mRNA_P-wetherbeei_contig21445.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig21445.1.1
Unique NamemRNA_P-wetherbeei_contig21445.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig21445.1.1 vs. uniprot
Match: A0A5J6MKD7_9PROT (N-formylglutamate deformylase n=1 Tax=Hypericibacter terrae TaxID=2602015 RepID=A0A5J6MKD7_9PROT)

HSP 1 Score: 314 bits (805), Expect = 6.270e-105
Identity = 152/256 (59.38%), Postives = 190/256 (74.22%), Query Frame = 1
Query:   22 FERGRLPLLVSMPHVGTQLPGAIAARLTPAALTLADTDWHLPRLYNFLGAMGANLLVAINSRYVIDLNRDPTGVPLYPGADNTELCPLSTAQRQPVYLPGQAPDAGEIDERIATYWRPYHDKLADTLAEIKARHGYALLFDAHSIKSVLPRFFDGRLPDINLGTADQTSADPSIGSGLLETAQGYPAYSTVLNGRFKGGYITRHHGCPAERVHAVQLELAWRTYMDEGGSFAFDEAGASGVRPALRAVIDRLVELG 789
            F+ G  PLL+SMPHVGT LP A+A R+T AA ++ DTDWH+ RLY+F  ++GANLL+A +SRYVIDLNR P G  LYPGA NTELCP ++   +P++ PG+AP A E  +R+ TYWRPYH +LA  LAEI++R G ALLFDAHSI+S + RFF GRLPDINLGTAD  SA   + + L+E A     YS+VLNGRFKGGYITRH+G PAE V AVQLEL+  TYMDE   F F E  A G+RP LR +++ +++ G
Sbjct:    6 FQPGPAPLLISMPHVGTHLPDALARRMTDAARSVPDTDWHVDRLYDFAASLGANLLMATHSRYVIDLNRPPDGTVLYPGASNTELCPTTSFDDEPLWRPGEAPGADEAKQRVETYWRPYHARLAQMLAEIRSRFGTALLFDAHSIRSEVSRFFAGRLPDINLGTADGKSAPSELAARLIEAAGEADGYSSVLNGRFKGGYITRHYGKPAEGVAAVQLELSQITYMDEDPPFGFREDRAKGIRPHLRRILETMLDWG 261          
BLAST of mRNA_P-wetherbeei_contig21445.1.1 vs. uniprot
Match: A0A522EGA7_9BURK (N-formylglutamate deformylase n=2 Tax=Pandoraea TaxID=93217 RepID=A0A522EGA7_9BURK)

HSP 1 Score: 313 bits (801), Expect = 2.140e-104
Identity = 147/260 (56.54%), Postives = 188/260 (72.31%), Query Frame = 1
Query:    1 MADFTWFFERGRLPLLVSMPHVGTQLPGAIAARLTPAALTLADTDWHLPRLYNFLGAMGANLLVAINSRYVIDLNRDPTGVPLYPGADNTELCPLSTAQRQPVYLPGQAPDAGEIDERIATYWRPYHDKLADTLAEIKARHGYALLFDAHSIKSVLPRFFDGRLPDINLGTADQTSADPSIGSGLLETAQGYPAYSTVLNGRFKGGYITRHHGCPAERVHAVQLELAWRTYMDEGGSFAFDEAGASGVRPALRAVIDRLV 780
            M   T+   RGR+P+LVSMPHVGT +P A+AA +TP A  + DTDWHL RLY+FL ++G ++LV ++SRYVIDLNR P  V LYPG D T LCP+ T  R+P+Y PG+APD   I +R+A YW+PYH  L + LA I A+HG ALL+DAHSI+S +PRFFDGRLPD N GTA   S  P +G  L +    + AYSTVLNGRFKGGYITR +G PA+ +HAVQLEL+  TYM E   +AFD+  A+ VRP L A+++ ++
Sbjct:    1 MKTPTFSLRRGRVPMLVSMPHVGTAIPAALAAGMTPVASRVDDTDWHLERLYDFLDSLGVSILVPVHSRYVIDLNRPPDNVNLYPGQDTTGLCPVDTFDREPLYGPGRAPDEAAIAQRVAAYWQPYHTALQEELARIHAQHGRALLWDAHSIRSQVPRFFDGRLPDFNFGTASGASCGPGLGERLRDIVATHGAYSTVLNGRFKGGYITRQYGRPAQHIHAVQLELSQITYMQETLPYAFDDTRAAAVRPVLHALVEAML 260          
BLAST of mRNA_P-wetherbeei_contig21445.1.1 vs. uniprot
Match: G2J125_PSEUL (N-formylglutamate amidohydrolase n=4 Tax=Pseudogulbenkiania TaxID=568394 RepID=G2J125_PSEUL)

HSP 1 Score: 311 bits (796), Expect = 1.360e-103
Identity = 144/253 (56.92%), Postives = 183/253 (72.33%), Query Frame = 1
Query:   25 ERGRLPLLVSMPHVGTQLPGAIAARLTPAALTLADTDWHLPRLYNFLGAMGANLLVAINSRYVIDLNRDPTGVPLYPGADNTELCPLSTAQRQPVYLPGQAPDAGEIDERIATYWRPYHDKLADTLAEIKARHGYALLFDAHSIKSVLPRFFDGRLPDINLGTADQTSADPSIGSGLLETAQGYPAYSTVLNGRFKGGYITRHHGCPAERVHAVQLELAWRTYMDEGGSFAFDEAGASGVRPALRAVIDRLVE 783
            +RG  PLL+SMPHVGT+LP  +A RL P A  L DTDWHLPRLY+F  A+GA++L+   SRYV+DLNR P    LYPG D T LCP+ T  + P+Y  G+ PD+ EI+ R+  YWRPYH  L D LA I+A HG ALL++AHSI+S +PRFF+GRLPD NLG+A   S    +G  LL  AQG+PAYS VLNGRFKGGYITR +G P + VHA+QLEL+  TYM+E   +A+DE  A+ V+P LRA++  L++
Sbjct:    9 QRGSAPLLISMPHVGTELPAELAGRLAPVAAELDDTDWHLPRLYDFAAALGASILIPRYSRYVVDLNRPPDNANLYPGQDTTGLCPVDTFAKVPLYRAGEEPDSAEIERRVERYWRPYHQALQDELARIQAEHGVALLWEAHSIRSEVPRFFEGRLPDFNLGSAGGASCGAGLGERLLAVAQGFPAYSAVLNGRFKGGYITRAYGQPGDDVHAIQLELSLATYMEEQAPYAYDETRAARVQPVLRALLASLLQ 261          
BLAST of mRNA_P-wetherbeei_contig21445.1.1 vs. uniprot
Match: A0A5J6MWP0_9PROT (N-formylglutamate deformylase n=1 Tax=Hypericibacter adhaerens TaxID=2602016 RepID=A0A5J6MWP0_9PROT)

HSP 1 Score: 308 bits (790), Expect = 1.190e-102
Identity = 151/254 (59.45%), Postives = 185/254 (72.83%), Query Frame = 1
Query:   22 FERGRLPLLVSMPHVGTQLPGAIAARLTPAALTLADTDWHLPRLYNFLGAMGANLLVAINSRYVIDLNRDPTGVPLYPGADNTELCPLSTAQRQPVYLPGQAPDAGEIDERIATYWRPYHDKLADTLAEIKARHGYALLFDAHSIKSVLPRFFDGRLPDINLGTADQTSADPSIGSGLLETAQGYPAYSTVLNGRFKGGYITRHHGCPAERVHAVQLELAWRTYMDEGGSFAFDEAGASGVRPALRAVIDRLVE 783
            FE G  PLL+SMPHVGT LP  +A R+T  A T+ DTDWH+ RLY+F  A+GAN L+A +SRYVIDLNR P G  LYPGA NTELCP ++   +P++ P QAP A EI +R+ ++WRPYH +LAD LA IK+R G ALLFDAHSI+S +PRFF GRLPDINLGTAD  SA   + + L+E A     YS+VLNGRFKGGYITR +G PAE + AVQLEL+  TYMDE   F F E  A  VRP LR +++ ++E
Sbjct:    6 FEPGPAPLLISMPHVGTHLPDVLARRMTDVARTVPDTDWHVDRLYDFAAALGANRLIATHSRYVIDLNRPPDGTVLYPGASNTELCPTTSFDDEPLWQPDQAPGAEEIRQRVESFWRPYHKQLADALAAIKSRFGMALLFDAHSIRSEVPRFFAGRLPDINLGTADGKSAPSELAARLIEAAGEADGYSSVLNGRFKGGYITRLYGKPAEGIAAVQLELSQITYMDEAPPFGFREDRAKAVRPHLRRILETMLE 259          
BLAST of mRNA_P-wetherbeei_contig21445.1.1 vs. uniprot
Match: UPI0019DDCE98 (N-formylglutamate deformylase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019DDCE98)

HSP 1 Score: 302 bits (774), Expect = 2.700e-100
Identity = 139/260 (53.46%), Postives = 184/260 (70.77%), Query Frame = 1
Query:   16 WFFERGRLPLLVSMPHVGTQLPGAIAARLTPAALTLADTDWHLPRLYNFLGAMGANLLVAINSRYVIDLNRDPTGVPLYPGADNTELCPLSTAQRQPVYLPGQAPDAGEIDERIATYWRPYHDKLADTLAEIKARHGYALLFDAHSIKSVLPRFFDGRLPDINLGTADQTSADPSIGSGLLETAQGYPAYSTVLNGRFKGGYITRHHGCPAERVHAVQLELAWRTYMDEGGSFAFDEAGASGVRPALRAVIDRLVELGAT 795
            + F +G  PLLVSMPHVG  +P  IAA +TP A T++DTDWH+ RLY+FL  +GA+ + A +SRYV+DLNR P G  LYPG   T LCP  T   +P+Y  G AP   EI+ R+A YW+PYHDKL   LA +KA HGYALL+DAHSI+SV+PR F+G LPD+N+GTA+  S DP +   +L+ A+    YS VLNGRFKGGYITR +G P + +HA+QLEL+ RTYM+E   F F E  A GVRP +++++  +++  +T
Sbjct:    4 FIFRQGAGPLLVSMPHVGLHIPDDIAADMTPLARTVSDTDWHIDRLYDFLDDLGASAIAATHSRYVVDLNRSPDGASLYPGQATTGLCPAGTFDDEPLYRDGAAPGQAEIERRVARYWKPYHDKLEAELARLKAAHGYALLWDAHSIRSVVPRLFEGPLPDLNIGTANGASCDPDMARRVLQAAESAQGYSAVLNGRFKGGYITRRYGQPDDDIHAIQLELSQRTYMEESSPFTFREELAEGVRPVIKSMLTAMLDWAST 263          
BLAST of mRNA_P-wetherbeei_contig21445.1.1 vs. uniprot
Match: A0A8I1R7Z9_9BURK (N-formylglutamate deformylase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A8I1R7Z9_9BURK)

HSP 1 Score: 302 bits (773), Expect = 3.580e-100
Identity = 149/253 (58.89%), Postives = 181/253 (71.54%), Query Frame = 1
Query:   22 FERGRLPLLVSMPHVGTQLPGAIAARLTPAALTLADTDWHLPRLYNFLGAMGANLLVAINSRYVIDLNRDPTGVPLYPGADNTELCPLSTAQRQPVYLPGQAPDAGEIDERIATYWRPYHDKLADTLAEIKARHGYALLFDAHSIKSVLPRFFDGRLPDINLGTADQTSADPSIGSGLLETAQGYPAYSTVLNGRFKGGYITRHHGCPAERVHAVQLELAWRTYMDEGGSFAFDEAGASGVRPALRAVIDRLV 780
            F  G  PLLVSMPH GT LP A+A R+TPAAL L DTDWHL RLY+FL  +GA++L A +SRYVIDLNR P    LYPG   T L P+ T   +PVY PG+ P   E  ERI   W+PYHD+LA  LAE+ ARHG ALL+DAHSI+SV+PRFF+GRLPD+NLGTAD  S DP++ + L   A     YS+VL+GRFKGGYITR +G P E VHAVQLELA   YMD+   FAF E  A+ +RP LRA+++ ++
Sbjct:    6 FRAGTTPLLVSMPHRGTWLPEALARRMTPAALALPDTDWHLERLYDFLDEIGASVLEATHSRYVIDLNRPPDDASLYPGRSTTGLVPIDTFAGEPVYRPGETPQESETAERIERCWKPYHDRLAQALAELHARHGVALLWDAHSIRSVVPRFFEGRLPDLNLGTADGRSCDPALAARLAAVAGAAAGYSSVLDGRFKGGYITRRYGRPQEGVHAVQLELALCAYMDDDPPFAFREPLAARLRPHLRAMLEAML 258          
BLAST of mRNA_P-wetherbeei_contig21445.1.1 vs. uniprot
Match: A0A848YXZ7_9PROT (N-formylglutamate deformylase n=1 Tax=Inquilinus sp. TaxID=1932117 RepID=A0A848YXZ7_9PROT)

HSP 1 Score: 301 bits (770), Expect = 1.210e-99
Identity = 145/258 (56.20%), Postives = 178/258 (68.99%), Query Frame = 1
Query:   28 RGRLPLLVSMPHVGTQLPGAIAARLTPAALTLADTDWHLPRLYNFLGAMGANLLVAINSRYVIDLNRDPTGVPLYPGADNTELCPLSTAQRQPVYLPGQAPDAGEIDERIATYWRPYHDKLADTLAEIKARHGYALLFDAHSIKSVLPRFFDGRLPDINLGTADQTSADPSIGSGLLETAQGYPAYSTVLNGRFKGGYITRHHGCPAERVHAVQLELAWRTYMDEGGSFAFDEAGASGVRPALRAVIDRLVELGATLY 801
            RG  PLLVS+PH G ++P AIAAR T AA  L DTDWH+ RLY+    +GA LL A +SRYVIDLNRDP G PLYPGADNTELCP S     P+Y  G APDA E+  R   YW+PYH  LA  L  +K +HGYALL+DAHSI+  +PRFF+G LPD+N+GT    +ADP++   L    Q    Y T +NGRFKGGYITR +G PA  +HAVQ+ELA  TYMDE   +A+DE  A  +RP LR V+++++E GA  Y
Sbjct:    8 RGSTPLLVSVPHAGIEVPDAIAARFTEAARALPDTDWHVDRLYDMALELGAGLLAATHSRYVIDLNRDPDGTPLYPGADNTELCPTSLFDGGPLYRDGAAPDADEVTARRDAYWKPYHAMLAAELDRLKRKHGYALLYDAHSIRGQVPRFFEGTLPDLNIGTGGGKTADPALTIRLTLLCQDTHGYETAVNGRFKGGYITRRYGDPAAGIHAVQMELAQSTYMDEDPPYAYDEEKADRLRPLLRRVLEKMLEWGARKY 265          
BLAST of mRNA_P-wetherbeei_contig21445.1.1 vs. uniprot
Match: A0A536XWX7_9PROT (N-formylglutamate deformylase n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536XWX7_9PROT)

HSP 1 Score: 298 bits (764), Expect = 9.220e-99
Identity = 146/256 (57.03%), Postives = 184/256 (71.88%), Query Frame = 1
Query:   22 FERGRLPLLVSMPHVGTQLPGAIAARLTPAALTLADTDWHLPRLYNFLGAMGANLLVAINSRYVIDLNRDPTGVPLYPGADNTELCPLSTAQRQPVYLPGQAPDAGEIDERIATYWRPYHDKLADTLAEIKARHGYALLFDAHSIKSVLPRFFDGRLPDINLGTADQTSADPSIGSGLLETAQGYPAYSTVLNGRFKGGYITRHHGCPAERVHAVQLELAWRTYMDEGGSFAFDEAGASGVRPALRAVIDRLVELG 789
            +  G++P+LVSMPH GT +P  +A RL+PAA  L DTDWHL RLY+FLG +GA++LVA +SRYV+DLNR P    LYPG   T + P+ T   +P+YLPG AP   E+ ER+  YW+PYH +L   LA+IKA+HGYALL+DAHSI SVLPRFF G+LPD+NLGTAD  S    IG  L ++ +GY   S VLNGRFKGGYITR +G PA+ VHAVQLEL+  TYMDE   + F E  A  +RP LR +++ L+ LG
Sbjct:    6 YREGKVPVLVSMPHTGTFIPEWLAPRLSPAARALPDTDWHLERLYDFLGEIGASVLVATHSRYVVDLNRPPDNANLYPGQHTTGIVPMDTFHCEPIYLPGFAPSDDEVAERLRVYWQPYHQRLQQALAQIKAKHGYALLWDAHSIFSVLPRFFAGKLPDLNLGTADGKSCAAGIGEALEKSVEGY---SAVLNGRFKGGYITRRYGEPAKGVHAVQLELSEATYMDEQPPYGFREDLARELRPQLRTLVELLLMLG 258          
BLAST of mRNA_P-wetherbeei_contig21445.1.1 vs. uniprot
Match: UPI0005790A42 (N-formylglutamate deformylase n=1 Tax=Cupriavidus sp. IDO TaxID=1539142 RepID=UPI0005790A42)

HSP 1 Score: 298 bits (762), Expect = 2.270e-98
Identity = 144/253 (56.92%), Postives = 178/253 (70.36%), Query Frame = 1
Query:   25 ERGRLPLLVSMPHVGTQLPGAIAARLTPAALTLADTDWHLPRLYNFLGAMGANLLVAINSRYVIDLNRDPTGVPLYPGADNTELCPLSTAQRQPVYLPGQAPDAGEIDERIATYWRPYHDKLADTLAEIKARHGYALLFDAHSIKSVLPRFFDGRLPDINLGTADQTSADPSIGSGLLETAQGYPAYSTVLNGRFKGGYITRHHGCPAERVHAVQLELAWRTYMDEGGSFAFDEAGASGVRPALRAVIDRLVE 783
             RG  PLLVSMPHVGT LP  ++ RLT  A T+ DTDWHL RLY+F   +GA++LVA +SRYV+DLNR P    LYPG D T LCP+ T  + P+Y  G  PD  EI  R    WRPYH+ LA+ LA ++A HG   L+DAHSI+SVLPRFFDG+LPD NLGTA+  S D ++   LL+ A   P ++ VLNGRFKGGYITR +G P + VHAVQLELA   YM E   FA+DEA ASG++P+LRA++  L+E
Sbjct:   13 HRGSRPLLVSMPHVGTHLPATVSQRLTAEARTVPDTDWHLERLYDFARELGASVLVATHSRYVVDLNRPPDNANLYPGQDTTGLCPVDTFDKTPLYADGNGPDDAEIAARRDAIWRPYHNALAEELARLRAAHGTIALWDAHSIRSVLPRFFDGKLPDFNLGTANGASCDAALAEQLLDIASAVPGHTAVLNGRFKGGYITRQYGQPEQGVHAVQLELAQSAYMSETYPFAYDEALASGLQPSLRAMLATLLE 265          
BLAST of mRNA_P-wetherbeei_contig21445.1.1 vs. uniprot
Match: UPI001AE96CA5 (N-formylglutamate deformylase n=1 Tax=Azospirillum soli TaxID=1304799 RepID=UPI001AE96CA5)

HSP 1 Score: 296 bits (757), Expect = 1.440e-97
Identity = 141/258 (54.65%), Postives = 182/258 (70.54%), Query Frame = 1
Query:   13 TWFFERGRLPLLVSMPHVGTQLPGAIAARLTPAALTLADTDWHLPRLYNFLGAMGANLLVAINSRYVIDLNRDPTGVPLYPGADNTELCPLSTAQRQPVYLPGQAPDAGEIDERIATYWRPYHDKLADTLAEIKARHGYALLFDAHSIKSVLPRFFDGRLPDINLGTADQ-TSADPSIGSGLLETAQGYPAYSTVLNGRFKGGYITRHHGCPAERVHAVQLELAWRTYMDEGGSFAFDEAGASGVRPALRAVIDRLVE 783
            T+ F+ G  P+L+S+PHVGT +P  IAA +T AAL + DTDWHL RLY+F  A+G   L A  SRYV+DLNRDP G  LYPGA+NTELCPL+T   QP+Y PG+ PDA E++ R+  YWRPYH++L   L  +K R G A+LFDAHSI+S +PRFFDGRLPD NLG+AD  T+A P +G  L+        YS VLNGRFKGG+ITR++G P + +HA+QLE+   TYM+E   F + E  A  VRP+L  ++  +VE
Sbjct:    3 TFRFQPGETPVLLSIPHVGTTVPPDIAATMTDAALAVPDTDWHLDRLYHFAPALGIGFLKATCSRYVVDLNRDPAGSVLYPGANNTELCPLTTFDNQPIYQPGREPDAAEVERRVGAYWRPYHEQLDSELRNLKERFGVAVLFDAHSIRSQVPRFFDGRLPDFNLGSADGVTAAQPLVGR-LMNVLTARERYSAVLNGRFKGGFITRNYGRPEDNIHAIQLEMCQSTYMEESSPFRYREVLAGEVRPSLERLMSAIVE 259          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21445.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5J6MKD7_9PROT6.270e-10559.38N-formylglutamate deformylase n=1 Tax=Hypericibact... [more]
A0A522EGA7_9BURK2.140e-10456.54N-formylglutamate deformylase n=2 Tax=Pandoraea Ta... [more]
G2J125_PSEUL1.360e-10356.92N-formylglutamate amidohydrolase n=4 Tax=Pseudogul... [more]
A0A5J6MWP0_9PROT1.190e-10259.45N-formylglutamate deformylase n=1 Tax=Hypericibact... [more]
UPI0019DDCE982.700e-10053.46N-formylglutamate deformylase n=1 Tax=Proteobacter... [more]
A0A8I1R7Z9_9BURK3.580e-10058.89N-formylglutamate deformylase n=1 Tax=Burkholderia... [more]
A0A848YXZ7_9PROT1.210e-9956.20N-formylglutamate deformylase n=1 Tax=Inquilinus s... [more]
A0A536XWX7_9PROT9.220e-9957.03N-formylglutamate deformylase n=2 Tax=Betaproteoba... [more]
UPI0005790A422.270e-9856.92N-formylglutamate deformylase n=1 Tax=Cupriavidus ... [more]
UPI001AE96CA51.440e-9754.65N-formylglutamate deformylase n=1 Tax=Azospirillum... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig21445contigP-wetherbeei_contig21445:230..1033 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog748280.NH8B_3768
Preferred namehutG
PFAMsFGase
Model size804
Max annot lvl28216|Betaproteobacteria
KEGG rclassRC00165,RC00221,RC00323,RC00681
KEGG koko:K01458,ko:K01479
KEGG ReactionR00525,R02285
KEGG Pathwayko00340,ko00630,ko01100,map00340,map00630,map01100
KEGG ModuleM00045
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.24e-104
EggNOG OGsCOG3741@1|root,COG3741@2|Bacteria,1MY4D@1224|Proteobacteria,2VK2Y@28216|Betaproteobacteria
EC3.5.1.68,3.5.3.8
DescriptionN-formylglutamate amidohydrolase
Cds size804
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186225.848659-CDS-P-wetherbeei_contig21445:229..10331683186225.848659-CDS-P-wetherbeei_contig21445:229..1033Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig21445 230..1033 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig21445.1.1prot_P-wetherbeei_contig21445.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig21445 230..1033 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig21445.1.1

>prot_P-wetherbeei_contig21445.1.1 ID=prot_P-wetherbeei_contig21445.1.1|Name=mRNA_P-wetherbeei_contig21445.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=268bp
MADFTWFFERGRLPLLVSMPHVGTQLPGAIAARLTPAALTLADTDWHLPR
LYNFLGAMGANLLVAINSRYVIDLNRDPTGVPLYPGADNTELCPLSTAQR
QPVYLPGQAPDAGEIDERIATYWRPYHDKLADTLAEIKARHGYALLFDAH
SIKSVLPRFFDGRLPDINLGTADQTSADPSIGSGLLETAQGYPAYSTVLN
GRFKGGYITRHHGCPAERVHAVQLELAWRTYMDEGGSFAFDEAGASGVRP
ALRAVIDRLVELGATLY*
back to top

mRNA from alignment at P-wetherbeei_contig21445:230..1033-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig21445.1.1 ID=mRNA_P-wetherbeei_contig21445.1.1|Name=mRNA_P-wetherbeei_contig21445.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=804bp|location=Sequence derived from alignment at P-wetherbeei_contig21445:230..1033- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTGATTTCACCTGGTTTTTCGAACGTGGGCGCCTGCCGCTTCTGGT GAGCATGCCGCATGTCGGCACCCAGCTGCCCGGCGCCATCGCCGCACGCC TGACCCCTGCTGCGTTGACGCTCGCCGATACCGACTGGCACCTGCCCAGG CTGTACAACTTTCTTGGCGCGATGGGGGCGAACCTGCTGGTAGCGATCAA TTCGCGCTACGTGATCGATCTCAATCGCGACCCGACCGGCGTTCCGCTGT ATCCGGGGGCGGACAATACGGAGCTTTGCCCCCTTTCGACCGCTCAGCGC CAGCCGGTTTACCTGCCGGGGCAGGCGCCGGATGCTGGCGAGATCGACGA ACGGATCGCGACCTACTGGCGGCCGTACCATGACAAGCTGGCCGACACCC TGGCGGAAATCAAGGCGCGGCATGGTTACGCATTGCTGTTTGACGCGCAT TCCATCAAGTCTGTGCTGCCGCGCTTCTTTGACGGACGACTGCCGGACAT CAATCTTGGCACCGCCGATCAAACCAGTGCCGATCCGTCGATCGGGTCGG GGTTGCTGGAAACCGCGCAGGGATATCCGGCCTACAGCACCGTGCTGAAC GGGCGTTTCAAGGGCGGCTACATCACCCGGCACCATGGTTGTCCCGCGGA GCGGGTGCATGCGGTGCAACTGGAGCTGGCTTGGCGCACCTACATGGACG AAGGGGGCAGCTTTGCGTTTGACGAAGCCGGCGCATCGGGCGTGCGCCCG GCGCTGCGCGCGGTAATTGACCGGCTGGTTGAACTGGGCGCCACCCTATA TTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig21445:230..1033-

>mRNA_P-wetherbeei_contig21445.1.1 ID=mRNA_P-wetherbeei_contig21445.1.1|Name=mRNA_P-wetherbeei_contig21445.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=804bp|location=Sequence derived from alignment at P-wetherbeei_contig21445:230..1033- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTGATTTCACCTGGTTTTTCGAACGTGGGCGCCTGCCGCTTCTGGT
GAGCATGCCGCATGTCGGCACCCAGCTGCCCGGCGCCATCGCCGCACGCC
TGACCCCTGCTGCGTTGACGCTCGCCGATACCGACTGGCACCTGCCCAGG
CTGTACAACTTTCTTGGCGCGATGGGGGCGAACCTGCTGGTAGCGATCAA
TTCGCGCTACGTGATCGATCTCAATCGCGACCCGACCGGCGTTCCGCTGT
ATCCGGGGGCGGACAATACGGAGCTTTGCCCCCTTTCGACCGCTCAGCGC
CAGCCGGTTTACCTGCCGGGGCAGGCGCCGGATGCTGGCGAGATCGACGA
ACGGATCGCGACCTACTGGCGGCCGTACCATGACAAGCTGGCCGACACCC
TGGCGGAAATCAAGGCGCGGCATGGTTACGCATTGCTGTTTGACGCGCAT
TCCATCAAGTCTGTGCTGCCGCGCTTCTTTGACGGACGACTGCCGGACAT
CAATCTTGGCACCGCCGATCAAACCAGTGCCGATCCGTCGATCGGGTCGG
GGTTGCTGGAAACCGCGCAGGGATATCCGGCCTACAGCACCGTGCTGAAC
GGGCGTTTCAAGGGCGGCTACATCACCCGGCACCATGGTTGTCCCGCGGA
GCGGGTGCATGCGGTGCAACTGGAGCTGGCTTGGCGCACCTACATGGACG
AAGGGGGCAGCTTTGCGTTTGACGAAGCCGGCGCATCGGGCGTGCGCCCG
GCGCTGCGCGCGGTAATTGACCGGCTGGTTGAACTGGGCGCCACCCTATA
TTGA
back to top