mRNA_P-wetherbeei_contig21408.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21408.1.1 vs. uniprot
Match: UPI001903511A (tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE n=1 Tax=Aestuariivirga sp. YIM B02566 TaxID=2800327 RepID=UPI001903511A) HSP 1 Score: 369 bits (947), Expect = 2.920e-122 Identity = 207/396 (52.27%), Postives = 271/396 (68.43%), Query Frame = 1
Query: 4 LPLPRRASIRQLRRPQSREVIDQGLVLWMPGPLSATGEDVAEFHVHGSAAVIEAMFEVFRSVVGVRLAEPGEFTRRAFVNDRMDLVEAEGLADLLQARTEAQRRMAMHHMLGHASSQYEGWRTEMISLLAHLEAAIDFVEEDGVAAAALADIRPKTLNLVARLSRATAEADRAGALRSGVKVVFAGAPNVGKSTLLNLVAAREAAIVSSRPGTTRDVIEVPIVLGGIPVILTDTAGLRAGAGDEIEVIGIQRARSEAAAADIVVWVTSVDVAEDIENAVVPA------LKVLNKSDLPGDAQ---GIHLKVSARTGEGIAELIAQLEKLVAERFSGMEQASVIRIRHRDAVEESIRFLNDSLLHDAGHIELAAECLRRACFSIGRVTGRVDVEDLL 1164
LP PR+A R R P +RE +D GL++ PGP S TGEDVAEFH+HGS AV+ AM +V + G+RLAEPGEFT+RAF NDRMDLV AEG+ DL++ARTE QR+ A+HH LG AS EGWR ++I+ L +EAA+DF +E VA A + D+R + +L++R+ A AEADRA +LR G+KVV AG+PNVGKS+LLN +A REAAIVS+ PGTTRDVIEV + G+PVILTDTAGLR DEIE IG+ R E A+ADIVVW+++ + + + PA L + NKSDL G++ G ++SA+TGEG+A A LE+ V + E A +IR RH+ + L + A H+EL AE LR A + +GR+TGR+DVED+L
Sbjct: 25 LPAPRKAVRRTFRHPDTREALDDGLLVTFPGPHSFTGEDVAEFHLHGSLAVVRAMLDVLSGMAGLRLAEPGEFTKRAFRNDRMDLVAAEGVGDLIRARTERQRKQALHHALGGASQVIEGWRRDLIATLGRVEAAVDFADEADVAQATVEDVRRRLDDLISRMRTALAEADRAASLRDGLKVVLAGSPNVGKSSLLNRLAQREAAIVSAIPGTTRDVIEVTMEFSGVPVILTDTAGLRPETEDEIERIGMDRTSRELASADIVVWISAPE-----DRSGPPAELDSETLWIENKSDLAGNSPEGTGAQYRISAKTGEGMAGFFAALEERVLRMAAHAESAVLIRSRHKQISSSCVENLLRASAQSADHLELMAESLRAAAYDMGRLTGRIDVEDIL 415
BLAST of mRNA_P-wetherbeei_contig21408.1.1 vs. uniprot
Match: A0A6G6WS80_9HYPH (tRNA modification GTPase MnmE n=1 Tax=Nordella sp. HKS 07 TaxID=2712222 RepID=A0A6G6WS80_9HYPH) HSP 1 Score: 358 bits (920), Expect = 5.510e-118 Identity = 206/396 (52.02%), Postives = 268/396 (67.68%), Query Frame = 1
Query: 4 LPLPRRASIRQLRRPQSREVIDQGLVLWMPGPLSATGEDVAEFHVHGSAAVIEAMFEVFRSVVGVRLAEPGEFTRRAFVNDRMDLVEAEGLADLLQARTEAQRRMAMHHMLGHASSQYEGWRTEMISLLAHLEAAIDFVEEDGVAAAALADIRPKTLNLVARLSRATAEADRAGALRSGVKVVFAGAPNVGKSTLLNLVAAREAAIVSSRPGTTRDVIEVPIVLGGIPVILTDTAGLRAGAGDEIEVIGIQRARSEAAAADIVVWVTSVDVAE----DIENAVVPALKVLNKSDLPGDAQGI-----HLKVSARTGEGIAELIAQLEKLVAERFSGMEQASVIRIRHRDAVEESIRFLNDSLLHDAGHIELAAECLRRACFSIGRVTGRVDVEDLL 1164
LP PR+A+ R R PQ+++++D GL+L PGP S TGEDVAEFH+HGS AV+ A+ E + G+RLAEPGEFTRRAF N RMDLV AEG+ DL++ARTE QR+ A+HH LG AS E WR ++I++L +EAA+DF +E VA A +AD+R + +L+ R+ A AEADRA ALR G+KVV AG PNVGKS+LLN +A REAAIVS+ PGTTRDVIEV + G+PVILTDTAGLRA DEIE IG+ R E A ADI+VW++ D D+++ L + NK+DL A GI ++SA+TG G+AE A LE V + + A +IR RH+ + L + A H+EL AE LR A + +GR+TGR+DVED+L
Sbjct: 40 LPAPRQAARRAFRHPQTKDILDDGLLLVFPGPHSFTGEDVAEFHLHGSLAVVRAVLEALGGMAGLRLAEPGEFTRRAFRNGRMDLVAAEGIGDLIRARTERQRKQALHHALGGASQVIETWRRDLIAILGRVEAAVDFSDEADVARATVADVRRRLDDLIGRMRSALAEADRAQALRDGLKVVLAGPPNVGKSSLLNRLAQREAAIVSAIPGTTRDVIEVAMEFSGVPVILTDTAGLRASTEDEIERIGMDRTGRELAGADIIVWMSVPDSPSGPPPDLDSET---LWIENKTDL---AAGIPKSQAQYRISAKTGAGMAEFFAALEDRVLGMAAHADSAVLIRSRHKQISTSCVENLLRASAQSADHLELMAEALRAAAYDMGRLTGRIDVEDVL 429
BLAST of mRNA_P-wetherbeei_contig21408.1.1 vs. uniprot
Match: A0A537P952_9PROT (tRNA modification GTPase MnmE n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537P952_9PROT) HSP 1 Score: 353 bits (907), Expect = 5.060e-116 Identity = 204/394 (51.78%), Postives = 262/394 (66.50%), Query Frame = 1
Query: 4 LPLPRRASIRQLRRPQSREVIDQGLVLWMPGPLSATGEDVAEFHVHGSAAVIEAMFEVFRSVVGVRLAEPGEFTRRAFVNDRMDLVEAEGLADLLQARTEAQRRMAMHHMLGHASSQYEGWRTEMISLLAHLEAAIDFVEEDGVAAAALADIRPKTLNLVARLSRATAEADRAGALRSGVKVVFAGAPNVGKSTLLNLVAAREAAIVSSRPGTTRDVIEVPIVLGGIPVILTDTAGLRAGAGDEIEVIGIQRARSEAAAADIVVWVTSVDVAEDIENAVVPALK-----VLNKSDL-PGDAQ-GIHLKVSARTGEGIAELIAQLEKLVAERFSGMEQASVIRIRHRDAVEESIRFLNDSLLHDAGHIELAAECLRRACFSIGRVTGRVDVEDLL 1164
LP PR A+ R R P ++ V+D G++L PGP S TGEDV EFH+HGS AVI AM + + G+RLAEPGEFTRRAF N RMDL+ AEGL DL+QARTE QR+ A+HH LG AS EGWR +++S+L +EAA+DF +E VA + ++R + +L R+ A AEA+RA +LR GVK+V AG PNVGKS+LLNL+A R+AAIVS+ PGTTRDVIEV + G+PVILTDTAGLR DEIE IG+ R E AAD+V+WV+ A + +P L + NKSDL P D G+ +VSARTG G+AE LE+ V + E A++IR RH+ + + L + A H EL AE LR A +GR+TGR+DVED+L
Sbjct: 40 LPAPRHAARRVFRHPLTQGVLDDGVLLLFPGPKSYTGEDVVEFHLHGSLAVIRAMLDALGGMAGLRLAEPGEFTRRAFRNGRMDLMAAEGLGDLIQARTERQRQQALHHALGGASQVIEGWRRDLVSILGRVEAAVDFADEADVAEQTVDEVRRRLDDLTVRMRGALAEANRAASLREGVKIVLAGPPNVGKSSLLNLLAKRDAAIVSAIPGTTRDVIEVMMEFSGVPVILTDTAGLRGATEDEIERIGMDRTGRELQAADVVIWVS----APGSPSGPLPELDSETLWIENKSDLDPTDRSLGMAHRVSARTGAGMAEFFTALEERVLRHAAHAESATLIRSRHKQITQSCVENLLRASAVSADHPELMAEALRAAAHDVGRLTGRIDVEDIL 429
BLAST of mRNA_P-wetherbeei_contig21408.1.1 vs. uniprot
Match: UPI0018C7906A (tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=UPI0018C7906A) HSP 1 Score: 348 bits (894), Expect = 4.780e-114 Identity = 200/389 (51.41%), Postives = 261/389 (67.10%), Query Frame = 1
Query: 4 LPLPRRASIRQLRRPQSREVIDQGLVLWMPGPLSATGEDVAEFHVHGSAAVIEAMFEVFRSVVGVRLAEPGEFTRRAFVNDRMDLVEAEGLADLLQARTEAQRRMAMHHMLGHASSQYEGWRTEMISLLAHLEAAIDFVEEDGVAAAALADIRPKTLNLVARLSRATAEADRAGALRSGVKVVFAGAPNVGKSTLLNLVAAREAAIVSSRPGTTRDVIEVPIVLGGIPVILTDTAGLRAGAGDEIEVIGIQRARSEAAAADIVVWVTSVDVAEDIENAVVPALKVLNKSDLPG--DAQGIHLKVSARTGEGIAELIAQLEKLVAERFSGMEQASVIRIRHRDAVEESIRFLNDSLLHDAGHIELAAECLRRACFSIGRVTGRVDVEDLL 1164
LP PR AS+R+L+ + +VID+ +VLW GP SATGED+AE HVHG+ A+IE +F +V G+RLA+ GEF+RRAF ND++DLVE EGLADLL A EAQRR+AM LG AS YEGWR ++I LA EAAIDFVEED VA A +P LVA L A + + ALRSG+KVV AGAPNVGKS+ LN +A REAAIVS GTTRD++E ++ G+P+ LTDTAG R+ D IE +GI+RA + + ADI++WV++ D+ + ++ P +++LNK+DLP L VS RTG G+ EL L + +R + +E A V+R RH AV +SIR LN L + EL AE LR+A ++G +TG VDVEDLL
Sbjct: 43 LPQPRVASVRKLKA-RDGQVIDEAMVLWFSGPASATGEDMAELHVHGAPAIIEFIFSELSNVYGLRLADRGEFSRRAFHNDKLDLVEIEGLADLLAATGEAQRRLAMRQFLGEASGAYEGWRRQVIEALALHEAAIDFVEEDDVADRARDLAQPVIKRLVAELEAALSTFSQNAALRSGLKVVIAGAPNVGKSSFLNALARREAAIVSDIAGTTRDIVEAQVMFEGLPLTLTDTAGFRSATDDMIEKMGIERAAAAVSDADILIWVSATDITDSSDSPRTPDIRILNKADLPSIHTRNDAALPVSTRTGAGLDELRLALSSEIKKRMANVEHAVVVRQRHAGAVSDSIRLLNKVLDEPSRPHELIAEDLRKAARALGSITGHVDVEDLL 430
BLAST of mRNA_P-wetherbeei_contig21408.1.1 vs. uniprot
Match: A0A3N5HGU3_9HYPH (tRNA modification GTPase MnmE n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3N5HGU3_9HYPH) HSP 1 Score: 337 bits (863), Expect = 2.270e-109 Identity = 198/390 (50.77%), Postives = 255/390 (65.38%), Query Frame = 1
Query: 7 PLPRRASIRQLRRPQSREVIDQGLVLWMPGPLSATGEDVAEFHVHGSAAVIEAMFEVFRSVVGVRLAEPGEFTRRAFVNDRMDLVEAEGLADLLQARTEAQRRMAMHHMLGHASSQYEGWRTEMISLLAHLEAAIDFVEEDGVAAAALADIRPKTLNLVARLSRATAEADRAGALRSGVKVVFAGAPNVGKSTLLNLVAAREAAIVSSRPGTTRDVIEVPIVLGGIPVILTDTAGLRAGAGDEIEVIGIQRARSEAAAADIVVWVTSVDV--AEDIENAVVPALKVLNKSDL-PGDAQGIHL-KVSARTGEGIAELIAQLEKLVAERFSGMEQASVIRIRHRDAVEESIRFLNDSLLHDAGHIELAAECLRRACFSIGRVTGRVDVEDLL 1164
P PRR ++R LR P E ID+ V+W+P P +ATGED+AEFH+HGS AV +F V GVR+AEPGEFTRR F+N ++DLVEAEGL+DLL ARTEAQRR AMH LG +S+ E WR +I+ LA ++A ++F EE VA A R L+ + RA A A RA +LR G++VVFAGAPN GKS+LLN +A R+ AIVS GTTRD IEV + L G+PV+LTDTAGLR G+ D+IE G+ R R A AD+VVW+ S DV ++ + V P + V KSDL PG G ++S +GEG+ + +L V R E A ++R R AVEESIRFLND+L G +EL + LR A ++ R+TGR+DVED L
Sbjct: 41 PPPRRFAVRTLRSPDGGEAIDKAGVIWLPAPATATGEDMAEFHIHGSEAVASHLFRVLSGFEGVRVAEPGEFTRRGFINGKLDLVEAEGLSDLLAARTEAQRRQAMHQFLGGSSAIIETWRNSLIASLATVDAVVEFSEEGDVAGVADQAWRNDAQALIDHMQRAVARAGRAESLRRGLRVVFAGAPNTGKSSLLNALAQRDVAIVSPLAGTTRDSIEVLLDLDGVPVVLTDTAGLRDGSVDDIERQGMARTRRFAGEADLVVWLWSRDVVGSDVVAEGVRPDMVVETKSDLTPGTTDGRESNRISTLSGEGMVAFVDRLSDFVKARVGLGEAAVIVRERQIQAVEESIRFLNDALRQPTGALELVSADLRGAATALARLTGRIDVEDWL 430
BLAST of mRNA_P-wetherbeei_contig21408.1.1 vs. uniprot
Match: A0A2W2APU5_9HYPH (tRNA modification GTPase MnmE n=2 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2APU5_9HYPH) HSP 1 Score: 327 bits (837), Expect = 2.060e-105 Identity = 191/393 (48.60%), Postives = 251/393 (63.87%), Query Frame = 1
Query: 7 PLPRRASIRQLRRPQSREVIDQGLVLWMPGPLSATGEDVAEFHVHGSAAVIEAMFEVFRSVVGVRLAEPGEFTRRAFVNDRMDLVEAEGLADLLQARTEAQRRMAMHHMLGHASSQYEGWRTEMISLLAHLEAAIDFVEEDGVAAAALADIRPKTLNLVARLSRATAEADRAGALRSGVKVVFAGAPNVGKSTLLNLVAAREAAIVSSRPGTTRDVIEVPIVLGGIPVILTDTAGLRAGAGDEIEVIGIQRARSEAAAADIVVWVTSVDVAEDIENAVVPALKVLNKSDLPGD-------AQGIHLKVSARTGEGIAELIAQLEKLVAERFSGMEQASVIRIRHRDAVEESIRFLNDSLLHDAGHIELAAECLRRACFSIGRVTGRVDVEDLL 1164
P R ++R +R P + E +D+G+VLW P P S TGED AE H+HGSAAV+ A+ + G+R AE GEFTRRAF+N +MDLVEAEGLADLLQART QRR A M G ASS ++ WR +++ + A +EA +DF +E GVA A + I + L +S A ++ A +R GV+VV AG PN GKS+LLN +A REAAIVS PGTTRD IEV + + GIPV LTDTAGLR GA D +E GI+R+R+ A ADIVVWV S DV VP L V NK+DL + L+VS TGEGI+ L+ +L ++ + +E + ++ R AV+ SIR LND+L A H+E+ AE +R + IGR+TGR+ VE+ L
Sbjct: 41 PAARVVALRTIRDPVTGEALDRGMVLWSPAPRSFTGEDCAELHLHGSAAVVGAVLKALNGQPGLRPAEAGEFTRRAFLNGKMDLVEAEGLADLLQARTAGQRRQAFRQMSGMASSVFDAWRRQLLLIRADIEAVVDFADEPGVAEEASSGIDARISILATEMSSALQKSAAAEVVRDGVRVVLAGRPNTGKSSLLNALARREAAIVSEIPGTTRDAIEVSLDINGIPVNLTDTAGLRDGAADVVEEEGIRRSRTHIAEADIVVWVWSSDVPGSRTPDGVPGLVVQNKADLDSGLFRNDPMSDDRPLRVSTLTGEGISGLLQKLTAVLQHHYGDVESSLLVSARQTAAVQRSIRLLNDALAVPAEHLEIKAEQIRSSSEEIGRLTGRIGVEEWL 433
BLAST of mRNA_P-wetherbeei_contig21408.1.1 vs. uniprot
Match: A0A7W6CXT1_9HYPH (tRNA modification GTPase MnmE n=1 Tax=Hansschlegelia beijingensis TaxID=1133344 RepID=A0A7W6CXT1_9HYPH) HSP 1 Score: 320 bits (821), Expect = 6.750e-103 Identity = 199/395 (50.38%), Postives = 250/395 (63.29%), Query Frame = 1
Query: 7 PLPRRASIRQLRRPQSREVIDQGLVLWMPGPLSATGEDVAEFHVHGSAAVIEAMFEVFRSVVGVRLAEPGEFTRRAFVNDRMDLVEAEGLADLLQARTEAQRRMAMHHMLGHASSQYEGWRTEMISLLAHLEAAIDFVEEDGVAAAALADIRPKTLNLVARLSRATAEADRAGALRSGVKVVFAGAPNVGKSTLLNLVAAREAAIVSSRPGTTRDVIEVPIVLGGIPVILTDTAGLRAGAGDEIEVIGIQRARSEAAAADIVVWVTSVDVAEDIENAVVPAL-------KVLNKSDLPGDAQGI--HLKVSARTGEGIAELIAQLEKLVAERFSGMEQASVIRIRHRDAVEESIRFLNDSLLHDAGHIELAAECLRRACFSIGRVTGRVDVEDLL 1164
P PRRAS R R P EVID+GL LW+PGP SATGED+AE H+HG AV+ A E SV GVR+AEPGEFTRRAF+ RMDL E EGLADL++A TEAQRR A+ G S++ E WR +I +A LEAAIDF +ED V A + + L LS A A+ RA LR G +V G PN GKS+LLNL+A REAAIV+ PGTTRDVIE + LGG+PVI+ DTAGLR A D E G++R+ +A AAD+V+W+ ED + P++ +V NK+DL G +G HL +S R+G G+ ELIA L + SG E + R RHRDA+ ++ L + L H ELAAE LRRA +GR+TG+V VED+L
Sbjct: 58 PAPRRASYRTFRSPTGGEVIDRGLALWLPGPGSATGEDIAELHIHGGRAVVAAALEAALSVPGVRMAEPGEFTRRAFLAGRMDLAEVEGLADLIEAETEAQRRQALRQSSGELSARVEAWRERLIGAMALLEAAIDFSDEDDVPAGLRERAQEEIGRLAQDLSAALADT-RAERLRDGFRVALVGPPNAGKSSLLNLLARREAAIVADAPGTTRDVIETHLDLGGVPVIVADTAGLRETA-DAAEQEGVRRSTLQARAADLVIWL------EDAADPTQPSIEASSALWRVANKADLAGAKKGEADHL-ISVRSGLGVEELIAALTEAARAGASG-EAIGLTRARHRDALSAAVAALRECLDHPLPE-ELAAELLRRAAGELGRITGKVGVEDVL 441
BLAST of mRNA_P-wetherbeei_contig21408.1.1 vs. uniprot
Match: UPI0010C9952E (tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE n=1 Tax=Rhodoligotrophos defluvii TaxID=2561934 RepID=UPI0010C9952E) HSP 1 Score: 312 bits (799), Expect = 9.280e-100 Identity = 188/390 (48.21%), Postives = 247/390 (63.33%), Query Frame = 1
Query: 4 LPLPRRASIRQLRRPQSREVIDQGLVLWMPGPLSATGEDVAEFHVHGSAAVIEAMFEVFRSVVGVRLAEPGEFTRRAFVNDRMDLVEAEGLADLLQARTEAQRRMAMHHMLGHASSQYEGWRTEMISLLAHLEAAIDFVEEDGVAAAALADIRPKTLNLVARLSRATAEADRAGALRSGVKVVFAGAPNVGKSTLLNLVAAREAAIVSSRPGTTRDVIEVPIVLGGIPVILTDTAGLRAGAGDEIEVIGIQRARSEAAAADIVVWVTSVDVAEDIENAVVPAL-KVLNKSDL-PGDAQGIHLKVSARTGEGIAELIAQLEKLVAERFSGMEQASVI-RIRHRDAVEESIRFLNDSLLHDAGHIELAAECLRRACFSIGRVTGRVDVEDLL 1164
LP PRRA +R L P VID+ +V+W+PGP + +GED+ E HVHG AV+ A+F R G+R AE GEFTRRA N RM LV+AEGLADL+ A TEAQR+ A+ G YEGWR ++++LLAHLEA IDFV+E+GV AD+R ++ L +S + LR G+ VV AG PN GKS+LLN +A RE AIVS RPGTTRD+IEV + LGG PV+L DTAGLR A DEIE G++RAR A A +V+WVTS D E AL +V+NKSDL PG+ + +SA+TG G+ L+ L V F+ ++ ++ R RHR A+ + L + A EL AE LRRA + +G++ GR+D+ED+L
Sbjct: 41 LPRPRRAVLRALNDPDGGGVIDRAMVIWLPGPHTFSGEDMLELHVHGGPAVVAALFRALRHFPGLRPAERGEFTRRAVENGRMGLVDAEGLADLIAADTEAQRKQALRQASGGLDEIYEGWRNQLLALLAHLEAHIDFVDEEGVPLEVAADVRARSSALAREISSFLTDNRVGERLREGLTVVIAGPPNAGKSSLLNRLARREVAIVSDRPGTTRDLIEVHLDLGGYPVVLVDTAGLREAAADEIEDEGMRRARKRAGEAALVIWVTSPDADGRPEAPFDSALLRVVNKSDLIPGENVLDAISISAKTGSGLDALVEALTARVQALFAETQERPLLTRERHRVALSKCCDHLLAAAATPAD--ELVAEDLRRAAWYLGKLVGRIDIEDIL 428
BLAST of mRNA_P-wetherbeei_contig21408.1.1 vs. uniprot
Match: A0A7S8C4Q2_9HYPH (tRNA modification GTPase MnmE n=1 Tax=Kaustia mangrovi TaxID=2593653 RepID=A0A7S8C4Q2_9HYPH) HSP 1 Score: 310 bits (795), Expect = 6.010e-99 Identity = 190/402 (47.26%), Postives = 244/402 (60.70%), Query Frame = 1
Query: 7 PLPRRASIRQLRRPQSREVIDQGLVLWMPGPLSATGEDVAEFHVHGSAAVIEAMFEVFRSVVGVRLAEPGEFTRRAFVNDRMDLVEAEGLADLLQARTEAQRRMAMHHMLGHASSQYEGWRTEMISLLAHLEAAIDFVEEDGVAAAALADIRPKTLNLVARLSRATAEADRAGALRSGVKVVFAGAPNVGKSTLLNLVAAREAAIVSSRPGTTRDVIEVPIVLGGIPVILTDTAGLRAGAGDEIEVIGIQRARSEAAAADIVVWVTSV-DVAEDIENAVVPA------LKVLNKSDLPGDAQGI---------HLKVSARTGEGIAELIAQLEKLVAERFSGMEQASVIRIRHRDAVEESIRFLNDSLLHDAGHIELAAECLRRACFSIGRVTGRVDVEDLL 1164
P RR S+R + RP S E +D+GLVLW+PGP S TGED+AEFHVHG AVI + V G+R AE GEFTRRAF N R+DL E EG+AD++ A TEAQRR A+ M G + Y+ WR ++++++A LEA IDF +E V A A I + +L + + R LR G++VV AG PNVGKS+LLN +A R+AAIV+ R GTTRDVIEV + L G PVIL DTAGLR GDEIE G+ R R+ AD+VVWVTS D+ E + A+ A L V+NKSDL D + + +SA TG G+ LIA+L + E + R RHR A+ E + L+ + EL AE LRRA ++GR+ GRVDVEDLL
Sbjct: 43 PAARRVSLRTIVRPGSGEPLDRGLVLWLPGPESFTGEDMAEFHVHGGPAVISGVLGAIGEVGGMRPAEAGEFTRRAFENGRLDLTEVEGIADMIDAETEAQRRQALRQMEGALGTLYDRWRADLVAMMAELEAVIDFPDEGDVPAELAAGIGRRAADLADEMRAHMDDGRRGERLRDGIQVVIAGRPNVGKSSLLNQLARRDAAIVAERAGTTRDVIEVHLDLAGYPVILVDTAGLREETGDEIEREGMARTRNRLDTADLVVWVTSAPDMEEGSDGALSDAPVDSETLWVVNKSDLAEDLSALLKSCPGMTRAIPISALTGAGLDGLIAELARRAQALAGEGEHVVMTRARHRAALGECLEHLDRVVSGTISEPELVAEDLRRAAHALGRIVGRVDVEDLL 444
BLAST of mRNA_P-wetherbeei_contig21408.1.1 vs. uniprot
Match: UPI0015E73499 (tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE n=1 Tax=Hyphomicrobium methylovorum TaxID=84 RepID=UPI0015E73499) HSP 1 Score: 310 bits (793), Expect = 6.980e-99 Identity = 178/391 (45.52%), Postives = 249/391 (63.68%), Query Frame = 1
Query: 1 SLPLPRRASIRQLRRPQSREVIDQGLVLWMPGPLSATGEDVAEFHVHGSAAVIEAMFEVFRSVVGVRLAEPGEFTRRAFVNDRMDLVEAEGLADLLQARTEAQRRMAMHHMLGHASSQYEGWRTEMISLLAHLEAAIDFVEEDGVAAAALADIRPKTLNLVARLSRATAEADRAGALRSGVKVVFAGAPNVGKSTLLNLVAAREAAIVSSRPGTTRDVIEVPIVLGGIPVILTDTAGLRAGAGDEIEVIGIQRARSEAAAADIVVWVTSV---DVAEDIENAVVPALKVLNKSDLPGDAQGIHLKVSARTGEGIAELIAQLEKLVAERFSGMEQASVIRIRHRDAVEESIRFLNDSLLHDAGHIELAAECLRRACFSIGRVTGRVDVEDLL 1164
S PLPR + R +R P++ E+ID +VLW S TGEDV EF VHGS AVI AMF + + G RLAEPGEF RRAF N ++DL + EGLADL+ A TE+QRR A+ G S YE WR+ +I + +EAAIDF +E VAA+A++D R + L ++R + R LR G +V GAPN GKS+LLN +A R+AAIVS+ GTTRDVIEV + LGG+PVI++DTAG+R A D IE GI+R+ + A AD+VVW++ ++ + I +L + +K+DL ++ G L+VSA TGEG+ LI ++ + + ++ R+RHR +E ++ + L + +EL AE +RRA ++GR+TGRVDVED+L
Sbjct: 39 SPPLPRYGAFRTIRHPRTHEIIDGAVVLWFEARSSETGEDVVEFQVHGSRAVITAMFAALKEIDGCRLAEPGEFARRAFENGKLDLAQVEGLADLIDAETESQRRQAVAQTAGALSKLYESWRSRLIEIAGLVEAAIDFSDEGDVAASAVSDARQRASVLSDEIARHLDDGHRGEILREGFRVALLGAPNAGKSSLLNALARRDAAIVSAEAGTTRDVIEVRLDLGGLPVIVSDTAGIREAASD-IEREGIRRSLAVAREADLVVWLSETCDSNIPQGISRET--SLAICSKADLARESNGSDLRVSALTGEGLDRLIGEISRRAHTAVGASSEPALTRVRHRQNLEAALESIRAFLGGNVEAVELRAEDVRRASHALGRITGRVDVEDVL 426 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21408.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21408.1.1 >prot_P-wetherbeei_contig21408.1.1 ID=prot_P-wetherbeei_contig21408.1.1|Name=mRNA_P-wetherbeei_contig21408.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=388bp SLPLPRRASIRQLRRPQSREVIDQGLVLWMPGPLSATGEDVAEFHVHGSAback to top mRNA from alignment at P-wetherbeei_contig21408:6..1169- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21408.1.1 ID=mRNA_P-wetherbeei_contig21408.1.1|Name=mRNA_P-wetherbeei_contig21408.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1164bp|location=Sequence derived from alignment at P-wetherbeei_contig21408:6..1169- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21408:6..1169- >mRNA_P-wetherbeei_contig21408.1.1 ID=mRNA_P-wetherbeei_contig21408.1.1|Name=mRNA_P-wetherbeei_contig21408.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1164bp|location=Sequence derived from alignment at P-wetherbeei_contig21408:6..1169- (Phaeothamnion wetherbeei SAG_119_79)back to top |