mRNA_P-wetherbeei_contig21014.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21014.1.1 vs. uniprot
Match: A0A6H5LQ87_9PHAE (LETM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQ87_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 5.710e-15 Identity = 32/36 (88.89%), Postives = 36/36 (100.00%), Query Frame = 1
Query: 1 LFVREDGTVDWDGAIQSGRDVARFGQELWDRINGES 108
LFVR+DGTVDWDGAIQSGR+VARFGQELWDRING++
Sbjct: 417 LFVRDDGTVDWDGAIQSGREVARFGQELWDRINGQN 452
BLAST of mRNA_P-wetherbeei_contig21014.1.1 vs. uniprot
Match: D8LP03_ECTSI (LETM1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP03_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 5.730e-15 Identity = 32/36 (88.89%), Postives = 36/36 (100.00%), Query Frame = 1
Query: 1 LFVREDGTVDWDGAIQSGRDVARFGQELWDRINGES 108
LFVR+DGTVDWDGAIQSGR+VARFGQELWDRING++
Sbjct: 233 LFVRDDGTVDWDGAIQSGREVARFGQELWDRINGQN 268
BLAST of mRNA_P-wetherbeei_contig21014.1.1 vs. uniprot
Match: A0A835YNT1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNT1_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 4.770e-14 Identity = 30/35 (85.71%), Postives = 35/35 (100.00%), Query Frame = 1
Query: 1 LFVREDGTVDWDGAIQSGRDVARFGQELWDRINGE 105
LFVR+DGTVDWDGAIQSGR+VARFG+ELW+RING+
Sbjct: 193 LFVRDDGTVDWDGAIQSGREVARFGKELWERINGQ 227
BLAST of mRNA_P-wetherbeei_contig21014.1.1 vs. uniprot
Match: A0A7S1NU99_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NU99_9EUGL) HSP 1 Score: 65.5 bits (158), Expect = 2.620e-11 Identity = 25/36 (69.44%), Postives = 34/36 (94.44%), Query Frame = 1
Query: 1 LFVREDGTVDWDGAIQSGRDVARFGQELWDRINGES 108
LFVR+DGTVDWDGA++SG+++A FGQE+WDR+NG +
Sbjct: 403 LFVRDDGTVDWDGAMESGKELAVFGQEVWDRLNGRT 438
BLAST of mRNA_P-wetherbeei_contig21014.1.1 vs. uniprot
Match: A0A7S4DP72_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DP72_9EUKA) HSP 1 Score: 63.5 bits (153), Expect = 7.890e-11 Identity = 25/37 (67.57%), Postives = 32/37 (86.49%), Query Frame = 1
Query: 1 LFVREDGTVDWDGAIQSGRDVARFGQELWDRINGESA 111
L VREDGTVDWDG I+ GR+VA+FGQ+LW R+N +S+
Sbjct: 132 LIVREDGTVDWDGVIEGGREVAQFGQDLWQRLNAKSS 168
BLAST of mRNA_P-wetherbeei_contig21014.1.1 vs. uniprot
Match: B8C2L4_THAPS (LETM1 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2L4_THAPS) HSP 1 Score: 58.5 bits (140), Expect = 7.260e-9 Identity = 22/42 (52.38%), Postives = 31/42 (73.81%), Query Frame = 1
Query: 1 LFVREDGTVDWDGAIQSGRDVARFGQELWDRINGESAATAGE 126
L+VREDGT+DWDGA+Q + +FG +W RING+ T+G+
Sbjct: 301 LYVREDGTIDWDGALQDREALKKFGSAVWSRINGQDPETSGD 342
BLAST of mRNA_P-wetherbeei_contig21014.1.1 vs. uniprot
Match: A0A4D9D1V1_9STRA (LETM1 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1V1_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 1.660e-7 Identity = 21/36 (58.33%), Postives = 31/36 (86.11%), Query Frame = 1
Query: 1 LFVREDGTVDWDGAIQSGRDVARFGQELWDRINGES 108
+FVREDGTVDWDGA QSG+++A++ E+ +R+ G+S
Sbjct: 379 VFVREDGTVDWDGAFQSGKELAKYSGEVLERLQGKS 414
BLAST of mRNA_P-wetherbeei_contig21014.1.1 vs. uniprot
Match: W7U438_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U438_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 1.660e-7 Identity = 21/36 (58.33%), Postives = 31/36 (86.11%), Query Frame = 1
Query: 1 LFVREDGTVDWDGAIQSGRDVARFGQELWDRINGES 108
+FVREDGTVDWDGA QSG+++A++ E+ +R+ G+S
Sbjct: 315 VFVREDGTVDWDGAFQSGKELAKYSGEVLERLQGKS 350
BLAST of mRNA_P-wetherbeei_contig21014.1.1 vs. uniprot
Match: A0A7S0CIX0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CIX0_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 1.670e-7 Identity = 22/39 (56.41%), Postives = 27/39 (69.23%), Query Frame = 1
Query: 1 LFVREDGTVDWDGAIQSGRDVARFGQELWDRINGESAAT 117
L+VR+DGTVDWDGA+Q + FG +W RING A T
Sbjct: 69 LYVRDDGTVDWDGALQDRAAIRTFGTAVWSRINGRDAET 107
BLAST of mRNA_P-wetherbeei_contig21014.1.1 vs. uniprot
Match: K0RSL1_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RSL1_THAOC) HSP 1 Score: 53.9 bits (128), Expect = 3.110e-7 Identity = 20/42 (47.62%), Postives = 28/42 (66.67%), Query Frame = 1
Query: 1 LFVREDGTVDWDGAIQSGRDVARFGQELWDRINGESAATAGE 126
L+VR+DGT+DWDGA+Q + +FG +W RING G+
Sbjct: 277 LYVRDDGTIDWDGALQDREALKKFGSAVWSRINGRDPEEGGD 318 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21014.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21014.1.1 >prot_P-wetherbeei_contig21014.1.1 ID=prot_P-wetherbeei_contig21014.1.1|Name=mRNA_P-wetherbeei_contig21014.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=42bp LFVREDGTVDWDGAIQSGRDVARFGQELWDRINGESAATAGEback to top mRNA from alignment at P-wetherbeei_contig21014:348..473- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21014.1.1 ID=mRNA_P-wetherbeei_contig21014.1.1|Name=mRNA_P-wetherbeei_contig21014.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=126bp|location=Sequence derived from alignment at P-wetherbeei_contig21014:348..473- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21014:348..473- >mRNA_P-wetherbeei_contig21014.1.1 ID=mRNA_P-wetherbeei_contig21014.1.1|Name=mRNA_P-wetherbeei_contig21014.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=126bp|location=Sequence derived from alignment at P-wetherbeei_contig21014:348..473- (Phaeothamnion wetherbeei SAG_119_79)back to top |