mRNA_P-wetherbeei_contig21410.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21410.2.1 vs. uniprot
Match: A0A1F3YN33_9PROT (DNA mismatch repair protein MutS n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YN33_9PROT) HSP 1 Score: 143 bits (360), Expect = 6.620e-41 Identity = 78/135 (57.78%), Postives = 94/135 (69.63%), Query Frame = 1
Query: 1 MADDDFAKAVADVQPLKXXXXXXXXXXXXXXXXVQMLRDERAALIESIERDVTPDEALETGEELSYLRDGLSKQVLRRLRRGHWVVQAGLDLHGMNRHEAAAKVAEFVALASHRGQRCVRIVHGKGYGSRNRETV 405
M+ D+F +AVADV+PLK Q RDE AAL ES+E + D+AL++GEEL YLRDG+S+QVLRRLRRGHWV+Q GLDLHG+NR +AA VA F+ + RG RCVRIVHGKG GS NRE V
Sbjct: 1 MSSDEFREAVADVKPLKRSRRIALKGPAPAPVPEQRRRDEIAALAESLEGPTSVDDALDSGEELVYLRDGMSRQVLRRLRRGHWVIQDGLDLHGLNRDQAAVAVAAFLHQCAARGLRCVRIVHGKGLGSHNREPV 135
BLAST of mRNA_P-wetherbeei_contig21410.2.1 vs. uniprot
Match: A0A521VYM1_9PROT (DNA mismatch repair protein MutS n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521VYM1_9PROT) HSP 1 Score: 143 bits (361), Expect = 8.910e-41 Identity = 80/133 (60.15%), Postives = 93/133 (69.92%), Query Frame = 1
Query: 7 DDDFAKAVADVQPLKXXXXXXXXXXXXXXXXVQMLRDERAALIESIERDVTPDEALETGEELSYLRDGLSKQVLRRLRRGHWVVQAGLDLHGMNRHEAAAKVAEFVALASHRGQRCVRIVHGKGYGSRNRETV 405
D+DF +AVADV PLK VQ RDERAAL ES+ + ++AL++GEELSYLRDGL +QVLRRLRRGHWVVQA LDLHGMNR AA VA F+ + RG RCVRIVHG+G GS+NRE V
Sbjct: 13 DEDFRQAVADVVPLKRERRHALKGPPPAPHAVQRRRDERAALHESLHAPFSIEDALDSGEELSYLRDGLPRQVLRRLRRGHWVVQASLDLHGMNRVVAAEAVAAFLRAGAARGARCVRIVHGRGLGSKNREPV 145
BLAST of mRNA_P-wetherbeei_contig21410.2.1 vs. uniprot
Match: A0A1F4BD61_9PROT (Smr domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_19 TaxID=1797491 RepID=A0A1F4BD61_9PROT) HSP 1 Score: 142 bits (359), Expect = 1.640e-40 Identity = 79/133 (59.40%), Postives = 93/133 (69.92%), Query Frame = 1
Query: 7 DDDFAKAVADVQPLKXXXXXXXXXXXXXXXXVQMLRDERAALIESIERDVTPDEALETGEELSYLRDGLSKQVLRRLRRGHWVVQAGLDLHGMNRHEAAAKVAEFVALASHRGQRCVRIVHGKGYGSRNRETV 405
D+DF +AVADV PLK Q RDERAAL ES+ + ++AL++GEEL+YLRDGLS+QVLRRLRRGHWVVQA LDLHGMNR AA VA F+ + RG RCVRIVHG+G GS+NRE V
Sbjct: 23 DEDFRQAVADVVPLKRDRRHALKEPPPTPHAAQRRRDERAALHESLHAPFSIEDALDSGEELTYLRDGLSRQVLRRLRRGHWVVQANLDLHGMNRVVAAEAVAAFLRAGAARGARCVRIVHGRGLGSKNREPV 155
BLAST of mRNA_P-wetherbeei_contig21410.2.1 vs. uniprot
Match: A0A1F3Z252_9PROT (Smr domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_67_12 TaxID=1797483 RepID=A0A1F3Z252_9PROT) HSP 1 Score: 142 bits (357), Expect = 2.850e-40 Identity = 80/133 (60.15%), Postives = 92/133 (69.17%), Query Frame = 1
Query: 7 DDDFAKAVADVQPLKXXXXXXXXXXXXXXXXVQMLRDERAALIESIERDVTPDEALETGEELSYLRDGLSKQVLRRLRRGHWVVQAGLDLHGMNRHEAAAKVAEFVALASHRGQRCVRIVHGKGYGSRNRETV 405
D +F AV DV PL VQ RDERAAL ES+ V+ D+AL++GEEL +LRDGL +QVLRRLRRGHWVVQA LDLHGMNR AAA VA+F+ ++ RG RCVRIVHGKG GSRNRE V
Sbjct: 17 DPEFRTAVLDVAPLGGARRHALKRPAAPPVPVQTRRDERAALYESLHGPVSVDDALDSGEELVFLRDGLPRQVLRRLRRGHWVVQASLDLHGMNRVAAAAAVADFLRSSAARGARCVRIVHGKGLGSRNREPV 149
BLAST of mRNA_P-wetherbeei_contig21410.2.1 vs. uniprot
Match: A0A1F4F9L3_9PROT (Smr domain-containing protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4F9L3_9PROT) HSP 1 Score: 139 bits (351), Expect = 1.770e-39 Identity = 82/133 (61.65%), Postives = 98/133 (73.68%), Query Frame = 1
Query: 7 DDDFAKAVADVQPLKXXXXXXXXXXXXXXXXVQMLRDERAALIESIERDVTPDEALETGEELSYLRDGLSKQVLRRLRRGHWVVQAGLDLHGMNRHEAAAKVAEFVALASHRGQRCVRIVHGKGYGSRNRETV 405
D +F +AVADV PLK XXXX +Q RDERAAL ES+ V+ D+AL++GEEL++LR+GLS+QVLRRLRRGHWVVQ GLDLHGMNR AA VA F+ ++ G RCVRIVHGKG GS+NRE V
Sbjct: 8 DAEFRQAVADVAPLKRQHRHALKAPXXXXHALQRRRDERAALHESLHGPVSLDDALDSGEELTFLREGLSRQVLRRLRRGHWVVQDGLDLHGMNRVAAAEAVAVFLRASAAHGLRCVRIVHGKGLGSKNREPV 140
BLAST of mRNA_P-wetherbeei_contig21410.2.1 vs. uniprot
Match: A0A521VG30_9PROT (DNA mismatch repair protein MutS n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521VG30_9PROT) HSP 1 Score: 138 bits (348), Expect = 7.570e-39 Identity = 77/133 (57.89%), Postives = 93/133 (69.92%), Query Frame = 1
Query: 7 DDDFAKAVADVQPLKXXXXXXXXXXXXXXXXVQMLRDERAALIESIERDVTPDEALETGEELSYLRDGLSKQVLRRLRRGHWVVQAGLDLHGMNRHEAAAKVAEFVALASHRGQRCVRIVHGKGYGSRNRETV 405
D+DF +AVADV PLK Q RDERAAL ES+ + ++ALE+GEEL+YLR+GLS+Q+LRRLRRGHWVVQ+ LDLHGMNR AA V+ F+ + RG RCVRIVHGKG GS+NRE V
Sbjct: 23 DEDFRQAVADVVPLKRERRHALKGPPPAPHAAQRRRDERAALHESLYAPFSIEDALESGEELTYLREGLSRQLLRRLRRGHWVVQSSLDLHGMNRVTAADAVSVFLRASKARGLRCVRIVHGKGLGSKNREPV 155
BLAST of mRNA_P-wetherbeei_contig21410.2.1 vs. uniprot
Match: A0A1F4B324_9PROT (Smr domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4B324_9PROT) HSP 1 Score: 138 bits (347), Expect = 1.130e-38 Identity = 76/133 (57.14%), Postives = 92/133 (69.17%), Query Frame = 1
Query: 7 DDDFAKAVADVQPLKXXXXXXXXXXXXXXXXVQMLRDERAALIESIERDVTPDEALETGEELSYLRDGLSKQVLRRLRRGHWVVQAGLDLHGMNRHEAAAKVAEFVALASHRGQRCVRIVHGKGYGSRNRETV 405
D DF +AVADV PL+ VQ RDE+AAL ES+ ++ D++L++GEEL+YLRDG+ + VLRRLRRGHWVVQA LDLHGMNR AA VA F+ + RG RCVRIVHGKG+GS NRE V
Sbjct: 17 DADFRQAVADVAPLEHRDRHSLKGPPPAPHAVQRRRDEQAALQESLHGPISIDDSLDSGEELTYLRDGMPRTVLRRLRRGHWVVQASLDLHGMNRFAAAEAVAAFLRANAARGLRCVRIVHGKGHGSHNREPV 149
BLAST of mRNA_P-wetherbeei_contig21410.2.1 vs. uniprot
Match: A0A521YLT8_9PROT (DNA mismatch repair protein MutS n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YLT8_9PROT) HSP 1 Score: 136 bits (343), Expect = 2.800e-38 Identity = 74/133 (55.64%), Postives = 93/133 (69.92%), Query Frame = 1
Query: 7 DDDFAKAVADVQPLKXXXXXXXXXXXXXXXXVQMLRDERAALIESIERDVTPDEALETGEELSYLRDGLSKQVLRRLRRGHWVVQAGLDLHGMNRHEAAAKVAEFVALASHRGQRCVRIVHGKGYGSRNRETV 405
D++F +A ADV+PL Q RDERAAL ES+E ++ D+A+E+GEEL +LR+GLS+Q+LR+LRRGHWVV+ LDLHGMNR +AA VA F+ + RG RCVRIVHGKG GSRNRE V
Sbjct: 7 DEEFRRATADVEPLTPQRRMLLRRTPPAPLPEQKRRDERAALAESLEGPLSIDDAIESGEELVFLREGLSRQLLRKLRRGHWVVEDDLDLHGMNRVQAAESVAAFLRGCTRRGLRCVRIVHGKGLGSRNREPV 139
BLAST of mRNA_P-wetherbeei_contig21410.2.1 vs. uniprot
Match: A0A1F4FJ27_9PROT (Smr domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4FJ27_9PROT) HSP 1 Score: 133 bits (335), Expect = 4.690e-37 Identity = 71/133 (53.38%), Postives = 94/133 (70.68%), Query Frame = 1
Query: 7 DDDFAKAVADVQPLKXXXXXXXXXXXXXXXXVQMLRDERAALIESIERDVTPDEALETGEELSYLRDGLSKQVLRRLRRGHWVVQAGLDLHGMNRHEAAAKVAEFVALASHRGQRCVRIVHGKGYGSRNRETV 405
+++F +A+ADV+PL Q RDERAAL+ES++ ++ D+A+E+GEEL +LR+GLS+Q+LR+LR GHWVV+ LDLHGMNR +AA VA F+ + RG RCVRIVHGKG GSRNRE V
Sbjct: 8 EEEFRRAIADVEPLSPPRRMPLPRTRPAPVPEQKHRDERAALVESLQGPLSIDDAIESGEELVFLREGLSRQLLRKLRGGHWVVEDNLDLHGMNRVQAAESVAIFLRGCTRRGLRCVRIVHGKGLGSRNREPV 140
BLAST of mRNA_P-wetherbeei_contig21410.2.1 vs. uniprot
Match: A0A1F4EXS8_9PROT (Smr domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4EXS8_9PROT) HSP 1 Score: 131 bits (330), Expect = 2.600e-36 Identity = 77/132 (58.33%), Postives = 89/132 (67.42%), Query Frame = 1
Query: 10 DDFAKAVADVQPLKXXXXXXXXXXXXXXXXVQMLRDERAALIESIERDVTPDEALETGEELSYLRDGLSKQVLRRLRRGHWVVQAGLDLHGMNRHEAAAKVAEFVALASHRGQRCVRIVHGKGYGSRNRETV 405
+DF +AV DV+PL Q DERAAL ES+ + D+ALETGEEL YLRDG+S+QVLR+LRRG WVVQ DLHGMNR EAA VAEF+ ++ RG RCVRIVHGKG GSRNRE V
Sbjct: 8 EDFRRAVGDVEPLAGARRREPRRAKPEPAPRQSRADERAALAESLAA-WSMDDALETGEELVYLRDGVSRQVLRKLRRGQWVVQESRDLHGMNRLEAAGSVAEFLRDSAKRGLRCVRIVHGKGRGSRNREPV 138 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21410.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21410.2.1 >prot_P-wetherbeei_contig21410.2.1 ID=prot_P-wetherbeei_contig21410.2.1|Name=mRNA_P-wetherbeei_contig21410.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=135bp MADDDFAKAVADVQPLKPARRAAPARPPAPPVPVQMLRDERAALIESIERback to top mRNA from alignment at P-wetherbeei_contig21410:764..1168+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21410.2.1 ID=mRNA_P-wetherbeei_contig21410.2.1|Name=mRNA_P-wetherbeei_contig21410.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=405bp|location=Sequence derived from alignment at P-wetherbeei_contig21410:764..1168+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21410:764..1168+ >mRNA_P-wetherbeei_contig21410.2.1 ID=mRNA_P-wetherbeei_contig21410.2.1|Name=mRNA_P-wetherbeei_contig21410.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=405bp|location=Sequence derived from alignment at P-wetherbeei_contig21410:764..1168+ (Phaeothamnion wetherbeei SAG_119_79)back to top |