAIRQALWKVRVK 344          
BLAST of mRNA_P-wetherbeei_contig21568.1.1 vs. uniprot
Match: A0A3S0GT98_9HYPH (Amino acid ABC transporter substrate-binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3S0GT98_9HYPH)

HSP 1 Score: 464 bits (1195), Expect = 2.410e-161
Identity = 232/322 (72.05%), Postives = 272/322 (84.47%), Query Frame = 1
Query:   37 AIAQDTVKIGVTQPLTGAFAASGNYVLQGAKIAEAEINKAGGVLGKKIQLVVEDNKSNPTEAVATAEKLITKDKVPVMLGAWSSTLTLAVMPKLEEYGVPMLVETSSSGKITTSGNPWIFRISPTSEMEAKAFEPLVKKLGIKKADLLGTNNDFGLGAMQEFSKMLKASGVAIGASETMDPKAVDFSAQLAKIKASGGDTLFVTTAVEQITLILRQAKEQQVKARIITTGGSNSPDQLIQQAGDAANGSSHLVFFTPWFPDAVKNPDLATRFVKEWNARGHNVGGLTEGFRGWDGITTIVAAIKAAGKADPKAIQAALWKVK 1002
            A AQDT+KIGVTQPLTGA AA+GNYV+QGAK+A  +IN AGGVLGKK++L++EDNKSNPTEAVAT EKLI KDK PV++GAWSST TLAVMPKLEEY VPM+VETSSSGKITTSGNP+IFRISPTSEMEAKAF  +VK   IKKAD L  NND+G G+  EFSKM+K +G+A+G  E MDPKA D SAQ+AKIK+SGGDTL +TT+VEQITL+L+QAK+QQ+  +II+TGGS SPDQLIQQAG+AANGS HLVFF PWFPD +  P++  +F  +W   G N  GLTEGFRG+DGI T+VA IKAAGKADP+AI+  LWKVK
Sbjct:   22 ASAQDTIKIGVTQPLTGAVAAAGNYVVQGAKVAAEQINAAGGVLGKKVELLIEDNKSNPTEAVATVEKLIVKDKAPVLMGAWSSTFTLAVMPKLEEYKVPMVVETSSSGKITTSGNPYIFRISPTSEMEAKAFGKVVKSYNIKKADFLSVNNDWGRGSADEFSKMMKENGIAVGTIEYMDPKATDLSAQIAKIKSSGGDTLILTTSVEQITLVLKQAKDQQLPHKIISTGGSASPDQLIQQAGEAANGSYHLVFFAPWFPDMLTYPEVGKKFAADWVKMGFNPAGLTEGFRGYDGILTVVAGIKAAGKADPEAIREGLWKVK 343          
BLAST of mRNA_P-wetherbeei_contig21568.1.1 vs. uniprot
Match: A0A1F7T0T7_9BACT (ABC transporter substrate-binding protein n=1 Tax=Candidatus Tectomicrobia bacterium RIFCSPLOWO2_02_FULL_70_19 TaxID=1802342 RepID=A0A1F7T0T7_9BACT)

HSP 1 Score: 463 bits (1192), Expect = 8.800e-161
Identity = 234/321 (72.90%), Postives = 268/321 (83.49%), Query Frame = 1
Query:   43 AQDTVKIGVTQPLTGAFAASGNYVLQGAKIAEAEINKAGGVLGKKIQLVVEDNKSNPTEAVATAEKLITKDKVPVMLGAWSSTLTLAVMPKLEEYGVPMLVETSSSGKITTSGNPWIFRISPTSEMEAKAFEPLVKKLGIKKADLLGTNNDFGLGAMQEFSKMLKASGVAIGASETMDPKAVDFSAQLAKIKASGGDTLFVTTAVEQITLILRQAKEQQVKARIITTGGSNSPDQLIQQAGDAANGSSHLVFFTPWFPDAVKNPDLATRFVKEWNARGHNVGGLTEGFRGWDGITTIVAAIKAAGKADPKAIQAALWKVKV 1005
            A + +KIGVTQPLTGA AASGNYV QGAKIAE+ +N  GGVLGKK+QL++EDNKSNP EAVATAEKLI +DK PV++GAWSST TLAVMPKL EYGVPM+VETSSSGKITTSGNPWIFRISPTS MEA A  P VKK  +KKAD L  NND+GLGA+ EFSKML+  G+ +GA ETMD KA D SAQLAKIKASGGDTLF+TT VEQITL+L+QAKEQ++  +IITTGGS+SPDQLI QAG AA  S H++FF PWFP+A   P++A  FV EW  RG+N  GLTEGFRG+DG+ TI AAI+ AGKADPKAIQAALW V+V
Sbjct:   26 AAEMIKIGVTQPLTGAVAASGNYVAQGAKIAESFLNAKGGVLGKKVQLIIEDNKSNPVEAVATAEKLIVRDKAPVLMGAWSSTYTLAVMPKLMEYGVPMVVETSSSGKITTSGNPWIFRISPTSAMEAVAMAPHVKKFNVKKADFLSVNNDWGLGAVAEFSKMLQKQGIQVGAKETMDAKAQDLSAQLAKIKASGGDTLFLTTGVEQITLVLKQAKEQRLTHKIITTGGSSSPDQLISQAGAAAENSYHILFFAPWFPEAAPYPNIAKDFVVEWKKRGYNFAGLTEGFRGYDGVMTIAAAIQKAGKADPKAIQAALWGVQV 346          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21568.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C2R2E4_9HYPH5.950e-18682.93ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A6N6T1H0_9HYPH4.530e-18583.18ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A1H1KBR7_9HYPH2.740e-17978.27Amino acid/amide ABC transporter substrate-binding... [more]
A0A537R3R6_9PROT7.510e-17980.86ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A327LDY2_9HYPH6.890e-17878.66ABC transporter substrate-binding protein n=4 Tax=... [more]
A0A447D0Z9_9HYPH5.360e-17678.09Leucine-, isoleucine-, valine-, threonine-, and al... [more]
J6LCT6_9RHOB2.150e-16774.31Branched-chain amino acid ABC transporter, amino a... [more]
A0A3S0DUF5_9HYPH2.640e-16373.29ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A3S0GT98_9HYPH2.410e-16172.05Amino acid ABC transporter substrate-binding prote... [more]
A0A1F7T0T7_9BACT8.800e-16172.90ABC transporter substrate-binding protein n=1 Tax=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig21568contigP-wetherbeei_contig21568:3..1010 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1187851.A33M_3623
PFAMsPeripla_BP_6
Model size1008
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue3.52e-168
EggNOG OGsCOG0683@1|root,COG0683@2|Bacteria,1NNXR@1224|Proteobacteria,2VEZD@28211|Alphaproteobacteria
DescriptionReceptor family ligand binding region
Cds size1008
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186229.224474-CDS-P-wetherbeei_contig21568:2..10101683186229.224474-CDS-P-wetherbeei_contig21568:2..1010Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig21568 3..1010 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig21568.1.1prot_P-wetherbeei_contig21568.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig21568 3..1010 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig21568.1.1

>prot_P-wetherbeei_contig21568.1.1 ID=prot_P-wetherbeei_contig21568.1.1|Name=mRNA_P-wetherbeei_contig21568.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=336bp
LGSAAYLGLAVPAIAQDTVKIGVTQPLTGAFAASGNYVLQGAKIAEAEIN
KAGGVLGKKIQLVVEDNKSNPTEAVATAEKLITKDKVPVMLGAWSSTLTL
AVMPKLEEYGVPMLVETSSSGKITTSGNPWIFRISPTSEMEAKAFEPLVK
KLGIKKADLLGTNNDFGLGAMQEFSKMLKASGVAIGASETMDPKAVDFSA
QLAKIKASGGDTLFVTTAVEQITLILRQAKEQQVKARIITTGGSNSPDQL
IQQAGDAANGSSHLVFFTPWFPDAVKNPDLATRFVKEWNARGHNVGGLTE
GFRGWDGITTIVAAIKAAGKADPKAIQAALWKVKVK
back to top

mRNA from alignment at P-wetherbeei_contig21568:3..1010-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig21568.1.1 ID=mRNA_P-wetherbeei_contig21568.1.1|Name=mRNA_P-wetherbeei_contig21568.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1008bp|location=Sequence derived from alignment at P-wetherbeei_contig21568:3..1010- (Phaeothamnion wetherbeei SAG_119_79)
CTGGGCTCAGCCGCATACCTTGGATTGGCCGTACCGGCGATCGCACAGGA CACCGTGAAGATCGGCGTCACGCAACCCCTCACCGGCGCGTTCGCAGCGT CCGGCAACTACGTGCTGCAGGGCGCCAAGATCGCCGAGGCCGAGATCAAC AAGGCCGGCGGTGTTCTGGGCAAAAAAATCCAGCTCGTCGTCGAGGACAA CAAGTCCAATCCGACCGAGGCCGTCGCTACCGCGGAAAAACTCATCACGA AGGACAAGGTTCCCGTGATGCTGGGTGCGTGGAGTTCCACCCTGACGCTC GCGGTGATGCCCAAGCTTGAGGAATACGGCGTTCCGATGCTGGTGGAGAC GTCATCCTCCGGCAAGATCACGACCTCCGGCAACCCCTGGATCTTCCGGA TCAGCCCGACGTCGGAGATGGAGGCGAAGGCGTTCGAGCCGCTCGTCAAG AAGCTCGGGATCAAGAAGGCCGACTTGCTCGGCACCAACAACGATTTCGG CCTGGGAGCGATGCAGGAGTTCAGCAAGATGCTGAAGGCCAGCGGCGTCG CGATCGGCGCCAGCGAGACGATGGACCCGAAGGCCGTCGACTTCTCCGCC CAGCTCGCCAAGATCAAGGCGTCGGGCGGCGATACGCTGTTCGTGACGAC CGCCGTCGAGCAGATCACCCTGATCCTGCGGCAAGCCAAGGAGCAGCAGG TCAAGGCCCGCATCATCACGACCGGCGGCTCCAACTCGCCCGACCAGTTG ATCCAGCAGGCGGGCGATGCCGCCAACGGGTCGTCTCATCTGGTGTTCTT CACACCCTGGTTCCCCGATGCCGTGAAGAACCCGGACCTGGCGACGCGCT TCGTCAAAGAGTGGAACGCGCGCGGCCACAACGTCGGCGGGCTCACCGAA GGTTTCCGCGGCTGGGATGGCATCACCACGATCGTCGCGGCGATCAAGGC CGCCGGCAAGGCCGATCCCAAGGCGATCCAGGCTGCCCTGTGGAAGGTCA AGGTGAAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig21568:3..1010-

>mRNA_P-wetherbeei_contig21568.1.1 ID=mRNA_P-wetherbeei_contig21568.1.1|Name=mRNA_P-wetherbeei_contig21568.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1008bp|location=Sequence derived from alignment at P-wetherbeei_contig21568:3..1010- (Phaeothamnion wetherbeei SAG_119_79)
CTGGGCTCAGCCGCATACCTTGGATTGGCCGTACCGGCGATCGCACAGGA
CACCGTGAAGATCGGCGTCACGCAACCCCTCACCGGCGCGTTCGCAGCGT
CCGGCAACTACGTGCTGCAGGGCGCCAAGATCGCCGAGGCCGAGATCAAC
AAGGCCGGCGGTGTTCTGGGCAAAAAAATCCAGCTCGTCGTCGAGGACAA
CAAGTCCAATCCGACCGAGGCCGTCGCTACCGCGGAAAAACTCATCACGA
AGGACAAGGTTCCCGTGATGCTGGGTGCGTGGAGTTCCACCCTGACGCTC
GCGGTGATGCCCAAGCTTGAGGAATACGGCGTTCCGATGCTGGTGGAGAC
GTCATCCTCCGGCAAGATCACGACCTCCGGCAACCCCTGGATCTTCCGGA
TCAGCCCGACGTCGGAGATGGAGGCGAAGGCGTTCGAGCCGCTCGTCAAG
AAGCTCGGGATCAAGAAGGCCGACTTGCTCGGCACCAACAACGATTTCGG
CCTGGGAGCGATGCAGGAGTTCAGCAAGATGCTGAAGGCCAGCGGCGTCG
CGATCGGCGCCAGCGAGACGATGGACCCGAAGGCCGTCGACTTCTCCGCC
CAGCTCGCCAAGATCAAGGCGTCGGGCGGCGATACGCTGTTCGTGACGAC
CGCCGTCGAGCAGATCACCCTGATCCTGCGGCAAGCCAAGGAGCAGCAGG
TCAAGGCCCGCATCATCACGACCGGCGGCTCCAACTCGCCCGACCAGTTG
ATCCAGCAGGCGGGCGATGCCGCCAACGGGTCGTCTCATCTGGTGTTCTT
CACACCCTGGTTCCCCGATGCCGTGAAGAACCCGGACCTGGCGACGCGCT
TCGTCAAAGAGTGGAACGCGCGCGGCCACAACGTCGGCGGGCTCACCGAA
GGTTTCCGCGGCTGGGATGGCATCACCACGATCGTCGCGGCGATCAAGGC
CGCCGGCAAGGCCGATCCCAAGGCGATCCAGGCTGCCCTGTGGAAGGTCA
AGGTGAAG
back to top