mRNA_P-wetherbeei_contig2119.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig2119.2.1 vs. uniprot
Match: D7FXF0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXF0_ECTSI) HSP 1 Score: 82.0 bits (201), Expect = 1.620e-15 Identity = 35/68 (51.47%), Postives = 49/68 (72.06%), Query Frame = 2
Query: 236 PAAPYYWEAGGTRRLPWYQKSWHNVHYYGQRTLDGAELIGEVVANLLGLTESKYQYVIDAIETEQARK 439
P PY+WE GG + W+ K H++H+ G + + GAE +GEVVAN LGL +SKYQYVIDA+E ++ R+
Sbjct: 27 PVEPYFWEEGGNPNVDWWAKVRHSLHFGGVKAVAGAEAVGEVVANTLGLNDSKYQYVIDALEADEIRE 94
BLAST of mRNA_P-wetherbeei_contig2119.2.1 vs. uniprot
Match: A0A7S2RVN4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RVN4_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 4.220e-13 Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 2
Query: 245 PYYWEAGGTRRLPWYQKSWHNVHYYGQRTLDGAELIGEVVANLLGLTESKYQYVIDAIETEQAR 436
PYYWE + +P +QK+WH + G+R G E +GEVVA++LGL ES+YQ+VIDA E E+AR
Sbjct: 51 PYYWELVDVQDVPAWQKAWHISRWTGERVFRGMEFVGEVVADILGLNESRYQWVIDAAENEKAR 114
BLAST of mRNA_P-wetherbeei_contig2119.2.1 vs. uniprot
Match: A0A6G0XJZ9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJZ9_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 4.460e-11 Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 2
Query: 212 DDSAAAMAPAAPYYWEAGGTRRLPWYQKSWHNVHYYGQRTLDGAELIGEVVANLLGLTESKYQYVIDAIETEQARK 439
+DS A + AAPYYWE T + W K WH H+ G + G E GEVVA LGLT SKY ++++ E ++ K
Sbjct: 3 EDSEAPIE-AAPYYWETSSTEDVGWSTKVWHWTHWTGDKIFTGMEFGGEVVATFLGLTRSKYDWILETKERDEHEK 77
BLAST of mRNA_P-wetherbeei_contig2119.2.1 vs. uniprot
Match: A0A7S2V0M7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0M7_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 3.450e-8 Identity = 29/65 (44.62%), Postives = 45/65 (69.23%), Query Frame = 2
Query: 242 APYYWEAGGT--RRLPWYQKSWHNVHYYGQRTLDGAELIGEVVANLLGLTESKYQYVIDAIETEQ 430
APYYWE + LP ++ +HN ++ ++ +DG E GE VA++LGL +S+YQYVIDA+E ++
Sbjct: 48 APYYWEEPSSTDNPLPLGRRVFHNFYWAAEKIVDGMEFAGECVAHMLGLNQSQYQYVIDAMEIDR 112
BLAST of mRNA_P-wetherbeei_contig2119.2.1 vs. uniprot
Match: A0A1V9YAL0_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YAL0_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 1.940e-7 Identity = 25/64 (39.06%), Postives = 39/64 (60.94%), Query Frame = 2
Query: 248 YYWEAGGTRRLPWYQKSWHNVHYYGQRTLDGAELIGEVVANLLGLTESKYQYVIDAIETEQARK 439
YYW++ P K WH H+ G++ +G E GEV+A+ LGLT SKY ++++A E ++ K
Sbjct: 14 YYWDSVDAASTPATTKVWHWTHWSGKKAFEGMEFGGEVIASFLGLTRSKYDWILEAKERDEQEK 77
BLAST of mRNA_P-wetherbeei_contig2119.2.1 vs. uniprot
Match: A0A067CPU0_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CPU0_SAPPC) HSP 1 Score: 58.9 bits (141), Expect = 2.270e-7 Identity = 28/76 (36.84%), Postives = 43/76 (56.58%), Query Frame = 2
Query: 212 DDSAAAMAPAAPYYWEAGGTRRLPWYQKSWHNVHYYGQRTLDGAELIGEVVANLLGLTESKYQYVIDAIETEQARK 439
DD YYW+A + P K+WH ++ GQ+ L+G E GEV+A LGLT SKY +++++ E ++ K
Sbjct: 8 DDDECKEGEKELYYWDA--SDEAPLTTKAWHWTYWSGQKVLEGMEFGGEVIATFLGLTRSKYDWILESKERDEQEK 81
BLAST of mRNA_P-wetherbeei_contig2119.2.1 vs. uniprot
Match: A0A7S2CUC7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CUC7_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 4.910e-7 Identity = 27/66 (40.91%), Postives = 44/66 (66.67%), Query Frame = 2
Query: 245 PYYWEAGGTRRLPWYQKSWHNVHYYGQRTLDGAELIGEVVANLLGLTESKYQYVIDAIETEQARKE 442
PYYW+ G P ++K+ H ++G + G E IG +VA+L G+ +SKYQYVIDA++ ++ R++
Sbjct: 43 PYYWQLVGYNP-PLHRKASHIAWWFGSKVFYGMEFIGAIVADLAGMNQSKYQYVIDAMKEDERREQ 107
BLAST of mRNA_P-wetherbeei_contig2119.2.1 vs. uniprot
Match: A0A485L0M6_9STRA (Aste57867_13564 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L0M6_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 1.600e-6 Identity = 33/89 (37.08%), Postives = 43/89 (48.31%), Query Frame = 2
Query: 206 GDDDSAAAMAPAA-------PYYWEAG----GTRRLPWYQKSWHNVHYYGQRTLDGAELIGEVVANLLGLTESKYQYVIDAIETEQARK 439
G D++ PAA PYYWE G + K+WH + GQ+ G E GEVVA LGLT SKY ++++ E E K
Sbjct: 5 GPDNAPPPTVPAADEEEHVEPYYWETGTGYDAAAEVAVSTKAWHWTCWTGQKVFQGMEFGGEVVATFLGLTRSKYDWILETKEREDQEK 93
BLAST of mRNA_P-wetherbeei_contig2119.2.1 vs. uniprot
Match: T0QBK3_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QBK3_SAPDV) HSP 1 Score: 55.1 bits (131), Expect = 5.170e-6 Identity = 24/64 (37.50%), Postives = 40/64 (62.50%), Query Frame = 2
Query: 248 YYWEAGGTRRLPWYQKSWHNVHYYGQRTLDGAELIGEVVANLLGLTESKYQYVIDAIETEQARK 439
YYW++ RL K+WH ++ G++ +G E GEV+A LGLT SKY +++++ E ++ K
Sbjct: 21 YYWDSSEDARLT--TKAWHWTYWSGKKVYEGMEFGGEVIATFLGLTRSKYDWILESRERDEQEK 82
BLAST of mRNA_P-wetherbeei_contig2119.2.1 vs. uniprot
Match: A0A0P1B079_PLAHL (FAM177 family n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B079_PLAHL) HSP 1 Score: 54.7 bits (130), Expect = 1.020e-5 Identity = 28/62 (45.16%), Postives = 39/62 (62.90%), Query Frame = 2
Query: 257 EAGGTRRLPWYQKSWHNVHYYGQRTLDGAELIGEVVANLLGLTESKYQYVIDAIETEQARKE 442
E G R LP + W + + G +T D + GEVVAN LGL +SKYQ++IDA E E+ +K+
Sbjct: 37 ECSGVRLLPEFVWDW--ICWSGNKTFDILDFAGEVVANFLGLNQSKYQWIIDAQEREEQKKQ 96 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2119.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig2119.2.1 >prot_P-wetherbeei_contig2119.2.1 ID=prot_P-wetherbeei_contig2119.2.1|Name=mRNA_P-wetherbeei_contig2119.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=199bp MAAVGQQRASPRVSDVELSDIEVATTARIDNYGTLSPTGGDDDSAAAMAPback to top mRNA from alignment at P-wetherbeei_contig2119:1570..2431- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig2119.2.1 ID=mRNA_P-wetherbeei_contig2119.2.1|Name=mRNA_P-wetherbeei_contig2119.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=862bp|location=Sequence derived from alignment at P-wetherbeei_contig2119:1570..2431- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig2119:1570..2431- >mRNA_P-wetherbeei_contig2119.2.1 ID=mRNA_P-wetherbeei_contig2119.2.1|Name=mRNA_P-wetherbeei_contig2119.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=597bp|location=Sequence derived from alignment at P-wetherbeei_contig2119:1570..2431- (Phaeothamnion wetherbeei SAG_119_79)back to top |