mRNA_P-wetherbeei_contig20995.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20995.1.1 vs. uniprot
Match: A0A6H5KX83_9PHAE (Lipase_3 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX83_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 2.140e-19 Identity = 80/231 (34.63%), Postives = 111/231 (48.05%), Query Frame = 1
Query: 97 DCEG-GSTYRMYLWASVVACLASAASEAGVAVTSFSSTIMYLGPRAGA-RRFLVLKSAAFALQVALAVVGVFL---------CGGIRAVCGSTPPLLLTAALLATISQVLDCAGVGCCLLTLSAGRPYVDVGDDGDARSGVGGSPRRAAV-EVEAEIEDKCRSVCNFIGRCTCYLFSSPGANAEADFQHVARVIAKIFYTEEALDVVPSDVAAGIVLLHHVQKNREYALRE 753
DC G +Y S+VA + S E +A + TI+ GPR R L K+A Q+ LA+ G FL C G S+ L+ T +L +ISQ LD G+ CC L + + + DD D GV +PR + E+E + E CRS + C C G EADF HV+RV ++ +DVV +DVAAG++LL HVQK +Y R+
Sbjct: 51 DCHDVGYVVFVYEALSIVAGVLSLVVECQIAKAATYGTIIDPGPRNKLLERHLSRKTALGVTQLVLALFGTFLIFYVPFAYACRG-----DSSIALVTTGVVLTSISQYLDSGGMYCCFLAFTT-SDSIWIHDDDDEDGGV--APRHGLLSEMEKKYESFCRSAMKVLAWCACAFNVFGGGEQEADFAHVSRVFGRMLSARRYVDVVATDVAAGLILLRHVQKAEDYKRRD 273
BLAST of mRNA_P-wetherbeei_contig20995.1.1 vs. uniprot
Match: A0A836CK70_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK70_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 2.210e-17 Identity = 83/226 (36.73%), Postives = 111/226 (49.12%), Query Frame = 1
Query: 127 YLWASVVACLASAASEAGVAVTSFSSTIMYLGPRAGARRFLVLKSAAFALQVALAVVGVFLCG---GIRAVC---------GSTPPLLLTAALLAT-ISQVLDCAGVGCCLLTLSAGRPYVDVG---DDGDARSGVGGSPRRAAVEVEAEIEDKCRSVCNFIGRCTCYLFSSPGANA-EADFQHVARVIAKIFYTEEALDVVPSDVAAGIVLLHHVQKNREYALRE 753
Y S+ LA+ A E + TS I R G R L +A Q+ALA +G+ L G + V G+ L+ LL +SQV+D +GCC L G D G + A R A+ +VEA ++CR C + +C +F GAN+ EADF H+ARV+A+IF+TEE LD+VPSDVAAG+VLL RE LRE
Sbjct: 65 YFALSIACFLAAIALEWAILATSLRGAIAEADKRRGMGRLLGAHAALGGFQLALAALGLALFATFEGAQCVAAAEAEGGEAGAVDAALVRVLLLVVCLSQVIDAVVMGCCCW-LVVGPRTEDAGLLAEGAGAMIAAATYERLASDDVEALWAERCRGACEVMSCLSCRVFG--GANSLEADFAHLARVMARIFHTEEYLDIVPSDVAAGVVLLR--ASLRELLLRE 285
BLAST of mRNA_P-wetherbeei_contig20995.1.1 vs. uniprot
Match: A0A4D9CQJ2_9STRA (Lipase_3 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQJ2_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 2.760e-13 Identity = 81/276 (29.35%), Postives = 129/276 (46.74%), Query Frame = 1
Query: 37 RLAVAAVIITFTVTSESEIEDCEGGSTYRMYLWASVVACLASAASEAGVAVTSFSSTIMYLGPRAGARRFLVLKSAAFALQVALAVVGVFLCGGIRAVCGSTPPLL-----LTAALLATISQVLDCAGVGCCLLTLSAGRPYVDVGDDGDARSGVGGSPRRAAVEVEAEIEDKCRSVCNFIGRC----TCYLFSS------PGANAEADFQHVARVIAKIFYTEEALDVVPSDVAAGIVLLHHVQKNREYA--------LREDFESILHEEGLAGG 795
RL +AV++ + + ++ C ++ S+ LA+ E + S +I++ R + L + +Q+ +A+VG+ + +A+ L L AL+ ISQ+ D + CC TL G P VG++ A V + ++ + ED+ R C+F+ C TC+LFSS P D + VARV+A IF++E LDV+PSD+ AG VLL HVQK +E+ L E E +L E+ GG
Sbjct: 29 RLVWSAVVLGLFLHLQYLLQSCSRPGIVDTFVGLSITLFLATVLVELAIVAVSQRGSIVHTQARKAVGPLVALHTCLGGVQLVVALVGLVILSNPKALVMCDTISLQNRVDLIVALI-VISQLADVSMKACCCATL-VGEP---VGEE--AEQAVHHFEQHESLASYSAAEDRWRGRCSFLCTCLRYTTCHLFSSAAGASGPEGGDIGDMEVVARVMADIFHSEGFLDVLPSDILAGFVLLRHVQKAQEHEMVSRRGTELLEAEERVLREQLEEGG 297
BLAST of mRNA_P-wetherbeei_contig20995.1.1 vs. uniprot
Match: A0A6H5L7C8_9PHAE (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7C8_9PHAE) HSP 1 Score: 72.8 bits (177), Expect = 1.110e-10 Identity = 53/151 (35.10%), Postives = 81/151 (53.64%), Query Frame = 1
Query: 271 ALQVALAVVGVFLCGGIRAVCGST--PPLLLTAALLATISQVLDCAGVGCCLLTLSAGRPYVDVGDDGDARSGVGGSPRRAAVEVEAEIEDKCRSVCNFIGRCTCYLFSSPGANAEADFQHVARVIAKIFYTEEALDVVPSDVAAGIVLLH 717
A+Q+ +A +G+ L + + C L L+ TISQ++D V C L +G P G + G R E+E + E +CR + + TC LF G + DF+ +++++A+IF+TEE LDVVPSD+AAGIVLL+
Sbjct: 25 AVQLLMAGLGIGLMTYLDSTCDGVLADGALSVLILVVTISQIVDVL-VTCXXXXLMSGDPVEANGGGSE-----GYYERFPPTEIEGQWESRCRWLHQVLVVLTCGLFGGRGTR-QTDFEQLSKIMARIFHTEEYLDVVPSDIAAGIVLLY 168
BLAST of mRNA_P-wetherbeei_contig20995.1.1 vs. uniprot
Match: D8LSY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSY9_ECTSI) HSP 1 Score: 71.2 bits (173), Expect = 2.150e-10 Identity = 66/226 (29.20%), Postives = 104/226 (46.02%), Query Frame = 1
Query: 46 VAAVIITFTVTSESEIEDCEGGSTYRMYLWASVVACLASAASEAGVAVTSFSSTIMYLGPRAGARRFLVLKSAAFALQVALAVVGVFLCGGIRAVCGST--PPLLLTAALLATISQVLDCAGVGCCLLTLSAGRPYVDVGDDGDARSGVGGSPRRAAVEVEAEIEDKCRSVCNFIGRCTCYLFSSPGANAEADFQHVARVIAKIFYTEEALDVVPSDVAAGIVLLH 717
+A V++ F V + + C G Y+ S+ S E G+ S +I R +L + A+Q+ +A +G+ L + + C L L+ TISQ++D V C G P G + G R E+E + E +C + + TC LF G + DF+ +++++A+IF+TEE LDVVPSD+AAGIVLL+
Sbjct: 34 IALVVVLFQVGGD--LRGCNDGWVVYTYMVCSLSTFALSVVVEWGITRVSTRGSIPDTRLRDHLSGYLNVHMMLGAVQLVMAGLGIGLMTYLDSTCEGVLADGALNVLILVVTISQIVDVL-VTCXXXXXXXGDPEEAYGGGSE-----GHYERFPPTEIEGQWESRCHWLHRVLVVLTCGLFGGRGIR-QTDFEQLSKIMARIFHTEEYLDVVPSDIAAGIVLLY 250
BLAST of mRNA_P-wetherbeei_contig20995.1.1 vs. uniprot
Match: D7FYR7_ECTSI (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYR7_ECTSI) HSP 1 Score: 66.6 bits (161), Expect = 1.210e-8 Identity = 32/79 (40.51%), Postives = 46/79 (58.23%), Query Frame = 1
Query: 517 VEAEIEDKCRSVCNFIGRCTCYLFSSPGANAEADFQHVARVIAKIFYTEEALDVVPSDVAAGIVLLHHVQKNREYALRE 753
+E + E+ CRS + C+C G EADF HV+RV ++ +DVV +DVAAG++LL HVQK +Y R+
Sbjct: 1 MEKKYENFCRSAVKVLAWCSCAFNVFGGGEQEADFAHVSRVFGRMLSARRYVDVVATDVAAGLILLRHVQKAEDYKRRD 79
BLAST of mRNA_P-wetherbeei_contig20995.1.1 vs. uniprot
Match: A0A7S2V3Y5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3Y5_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 2.070e-8 Identity = 36/84 (42.86%), Postives = 46/84 (54.76%), Query Frame = 1
Query: 502 RAAVEVEAEIEDKCRSVCNFIGRCTCYLFSSPGANAEADFQHVARVIAKIFYTEEALDVVPSDVAAGIVLLHHVQKNREYALRE 753
R VEAE +C +C TC LF G E D VARV+A++F + LD+V SDVAAGI LL H+Q+ +Y E
Sbjct: 237 RPMTMVEAEWRSRCDRMCRLAQCATCSLFGGMGGT-EDDISMVARVMARVFSAQGHLDIVASDVAAGIALLRHLQRFSQYGALE 319
BLAST of mRNA_P-wetherbeei_contig20995.1.1 vs. uniprot
Match: A0A7S4DDL5_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDL5_HETAK) HSP 1 Score: 62.4 bits (150), Expect = 1.950e-7 Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 538 KCRSVCNFIGRCTCYLFSSPGANAEADFQHVARVIAKIFYTEEALDVVPSDVAAGIVLLHHVQKNRE 738
+C+ +C+F TC +F G + DF VARV+A +F TE LD+V SD+ AG+VLL HVQ+ R+
Sbjct: 2 RCQKMCSFATCVTCKIFGRAGE--QNDFSQVARVMATVFNTEGHLDLVASDLLAGLVLLRHVQRRRD 66
BLAST of mRNA_P-wetherbeei_contig20995.1.1 vs. uniprot
Match: B5Y5S9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y5S9_PHATC) HSP 1 Score: 62.8 bits (151), Expect = 2.280e-7 Identity = 29/80 (36.25%), Postives = 44/80 (55.00%), Query Frame = 1
Query: 517 VEAEIEDKCRSVCNFIGRCTCYLFSSPGANAEADFQHVARVIAKIFYTEEALDVVPSDVAAGIVLLHHVQKNREYALRED 756
+E D+C + C +G +C++F +A+F VAR +A T LDVVPSD+ G +LL +Q+ R Y RE+
Sbjct: 239 IEEMWADRCAAACQCLGSASCFMFGGRELLGQAEFGDVARALADYLDTGGILDVVPSDIVTGFMLLQRIQRQRIYRAREE 318
BLAST of mRNA_P-wetherbeei_contig20995.1.1 vs. uniprot
Match: A0A7S4J3B9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J3B9_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 7.870e-7 Identity = 32/81 (39.51%), Postives = 46/81 (56.79%), Query Frame = 1
Query: 517 VEAEIEDKCRSVCNFIGRCTCYLFSSPGANAEADFQ-HVARVIAKIFYTEEALDVVPSDVAAGIVLLHHVQKNREYALRED 756
VE +D+C S C + TC+LF ++ +DF +VA V+A F + LDVVPSD+ AG+V+L VQ R R +
Sbjct: 106 VEQMWQDRCESACRCMAASTCFLFGGRELSSGSDFYGNVAEVLADYFEDGDNLDVVPSDIVAGLVMLGKVQGERVARARNE 186 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20995.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20995.1.1 >prot_P-wetherbeei_contig20995.1.1 ID=prot_P-wetherbeei_contig20995.1.1|Name=mRNA_P-wetherbeei_contig20995.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=282bp MALAALTRLAVAAVIITFTVTSESEIEDCEGGSTYRMYLWASVVACLASAback to top mRNA from alignment at P-wetherbeei_contig20995:76..1150+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20995.1.1 ID=mRNA_P-wetherbeei_contig20995.1.1|Name=mRNA_P-wetherbeei_contig20995.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1075bp|location=Sequence derived from alignment at P-wetherbeei_contig20995:76..1150+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20995:76..1150+ >mRNA_P-wetherbeei_contig20995.1.1 ID=mRNA_P-wetherbeei_contig20995.1.1|Name=mRNA_P-wetherbeei_contig20995.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=846bp|location=Sequence derived from alignment at P-wetherbeei_contig20995:76..1150+ (Phaeothamnion wetherbeei SAG_119_79)back to top |