mRNA_P-wetherbeei_contig21559.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21559.1.1 vs. uniprot
Match: A0A6H5KF38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF38_9PHAE) HSP 1 Score: 167 bits (423), Expect = 8.470e-43 Identity = 131/349 (37.54%), Postives = 161/349 (46.13%), Query Frame = 1
Query: 1 FASATVPQHRHFLKQCVRNQWTLAEPQHVRVQASEAMPASLGHFYVVCPADKKMAVLRMLLRRELAGATPLSLPLLLEDGATSEEEQRTADVTVMETRXXXXXXXXXXXXXXXXXXPXATTGEGPAIXXXXXXXXXGLETGSAAGMLGAEAVPLRRQALVFALPTRPLEAMAAAIDRELRRATGAAGAVGAGLLGSGTGDDVGVAADVPPPMATLAAQQHDLRXXXXXXXXXXXXXXXXXADRYSGIGGGYSVDTAAAAAGAAPLAEVLREELGLTGRADALGAFRSGETAVLVATDLAARGLDVPDVSCVVNFDLPADWAAYVHRGGRAGXXXXAGAVVSIVAPGEEF 1047
FASATVPQH HF++QCV+ QWTL EP HV+V A EAMP L H YVVCP ++K+AVLR L++REL G + L GA A T GEG + E + G + V + LVFAL T+PLE +AA++D+ L G G XXXXXXX PLAE LREELGL RADA+ FR G+T +LV+TD+AARGLDVP+++ V N DLP D YVHRGGRAG G V+S+V P +EF
Sbjct: 401 FASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHHYVVCPPEQKLAVLRALVKREL-GVSASEAAAKLTSGAPPXXXXLGATAVA------------------------TTAGEGDSPS----------EGQAGGGGVANTDVQADTRGLVFALATKPLEGIAASLDKAL----------------GGRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAQPPQP--------------------------PLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEF 672
BLAST of mRNA_P-wetherbeei_contig21559.1.1 vs. uniprot
Match: D8LSP0_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSP0_ECTSI) HSP 1 Score: 146 bits (369), Expect = 2.110e-36 Identity = 114/349 (32.66%), Postives = 141/349 (40.40%), Query Frame = 1
Query: 1 FASATVPQHRHFLKQCVRNQWTLAEPQHVRVQASEAMPASLGHFYVVCPADKKMAVLRMLLRRELAGATPLSLPLLLEDGATSEEEQRTADVTVMETRXXXXXXXXXXXXXXXXXXPXATTGEGPAIXXXXXXXXXGLETGSAAGMLGAEAVPLRRQALVFALPTRPLEAMAAAIDRELRRATGAAGAVGAGLLGSGTGDDVGVAADVPPPMATLAAQQHDLRXXXXXXXXXXXXXXXXXADRYSGIGGGYSVDTAAAAAGAAPLAEVLREELGLTGRADALGAFRSGETAVLVATDLAARGLDVPDVSCVVNFDLPADWAAYVHRGGRAGXXXXAGAVVSIVAPGEEF 1047
FASATVPQH HF++QCV+ QWTL EP HV+V A EAMP L H+YVVCP +KK+AVLR +TR LVFAL T+PLE +AA++D+ L G GSG A+ D + PLAE LR+ELGL RADA+ FR G+T +LV+TD+AARGLDVP+++ V N DLP D YVHRGGRAG G V+S+V P +EF
Sbjct: 233 FASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPEKKLAVLRT------------------------------------DTRG-----------------------------------------------------------LVFALATKPLEGIAASLDKAL------------GGRGSGXXXXXXXXXXXXXXXXXXXAKGWDEQPPQP------------------------------------PLAEFLRQELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEF 438
BLAST of mRNA_P-wetherbeei_contig21559.1.1 vs. uniprot
Match: A0A835Z5K4_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5K4_9STRA) HSP 1 Score: 145 bits (366), Expect = 1.490e-35 Identity = 128/351 (36.47%), Postives = 150/351 (42.74%), Query Frame = 1
Query: 1 FASATVPQHRHFLKQCVRNQWTLAEPQHVRVQASEAMPASLGHFYVVCPADKKMAVLRMLLRRELAGATPLSLPLLLEDGATSEEEQRTADVTVMETRXXXXXXXXXXXXXXXXXXPXATTGEGPAIXXXXXXXXXGLETGSAAGMLGAEAVPLRRQALVFALPTRPLEAMAAAIDRELRRATGAAGAVGAGLLGSGTGDDVGVAADVPPPMATLAAQQHDLRXXXXXXXXXXXXXXXXXADRYSGIGGGYSVDTAAAAAGAAPLAEVLREELGLTGRADALGAFRSGETAVLVATDLAARGLDVPDVSCVVNFDLPADWAAYVHRGGRAGXXXXAGAVVSIVAPGEEFAM 1053
FASATVPQH HF++QCV QWTLAEP HV+V EAMP L H YV C KK+A LR L+RREL G G +ALVFA RPL+ MAAA+D +LR+A G G D XXXXXXXX APLA+VLRE+LGL RADA+ +R+G VL+ TDLAARGLDVP+ + V +FDLPAD Y+HRGGRA XXXX VVSIV P +EF +
Sbjct: 280 FASATVPQHNHFMRQCVAQQWTLAEPVHVQVHPKEAMPPGLTHHYVTCAPAKKLAALRALVRRELGGD-------------------------------------------------------------------------------GXXXXXXAPRALVFAQANRPLDQMAAALDADLRKARG--------------GGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------APLADVLREDLGLARRADAVARYRAGAARVLLTTDLAARGLDVPETTHVFHFDLPADAEGYIHRGGRAXXXXXXXXVVSIVTPEQEFVL 506
BLAST of mRNA_P-wetherbeei_contig21559.1.1 vs. uniprot
Match: A0A7S4MVY5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MVY5_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.350e-19 Identity = 97/355 (27.32%), Postives = 136/355 (38.31%), Query Frame = 1
Query: 1 FASATVPQHRHFLKQCVRNQWTLAEPQHVRVQASEAMPASLGHFYVVCPADKKMAV-LRMLLRRELAGATPLSLPLLLEDGATSEEEQRTADVTVMETRXXXXXXXXXXXXXXXXXXPXATTGEGPAIXXXXXXXXXGLETGSAAGMLGAEAVPLRRQALVFALPTRPLEAMAAAIDRELRRATGAAGAVGAGLLGSGTGDDV---GVAADVPPPMATLAAQQHDLRXXXXXXXXXXXXXXXXXADRYSGIGGGYSVDTAAAAAGAAPLAEVLREELGLTGRADALGAFRSGETAVLVATDLAARGLDVPDVSCVVNFDLPADWAAYVHRGGRAGXXXXAGAVVSIVAPGEEFAM 1053
F+SAT+PQH HF++QCV+NQWT+ EP HV E +P +L H YVVC ++ + LR +++RE+ G L R+ALVF P RPLE MAAAI +L + DD+ GV V +L+A+ + + + G G+ D + L +E G G ++++TDLAARGLDV DVS V+N+DLP D YVHRGGRAG G V+S++ +EF +
Sbjct: 329 FSSATIPQHNHFMRQCVQNQWTVREPTHVCASPGELVPPTLSHSYVVCDGNENKPIGLRRIIKREVR-----------------------------------------------------------------------------RGRL--------RKALVFCEPQRPLENMAAAIAADLNGT----------VWTESRNDDIEYAGVIVSVLRYEESLSARSAAMAAFRGPNSRLKVRDNIMASSK-QGQDSGFIEDI-----------DALNQE----------GVESHGGVRIMLSTDLAARGLDVTDVSHVINYDLPNDGDTYVHRGGRAGRLGRKGTVLSLITGEQEFVL 566
BLAST of mRNA_P-wetherbeei_contig21559.1.1 vs. uniprot
Match: B7FRY7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FRY7_PHATC) HSP 1 Score: 90.5 bits (223), Expect = 3.210e-16 Identity = 95/354 (26.84%), Postives = 136/354 (38.42%), Query Frame = 1
Query: 1 FASATVPQHRHFLKQCVRNQWTLAEPQHVRVQASEAM-PASLGHFYVVCPA-DKKMAVLRMLLRRELAGATPLSLPLLLEDGATSEEEQRTADVTVMETRXXXXXXXXXXXXXXXXXXPXATTGEGPAIXXXXXXXXXGLETGSAAGMLGAEAVPLRRQALVFALPTRPLEAMAAAIDRELRRATGAAGAVGAGLLGSGTGDDVGVAADVPPPMATLAAQQHDLRXXXXXXXXXXXXXXXXXA-DRYSGIGGGYSVDTAAAAAGAAPLAEVLREELGLTGRADALGAFRSGETAVLVATDLAARGLDVPDVSCVVNFDLPADWAAYVHRGGRAGXXXXAGAVVSIVAPGEEFAM 1053
FASAT+PQHRHFLKQC +NQWTL EP HV ++ E + PA+L H Y VC + D+K+A LR L+ + A + + ++ LVF+ RPLE MA + ++ G L G G + Q+ D+R A D + G GY++ + A+ + +D + R VL +TDLAARGLD+ D+S V++FDLP D YVHR GR G +G V+ I++P +EF +
Sbjct: 369 FASATIPQHRHFLKQCAQNQWTLREPTHVCLRPGEQLLPATLEHSYAVCRSTDQKLATLRRLVTKIYAKSV----------------------------------------------------------------------------------IEPPKKVLVFSDARRPLEEMAQILANDIE---------GGMLWKDGYGKE----------------QERDVRAVVAVLRYEDSLSQRAAAIDSFRG--DGYTMASGAS-----------QTYTSRDNDSDTAPSLR-----VLFSTDLAARGLDIADISHVIHFDLPPDADTYVHRAGRTGRFGRSGQVLCIISPDQEFVL 597
BLAST of mRNA_P-wetherbeei_contig21559.1.1 vs. uniprot
Match: A0A7S2SG42_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SG42_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 7.560e-16 Identity = 43/86 (50.00%), Postives = 57/86 (66.28%), Query Frame = 1
Query: 796 AEVLREELGLTGRADALGAFRSGETAVLVATDLAARGLDVPDVSCVVNFDLPADWAAYVHRGGRAGXXXXAGAVVSIVAPGEEFAM 1053
A VLREE G++ RA L FR GE ++L++TDLAARGLD+P++S VV FD+P+ Y+HR GR G VV+I EEF +
Sbjct: 19 AAVLREEDGISKRARVLDGFRQGEFSILLSTDLAARGLDIPEISHVVQFDMPSSADLYLHRAGRTARMGRPGTVVTIALTSEEFVL 104
BLAST of mRNA_P-wetherbeei_contig21559.1.1 vs. uniprot
Match: A0A7S4PHD8_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PHD8_GUITH) HSP 1 Score: 81.3 bits (199), Expect = 8.900e-15 Identity = 40/85 (47.06%), Postives = 57/85 (67.06%), Query Frame = 1
Query: 802 VLREELGLTGRADALGAFRS-GETAVLVATDLAARGLDVPDVSCVVNFDLPADWAAYVHRGGRAGXXXXAGAVVSIVAPGEEFAM 1053
VL E +G T R + FRS G +L+A+D+A+RGLD+PD++ V+NFDLP DW Y HR GRAG G+V++++A E F +
Sbjct: 44 VLEEAIGSTARTRVMSKFRSLGGNRILLASDVASRGLDIPDINMVINFDLPPDWELYCHRAGRAGRLGREGSVMTLLAEDELFVL 128
BLAST of mRNA_P-wetherbeei_contig21559.1.1 vs. uniprot
Match: A0A351G7F2_9CHLR (RNA helicase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A351G7F2_9CHLR) HSP 1 Score: 82.0 bits (201), Expect = 3.060e-14 Identity = 41/68 (60.29%), Postives = 48/68 (70.59%), Query Frame = 1
Query: 844 LGAFRSGETAVLVATDLAARGLDVPDVSCVVNFDLPADWAAYVHRGGRAGXXXXAGAVVSIVAPGEEF 1047
L FR G+T VLVATD+AARGLD+ D+S V NFDLP D +YVHR GR G G +S+VAP EEF
Sbjct: 3 LNRFRQGQTKVLVATDVAARGLDIEDISHVFNFDLPNDLESYVHRIGRTGRAGKTGTAISLVAPSEEF 70
BLAST of mRNA_P-wetherbeei_contig21559.1.1 vs. uniprot
Match: A0A7S3VGM2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VGM2_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 4.300e-14 Identity = 87/352 (24.72%), Postives = 132/352 (37.50%), Query Frame = 1
Query: 1 FASATVPQHRHFLKQCVRNQWTLAEPQHVRVQASEAMPASLGHFYVVCPA-DKKMAVLRMLLRRELAGATPLSLPLLLEDGATSEEEQRTADVTVMETRXXXXXXXXXXXXXXXXXXPXATTGEGPAIXXXXXXXXXGLETGSAAGMLGAEAVPLRRQALVFALPTRPLEAMAAAIDRELRRATGAAGAVGAGLLGSGTGDDVGVAADVPPPMATLAAQQHDLRXXXXXXXXXXXXXXXXXADRYSGIGGGYSVDTAAAAAGAAPLAEVLREELGLTGRADALGAFRSGETAVLVATDLAARGLDVPDVSCVVNFDLPADWAAYVHRGGRAGXXXXAGAVVSIVAPGEEFAM 1053
F SAT+PQH HFLK CV+NQW + EP +V E +P +L H YVVC ++KM L ++ +++ + ++ D T + LVF P R LE MA + R+L ++ + V A +L P + A + R AD Y +GG + +E+ D + G+ +L++TD+AARGLD+ D++ V+NFDLP + YVHRGGRAG G V+S++ +EF +
Sbjct: 292 FVSATIPQHNHFLKSCVQNQWMVREPVYVCASPGELIPPTLKHCYVVCKGMEQKMGGLIRMIHKQIM-----------------KRKKSKLDTTC--------------------------------------------------------------RVLVFCEPKRHLEEMAEILKRDLSKSLDSVYDVSASVL------------RYEDPTSVRMAAMEEFRG----------------ADTY--LGGR------------------IMDEVSEGDEKDTSQGVK-GDLRILLSTDIAARGLDISDITHVINFDLPHEGDIYVHRGGRAGRLGRKGLVMSLITHEQEFVL 515
BLAST of mRNA_P-wetherbeei_contig21559.1.1 vs. uniprot
Match: X1B362_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X1B362_9ZZZZ) HSP 1 Score: 81.3 bits (199), Expect = 6.920e-14 Identity = 44/83 (53.01%), Postives = 53/83 (63.86%), Query Frame = 1
Query: 796 AEVLREELGLTGRADALGAFRSGETAVLVATDLAARGLDVPDVSCVVNFDLPADWAAYVHRGGRAGXXXXAGAVVSIVAPGEE 1044
AE L +L R L FR+G+ VLVATD+AARGLD+ D+S V NFDLP D AYVHR GR G G +S+V PGE+
Sbjct: 120 AEALNGDLAQDARIRVLNRFRAGQIKVLVATDVAARGLDIDDISHVFNFDLPPDPEAYVHRIGRTGRAGKEGIAISLVTPGEK 202 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21559.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21559.1.1 >prot_P-wetherbeei_contig21559.1.1 ID=prot_P-wetherbeei_contig21559.1.1|Name=mRNA_P-wetherbeei_contig21559.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=351bp FASATVPQHRHFLKQCVRNQWTLAEPQHVRVQASEAMPASLGHFYVVCPAback to top mRNA from alignment at P-wetherbeei_contig21559:106..1160- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21559.1.1 ID=mRNA_P-wetherbeei_contig21559.1.1|Name=mRNA_P-wetherbeei_contig21559.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1055bp|location=Sequence derived from alignment at P-wetherbeei_contig21559:106..1160- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21559:106..1160- >mRNA_P-wetherbeei_contig21559.1.1 ID=mRNA_P-wetherbeei_contig21559.1.1|Name=mRNA_P-wetherbeei_contig21559.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1053bp|location=Sequence derived from alignment at P-wetherbeei_contig21559:106..1160- (Phaeothamnion wetherbeei SAG_119_79)back to top |