mRNA_P-wetherbeei_contig21371.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21371.1.1 vs. uniprot
Match: A0A8J2SM68_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SM68_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 1.950e-8 Identity = 22/35 (62.86%), Postives = 26/35 (74.29%), Query Frame = 1
Query: 25 WWFRDESFRSPLVALGPERKYVTFEPDHGGWNNIR 129
+W R E+ SP GP+RKY+TFEPD GGWNNIR
Sbjct: 149 YWSRGETHASPYAGYGPKRKYLTFEPDAGGWNNIR 183
BLAST of mRNA_P-wetherbeei_contig21371.1.1 vs. uniprot
Match: W7U3X1_9STRA (Fucosyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3X1_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 1.270e-7 Identity = 25/42 (59.52%), Postives = 28/42 (66.67%), Query Frame = 1
Query: 16 DSVWWFRD----ESFRSPLVALGPERKYVTFEPDHGGWNNIR 129
D +W R E +P ALGPE+KYVTFEPD GGWNNIR
Sbjct: 155 DIFYWQRYDPDLEKVVNPWAALGPEKKYVTFEPDRGGWNNIR 196
BLAST of mRNA_P-wetherbeei_contig21371.1.1 vs. uniprot
Match: A0A6H5L164_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L164_9PHAE) HSP 1 Score: 54.7 bits (130), Expect = 1.740e-7 Identity = 24/43 (55.81%), Postives = 29/43 (67.44%), Query Frame = 1
Query: 10 IIDSVWWFR---DESFRSPLVALGPERKYVTFEPDHGGWNNIR 129
I+D +W DES+ SP +LGP KYVTFEPD GWNN+R
Sbjct: 338 IVDIAYWKEVPGDESWVSPYSSLGPAAKYVTFEPDCAGWNNVR 380
BLAST of mRNA_P-wetherbeei_contig21371.1.1 vs. uniprot
Match: B8C6L6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C6L6_THAPS) HSP 1 Score: 53.5 bits (127), Expect = 4.450e-7 Identity = 26/47 (55.32%), Postives = 30/47 (63.83%), Query Frame = 1
Query: 1 DGTIIDS-VWWF---RDESFRSPLVALGPERKYVTFEPDHGGWNNIR 129
D TIID V+W D S+ SP+ KY+TFEPDHGGWNNIR
Sbjct: 212 DQTIIDEMVFWSDIPSDASYVSPMYDANAPEKYLTFEPDHGGWNNIR 258
BLAST of mRNA_P-wetherbeei_contig21371.1.1 vs. uniprot
Match: F0YC72_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC72_AURAN) HSP 1 Score: 52.8 bits (125), Expect = 8.320e-7 Identity = 23/36 (63.89%), Postives = 25/36 (69.44%), Query Frame = 1
Query: 25 WWFRDESFR-SPLVALGPERKYVTFEPDHGGWNNIR 129
+W RD R SP GP KYVTFEPD+GGWNNIR
Sbjct: 386 YWARDPEPRVSPYADYGPSAKYVTFEPDNGGWNNIR 421
BLAST of mRNA_P-wetherbeei_contig21371.1.1 vs. uniprot
Match: A0A7S2IFB7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IFB7_9STRA) HSP 1 Score: 51.6 bits (122), Expect = 1.430e-6 Identity = 24/42 (57.14%), Postives = 28/42 (66.67%), Query Frame = 1
Query: 16 DSVWWF---RDESFRSPLVALGPER-KYVTFEPDHGGWNNIR 129
+ V+W D +RSP A G E KY+TFEPDHGGWNNIR
Sbjct: 119 EMVFWSDIPSDAKYRSPFHAKGLENAKYITFEPDHGGWNNIR 160
BLAST of mRNA_P-wetherbeei_contig21371.1.1 vs. uniprot
Match: A0A7S4W364_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W364_9STRA) HSP 1 Score: 48.5 bits (114), Expect = 8.740e-6 Identity = 22/41 (53.66%), Postives = 26/41 (63.41%), Query Frame = 1
Query: 16 DSVWWFR---DESFRSPLVALGPERKYVTFEPDHGGWNNIR 129
D V+W D ++SP E KY+TFEPDHGGWNNIR
Sbjct: 23 DVVYWSNIPSDAEYKSPFYDPS-EEKYLTFEPDHGGWNNIR 62
BLAST of mRNA_P-wetherbeei_contig21371.1.1 vs. uniprot
Match: A0A6S7ZGN1_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S7ZGN1_9STRA) HSP 1 Score: 49.7 bits (117), Expect = 1.020e-5 Identity = 20/39 (51.28%), Postives = 27/39 (69.23%), Query Frame = 1
Query: 22 VWWF---RDESFRSPLVALGPERKYVTFEPDHGGWNNIR 129
V+W +D+ + SP LGP+ KY+ FEPD GGWNN+R
Sbjct: 154 VYWQNLPKDKVWESPYKNLGPKNKYLLFEPDEGGWNNLR 192
BLAST of mRNA_P-wetherbeei_contig21371.1.1 vs. uniprot
Match: B8C6P2_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C6P2_THAPS) HSP 1 Score: 49.7 bits (117), Expect = 1.020e-5 Identity = 20/31 (64.52%), Postives = 25/31 (80.65%), Query Frame = 1
Query: 37 DESFRSPLVALGPERKYVTFEPDHGGWNNIR 129
D S++SP + G E K++TFEPDHGGWNNIR
Sbjct: 139 DASYKSPFMIEG-EEKFLTFEPDHGGWNNIR 168
BLAST of mRNA_P-wetherbeei_contig21371.1.1 vs. uniprot
Match: A0A7S1Y7W2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y7W2_9STRA) HSP 1 Score: 48.9 bits (115), Expect = 1.420e-5 Identity = 19/41 (46.34%), Postives = 27/41 (65.85%), Query Frame = 1
Query: 16 DSVWWF---RDESFRSPLVALGPERKYVTFEPDHGGWNNIR 129
+ V+W D ++RSP +++Y+TFE DHGGWNNIR
Sbjct: 135 EMVYWEDIPSDNTYRSPFTPTDGKKQYITFESDHGGWNNIR 175 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21371.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21371.1.1 >prot_P-wetherbeei_contig21371.1.1 ID=prot_P-wetherbeei_contig21371.1.1|Name=mRNA_P-wetherbeei_contig21371.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=43bp DGTIIDSVWWFRDESFRSPLVALGPERKYVTFEPDHGGWNNIRback to top mRNA from alignment at P-wetherbeei_contig21371:608..736- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21371.1.1 ID=mRNA_P-wetherbeei_contig21371.1.1|Name=mRNA_P-wetherbeei_contig21371.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=129bp|location=Sequence derived from alignment at P-wetherbeei_contig21371:608..736- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21371:608..736- >mRNA_P-wetherbeei_contig21371.1.1 ID=mRNA_P-wetherbeei_contig21371.1.1|Name=mRNA_P-wetherbeei_contig21371.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=129bp|location=Sequence derived from alignment at P-wetherbeei_contig21371:608..736- (Phaeothamnion wetherbeei SAG_119_79)back to top |