mRNA_P-wetherbeei_contig21295.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21295.1.1 vs. uniprot
Match: A0A7S2WL38_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WL38_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 2.130e-15 Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 1
Query: 1 WLPCHAIDLAPEGFIKPHVDSVKFSGRVVAGLSLVSAAVMRL 126
WLP H IDLAPEGFI PHVDSVKFSG VVAGLSL+S AVM+L
Sbjct: 56 WLPVHVIDLAPEGFISPHVDSVKFSGGVVAGLSLLSPAVMKL 97
BLAST of mRNA_P-wetherbeei_contig21295.1.1 vs. uniprot
Match: A0A835Z757_9STRA (2OG-FeII_Oxy_2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z757_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 4.430e-14 Identity = 33/43 (76.74%), Postives = 38/43 (88.37%), Query Frame = 1
Query: 1 WLPCHAIDLAPEGFIKPHVDSVKFSGRVVAGLSLVSAAVMRLR 129
WLP HAIDL+ +G IKPHVDSVKFSG+VVAGLSL+S A+M LR
Sbjct: 91 WLPVHAIDLSAQGHIKPHVDSVKFSGKVVAGLSLLSTALMTLR 133
BLAST of mRNA_P-wetherbeei_contig21295.1.1 vs. uniprot
Match: A0A7S0CLP9_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CLP9_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 2.990e-13 Identity = 30/43 (69.77%), Postives = 37/43 (86.05%), Query Frame = 1
Query: 1 WLPCHAIDLAPEGFIKPHVDSVKFSGRVVAGLSLVSAAVMRLR 129
WLPCHAIDL +G + HVDSVKFSG +V+GLSLVS+++MRLR
Sbjct: 76 WLPCHAIDLGNDGTLSAHVDSVKFSGDIVSGLSLVSSSIMRLR 118
BLAST of mRNA_P-wetherbeei_contig21295.1.1 vs. uniprot
Match: B8BQR0_THAPS (2OG-FeII_Oxy_2 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQR0_THAPS) HSP 1 Score: 66.2 bits (160), Expect = 2.510e-12 Identity = 27/43 (62.79%), Postives = 38/43 (88.37%), Query Frame = 1
Query: 1 WLPCHAIDLAPEGFIKPHVDSVKFSGRVVAGLSLVSAAVMRLR 129
W+PCHAIDL+ +G + HVDSVKFSG++VAG+SL+S ++MRL+
Sbjct: 64 WIPCHAIDLSEKGRLDAHVDSVKFSGKIVAGISLLSDSIMRLK 106
BLAST of mRNA_P-wetherbeei_contig21295.1.1 vs. uniprot
Match: A0A7S2LHY8_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LHY8_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 2.680e-12 Identity = 29/43 (67.44%), Postives = 37/43 (86.05%), Query Frame = 1
Query: 1 WLPCHAIDLAPEGFIKPHVDSVKFSGRVVAGLSLVSAAVMRLR 129
WLPCHAIDL+ +G + HVDSVKFSG +VAG+SL+S ++MRLR
Sbjct: 131 WLPCHAIDLSKKGRLDAHVDSVKFSGEIVAGISLLSDSIMRLR 173
BLAST of mRNA_P-wetherbeei_contig21295.1.1 vs. uniprot
Match: A0A7S1YZD1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YZD1_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 3.150e-12 Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 1
Query: 1 WLPCHAIDLAPEGFIKPHVDSVKFSGRVVAGLSLVSAAVMRLR 129
WLP HAIDLA G + HVDSVKFSG +VAGLSL+S+++MRLR
Sbjct: 48 WLPSHAIDLAKHGELTAHVDSVKFSGGIVAGLSLLSSSIMRLR 90
BLAST of mRNA_P-wetherbeei_contig21295.1.1 vs. uniprot
Match: B7GDM4_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GDM4_PHATC) HSP 1 Score: 67.0 bits (162), Expect = 3.580e-12 Identity = 29/43 (67.44%), Postives = 36/43 (83.72%), Query Frame = 1
Query: 1 WLPCHAIDLAPEGFIKPHVDSVKFSGRVVAGLSLVSAAVMRLR 129
WLPCH IDL EG + HVDSV+FSG +VAGLSL+S+++MRLR
Sbjct: 137 WLPCHCIDLKKEGELNAHVDSVRFSGDIVAGLSLMSSSIMRLR 179
BLAST of mRNA_P-wetherbeei_contig21295.1.1 vs. uniprot
Match: A0A7S2S819_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S819_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 4.720e-12 Identity = 30/43 (69.77%), Postives = 35/43 (81.40%), Query Frame = 1
Query: 1 WLPCHAIDLAPEGFIKPHVDSVKFSGRVVAGLSLVSAAVMRLR 129
WLPCHAIDL G I HVDSVKFSG +VAGLSL+S ++MRL+
Sbjct: 134 WLPCHAIDLQKRGEITAHVDSVKFSGYIVAGLSLLSPSIMRLK 176
BLAST of mRNA_P-wetherbeei_contig21295.1.1 vs. uniprot
Match: K0SDK4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SDK4_THAOC) HSP 1 Score: 67.0 bits (162), Expect = 7.830e-12 Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 1
Query: 1 WLPCHAIDLAPEGFIKPHVDSVKFSGRVVAGLSLVSAAVMRLR 129
WLPCHAIDLA +G + HVDSVKFSG VV G+SL+S ++MRLR
Sbjct: 1144 WLPCHAIDLAQDGDLDAHVDSVKFSGGVVCGISLLSDSIMRLR 1186
BLAST of mRNA_P-wetherbeei_contig21295.1.1 vs. uniprot
Match: A0A448ZJT6_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZJT6_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 8.180e-12 Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 1
Query: 1 WLPCHAIDLAPEGFIKPHVDSVKFSGRVVAGLSLVSAAVMRL 126
WLPCHAIDL EG ++ HVDSV+FSG +VAGLSL S AVMRL
Sbjct: 188 WLPCHAIDLKREGELRAHVDSVRFSGHLVAGLSLRSTAVMRL 229 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21295.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21295.1.1 >prot_P-wetherbeei_contig21295.1.1 ID=prot_P-wetherbeei_contig21295.1.1|Name=mRNA_P-wetherbeei_contig21295.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=43bp WLPCHAIDLAPEGFIKPHVDSVKFSGRVVAGLSLVSAAVMRLRback to top mRNA from alignment at P-wetherbeei_contig21295:676..804- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21295.1.1 ID=mRNA_P-wetherbeei_contig21295.1.1|Name=mRNA_P-wetherbeei_contig21295.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=129bp|location=Sequence derived from alignment at P-wetherbeei_contig21295:676..804- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21295:676..804- >mRNA_P-wetherbeei_contig21295.1.1 ID=mRNA_P-wetherbeei_contig21295.1.1|Name=mRNA_P-wetherbeei_contig21295.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=129bp|location=Sequence derived from alignment at P-wetherbeei_contig21295:676..804- (Phaeothamnion wetherbeei SAG_119_79)back to top |