mRNA_P-wetherbeei_contig21522.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig21522.1.1
Unique NamemRNA_P-wetherbeei_contig21522.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig21522.1.1 vs. uniprot
Match: A0A3D5DDF5_9GAMM (Protein HflK n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DDF5_9GAMM)

HSP 1 Score: 431 bits (1109), Expect = 6.680e-148
Identity = 233/353 (66.01%), Postives = 286/353 (81.02%), Query Frame = 1
Query:    1 MAWNDPDGNERDPWGGRRKDQGPPDLDEVVRKMQEKLSGLFGGKQRPPS-----AHDNAFIWGVIGIVAVCLLAWEMVYRIDPAERGVVLRFGKYVSVLQPGPHIRFPRPIEEVRKINVERIETLTADSSMLTGDENIVDVEVAVQYRIKDAEAYLFRIADPEVSVQRVTESAIRDVIGQRTLDFVITEGRAEIATQAQTLIQQTLDNYESGVIITSVNMQPAKPPEEVKASFDDAIKAREDKERKVNEGEAYRNEVVERAAGEGARIRLDAXXXXXXXXXXXXXXTKRFSQVLTEYDKAPAVTRNRLYLEAMEEVLSSSSKVLMDTKNGNNVTYLPLDRMMGNGRAGTNPET 1044
            MAW+DPD  ERDPWGGR+K+ GPPDLDEVVRKMQ+KL GLFGG  RP +     A  +  +W  I ++ + LL +   +RI+PAERGVV+RFGKYV+ LQPGP+ +FPRPI+EV KINV++I   T +++MLTGDENIVDVE+AVQYRIKD + YLF+IADP+ +VQRVTESAIRD+IGQ TLDFVITEGRAEI T A  LIQQ LDNY+SG+ +TSVNMQPAKPPEEVKASFDDAIKARED++R++NE EAYRNE+ E+A GE A      XXXXXXXXXXXXXX +RF Q+L EY+KAP VTR RLYL+A+EEVLS + KV++D  NGN++ YLP+D++M  G +G  P+T
Sbjct:    1 MAWDDPDEKERDPWGGRKKNDGPPDLDEVVRKMQDKLGGLFGGGGRPSNPGTGGAGLSPLMWLAIILLLIALLVYATFWRIEPAERGVVMRFGKYVNTLQPGPNFQFPRPIDEVIKINVQQIRPFTVNATMLTGDENIVDVEMAVQYRIKDVKNYLFKIADPDTTVQRVTESAIRDIIGQSTLDFVITEGRAEIGTGAIALIQQILDNYQSGIEVTSVNMQPAKPPEEVKASFDDAIKAREDEQRRINEAEAYRNEIDEKAQGEAAXXXXXXXXXXXXXXXXXXXXXRRFEQLLIEYEKAPEVTRKRLYLDAIEEVLSDNPKVMLDNDNGNSLMYLPIDKLMERG-SGRRPDT 352          
BLAST of mRNA_P-wetherbeei_contig21522.1.1 vs. uniprot
Match: A0A1Z8WQY9_9GAMM (Protein HflK n=1 Tax=Methylococcaceae bacterium TMED69 TaxID=1986766 RepID=A0A1Z8WQY9_9GAMM)

HSP 1 Score: 426 bits (1094), Expect = 1.030e-145
Identity = 233/345 (67.54%), Postives = 282/345 (81.74%), Query Frame = 1
Query:    1 MAWNDPDGNERDPWGGRRKDQGPPDLDEVVRKMQEKLSGLFGGKQRPPSAHDNAF--IWGVIGIVAVCLLAWEMVYRIDPAERGVVLRFGKYVSVLQPGPHIRFPRPIEEVRKINVERIETLTADSSMLTGDENIVDVEVAVQYRIKDAEAYLFRIADPEVSVQRVTESAIRDVIGQRTLDFVITEGRAEIATQAQTLIQQTLDNYESGVIITSVNMQPAKPPEEVKASFDDAIKAREDKERKVNEGEAYRNEVVERAAGEGARIRLDAXXXXXXXXXXXXXXTKRFSQVLTEYDKAPAVTRNRLYLEAMEEVLSSSSKVLMDTKNGNNVTYLPLDRMMGNGRAG 1029
            M+WN PD  E+DPWG R  +QGPPDLDEVV+KMQE    +FGG      + D     I  + GI+ V LL +EMVYRIDPAERGVV+RFGKYV+ LQPGPH+R PRP+EEV K+NVERI+T+T+ SSMLTGDENIV+VE+AVQYRIK+A  YLF+IADP+VSV+RVTESAIRD+IGQ TL +VITEGRA+IAT A  LIQ  LD YESGV +TSVNMQPAKPPE VKA+FDDAIKARED++RK+NE EAYRNEVVE+AAGE ARIRL  XXXXXXXXXXXXXX  RF Q+  EY KAP VTR RLY+EA+E VLS ++KV++D ++G+++ YLP+D+++  G +G
Sbjct:    1 MSWN-PDNKEKDPWGNRPGNQGPPDLDEVVKKMQEGFGKIFGGGSGSKKSGDEPKGPILLIAGILFVLLLGYEMVYRIDPAERGVVMRFGKYVTSLQPGPHVRLPRPVEEVIKVNVERIQTITSQSSMLTGDENIVEVELAVQYRIKEATDYLFKIADPDVSVRRVTESAIRDIIGQSTLTYVITEGRAQIATDAMALIQDILDVYESGVEVTSVNMQPAKPPEAVKAAFDDAIKAREDEQRKINEAEAYRNEVVEKAAGEAARIRLXXXXXXXXXXXXXXXXXXRFDQLYKEYSKAPEVTRKRLYIEAIESVLSKTNKVILDNESGSSLMYLPIDKLVERGGSG 344          
BLAST of mRNA_P-wetherbeei_contig21522.1.1 vs. uniprot
Match: A0A2E2BDA4_9GAMM (Protein HflK n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A2E2BDA4_9GAMM)

HSP 1 Score: 422 bits (1085), Expect = 2.230e-144
Identity = 236/349 (67.62%), Postives = 280/349 (80.23%), Query Frame = 1
Query:    1 MAWNDPDGNERDPWGGRRKDQGPPDLDEVVRKMQEKLSGLFGGK------QRPPSAHDNAFIWGVIGIVAVCLLAWEMVYRIDPAERGVVLRFGKYVSVLQPGPHIRFPRPIEEVRKINVERIETLTADSSMLTGDENIVDVEVAVQYRIKDAEAYLFRIADPEVSVQRVTESAIRDVIGQRTLDFVITEGRAEIATQAQTLIQQTLDNYESGVIITSVNMQPAKPPEEVKASFDDAIKAREDKERKVNEGEAYRNEVVERAAGEGARIRLDAXXXXXXXXXXXXXXTKRFSQVLTEYDKAPAVTRNRLYLEAMEEVLSSSSKVLMDTKNGNNVTYLPLDRMMGNGRAG 1029
            M+WND +G+   PW  +  +QGPP LDEVVR+MQ+KL   FGGK      +  P      F+  +IGI+ + L +WEM+YRIDPAERGVV+RFGK+VSVLQPGPHIR PRPIE+V K+NVERI+TLT+DS+MLTG ENIVDVEVA Q RIKD   YLF IADP+VSV+RVTESA RD+IG  TL FVITEGRAEIAT AQTLIQ  LD Y SGV +TSVNMQPAKPPE+VKASFDDAIKARED++RK+NE EAYRNEVVER+AGE ARIRLD XXXXXXXXXXXXXX   FSQ+  EY+KAP VTRNRLYLEAME+V+S +SK+++D    +++ YLPLD+++   R G
Sbjct:    1 MSWNDSNGDNX-PWKNKGGNQGPPXLDEVVRRMQQKLXSFFGGKGTSDTXKXGPXGKGGPFV--LIGILLLGLXSWEMLYRIDPAERGVVMRFGKFVSVLQPGPHIRXPRPIEQVVKVNVERIQTLTSDSAMLTGXENIVDVEVAXQXRIKDVXKYLFAIADPDVSVRRVTESAXRDIIGGXTLSFVITEGRAEIATGAQTLIQDILDTYSSGVEVTSVNMQPAKPPEQVKASFDDAIKAREDEQRKINEAEAYRNEVVERSAGEAARIRLDXXXXXXXXXXXXXXXXXXFSQLYKEYEKAPDVTRNRLYLEAMEQVMSDASKIVIDNDGSSSLMYLPLDKLLEKSRDG 346          
BLAST of mRNA_P-wetherbeei_contig21522.1.1 vs. uniprot
Match: A0A523P259_9PROT (Protein HflK n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P259_9PROT)

HSP 1 Score: 420 bits (1080), Expect = 1.690e-143
Identity = 228/370 (61.62%), Postives = 288/370 (77.84%), Query Frame = 1
Query:    1 MAWNDPDGNERDPWGGRRKDQGPPDLDEVVRKMQEKLSGLFGGKQRPPSAHDNA------FIWGVIGIVAVCLLAWEMVYRIDPAERGVVLRFGKYVSVLQPGPHIRFPRPIEEVRKINVERIETLTADSSMLTGDENIVDVEVAVQYRIKDAEAYLFRIADPEVSVQRVTESAIRDVIGQRTLDFVITEGRAEIATQAQTLIQQTLDNYESGVIITSVNMQPAKPPEEVKASFDDAIKAREDKERKVNEGEAYRNEVVERAAGEGARIRLDAXXXXXXXXXXXXXXTKRFSQVLTEYDKAPAVTRNRLYLEAMEEVLSSSSKVLMDTKNGNNVTYLPLDRMMGNGRAGTNPE-------TTEAAPEPQP 1071
            MAWNDPDGN RDPWG R+ D+GPPDLDEVVRKMQ+KL GLFGG +  P+A+ +        IWG+IG+  V ++     +RI+PAERGVVLRFGK++ +LQPGP+ + PRPI+EV  +NV++I   T +++MLTGDENIVDVE+AVQYRI D + YLF+IADP+ +VQRVTESAIRD+IGQ TLDFVITEGRAEI + A TLIQQ LDNY+SG+ +TSVNMQPAKPPEEVKA+FDDAIKARED++R++N+ EAYRNE+ +RAAGE ARI L  XXXXXXXXXXXXXX  RF Q+L EY+KAP VTR RLYL+ +E+V + + KV++  K GN++ YLP+D+++        P        ++EAA  P P
Sbjct:    1 MAWNDPDGNNRDPWGKRKGDEGPPDLDEVVRKMQDKLGGLFGGGR--PTANGSGGGKMSPLIWGLIGLGLVVVVVMATFWRIEPAERGVVLRFGKFIHILQPGPNFQLPRPIDEVIIVNVDQIRPFTVNATMLTGDENIVDVEMAVQYRINDVKKYLFKIADPDTTVQRVTESAIRDIIGQSTLDFVITEGRAEIGSGALTLIQQILDNYDSGIEVTSVNMQPAKPPEEVKAAFDDAIKAREDEQRRINQAEAYRNEINQRAAGEAARILLXXXXXXXXXXXXXXXXXXRFEQLLVEYEKAPVVTRQRLYLDTIEQVFARNPKVMLQNKGGNSLMYLPIDKLIERASRSQQPSGYRELDLSSEAAVAPPP 368          
BLAST of mRNA_P-wetherbeei_contig21522.1.1 vs. uniprot
Match: A0A1S9CZ95_9GAMM (Protein HflK n=1 Tax=Chromatiales bacterium USCg_Taylor TaxID=1934255 RepID=A0A1S9CZ95_9GAMM)

HSP 1 Score: 353 bits (907), Expect = 2.720e-117
Identity = 197/366 (53.83%), Postives = 258/366 (70.49%), Query Frame = 1
Query:    1 MAWNDPDGN-ERDPWGGRRKDQGPPDLDEVVRKMQEKLSGLFGGKQRPPSAHDNAFI----WGVIGIVAVCLLAWEMVYRIDPAERGVVLRFGKYVSVLQPGPHIRFPRPIEEVRKINVERIETLTADSSMLTGDENIVDVEVAVQYRIKDAEAYLFRIADPEVSVQRVTESAIRDVIGQRTLDFVITEGRAEIATQAQTLIQQTLDNYESGVIITSVNMQPAKPPEEVKASFDDAIKAREDKERKVNEGEAYRNEVVERAAGEGARIRLDAXXXXXXXXXXXXXXTKRFSQVLTEYDKAPAVTRNRLYLEAMEEVLSSSSKVLMDTKNGNNVTYLPLDRMMGNGRAGTNPET----TEAAPEPQP 1071
            MAWN+P G  +RDPWG RR++ GPPDLDEV+RK+Q KL GLFGG                 W  I ++ V ++AW M+Y +   E+G+V RFG YV+ L PG ++R+PRPIE V  +NVE+  ++   +S+LT DENI+DVE  V YR+KD E Y F +  P+ +V++ TES IR VIG+  +DFV+T GR EIA Q Q  IQ+ LD Y++G+I+TSVNMQ AKPPEEVK++FDDAIKARED++R++NE E YRN+++ +A G         XXXXXXXXXXXXXX  RF Q+L EY+KAP +TR RLYLEAME VLS++ KVLMDT+ GNN+ YLPLD++  + RA  NP      + A PEP+P
Sbjct:    1 MAWNEPGGGKDRDPWGNRRREGGPPDLDEVIRKLQAKLKGLFGGGXXXXXXXXXXXXGRGTWAGITLILVIVMAWNMMYVVQAQEQGIVFRFGAYVASLAPGLNVRWPRPIERVELVNVEQTRSIAHHASILTKDENIIDVEFTVFYRVKDVEDYSFNVIGPDRTVEQATESTIRAVIGKNDMDFVLTAGRGEIANQIQVGIQKLLDTYQAGMIVTSVNMQAAKPPEEVKSAFDDAIKAREDEQRQINEAETYRNDIIPKARGXXXXXXXXXXXXXXXXXXXXXXXXXRFVQLLVEYEKAPQITRERLYLEAMESVLSNAPKVLMDTEGGNNLVYLPLDKLFEH-RANVNPPAVVTESNALPEPEP 365          
BLAST of mRNA_P-wetherbeei_contig21522.1.1 vs. uniprot
Match: G2E5K2_9GAMM (Protein HflK n=1 Tax=Thiorhodococcus drewsii AZ1 TaxID=765913 RepID=G2E5K2_9GAMM)

HSP 1 Score: 345 bits (886), Expect = 4.510e-114
Identity = 205/373 (54.96%), Postives = 258/373 (69.17%), Query Frame = 1
Query:    1 MAWNDPDGNERDPWGGRRK-DQGPPDLDEVVRKMQEKLSGLFGGKQRP---PSAHDNAFIWGVIGIVA-VCLLAW--EMVYRIDPAERGVVLRFGKYVSVLQPGPHIRFPRPIEEVRKINVERIETLTADSSMLTGDENIVDVEVAVQYRIKDAEAYLFRIADPEVSVQRVTESAIRDVIGQRTLDFVITEGRAEIATQAQTLIQQTLDNYESGVIITSVNMQPAKPPEEVKASFDDAIKAREDKERKVNEGEAYRNEVVERAAGEGARIRLDAXXXXXXXXXXXXXXTKRFSQVLTEYDKAPAVTRNRLYLEAMEEVLSSSSKVLMDTKNG-NNVTYLPLDRMMG--------NGRAGTNPETTEAAPEPQP 1071
            MAWN+P G  +DPW GR   DQGPPDLDEVVRK+QE+L GLFGG +     PS     F    IG+V  + LL W    +Y ++PAERGVV+RFGKYV    PGPH   P P+E V K+NV+ I T+T  ++MLT DENIV+VE+ VQ RI+DA  YLF+  DPE ++   T + +R  IGQ  LD+V+TEGR+ +A   +  IQ+ LD Y++G+I+TSVNMQPAKPPE+VKA+FDDAIKAREDKER  N+ EAY NEV+  A G+ ARI  D XXXXXXXXXXXXXX   F  +LTEY KAPAVTR RLYLE ME+V+SS+ KVL+D ++G N++ YLP+D++M         +G     P T    PE  P
Sbjct:    1 MAWNEPGGGNKDPWSGRPGGDQGPPDLDEVVRKLQERLGGLFGGGKPSGDGPSNGGGQFSSKAIGVVLLILLLVWLASGIYIVEPAERGVVMRFGKYVDTTGPGPHWHMPLPLETVIKVNVDEISTITHRAAMLTQDENIVEVELTVQSRIQDAADYLFQDQDPERTLNDATVTVVRVTIGQSKLDYVMTEGRSAVAVTIKQRIQKLLDRYKTGLIVTSVNMQPAKPPEQVKAAFDDAIKAREDKERLENQAEAYSNEVLPHARGKAARILADXXXXXXXXXXXXXXXXXXFEAILTEYAKAPAVTRERLYLETMEQVMSSNGKVLLDVQDGGNSLIYLPIDQLMKQQPQTKTQSGNGNQEPSTAATVPEKTP 373          
BLAST of mRNA_P-wetherbeei_contig21522.1.1 vs. uniprot
Match: A0A521REF3_9GAMM (Protein HflK n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521REF3_9GAMM)

HSP 1 Score: 345 bits (884), Expect = 7.950e-114
Identity = 192/355 (54.08%), Postives = 251/355 (70.70%), Query Frame = 1
Query:    1 MAWNDPDGN--ERDPWGGRRKDQGPPDLDEVVRKMQEKLSGLFGGKQRPPSAHDNA--FIWGVIGIVAVCLLAWEMVYRIDPAERGVVLRFGKYVSVLQPGPHIRFPRPIEEVRKINVERIETLTADSSMLTGDENIVDVEVAVQYRIKDAEAYLFRIADPEVSVQRVTESAIRDVIGQRTLDFVITEGRAEIATQAQTLIQQTLDNYESGVIITSVNMQPAKPPEEVKASFDDAIKAREDKERKVNEGEAYRNEVVERAAGEGARIRLDAXXXXXXXXXXXXXXTKRFSQVLTEYDKAPAVTRNRLYLEAMEEVLSSSSKVLMDTKNGNNVTYLPLDRMMGNGRAGTNPETTEA 1053
            M WN+P G   +RDPWGGR K+ GPPDLDEVVRKMQ+ L  LFG K     A       IW +  +V +     +MVY +D  ERGVVLRFG+Y    QPG +IR PRPIE V  +NVE+I +L+  ++MLT DENIVDVEVAVQ++IKD   YLF +  P+ ++  + ESA+R+VIG+  LDFV+TEGR+ IA     LIQ+T+D+Y  G+++++V MQPAKPPE+VK +FDDAIKARED++R VNE EAY N+++ RA G  A      XXXXXXXXXXXXXX   F Q+L EY KAP +TR R+YL+ ME VLS+++KVL+D    N++ YLPLDR++   R G+ P+T E+
Sbjct:    1 MGWNEPPGGNRDRDPWGGRNKNDGPPDLDEVVRKMQQGLGRLFGRKTASTDAGPPIPIAIWLLFIVVLLIFCVIDMVYFVDTQERGVVLRFGRYDRTWQPGLNIRLPRPIETVELVNVEKIRSLSHKNNMLTQDENIVDVEVAVQWKIKDPAQYLFSVRQPDETLNNIVESAVREVIGKSKLDFVLTEGRSRIAQSQMELIQETVDDYAMGILVSTVEMQPAKPPEQVKDAFDDAIKAREDEQRLVNESEAYVNDIIPRARGGAAXXXXXXXXXXXXXXXXXXXXXXXFDQLLAEYSKAPEITRKRMYLDTMESVLSNTNKVLLDADGNNSLMYLPLDRLLDQSRTGSQPQTQES 355          
BLAST of mRNA_P-wetherbeei_contig21522.1.1 vs. uniprot
Match: W9VAL8_9GAMM (Protein HflK n=1 Tax=Imhoffiella purpurea TaxID=1249627 RepID=W9VAL8_9GAMM)

HSP 1 Score: 341 bits (875), Expect = 2.010e-112
Identity = 201/362 (55.52%), Postives = 247/362 (68.23%), Query Frame = 1
Query:    1 MAWNDPDGNERDPWGGRR-KDQGPPDLDEVVRKMQEKLSGLFGGKQRP----PSAHDNAFIWGVIGIVAVCL-LAW--EMVYRIDPAERGVVLRFGKYVSVLQPGPHIRFPRPIEEVRKINVERIETLTADSSMLTGDENIVDVEVAVQYRIKDAEAYLFRIADPEVSVQRVTESAIRDVIGQRTLDFVITEGRAEIATQAQTLIQQTLDNYESGVIITSVNMQPAKPPEEVKASFDDAIKAREDKERKVNEGEAYRNEVVERAAGEGARIRLDAXXXXXXXXXXXXXXTKRFSQVLTEYDKAPAVTRNRLYLEAMEEVLSSSSKVLMDTKNG-NNVTYLPLDRMMGNGRAGTNPETTEAAP 1059
            MAWN+P G  +DPW GR   DQGPPDLDEVVRK+QE+L GLFGG  RP    PS     F    IG+V V L L W    +Y ++PAERGVV+RFGKY     PGPH   P P+E V K+NV+ I T+T  ++MLT DENIV+VE+ VQ RI+DA  YLF+  DPE ++   T + +R  IGQ  LDFV+TEGR  +A   +  IQ+ LD Y++G+I+TSVNMQPAKPPE+VKA+FDDAIKAREDKER  N+ EAY NEV+  A G  AR     XXXXXXXXXXXXXX   F  +L EY KAP VTR RLY+E ME+VL  + KVL+D + G N++ YLP+D++M      T PET    P
Sbjct:    1 MAWNEPGGGNKDPWSGRPGDDQGPPDLDEVVRKLQERLGGLFGGGNRPSPEGPSDGGGRFSSKAIGVVLVILALVWLASGIYIVEPAERGVVMRFGKYADTTGPGPHWHLPMPLERVIKVNVDEISTITHRAAMLTQDENIVEVELTVQSRIQDAADYLFQDQDPERTLNDATVTVVRVTIGQSKLDFVMTEGRGAVAVTIKERIQKLLDRYKTGLIVTSVNMQPAKPPEQVKAAFDDAIKAREDKERLENQAEAYANEVLPSARGNAARXXXXXXXXXXXXXXXXXXXXXXFEAILNEYAKAPDVTRERLYIETMEQVLGENGKVLLDVQQGGNSLIYLPIDQLMKQQPHQTKPETDNKGP 362          
BLAST of mRNA_P-wetherbeei_contig21522.1.1 vs. uniprot
Match: A0A2E0PVS6_9GAMM (Protein HflK n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E0PVS6_9GAMM)

HSP 1 Score: 340 bits (872), Expect = 4.410e-112
Identity = 183/338 (54.14%), Postives = 256/338 (75.74%), Query Frame = 1
Query:    1 MAWNDPDGNE-RDPWGGRRKDQGPPDLDEVVRKMQEKLSGLFGGKQRPPSAHDNAFIWGVIGIVAVCLLAWEMVYRIDPAERGVVLRFGKYVSVLQPGPHIRFPRPIEEVRKINVERIETLTADSSMLTGDENIVDVEVAVQYRIKDAEAYLFRIADPEVSVQRVTESAIRDVIGQRTLDFVITEGRAEIATQAQTLIQQTLDNYESGVIITSVNMQPAKPPEEVKASFDDAIKAREDKERKVNEGEAYRNEVVERAAGEGARIRLDAXXXXXXXXXXXXXXTKRFSQVLTEYDKAPAVTRNRLYLEAMEEVLSSSSKVLMDTKNGNNVTYLPLDRMM 1011
            M WN+P  N+ +DPWG R K  GPPDLD++++KMQ+ + G+FG +      +++AF + V  I+ +  LA++  Y ID  ERGVVLRFGK+V  L+PG + RFPRPIE V+K+NV ++ ++T  + MLT DENIVDVEVAVQ+RI +A+ YLF +  P  ++++VTES++R+VIG+  LDFV+TEGR+EIA + Q+LIQ+TL  Y++G+ I++  MQPAKPPEEVKA+FDDAIKARED++R+VNE EAYRN+++ +A G         XXXXXXXXXXXXXX   F Q+L EY +AP VTR RLYL+A+E V  +++KVL+D  NGN++ YLP+D+++
Sbjct:    1 MGWNEPPENKGKDPWGNRDKGDGPPDLDDIIKKMQKGIGGIFGNRPTKIGGNNSAFPFAVGIILLLIWLAFDATYLIDQQERGVVLRFGKHVDTLEPGLNFRFPRPIEVVQKVNVGQVRSITHKALMLTQDENIVDVEVAVQWRIGNADDYLFNVFSPASTLRQVTESSVREVIGKSKLDFVLTEGRSEIAERIQSLIQETLGEYKTGIYISTAEMQPAKPPEEVKAAFDDAIKAREDEQRQVNEAEAYRNDILPKARGGAXXXXXXXXXXXXXXXXXXXXXXXXFGQLLAEYQRAPEVTRERLYLDAIESVFRNTNKVLIDNDNGNSLMYLPIDKLI 338          
BLAST of mRNA_P-wetherbeei_contig21522.1.1 vs. uniprot
Match: A0A1G0GFC1_9GAMM (Protein HflK n=1 Tax=Gammaproteobacteria bacterium RBG_16_51_14 TaxID=1798265 RepID=A0A1G0GFC1_9GAMM)

HSP 1 Score: 340 bits (871), Expect = 6.450e-112
Identity = 185/340 (54.41%), Postives = 253/340 (74.41%), Query Frame = 1
Query:    1 MAWNDPDGNE--RDPWGGRRKDQGPPDLDEVVRKMQEKLSGLFGGKQRPPSAHDNAFIWGVIGIVAVCL-LAWEMVYRIDPAERGVVLRFGKYVSVLQPGPHIRFPRPIEEVRKINVERIETLTADSSMLTGDENIVDVEVAVQYRIKDAEAYLFRIADPEVSVQRVTESAIRDVIGQRTLDFVITEGRAEIATQAQTLIQQTLDNYESGVIITSVNMQPAKPPEEVKASFDDAIKAREDKERKVNEGEAYRNEVVERAAGEGARIRLDAXXXXXXXXXXXXXXTKRFSQVLTEYDKAPAVTRNRLYLEAMEEVLSSSSKVLMDTKNGNNVTYLPLDRMM 1011
            M WN+P G    +DPWG R   +GPPDLD ++RKMQ+ L G+FG +   P    +   W V+G+V +   + +++ Y ID  ERGVVLRFG +V  L PG + RFPRP+EEV K+NV ++ ++T  ++MLT DENIVDVEVAVQ++I +AE YLF +  P  ++++VTES++R+VIG+  LDF++TEGR++IA   +TL+Q+TL+ Y+SG+++ SV MQPAKPP+EVKA+FDDAIK+RED++R VNE EAYRNEV+ RA G  A      XXXXXXXXXXXXXX   F Q+  EY  APAVTR RLYL+A+E V +++SKVLMD + GN++ YLP+DR++
Sbjct:    1 MGWNEPPGGNQGKDPWGNRGNGEGPPDLDAIIRKMQQGLGGIFGKRSGKPGNGGSPMPW-VLGLVLITSWIGYDISYVIDQQERGVVLRFGAHVETLLPGLNFRFPRPVEEVIKVNVGQVRSITHKATMLTQDENIVDVEVAVQWQIGNAEDYLFNVYSPSDTLRQVTESSVREVIGKNKLDFILTEGRSQIAESQRTLLQETLNEYKSGILVLSVEMQPAKPPDEVKAAFDDAIKSREDEQRLVNEAEAYRNEVIPRARGAAAXXXXXXXXXXXXXXXXXXXXXXXFDQLYKEYQLAPAVTRQRLYLDAIESVFANTSKVLMDNEGGNSLMYLPIDRLL 339          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21522.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DDF5_9GAMM6.680e-14866.01Protein HflK n=1 Tax=Gammaproteobacteria bacterium... [more]
A0A1Z8WQY9_9GAMM1.030e-14567.54Protein HflK n=1 Tax=Methylococcaceae bacterium TM... [more]
A0A2E2BDA4_9GAMM2.230e-14467.62Protein HflK n=1 Tax=Thiotrichales bacterium TaxID... [more]
A0A523P259_9PROT1.690e-14361.62Protein HflK n=1 Tax=Proteobacteria bacterium TaxI... [more]
A0A1S9CZ95_9GAMM2.720e-11753.83Protein HflK n=1 Tax=Chromatiales bacterium USCg_T... [more]
G2E5K2_9GAMM4.510e-11454.96Protein HflK n=1 Tax=Thiorhodococcus drewsii AZ1 T... [more]
A0A521REF3_9GAMM7.950e-11454.08Protein HflK n=1 Tax=Gammaproteobacteria bacterium... [more]
W9VAL8_9GAMM2.010e-11255.52Protein HflK n=1 Tax=Imhoffiella purpurea TaxID=12... [more]
A0A2E0PVS6_9GAMM4.410e-11254.14Protein HflK n=1 Tax=Legionellales bacterium TaxID... [more]
A0A1G0GFC1_9GAMM6.450e-11254.41Protein HflK n=1 Tax=Gammaproteobacteria bacterium... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig21522contigP-wetherbeei_contig21522:15..1085 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog765913.ThidrDRAFT_3565
PFAMsBand_7,HflK_N
Model size1071
Max annot lvl135613|Chromatiales
KEGG koko:K04088
KEGG ModuleM00742
Hectar predicted targeting categorysignal anchor
Exons1
Evalue7.4e-115
EggNOG OGsCOG0330@1|root,COG0330@2|Bacteria,1MUM2@1224|Proteobacteria,1RMUG@1236|Gammaproteobacteria,1WWWJ@135613|Chromatiales
DescriptionHflC and HflK could encode or regulate a protease
Cds size1071
COG categoryO
BRITEko00000,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186228.11056-CDS-P-wetherbeei_contig21522:14..10851683186228.11056-CDS-P-wetherbeei_contig21522:14..1085Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig21522 15..1085 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig21522.1.1prot_P-wetherbeei_contig21522.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig21522 15..1085 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig21522.1.1

>prot_P-wetherbeei_contig21522.1.1 ID=prot_P-wetherbeei_contig21522.1.1|Name=mRNA_P-wetherbeei_contig21522.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=357bp
MAWNDPDGNERDPWGGRRKDQGPPDLDEVVRKMQEKLSGLFGGKQRPPSA
HDNAFIWGVIGIVAVCLLAWEMVYRIDPAERGVVLRFGKYVSVLQPGPHI
RFPRPIEEVRKINVERIETLTADSSMLTGDENIVDVEVAVQYRIKDAEAY
LFRIADPEVSVQRVTESAIRDVIGQRTLDFVITEGRAEIATQAQTLIQQT
LDNYESGVIITSVNMQPAKPPEEVKASFDDAIKAREDKERKVNEGEAYRN
EVVERAAGEGARIRLDAEAYKERVIAQAEGETKRFSQVLTEYDKAPAVTR
NRLYLEAMEEVLSSSSKVLMDTKNGNNVTYLPLDRMMGNGRAGTNPETTE
AAPEPQP
back to top

mRNA from alignment at P-wetherbeei_contig21522:15..1085-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig21522.1.1 ID=mRNA_P-wetherbeei_contig21522.1.1|Name=mRNA_P-wetherbeei_contig21522.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1071bp|location=Sequence derived from alignment at P-wetherbeei_contig21522:15..1085- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGTGGAACGATCCGGACGGCAATGAGCGTGATCCGTGGGGTGGTCG ACGTAAGGACCAGGGCCCACCCGACCTCGATGAGGTCGTGCGCAAGATGC AGGAAAAGCTGTCCGGCCTGTTCGGCGGCAAGCAGCGCCCGCCATCGGCG CATGACAACGCGTTCATATGGGGCGTGATCGGCATCGTCGCCGTGTGCCT GCTGGCCTGGGAGATGGTCTATCGCATCGACCCGGCCGAGCGCGGCGTGG TGCTGCGCTTCGGCAAGTATGTGTCGGTGTTGCAGCCCGGCCCGCATATA CGCTTTCCGCGACCTATCGAGGAGGTGCGCAAGATCAACGTCGAGCGTAT CGAGACCCTGACCGCTGATTCCTCGATGCTGACCGGTGACGAGAACATCG TCGACGTTGAGGTGGCGGTGCAGTACCGCATCAAGGACGCCGAGGCCTAT CTGTTTCGCATCGCCGATCCGGAAGTGTCGGTGCAGCGCGTGACCGAATC CGCGATTCGCGACGTCATCGGCCAGCGCACTTTGGATTTCGTGATCACGG AAGGCCGTGCTGAAATCGCCACCCAGGCTCAGACCTTGATTCAGCAGACC CTCGATAACTATGAGTCGGGTGTCATCATCACCAGCGTCAACATGCAGCC GGCCAAGCCGCCGGAGGAAGTGAAGGCCTCGTTCGACGATGCCATCAAGG CGCGCGAAGACAAGGAACGCAAGGTCAACGAAGGTGAGGCCTATCGTAAC GAGGTGGTGGAGCGCGCGGCCGGCGAAGGCGCCCGCATTCGACTCGACGC CGAGGCCTACAAGGAGCGCGTGATCGCGCAGGCCGAAGGTGAAACCAAAC GTTTCTCGCAAGTGTTGACCGAGTATGACAAGGCGCCCGCCGTGACCCGT AATCGACTCTACCTCGAAGCCATGGAAGAAGTGCTGAGCAGCAGCAGCAA GGTGCTGATGGACACCAAGAATGGCAACAACGTCACCTATCTGCCGCTCG ACAGGATGATGGGCAACGGCCGCGCCGGCACCAACCCTGAGACCACCGAG GCCGCGCCTGAGCCGCAGCCC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig21522:15..1085-

>mRNA_P-wetherbeei_contig21522.1.1 ID=mRNA_P-wetherbeei_contig21522.1.1|Name=mRNA_P-wetherbeei_contig21522.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1071bp|location=Sequence derived from alignment at P-wetherbeei_contig21522:15..1085- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGTGGAACGATCCGGACGGCAATGAGCGTGATCCGTGGGGTGGTCG
ACGTAAGGACCAGGGCCCACCCGACCTCGATGAGGTCGTGCGCAAGATGC
AGGAAAAGCTGTCCGGCCTGTTCGGCGGCAAGCAGCGCCCGCCATCGGCG
CATGACAACGCGTTCATATGGGGCGTGATCGGCATCGTCGCCGTGTGCCT
GCTGGCCTGGGAGATGGTCTATCGCATCGACCCGGCCGAGCGCGGCGTGG
TGCTGCGCTTCGGCAAGTATGTGTCGGTGTTGCAGCCCGGCCCGCATATA
CGCTTTCCGCGACCTATCGAGGAGGTGCGCAAGATCAACGTCGAGCGTAT
CGAGACCCTGACCGCTGATTCCTCGATGCTGACCGGTGACGAGAACATCG
TCGACGTTGAGGTGGCGGTGCAGTACCGCATCAAGGACGCCGAGGCCTAT
CTGTTTCGCATCGCCGATCCGGAAGTGTCGGTGCAGCGCGTGACCGAATC
CGCGATTCGCGACGTCATCGGCCAGCGCACTTTGGATTTCGTGATCACGG
AAGGCCGTGCTGAAATCGCCACCCAGGCTCAGACCTTGATTCAGCAGACC
CTCGATAACTATGAGTCGGGTGTCATCATCACCAGCGTCAACATGCAGCC
GGCCAAGCCGCCGGAGGAAGTGAAGGCCTCGTTCGACGATGCCATCAAGG
CGCGCGAAGACAAGGAACGCAAGGTCAACGAAGGTGAGGCCTATCGTAAC
GAGGTGGTGGAGCGCGCGGCCGGCGAAGGCGCCCGCATTCGACTCGACGC
CGAGGCCTACAAGGAGCGCGTGATCGCGCAGGCCGAAGGTGAAACCAAAC
GTTTCTCGCAAGTGTTGACCGAGTATGACAAGGCGCCCGCCGTGACCCGT
AATCGACTCTACCTCGAAGCCATGGAAGAAGTGCTGAGCAGCAGCAGCAA
GGTGCTGATGGACACCAAGAATGGCAACAACGTCACCTATCTGCCGCTCG
ACAGGATGATGGGCAACGGCCGCGCCGGCACCAACCCTGAGACCACCGAG
GCCGCGCCTGAGCCGCAGCCC
back to top