mRNA_P-wetherbeei_contig2147.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig2147.4.1
Unique NamemRNA_P-wetherbeei_contig2147.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig2147.4.1 vs. uniprot
Match: A0A1F2ZVR3_9PROT (Uncharacterized protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1F2ZVR3_9PROT)

HSP 1 Score: 209 bits (531), Expect = 6.640e-68
Identity = 104/120 (86.67%), Postives = 111/120 (92.50%), Query Frame = 1
Query:    1 MKMPENTNAYLWGAAVGAIALAVVGFGWGGWVTGGTSTKTAATAAADAKVAVLAPICADRFRAQGDSAVKIAELTKASTWDRGNVVEKSGFATMPGSKTTDSDVARACAEILANPPTPKT 360
            MK+PENTNAYLWGAA+GAI LAVVGFGWGGWVTGGT+ K AA AA+DAKVA LAPICA  FRAQGDSA+KIAEL KAS+WDRGNV+EKSGFATM GSKTTDSDVARACAEILANPPTPKT
Sbjct:    1 MKLPENTNAYLWGAALGAIVLAVVGFGWGGWVTGGTAMKNAAVAASDAKVAALAPICAAGFRAQGDSAIKIAELAKASSWDRGNVIEKSGFATMLGSKTTDSDVARACAEILANPPTPKT 120          
BLAST of mRNA_P-wetherbeei_contig2147.4.1 vs. uniprot
Match: A0A521M838_9HYPH (Uncharacterized protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521M838_9HYPH)

HSP 1 Score: 177 bits (450), Expect = 1.480e-55
Identity = 88/120 (73.33%), Postives = 97/120 (80.83%), Query Frame = 1
Query:    1 MKMPENTNAYLWGAAVGAIALAVVGFGWGGWVTGGTSTKTAATAAADAKVAVLAPICADRFRAQGDSAVKIAELTKASTWDRGNVVEKSGFATMPGSKTTDSDVARACAEILANPPTPKT 360
            M MP+N ++ +W AA GA    ++GF WGGWVTGGT+ K  A+AA  A VA LAPICADRFRAQ DSAVKIAELTKASTWDRGNVV KSG+ATMPG K  DSDVARAC EILANPPTPKT
Sbjct:    1 MAMPKNISSLIWSAAGGAAVCMIIGFSWGGWVTGGTARKDTASAAQSAVVAALAPICADRFRAQSDSAVKIAELTKASTWDRGNVVAKSGYATMPGKKDADSDVARACGEILANPPTPKT 120          
BLAST of mRNA_P-wetherbeei_contig2147.4.1 vs. uniprot
Match: A0A6A7MFN1_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6A7MFN1_9PROT)

HSP 1 Score: 169 bits (427), Expect = 4.720e-52
Identity = 82/119 (68.91%), Postives = 95/119 (79.83%), Query Frame = 1
Query:    1 MKMPENTNAYLWGAAVGAIALAVVGFGWGGWVTGGTSTKTAATAAADAKVAVLAPICADRFRAQGDSAVKIAELTKASTWDRGNVVEKSGFATMPGSKTTDSDVARACAEILANPPTPK 357
            MK P NT   +WGA +GA+A  ++GF WGGWVTGGT+ K AATAA  A V  LAPICA ++RAQ D   KIAEL KAS+W+RG+VVEKSG+A MPGSKTTDSDVARACAE+LA PPTPK
Sbjct:    1 MKFPTNTKPMVWGAVIGAVACMIIGFSWGGWVTGGTARKDAATAAHAAVVVALAPICAAQYRAQSDGPAKIAELAKASSWERGSVVEKSGYALMPGSKTTDSDVARACAEMLATPPTPK 119          
BLAST of mRNA_P-wetherbeei_contig2147.4.1 vs. uniprot
Match: A0A521RK06_9HYPH (Uncharacterized protein n=2 Tax=unclassified Reyranella TaxID=2630009 RepID=A0A521RK06_9HYPH)

HSP 1 Score: 168 bits (426), Expect = 6.710e-52
Identity = 83/120 (69.17%), Postives = 93/120 (77.50%), Query Frame = 1
Query:    1 MKMPENTNAYLWGAAVGAIALAVVGFGWGGWVTGGTSTKTAATAAADAKVAVLAPICADRFRAQGDSAVKIAELTKASTWDRGNVVEKSGFATMPGSKTTDSDVARACAEILANPPTPKT 360
            M+MP+N +  +W A  GA+    VGF WGGWVTGGT+ K +A A  DA V  LAPIC DRF  Q D+AVKIAEL KASTWDRGNV+ KSGFATMPG+K  DSDVARACAEILANPPTPKT
Sbjct:    1 MEMPKNISTLIWSAVGGAVLTMAVGFTWGGWVTGGTARKESAAAVRDAVVVALAPICVDRFSRQSDAAVKIAELGKASTWDRGNVIAKSGFATMPGAKDADSDVARACAEILANPPTPKT 120          
BLAST of mRNA_P-wetherbeei_contig2147.4.1 vs. uniprot
Match: A0A259MTT0_9PROT (Uncharacterized protein n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A259MTT0_9PROT)

HSP 1 Score: 166 bits (421), Expect = 3.870e-51
Identity = 81/120 (67.50%), Postives = 95/120 (79.17%), Query Frame = 1
Query:    1 MKMPENTNAYLWGAAVGAIALAVVGFGWGGWVTGGTSTKTAATAAADAKVAVLAPICADRFRAQGDSAVKIAELTKASTWDRGNVVEKSGFATMPGSKTTDSDVARACAEILANPPTPKT 360
            M+MP+N +  +W A  GA+  AVVGF WGGWVTGGT++K +A AA DA V  LAPIC DRF  Q D+A KI EL+K STWDRGNV+ KSGFATMPG+K  +SDVARACAEILANPPTPK+
Sbjct:    1 MEMPKNISTLIWTAVGGAVLCAVVGFTWGGWVTGGTASKESAAAARDAVVVALAPICVDRFNRQPDAATKITELSKTSTWDRGNVIAKSGFATMPGAKDAESDVARACAEILANPPTPKS 120          
BLAST of mRNA_P-wetherbeei_contig2147.4.1 vs. uniprot
Match: A0A537N6T6_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537N6T6_9PROT)

HSP 1 Score: 159 bits (402), Expect = 3.030e-48
Identity = 80/120 (66.67%), Postives = 94/120 (78.33%), Query Frame = 1
Query:    1 MKMPENTNAYLWGAAVGAIALAVVGFGWGGWVTGGTSTKTAATAAADAKVAVLAPICADRFRAQGDSAVKIAELTKASTWDRGNVVEKSGFATMPGSKTTDSDVARACAEILANPPTPKT 360
            M +P NT  ++ GA VGA+A A++GF WGGWVTGG+S K AA AA DA V+ LA ICADRFRAQ D+A K+ EL+K S+WDRGN +EKSGFA MPG+KT DSDVARACAE LA   TPKT
Sbjct:    1 MNIPTNTKPWIQGAVVGAVAAAIIGFSWGGWVTGGSSDKRAAVAAHDATVSALASICADRFRAQVDAAGKLVELSKTSSWDRGNFIEKSGFALMPGNKTADSDVARACAESLAVVTTPKT 120          
BLAST of mRNA_P-wetherbeei_contig2147.4.1 vs. uniprot
Match: UPI001E51F7B7 (hypothetical protein n=1 Tax=Reyranella aquatilis TaxID=2035356 RepID=UPI001E51F7B7)

HSP 1 Score: 159 bits (402), Expect = 3.030e-48
Identity = 78/120 (65.00%), Postives = 92/120 (76.67%), Query Frame = 1
Query:    1 MKMPENTNAYLWGAAVGAIALAVVGFGWGGWVTGGTSTKTAATAAADAKVAVLAPICADRFRAQGDSAVKIAELTKASTWDRGNVVEKSGFATMPGSKTTDSDVARACAEILANPPTPKT 360
            M MP+N +  +W A  GA+    +GF WGGWVTGGT+ K +A+A  DA V  LAPIC DRF+ Q D+A KIAEL KASTW+RG VV KSGFATMPGSK  D+DVARACAE+LA+PPTPKT
Sbjct:    1 MTMPKNVSTLIWSAIGGAVLCMAIGFTWGGWVTGGTARKESASAVRDAVVVALAPICVDRFKRQDDAAGKIAELGKASTWERGTVVAKSGFATMPGSKEADNDVARACAEMLASPPTPKT 120          
BLAST of mRNA_P-wetherbeei_contig2147.4.1 vs. uniprot
Match: A0A521QNJ8_9HYPH (Uncharacterized protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521QNJ8_9HYPH)

HSP 1 Score: 158 bits (399), Expect = 9.250e-48
Identity = 74/117 (63.25%), Postives = 91/117 (77.78%), Query Frame = 1
Query:    7 MPENTNAYLWGAAVGAIALAVVGFGWGGWVTGGTSTKTAATAAADAKVAVLAPICADRFRAQGDSAVKIAELTKASTWDRGNVVEKSGFATMPGSKTTDSDVARACAEILANPPTPK 357
            +P+N ++Y W A  GA+  A+VGF WGGWVTGG++ K A T A DA V  LAPIC +RF AQ D+A K+ EL KAS+WDRGNV+ +SG+ATMPG+K  DSDVARACAE+LANPP PK
Sbjct:    5 IPKNASSYFWAAVGGAVVCALVGFTWGGWVTGGSAQKQATTQARDAVVTALAPICVERFNAQSDAAAKVVELAKASSWDRGNVIGRSGYATMPGAKDFDSDVARACAELLANPPKPK 121          
BLAST of mRNA_P-wetherbeei_contig2147.4.1 vs. uniprot
Match: A0A1T4TNK0_9HYPH (Uncharacterized protein n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4TNK0_9HYPH)

HSP 1 Score: 157 bits (397), Expect = 1.750e-47
Identity = 76/120 (63.33%), Postives = 93/120 (77.50%), Query Frame = 1
Query:    1 MKMPENTNAYLWGAAVGAIALAVVGFGWGGWVTGGTSTKTAATAAADAKVAVLAPICADRFRAQGDSAVKIAELTKASTWDRGNVVEKSGFATMPGSKTTDSDVARACAEILANPPTPKT 360
            M++P NT   LWGA  GA+  A+VGF WGGWVTGG++ + AA +A DA V  LAPICA+RFRAQ D A ++A L K+S+W+RG +VEKSGFA MPGSKTTDSDVARAC E+LA P  PK+
Sbjct:    1 MQVPANTKPILWGAVGGAVVCAIVGFTWGGWVTGGSARQQAAASARDAVVTALAPICAERFRAQADGAAQVAALAKSSSWERGAIVEKSGFALMPGSKTTDSDVARACGEMLATPLVPKS 120          
BLAST of mRNA_P-wetherbeei_contig2147.4.1 vs. uniprot
Match: A0A1H8UV06_9PROT (Uncharacterized protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8UV06_9PROT)

HSP 1 Score: 156 bits (395), Expect = 3.530e-47
Identity = 76/120 (63.33%), Postives = 96/120 (80.00%), Query Frame = 1
Query:    1 MKMPENTNAYLWGAAVGAIALAVVGFGWGGWVTGGTSTKTAATAAADAKVAVLAPICADRFRAQGDSAVKIAELTKASTWDRGNVVEKSGFATMPGSKTTDSDVARACAEILANPPTPKT 360
            MK+P++T   + GA +GA+A AV+GF WGGWVTG T+ K A  AA +A VA LAP CADRFRAQGD+  ++AELTKASTW+R +V+EKSGFA++PGSK+ DSD+ARAC E+L  P TPKT
Sbjct:    1 MKIPKDTKPLIQGAVIGAVACAVLGFTWGGWVTGSTARKDAGVAAHNATVATLAPFCADRFRAQGDAPARMAELTKASTWERTSVLEKSGFASLPGSKSGDSDIARACVELLLAPATPKT 120          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2147.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F2ZVR3_9PROT6.640e-6886.67Uncharacterized protein n=2 Tax=Alphaproteobacteri... [more]
A0A521M838_9HYPH1.480e-5573.33Uncharacterized protein n=1 Tax=Reyranella sp. Tax... [more]
A0A6A7MFN1_9PROT4.720e-5268.91Uncharacterized protein n=1 Tax=Rhodospirillales b... [more]
A0A521RK06_9HYPH6.710e-5269.17Uncharacterized protein n=2 Tax=unclassified Reyra... [more]
A0A259MTT0_9PROT3.870e-5167.50Uncharacterized protein n=2 Tax=Rhodospirillales T... [more]
A0A537N6T6_9PROT3.030e-4866.67Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
UPI001E51F7B73.030e-4865.00hypothetical protein n=1 Tax=Reyranella aquatilis ... [more]
A0A521QNJ8_9HYPH9.250e-4863.25Uncharacterized protein n=1 Tax=Reyranella sp. Tax... [more]
A0A1T4TNK0_9HYPH1.750e-4763.33Uncharacterized protein n=1 Tax=Enhydrobacter aero... [more]
A0A1H8UV06_9PROT3.530e-4763.33Uncharacterized protein n=2 Tax=Alphaproteobacteri... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2147contigP-wetherbeei_contig2147:3143..3505 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1205680.CAKO01000007_gene4469
Model size363
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categorysignal peptide
Exons1
Evalue2.24e-45
EggNOG OGs2E46N@1|root,32Z2M@2|Bacteria,1N6SH@1224|Proteobacteria,2UHDJ@28211|Alphaproteobacteria,2JYDP@204441|Rhodospirillales
Cds size363
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186226.4966652-CDS-P-wetherbeei_contig2147:3142..35051683186226.4966652-CDS-P-wetherbeei_contig2147:3142..3505Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2147 3143..3505 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2147.4.1prot_P-wetherbeei_contig2147.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig2147 3143..3505 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig2147.4.1

>prot_P-wetherbeei_contig2147.4.1 ID=prot_P-wetherbeei_contig2147.4.1|Name=mRNA_P-wetherbeei_contig2147.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=121bp
MKMPENTNAYLWGAAVGAIALAVVGFGWGGWVTGGTSTKTAATAAADAKV
AVLAPICADRFRAQGDSAVKIAELTKASTWDRGNVVEKSGFATMPGSKTT
DSDVARACAEILANPPTPKT*
back to top

mRNA from alignment at P-wetherbeei_contig2147:3143..3505-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig2147.4.1 ID=mRNA_P-wetherbeei_contig2147.4.1|Name=mRNA_P-wetherbeei_contig2147.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=363bp|location=Sequence derived from alignment at P-wetherbeei_contig2147:3143..3505- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGATGCCCGAGAACACCAACGCCTATCTGTGGGGCGCCGCGGTCGG TGCCATCGCGCTCGCCGTCGTGGGCTTCGGCTGGGGCGGCTGGGTGACCG GCGGAACCTCGACCAAGACCGCCGCCACTGCCGCTGCCGACGCCAAGGTG GCCGTCCTCGCGCCGATCTGCGCCGACCGCTTCCGCGCCCAGGGCGACTC CGCGGTCAAGATCGCCGAACTCACCAAGGCCAGCACCTGGGATCGCGGCA ATGTCGTCGAGAAGAGCGGCTTTGCCACCATGCCGGGCAGCAAGACGACG GACTCCGACGTCGCACGCGCCTGCGCCGAAATCCTCGCGAACCCGCCGAC CCCCAAGACCTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig2147:3143..3505-

>mRNA_P-wetherbeei_contig2147.4.1 ID=mRNA_P-wetherbeei_contig2147.4.1|Name=mRNA_P-wetherbeei_contig2147.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=363bp|location=Sequence derived from alignment at P-wetherbeei_contig2147:3143..3505- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGATGCCCGAGAACACCAACGCCTATCTGTGGGGCGCCGCGGTCGG
TGCCATCGCGCTCGCCGTCGTGGGCTTCGGCTGGGGCGGCTGGGTGACCG
GCGGAACCTCGACCAAGACCGCCGCCACTGCCGCTGCCGACGCCAAGGTG
GCCGTCCTCGCGCCGATCTGCGCCGACCGCTTCCGCGCCCAGGGCGACTC
CGCGGTCAAGATCGCCGAACTCACCAAGGCCAGCACCTGGGATCGCGGCA
ATGTCGTCGAGAAGAGCGGCTTTGCCACCATGCCGGGCAGCAAGACGACG
GACTCCGACGTCGCACGCGCCTGCGCCGAAATCCTCGCGAACCCGCCGAC
CCCCAAGACCTGA
back to top