mRNA_P-wetherbeei_contig2139.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig2139.1.1 vs. uniprot
Match: A0A835Z6B9_9STRA (Putative phytol kinase, chloroplast, carboxyterminal half n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6B9_9STRA) HSP 1 Score: 267 bits (682), Expect = 9.750e-87 Identity = 143/235 (60.85%), Postives = 170/235 (72.34%), Query Frame = 1
Query: 10 CIAAAVGWVHLWTTLHRRGAISSKVSRKIIHCGSGPLFMLLWPLFSPLPTARYVAAIVPFLQAVRLTLAGL-----GRGG-----NDLAAAVAREGDAREALQGPLLYVLVLTAGTVLEWRTSMVGLLAICQMAAGDGLADLVGRRFGGVKWWFSKDKSYVGSLAFMVGGFAVSMALVAWFHAAGCLALSPAAAALRIAAVSLACALVEVAPVAG-DDNVSVPVAAAVLSRLLFP 681
CI + WV LW+ L ++G + S VSRK++HC SGPLF+L WP FSP RY+AA VP LQA RLTLAG G GG N L V+R G A EA+ GPLLYVLVL T+LEWR S+VG++A+CQMAAGDGLADLVGR G KWWFS+ KSYVGSLAF+ GGF VS+ALV W HA GC+A+S AAALR+ +S CA+VE + G DDNVSVPVAAAVL+R+LFP
Sbjct: 45 CIVLSTVWVQLWSVLVQQGKLPSTVSRKVVHCSSGPLFLLFWPFFSP--AGRYMAAAVPLLQATRLTLAGFAAAKSGSGGGFRKQNPLVQVVSRSGSASEAVGGPLLYVLVLAVATILEWRASLVGVMAVCQMAAGDGLADLVGRHVKGKKWWFSEHKSYVGSLAFVAGGFVVSLALVGWLHALGCIAVSAQAAALRVLGISAVCAVVEAVAMDGVDDNVSVPVAAAVLTRVLFP 277
BLAST of mRNA_P-wetherbeei_contig2139.1.1 vs. uniprot
Match: A0A7S2SS51_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS51_9STRA) HSP 1 Score: 208 bits (529), Expect = 3.510e-63 Identity = 116/225 (51.56%), Postives = 155/225 (68.89%), Query Frame = 1
Query: 13 IAAAVGWVHLWTTLHRRGAISSKVSRKIIHCGSGPLFMLLWPLFSPLPTARYVAAIVPFLQAVRLTLAGLGRGGNDLAAAVAREGDAREALQGPLLYVLVLTAGTVLEWRTSMVGLLAICQMAAGDGLADLVGRRFGGVKWWFSKDKSYVGSLAFMVGGFAVSMALVAWFHAAGCL---ALSPAAAALRIAAVSLACALVEVAPVAGDDNVSVPVAAAVLSRLLF 678
+AAA W+ +WTTL + I K+SRK++H GS PLF+L WP F+ AR+VAA VP L RL LA G+ +L AV+R GDA+EA+ GP LYV++L T WR+S++G++A+ QMAAGDGLAD+VGR+ GG +W FS K+Y GSL F++GGF VS+ LV W C+ L A A+R+AAVS+A ALVE+ P+ GDDNV+VP+ AAV + L F
Sbjct: 77 LAAATAWLKVWTTLAGKDLIDPKLSRKVVHSGSAPLFILTWPFFTSGAEARFVAAGVPLLMLSRLLLASFGKQ-PELLKAVSRSGDAKEAVGGPFLYVVMLLVFTTAYWRSSIIGVVALAQMAAGDGLADIVGRKVGGARWPFSDRKTYAGSLGFVLGGFTVSLGLVYWLATFSCVDLGGLGLADVAVRLAAVSVASALVELVPL-GDDNVTVPLTAAVFTALAF 299
BLAST of mRNA_P-wetherbeei_contig2139.1.1 vs. uniprot
Match: A0A6H5KTI6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTI6_9PHAE) HSP 1 Score: 206 bits (524), Expect = 1.060e-61 Identity = 117/230 (50.87%), Postives = 150/230 (65.22%), Query Frame = 1
Query: 16 AAAVGWVHLWTTLHRRGAISSKVSRKIIHCGSGPLFMLLWPLFSPLPTARYVAAIVPFLQAVRLTLAGLG-------RGGNDLAAAVAREGDAREALQGPLLYVLVLTAGTVLEWRTSMVGLLAICQMAAGDGLADLVGRRFGGVKWWFSKDKSYVGSLAFMVGGFAVSMALVAWFHAAGCLALSPAAAALRIAAVSLACALVEVAP--VAGDDNVSVPVAAAVLSRLLF 678
AA++ WV LWT L RR + +VSRK++H + PLF++LWP F+ P AR AA VP +QAVRL AGL N+L A++R G A E L GPL Y L + TV+EWRTS+VGL+A+ QMA GDG+ADLVGR+ G KW +KS GS AF+ G F S+A++ WF G L+++P AA R AA+S A A VE+ P + GDDN+SVPV A VL RLLF
Sbjct: 139 AASIVWVKLWTGLARRDKMKPQVSRKVVHTTAAPLFVILWPFFTNRPCARLFAAAVPMVQAVRLAAAGLSGDPENNDSSSNELVKAISRSGKASETLDGPLKYSLAIVLITVVEWRTSVVGLIAMMQMAVGDGMADLVGRQLGKHKWRKGGEKSVEGSAAFVSGSFLASVAMIQWFRHFGLLSVTPTEAAARAAAISFASAAVELFPPRLVGDDNISVPVTALVLGRLLF 368
BLAST of mRNA_P-wetherbeei_contig2139.1.1 vs. uniprot
Match: W7TNW7_9STRA (Phosphatidate cytidylyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNW7_9STRA) HSP 1 Score: 204 bits (519), Expect = 2.950e-61 Identity = 119/241 (49.38%), Postives = 156/241 (64.73%), Query Frame = 1
Query: 13 IAAAVGWVHLWTTLHRRGAISSKVSRKIIHCGSGPLFMLLWPLFSPLPTARYVAAIVPFLQAVRLTLAGLGRGG----ND---------------LAAAVAREGDAREALQGPLLYVLVLTAGTVLEWRTSMVGLLAICQMAAGDGLADLVGRRFGGVKWWFSKDKSYVGSLAFMVGGFAVSMALVAWFHAAGCLALSPAAAALRIAAVSLACALVEVAPVAGDDNVSVPVAAAVLSRLLF 678
+A+AV W+ LWT+L GAI SK SRK+IHCGSGPLF+L WP FS TAR AA VP LQ V + +GL + ND L AA++R G+ E L+GPL+YV++L TV+ WR S+VGL+A+ QMAAGDG+AD+VGRR+G KW FS KSY GS AF + GF VS+AL+AWF+ G + A A ++A +S+ CA VE+ P GDDN+ VP+ A+ L+ L
Sbjct: 106 MASAV-WLKLWTSLAISGAIDSKDSRKLIHCGSGPLFLLCWPFFSAEGTARLFAAGVPLLQIVAMIASGLAKAPSPAKNDSGIRAGESAMGKPSGLVAAISRSGNPAEVLRGPLIYVVILLLATVVFWRESVVGLVAVAQMAAGDGMADIVGRRWGAQKWSFSSTKSYAGSSAFALSGFVVSVALIAWFNFWGLVPALTAGVACKVALISILCAAVELVPW-GDDNIFVPMVASALASWLL 344
BLAST of mRNA_P-wetherbeei_contig2139.1.1 vs. uniprot
Match: A0A8J6C688_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C688_DIALT) HSP 1 Score: 199 bits (506), Expect = 9.360e-60 Identity = 120/239 (50.21%), Postives = 150/239 (62.76%), Query Frame = 1
Query: 1 SGGCIAAAVGWVHLWTTLHRRGAISSKVSRKIIHCGSGPLFMLLWPLFSPLPTARYVAAIVPFLQAVRLTLAGL--------GRGGND---LAAAVAREGDAREALQGPLLYVLVLTAGTVLEWRTSMVGLLAICQMAAGDGLADLVGRRFGGV-KWWFSKDKSYVGSLAFMVGGFAVSMALVAWFHAAGCLALSPAAAALRIAAVSLACALVEVAPV-AGDDNVSVPVAAAVLSRLLF 678
+G C A+ W+ +WT L GA+SS +SRK++H GS PLF+L WPLFS P AR VAAIVP L A+RL AGL G GG L AAV+R G+ E L+GP +YVLVL TVL WR S VG++AI QMA GDG+AD+VGRR GG +W F+ KS GS+AF+ G S+ L+AW A G LA LR+ +S+ACA VE+ P DDNVSVP+ A L+ L
Sbjct: 66 AGACAIGALAWIRVWTELAASGAVSSTLSRKMVHVGSAPLFVLAWPLFSAAPWARAVAAIVPALNALRLLRAGLPASRGGGNGNGGGSPDALVAAVSRSGERSEVLRGPFIYVLVLLGATVLCWRASAVGVVAIAQMAVGDGVADIVGRRLGGSNRWPFNPSKSVAGSVAFVAGATGASIGLLAWLGAWGVLAPLAPDTPLRLLLISVACAAVELLPTDVLDDNVSVPLVGAGLALALL 304
BLAST of mRNA_P-wetherbeei_contig2139.1.1 vs. uniprot
Match: A0A7S2DMS8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DMS8_9STRA) HSP 1 Score: 195 bits (495), Expect = 3.470e-58 Identity = 112/229 (48.91%), Postives = 143/229 (62.45%), Query Frame = 1
Query: 13 IAAAVGWVHLWTTLHRRGAISSKVSRKIIHCGSGPLFMLLWPLFSPLPTARYVAAIVPFLQAVRLTLAGLGRGGNDLAAAVAREGDAREALQGPLLYVLVLTAGTVLEWRTSMVGLLAICQMAAGDGLADLVGRRFGGVKWWFSKDKSYVGSLAFMVGGFAVSMALVAWFHAAGCLAL-------SPAAAALRIAAVSLACALVEVAPVAGDDNVSVPVAAAVLSRLLF 678
+ AA W+ T++ RG + +SRKIIHCGS PLF+L WPLFS TAR+ A+ +P +R+ A G DL AA++R G A EAL GP +Y L L A T+ WRTS++ ++AI QMAAGDGLAD++GRRFG W FS KS GS AF+VGGF SMAL+ W + L+L S AA A RI +SLACA +E+ + DDN SVPV A VL +
Sbjct: 70 LGAATIWLKTVTSVATRGLVDPTISRKIIHCGSAPLFLLTWPLFSSSLTARFFASAIPIFSLLRIIKASQGEKERDLLAAISRSGGAHEALGGPFIYSLNLLAATLFGWRTSLISVVAIAQMAAGDGLADIIGRRFGASSWTFSPTKSMEGSAAFVVGGFVCSMALIGWLSSFKVLSLGYGSGWLSFAALAPRILGISLACAAIELVTLV-DDNYSVPVLALVLGHIFL 297
BLAST of mRNA_P-wetherbeei_contig2139.1.1 vs. uniprot
Match: C1MRG0_MICPC (Predicted protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MRG0_MICPC) HSP 1 Score: 189 bits (481), Expect = 9.690e-57 Identity = 113/229 (49.34%), Postives = 144/229 (62.88%), Query Frame = 1
Query: 13 IAAAVG---WVHLWTTLHRRGAISSKVSRKIIHCGSGPLFMLLWPLFSPLPTARYVAAIVPFLQAVRLTLAGLGRGGN-DLAAAVAREGDAREALQGPLLYVLVLTAGTVLEWRTSMVGLLAICQMAAGDGLADLVGRRFG-GVKWWFSKDKSYVGSLAFMVGGFAVSMALVAWFHAAGCLALSPAAAALRIAAVSLACALVEVAPVAG--DDNVSVPVAAAVLSRLLF 678
+AAAVG WV L+ L + K+SRK+IH GP F+LLWPLFS P+A+Y AA VP LQ +RL G+G N D AV+REGD E L+GPL Y VL T + WR S G+ A+ M GDGLAD+VGRR G G F+ DKSY GS A +GGF +S+AL A+FHA G +++ P +AA R+A ++ AC +E P DDN+SVPV A VL +LF
Sbjct: 20 LAAAVGAYLWVKLFDVLASNDVLERKLSRKLIHTSCGPFFVLLWPLFSASPSAKYFAAAVPVLQGIRLMAIGVGAIENEDAIRAVSREGDRTELLRGPLYYTAVLVVCTAVFWRGSPSGIAALSLMCGGDGLADIVGRRLGKGNPLPFNADKSYAGSAAMFLGGFGLSLALCAFFHALGYMSVDPGSAAGRLALIAAACTAIEALPAGSFLDDNISVPVVAVVLGGVLF 248
BLAST of mRNA_P-wetherbeei_contig2139.1.1 vs. uniprot
Match: A0A7S4B5N8_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B5N8_CHRCT) HSP 1 Score: 192 bits (489), Expect = 1.220e-56 Identity = 115/228 (50.44%), Postives = 141/228 (61.84%), Query Frame = 1
Query: 10 CIAAAVGWVHLWTTLHRRGAISSKVSRKIIHCGSGPLFMLLWPLFSPLPTARYVAAIVPFLQAVRLTLAGLGRG---GND--LAAAVAREGDAREALQGPLLYVLVLTAGTVLEWRTSMVGLLAICQMAAGDGLADLVGRRFGGVKWWFSKDKSYVGSLAFMVGGFAVSMALVAWFHAAGCLALSPAAAALRIAAVSLACALVEVAPVAGDDNVSVPVAAAVLSRLLF 678
C +A WV +WT L G I S VSRK++H GS PL ML WPLFS P+ A+ VP LQA RL AG G+D L AV+R G EAL+GPL+Y LVL TV WR S+V A+CQMA GDGLAD+ GRRFGG KW F+ KSYVGS AF + F S V++FHA G + + A + A+S+ CA VE+ PVA DDN++VP A +LS LL
Sbjct: 127 CTVSAAAWVWIWTGLAASGKIPSVVSRKVVHAGSAPLLMLCWPLFSEAPSGLVAASFVPLLQAFRLFRAGTAADDDTGSDKGLIQAVSRTGARAEALKGPLIYTLVLLCATVFGWR-SIVASTALCQMAVGDGLADIFGRRFGGTKWPFAPSKSYVGSAAFALSAFLASAGFVSFFHACGYTSATALACWPSLLAISILCAAVELVPVA-DDNLTVPFTAMLLSILLL 352
BLAST of mRNA_P-wetherbeei_contig2139.1.1 vs. uniprot
Match: A0A7S3NIY1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIY1_9STRA) HSP 1 Score: 189 bits (480), Expect = 5.270e-56 Identity = 108/230 (46.96%), Postives = 141/230 (61.30%), Query Frame = 1
Query: 7 GCIAAAVGWVHLWTTLHRRGAISSKVSRKIIHCGSGPLFMLLWPLFSPLPTARYVAAIVPFLQAVRLTLAGLG---RGGNDLAAAVAREGDAREALQGPLLYVLVLTAGTVLEWRTSMVGLLAICQMAAGDGLADLVGRRFGGVKWWFSKDKSYVGSLAFMVGGFAVSMALVAWFHAAGCLALSP---AAAALRIAAVSLACALVEVAPVAGDDNVSVPVAAAVLSRLLF 678
G A W+ +WTTL G I+S++SRKIIHCGS PLF+ +WP +S P+AR +AAIVP L RL AG+ +G +L AV+R GD +E L+GPL+Y +VL T+L WR S ++AI QMA GDG+AD+VGRRFG W + +KSY GSLAF+ G + L+ WF CLA P RI +S+ CALVE+ P DDN+SVP A L +
Sbjct: 66 GAAGGAAMWLKIWTTLASNGVINSRLSRKIIHCGSAPLFLFVWPFYSDAPSARLIAAIVPLLNLGRLLAAGVNANAKGPQELVTAVSRSGDPKEVLKGPLIYCIVLVFATLL-WRNSTAAVVAISQMAVGDGVADIVGRRFGQSAKWPNSEKSYAGSLAFVFGASIATFVLLRWFEFMACLAPLPFDTVTLFARIFLISIVCALVELIP-GLDDNISVPFVGAFLGTYVI 293
BLAST of mRNA_P-wetherbeei_contig2139.1.1 vs. uniprot
Match: A0A8J2WKZ4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WKZ4_9STRA) HSP 1 Score: 180 bits (457), Expect = 1.110e-52 Identity = 102/223 (45.74%), Postives = 140/223 (62.78%), Query Frame = 1
Query: 7 GCIAAAVGWVHLWTTLHRRGAISSKVSRKIIHCGSGPLFMLLWPLFSPLPTARYVAAIVPFLQAVRLTLAGLGRGGNDLAAAVAREGDAREALQGPLLYVLVLTAGTVLEWRTSMVGLLAICQMAAGDGLADLVGRRFGGVKWWFSKDKSYVGSLAFMVGGFAVSMALVAWFHAAGCLALSPAAAALRIAAVSLACALVEVAPVAGDDNVSVPVAAAVLSRLL 675
G A AV W+ +WTTL RG I +K++RKI+HCGSGPL++L+W +S AR +AA+VP L V+L A + N+L+ A++R GD E L GP +Y VL +L +RT ++A+ QMA GDGLAD++GRRFG KW+ + +KSY GSLAF++G SM L+ W LA + A+S+ CALVEV DDNVSVP+ A+L+ L
Sbjct: 71 GAAAGAVAWIKVWTTLAERGVIDAKLARKIVHCGSGPLYLLVWRFYSDAALARVIAALVPALNIVKLQKAA--QDDNELSRAISRSGDPSEVLGGPYVYTWVLLLAALLAFRTPA-AIVAVAQMAVGDGLADIIGRRFGRQKWFCNPEKSYAGSLAFVLGATVASMGLLRWLAFPAPLA--------PLVAISVICALVEVLLTDVDDNVSVPLVGALLALTL 282 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2139.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig2139.1.1 >prot_P-wetherbeei_contig2139.1.1 ID=prot_P-wetherbeei_contig2139.1.1|Name=mRNA_P-wetherbeei_contig2139.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=230bp SGGCIAAAVGWVHLWTTLHRRGAISSKVSRKIIHCGSGPLFMLLWPLFSPback to top mRNA from alignment at P-wetherbeei_contig2139:2217..2906+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig2139.1.1 ID=mRNA_P-wetherbeei_contig2139.1.1|Name=mRNA_P-wetherbeei_contig2139.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=690bp|location=Sequence derived from alignment at P-wetherbeei_contig2139:2217..2906+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig2139:2217..2906+ >mRNA_P-wetherbeei_contig2139.1.1 ID=mRNA_P-wetherbeei_contig2139.1.1|Name=mRNA_P-wetherbeei_contig2139.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=690bp|location=Sequence derived from alignment at P-wetherbeei_contig2139:2217..2906+ (Phaeothamnion wetherbeei SAG_119_79)back to top |