mRNA_P-wetherbeei_contig21133.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21133.2.1 vs. uniprot
Match: A0A3C2B306_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B306_9ACTN) HSP 1 Score: 147 bits (372), Expect = 7.610e-43 Identity = 79/108 (73.15%), Postives = 93/108 (86.11%), Query Frame = 1
Query: 4 SPMDETADDRAAMRAFLQRCEVRLSTLHRVATALLSGAGILVLLPAVERDSVIQELRALLHGPPTLTRLLLAGAVAISIALALCVLWLVVQELTRFYFHANHVEHEGR 327
S + T+D+RAAMRAFLQRCEVRLST+HRVATALLSGAGILVLLPAVERD+V+Q +R+LL GP + +R LLA AVA+SI LAL VLWL++ ELTRFYFHANHV + R
Sbjct: 4 SSVGPTSDERAAMRAFLQRCEVRLSTMHRVATALLSGAGILVLLPAVERDAVLQVMRSLLAGPVSWSRGLLAAAVALSIFLALAVLWLLIIELTRFYFHANHVVQDDR 111
BLAST of mRNA_P-wetherbeei_contig21133.2.1 vs. uniprot
Match: A0A7X9KH53_9ACTN (Uncharacterized protein n=3 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9KH53_9ACTN) HSP 1 Score: 144 bits (363), Expect = 1.370e-39 Identity = 79/99 (79.80%), Postives = 87/99 (87.88%), Query Frame = 1
Query: 22 ADDRAAMRAFLQRCEVRLSTLHRVATALLSGAGILVLLPAVERDSVIQELRALLHGPPTLTRLLLAGAVAISIALALCVLWLVVQELTRFYFHANHVEH 318
AD+RAAMR FLQRCEVRLST+HRVATALLSGAGILVLLPA+ERD+V+Q LRALL GP + +R LL AVA+SI LAL VLWLVV ELTRFYFHANHV H
Sbjct: 14 ADERAAMRGFLQRCEVRLSTMHRVATALLSGAGILVLLPALERDAVLQVLRALLAGPVSWSRGLLMIAVALSIVLALVVLWLVVIELTRFYFHANHVVH 112
BLAST of mRNA_P-wetherbeei_contig21133.2.1 vs. uniprot
Match: A0A6I3EQ17_9ACTN (Uncharacterized protein n=3 Tax=root TaxID=1 RepID=A0A6I3EQ17_9ACTN) HSP 1 Score: 139 bits (349), Expect = 1.300e-37 Identity = 76/105 (72.38%), Postives = 88/105 (83.81%), Query Frame = 1
Query: 4 SPMDETADDRAAMRAFLQRCEVRLSTLHRVATALLSGAGILVLLPAVERDSVIQELRALLHGPPTLTRLLLAGAVAISIALALCVLWLVVQELTRFYFHANHVEH 318
S + T D+RAAMR++LQRC+VRLST+HRVATALLSGAGILVLLPAVERDSV+Q +RALL GP + +R LL AV +SI LAL VLWLV+ ELTRFYF ANHV H
Sbjct: 2 SDAEPTLDERAAMRSYLQRCDVRLSTVHRVATALLSGAGILVLLPAVERDSVLQVIRALLAGPVSWSRGLLLVAVVLSIFLALAVLWLVIIELTRFYFDANHVIH 106
BLAST of mRNA_P-wetherbeei_contig21133.2.1 vs. uniprot
Match: UPI001C636103 (hypothetical protein n=1 Tax=Iamia sp. SCSIO 61187 TaxID=2722752 RepID=UPI001C636103) HSP 1 Score: 113 bits (283), Expect = 7.530e-28 Identity = 59/101 (58.42%), Postives = 80/101 (79.21%), Query Frame = 1
Query: 19 TADDRAAMRAFLQRCEVRLSTLHRVATALLSGAGILVLLPAVERDSVIQELRALLHGPPTLTRLLLAGAVAISIALALCVLWLVVQELTRFYFHANHVEHE 321
++D+RAA+RA+LQR EVRLST+HRVA+ALLSGAG++VLLPAV RDSV+ + AL+ G T +LL AV S+AL + L ++++LT+FYFHANH+ HE
Sbjct: 15 SSDERAAVRAYLQRSEVRLSTVHRVASALLSGAGLMVLLPAVARDSVVDVVHALVRGSVTAPDVLLLVAVGTSLALPVTALLFLLRDLTQFYFHANHIRHE 115
BLAST of mRNA_P-wetherbeei_contig21133.2.1 vs. uniprot
Match: A0A2E0RV00_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0RV00_9ACTN) HSP 1 Score: 110 bits (275), Expect = 1.020e-26 Identity = 59/103 (57.28%), Postives = 75/103 (72.82%), Query Frame = 1
Query: 19 TADDRAAMRAFLQRCEVRLSTLHRVATALLSGAGILVLLPAVERDSVIQELRALLHGPPTLTRLLLAGAVAISIALALCVLWLVVQELTRFYFHANHVEHEGR 327
+AD+RAA RAF+ RCEVRLST HR+A LLSGAG+LV+LP V RDSV LR+LL G ++ + LA V +A+ + LWL+ +LTRFYFHANH+ EGR
Sbjct: 12 SADERAAARAFVARCEVRLSTFHRIAVGLLSGAGLLVVLPVVARDSVAGVLRSLLIGEIAVSDIALAIGVMAMLAVPVVALWLLFADLTRFYFHANHLGGEGR 114
BLAST of mRNA_P-wetherbeei_contig21133.2.1 vs. uniprot
Match: A0A7X7HT53_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7HT53_9ACTN) HSP 1 Score: 105 bits (262), Expect = 5.130e-25 Identity = 55/100 (55.00%), Postives = 75/100 (75.00%), Query Frame = 1
Query: 25 DDRAAMRAFLQRCEVRLSTLHRVATALLSGAGILVLLPAVERDSVIQELRALLHGPPTLTRLLLAGAVAISIALALCVLWLVVQELTRFYFHANHVEHEG 324
D+RAA+RAFLQR EVRLST+HRVATALLSGAG++VLLP V RD+V + +R + G + +LL AV ++ ++ + L +V ++LT FYFHA HV+H G
Sbjct: 12 DERAAVRAFLQRAEVRLSTVHRVATALLSGAGLMVLLPVVGRDAVAEVIRHIFTGTVDVPHVLLGVAVLVAFSVPVVSLVMVFRDLTEFYFHATHVQHAG 111
BLAST of mRNA_P-wetherbeei_contig21133.2.1 vs. uniprot
Match: A0A7Y2GSH9_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GSH9_9ACTN) HSP 1 Score: 100 bits (249), Expect = 5.730e-23 Identity = 54/101 (53.47%), Postives = 69/101 (68.32%), Query Frame = 1
Query: 25 DDRAAMRAFLQRCEVRLSTLHRVATALLSGAGILVLLPAVERDSVIQELRALLHGPPTLTRLLLAGAVAISIALALCVLWLVVQELTRFYFHANHVEHEGR 327
D+RAA RAF+ RCEVRLST HR+A +LSGAG+LV+LP V RDSV LR+LL + L V +A+ + LWL+ +LTRFYFHANH+ +GR
Sbjct: 13 DERAAARAFVARCEVRLSTFHRIAVGMLSGAGLLVVLPVVARDSVTGVLRSLLIDGIGAADIALVIGVVAMLAVPVTALWLLFADLTRFYFHANHLGGDGR 113
BLAST of mRNA_P-wetherbeei_contig21133.2.1 vs. uniprot
Match: A0A6C7E7U9_ILUCY (Uncharacterized protein n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7E7U9_ILUCY) HSP 1 Score: 99.8 bits (247), Expect = 1.200e-22 Identity = 55/98 (56.12%), Postives = 68/98 (69.39%), Query Frame = 1
Query: 19 TADDRAAMRAFLQRCEVRLSTLHRVATALLSGAGILVLLPAVERDSVIQELRALLHGPPTLTRLLLAGAVAISIALALCVLWLVVQELTRFYFHANHV 312
T D+RAA RAF+ RCEVR+ST HR+A LLSGAG+LV+LP V RDS+ LRAL G TL+ LL V + + LWL+ +LTRFYFHANH+
Sbjct: 11 TPDERAAARAFVARCEVRISTFHRIAVGLLSGAGLLVVLPVVARDSITGILRALAVGEFTLSDGLLGVMVLAILGVPGFALWLLFADLTRFYFHANHL 108
BLAST of mRNA_P-wetherbeei_contig21133.2.1 vs. uniprot
Match: A0A6J7AK50_9ZZZZ (Unannotated protein n=1 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J7AK50_9ZZZZ) HSP 1 Score: 78.6 bits (192), Expect = 1.100e-16 Identity = 53/89 (59.55%), Postives = 62/89 (69.66%), Query Frame = -2
Query: 3 TSHSTHNASAIEIATAPARSSRVSVGGPCSSARSSWITESRSTAGSRTRIPAPDSSAVATRWSVDSRTSHRWRKARIAARSSAVSSIGE 269
TSHST NA I+ TA + S R GP SSAR + T SRSTAGS TR+PAPD+SAVATR +V+S TS RWR R+AARSS V S +
Sbjct: 3 TSHSTANARKIDNTTATSSSPRDQDTGPASSARITCSTLSRSTAGSSTRMPAPDNSAVATRCTVESLTSQRWRYERMAARSSRVGSASD 91
BLAST of mRNA_P-wetherbeei_contig21133.2.1 vs. uniprot
Match: UPI00201B8A78 (hypothetical protein n=1 Tax=Bradyrhizobium sp. C-145 TaxID=574727 RepID=UPI00201B8A78) HSP 1 Score: 72.4 bits (176), Expect = 6.030e-14 Identity = 42/104 (40.38%), Postives = 60/104 (57.69%), Query Frame = 1
Query: 40 MRAFLQRCEVRLSTLHRVATALLSGAGILVLLPAVERDSVIQELRALLH--------GPPTLTRLLLAGAVAISIALALCVLWLVVQELTRFYFHANHVEHEGR 327
MRAFLQR EVRLST+HR+ A LSGAG+L LLP +D+ + A++H P L ++ VA + + + LW ++++L+ FYF AN H R
Sbjct: 1 MRAFLQRAEVRLSTMHRIGGAFLSGAGLLFLLPVFAKDAFVAISEAVVHVWPFIQATKSPDLWLVIYGIPVATAFVIPVVALWALLRDLSLFYFSANLPSHASR 104 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21133.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21133.2.1 >prot_P-wetherbeei_contig21133.2.1 ID=prot_P-wetherbeei_contig21133.2.1|Name=mRNA_P-wetherbeei_contig21133.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=106bp MDETADDRAAMRAFLQRCEVRLSTLHRVATALLSGAGILVLLPAVERDSVback to top mRNA from alignment at P-wetherbeei_contig21133:854..1180+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21133.2.1 ID=mRNA_P-wetherbeei_contig21133.2.1|Name=mRNA_P-wetherbeei_contig21133.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=327bp|location=Sequence derived from alignment at P-wetherbeei_contig21133:854..1180+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21133:854..1180+ >mRNA_P-wetherbeei_contig21133.2.1 ID=mRNA_P-wetherbeei_contig21133.2.1|Name=mRNA_P-wetherbeei_contig21133.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=318bp|location=Sequence derived from alignment at P-wetherbeei_contig21133:854..1180+ (Phaeothamnion wetherbeei SAG_119_79)back to top |