mRNA_P-wetherbeei_contig21383.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21383.1.1 vs. uniprot
Match: I0Z9S6_COCSC (Methenyltetrahydrofolate cyclohydrolase n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z9S6_COCSC) HSP 1 Score: 93.6 bits (231), Expect = 4.140e-19 Identity = 44/98 (44.90%), Postives = 70/98 (71.43%), Query Frame = 1
Query: 253 PRAMLVNGRAMAIDILRDVRNEVEYLRDAYGRVPGLAVIVVGDRKDSAKYVSMKRQVATSVGFHSFASELPANVHHEDVLKVIDQYNRDDR*VGGALI 546
P A ++NG+A+A I +++ +EV+ L++ YG+VPGLAV++VG + DSA YV MKR+ +G SF+++LP +V ED+LKV+ YN ++ V G L+
Sbjct: 11 PTAQIINGKAIADSIRKEIADEVKALQEKYGKVPGLAVVLVGTKGDSATYVRMKRKACADLGIQSFSTDLPGDVSEEDLLKVVADYNANEE-VHGILV 107
BLAST of mRNA_P-wetherbeei_contig21383.1.1 vs. uniprot
Match: A0A3M1HQ69_9CHLR (Methenyltetrahydrofolate cyclohydrolase (Fragment) n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1HQ69_9CHLR) HSP 1 Score: 89.4 bits (220), Expect = 5.280e-19 Identity = 45/96 (46.88%), Postives = 65/96 (67.71%), Query Frame = 1
Query: 259 AMLVNGRAMAIDILRDVRNEVEYLRDAYGRVPGLAVIVVGDRKDSAKYVSMKRQVATSVGFHSFASELPANVHHEDVLKVIDQYNRDDR*VGGALI 546
A +++G+A+A I +++ EVE ++ YGRVPGLA ++VGDR DSA YV MK++ VG SF ELPA++ ED+LKV+ N D+ V G L+
Sbjct: 3 AQIIDGKAIAATIRGEIKQEVEEMKARYGRVPGLAAVLVGDRPDSATYVRMKKKACAEVGITSFGYELPADISQEDLLKVVRDLN-DNPDVHGILV 97
BLAST of mRNA_P-wetherbeei_contig21383.1.1 vs. uniprot
Match: A0A7J7PX70_9CHLO (Methenyltetrahydrofolate cyclohydrolase n=2 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PX70_9CHLO) HSP 1 Score: 90.5 bits (223), Expect = 7.470e-18 Identity = 45/97 (46.39%), Postives = 67/97 (69.07%), Query Frame = 1
Query: 256 RAMLVNGRAMAIDILRDVRNEVEYLRDAYGRVPGLAVIVVGDRKDSAKYVSMKRQVATSVGFHSFASELPANVHHEDVLKVIDQYNRDDR*VGGALI 546
+A L++G+ +A DI +++ EV+ L+ A GR PGLAV++VG RKDS YV K++ VGF SF ++LP +V E++LKV+ QYN D + V G L+
Sbjct: 47 KASLIDGKKIAEDIRKEIAAEVQQLQKAAGRAPGLAVVLVGARKDSETYVRSKKKACAEVGFESFGTDLPEDVSQEELLKVVAQYNADPK-VDGILV 142
BLAST of mRNA_P-wetherbeei_contig21383.1.1 vs. uniprot
Match: W1P2Q8_AMBTC (Methenyltetrahydrofolate cyclohydrolase n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1P2Q8_AMBTC) HSP 1 Score: 89.4 bits (220), Expect = 1.200e-17 Identity = 40/87 (45.98%), Postives = 62/87 (71.26%), Query Frame = 1
Query: 259 AMLVNGRAMAIDILRDVRNEVEYLRDAYGRVPGLAVIVVGDRKDSAKYVSMKRQVATSVGFHSFASELPANVHHEDVLKVIDQYNRD 519
A L++G+A+A I +++ +EV YL YG+VPGLAV++VG+RKDS YV MKR+ VG SF ++LP +V E+V++ + ++N D
Sbjct: 9 ANLIDGKAIANTIRKEIASEVSYLSQKYGKVPGLAVVIVGNRKDSQSYVKMKRKACAEVGIKSFDTDLPEDVSEEEVIRKVHEFNAD 95
BLAST of mRNA_P-wetherbeei_contig21383.1.1 vs. uniprot
Match: D8TJT9_VOLCA (Methenyltetrahydrofolate cyclohydrolase n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TJT9_VOLCA) HSP 1 Score: 89.4 bits (220), Expect = 2.920e-17 Identity = 44/98 (44.90%), Postives = 65/98 (66.33%), Query Frame = 1
Query: 253 PRAMLVNGRAMAIDILRDVRNEVEYLRDAYGRVPGLAVIVVGDRKDSAKYVSMKRQVATSVGFHSFASELPANVHHEDVLKVIDQYNRDDR*VGGALI 546
P A L++G+A+A I ++ EV ++ YG PGLAV++VG RKDS YV K++ VGF S+ ++LPA+V E++LKV++ YN D R V G L+
Sbjct: 83 PHARLIDGKAIADTIRSEIAAEVAAMKQQYGLTPGLAVVLVGSRKDSETYVRSKKKACAEVGFDSYGTDLPADVSEEELLKVVESYNADPR-VHGILV 179
BLAST of mRNA_P-wetherbeei_contig21383.1.1 vs. uniprot
Match: A0A7S2B626_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7S2B626_9CHLO) HSP 1 Score: 83.6 bits (205), Expect = 1.100e-16 Identity = 43/94 (45.74%), Postives = 62/94 (65.96%), Query Frame = 1
Query: 265 LVNGRAMAIDILRDVRNEVEYLRDAYGRVPGLAVIVVGDRKDSAKYVSMKRQVATSVGFHSFASELPANVHHEDVLKVIDQYNRDDR*VGGALI 546
+++G+A+A I ++ +EV L+D YGRVPGLAV++VG RKDS YV MK++ VG SF LP V E++LKV+ +N D+ V G L+
Sbjct: 51 VIDGKAVAKTIQGEIASEVSRLKDRYGRVPGLAVVIVGARKDSQTYVRMKKKACADVGIASFEKCLPDTVSQEELLKVVRDFN-SDKSVHGILV 143
BLAST of mRNA_P-wetherbeei_contig21383.1.1 vs. uniprot
Match: A4S7A0_OSTLU (Methenyltetrahydrofolate cyclohydrolase n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S7A0_OSTLU) HSP 1 Score: 86.7 bits (213), Expect = 1.200e-16 Identity = 45/105 (42.86%), Postives = 68/105 (64.76%), Query Frame = 1
Query: 259 AMLVNGRAMAIDILRDVRNEVEYLRDAYGRVPGLAVIVVGDRKDSAKYVSMKRQVATSVGFHSFASELPANVHHEDVLKVIDQYNRDDR*VGGALIISRILRPKG 573
A +++G+ +A I +++ EV+ LR +G+VPGLAV++VGDRKDS YV MKR+ G SF +ELPA+ +VL + ++N D R V G L+ ++ PKG
Sbjct: 9 AAIIDGKTIASTIRAEIKGEVDALRAKHGKVPGLAVVIVGDRKDSQTYVRMKRKACEEAGIESFHAELPASASEAEVLATVRKFNADAR-VHGILV--QLPLPKG 110
BLAST of mRNA_P-wetherbeei_contig21383.1.1 vs. uniprot
Match: A0A1Y1HJ72_KLENI (Methenyltetrahydrofolate cyclohydrolase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HJ72_KLENI) HSP 1 Score: 86.7 bits (213), Expect = 1.440e-16 Identity = 41/96 (42.71%), Postives = 66/96 (68.75%), Query Frame = 1
Query: 259 AMLVNGRAMAIDILRDVRNEVEYLRDAYGRVPGLAVIVVGDRKDSAKYVSMKRQVATSVGFHSFASELPANVHHEDVLKVIDQYNRDDR*VGGALI 546
A +++G A+A DI ++ ++V+ +++ YG+VPGLAVI+VG+RKDS YV MKR++ VGF SF ++P + E+VL+ + +N D V G L+
Sbjct: 9 AKIIDGIAIAKDIRLEITSDVQKMKEVYGKVPGLAVIIVGERKDSQTYVRMKRRMCAEVGFVSFDKDMPGDASEEEVLQAVKAFNEDSA-VHGILV 103
BLAST of mRNA_P-wetherbeei_contig21383.1.1 vs. uniprot
Match: A6XGU7_9CHLO (Methenyltetrahydrofolate cyclohydrolase (Fragment) n=1 Tax=Polytomella parva TaxID=51329 RepID=A6XGU7_9CHLO) HSP 1 Score: 86.7 bits (213), Expect = 1.460e-16 Identity = 42/101 (41.58%), Postives = 68/101 (67.33%), Query Frame = 1
Query: 244 ASRPRAMLVNGRAMAIDILRDVRNEVEYLRDAYGRVPGLAVIVVGDRKDSAKYVSMKRQVATSVGFHSFASELPANVHHEDVLKVIDQYNRDDR*VGGALI 546
A+R A L++G+ +A I ++++ EVE L+ + PGLAV++VG RKDS YV K++ VGF+SF +LPA++ +D+LKV++ +N D + V G L+
Sbjct: 21 ATRATAKLIDGKFIAETIRKEIKEEVEVLKAKHNLTPGLAVVLVGQRKDSETYVRNKKKACQEVGFNSFGKDLPADITEQDLLKVVEDFNADPK-VHGVLV 120
BLAST of mRNA_P-wetherbeei_contig21383.1.1 vs. uniprot
Match: A0A383WIT8_TETOB (Methenyltetrahydrofolate cyclohydrolase n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WIT8_TETOB) HSP 1 Score: 87.4 bits (215), Expect = 1.940e-16 Identity = 45/103 (43.69%), Postives = 70/103 (67.96%), Query Frame = 1
Query: 238 SAASRPRAMLVNGRAMAIDILRDVRNEVEYLRDAYGRVPGLAVIVVGDRKDSAKYVSMKRQVATSVGFHSFASELPANVHHEDVLKVIDQYNRDDR*VGGALI 546
+AA+ +A L++G+ +A DI +++ EV+ L+ A GR PGLAV++VG RKDS YV K++ VGF SF ++L +V E++L+V+ QYN D + V G L+
Sbjct: 134 AAAAPTKAGLIDGKKIAEDIRKEIAAEVQQLQKAAGRAPGLAVVLVGARKDSETYVRSKKKACAEVGFESFGTDLAEDVSQEELLRVVAQYNADPK-VDGILV 235 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21383.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21383.1.1 >prot_P-wetherbeei_contig21383.1.1 ID=prot_P-wetherbeei_contig21383.1.1|Name=mRNA_P-wetherbeei_contig21383.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=131bp MRWRGGGFPRLHHLVASKCGCHGVSQRVGQAAGRSAASRPRAMLVNGRAMback to top mRNA from alignment at P-wetherbeei_contig21383:501..1171+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21383.1.1 ID=mRNA_P-wetherbeei_contig21383.1.1|Name=mRNA_P-wetherbeei_contig21383.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=671bp|location=Sequence derived from alignment at P-wetherbeei_contig21383:501..1171+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21383:501..1171+ >mRNA_P-wetherbeei_contig21383.1.1 ID=mRNA_P-wetherbeei_contig21383.1.1|Name=mRNA_P-wetherbeei_contig21383.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=393bp|location=Sequence derived from alignment at P-wetherbeei_contig21383:501..1171+ (Phaeothamnion wetherbeei SAG_119_79)back to top |