mRNA_P-wetherbeei_contig20989.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20989.1.1
Unique NamemRNA_P-wetherbeei_contig20989.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig20989.1.1 vs. uniprot
Match: A0A418DI24_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418DI24_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 3.410e-8
Identity = 24/46 (52.17%), Postives = 34/46 (73.91%), Query Frame = 1 
Query:    4 QVFYGLLSDCVPILGYRRKPYLIMGWF-THIIWQVRCRQSSLPPVV 138
            +VFYG+LSDC PI+GY RKPY+++GW  T I + V   + ++P VV
Sbjct:  105 KVFYGMLSDCFPIMGYSRKPYILIGWLMTAICFVVIALKPAVPSVV 150
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BLAST of mRNA_P-wetherbeei_contig20989.1.1 vs. uniprot
Match: A0A8K1CA03_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CA03_PYTOL)

HSP 1 Score: 57.0 bits (136), Expect = 3.460e-8
Identity = 21/31 (67.74%), Postives = 27/31 (87.10%), Query Frame = 1 
Query:    4 QVFYGLLSDCVPILGYRRKPYLIMGWFTHII 96
            +VFYG+LSDCVPI GYRR+PY+++GW   II
Sbjct:  105 KVFYGILSDCVPICGYRRRPYMVLGWTIAII 135
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BLAST of mRNA_P-wetherbeei_contig20989.1.1 vs. uniprot
Match: A0A397BQ16_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BQ16_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 5.180e-8
Identity = 24/46 (52.17%), Postives = 34/46 (73.91%), Query Frame = 1 
Query:    4 QVFYGLLSDCVPILGYRRKPYLIMGWF-THIIWQVRCRQSSLPPVV 138
            +VFYG+LSDC PI+GY RKPY+++GW  T I + V   + ++P VV
Sbjct:  105 KVFYGMLSDCFPIMGYSRKPYILIGWLMTAICFVVISLKPAVPSVV 150
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BLAST of mRNA_P-wetherbeei_contig20989.1.1 vs. uniprot
Match: A0A8K1CVZ3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CVZ3_PYTOL)

HSP 1 Score: 56.6 bits (135), Expect = 5.190e-8
Identity = 20/31 (64.52%), Postives = 27/31 (87.10%), Query Frame = 1 
Query:    4 QVFYGLLSDCVPILGYRRKPYLIMGWFTHII 96
            +VFYG+LSDCVPI GYRR+PY+++GW   I+
Sbjct:   74 KVFYGILSDCVPIRGYRRRPYMVLGWMICIV 104
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BLAST of mRNA_P-wetherbeei_contig20989.1.1 vs. uniprot
Match: A0A1V9YW54_9STRA (Transmembrane protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YW54_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 5.200e-8
Identity = 20/31 (64.52%), Postives = 27/31 (87.10%), Query Frame = 1 
Query:    4 QVFYGLLSDCVPILGYRRKPYLIMGWFTHII 96
            ++FYG+LSDCVPI+G+RRKPY+I+GW    I
Sbjct:  110 KIFYGMLSDCVPIMGFRRKPYMIIGWIATAI 140
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BLAST of mRNA_P-wetherbeei_contig20989.1.1 vs. uniprot
Match: A0A3F2RTB1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RTB1_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 6.070e-8
Identity = 21/45 (46.67%), Postives = 34/45 (75.56%), Query Frame = 1 
Query:    4 QVFYGLLSDCVPILGYRRKPYLIMGW---FTHIIWQVRCRQSSLP 129
            ++FYG+++DCVP+ GYRR+P+++MGW   FT ++  + C  S LP
Sbjct:  109 KIFYGVITDCVPVFGYRRRPFMLMGWTLCFTMLL-VMACMDSGLP 152
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BLAST of mRNA_P-wetherbeei_contig20989.1.1 vs. uniprot
Match: T0QIF9_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QIF9_SAPDV)

HSP 1 Score: 55.1 bits (131), Expect = 6.150e-8
Identity = 18/26 (69.23%), Postives = 25/26 (96.15%), Query Frame = 1 
Query:    4 QVFYGLLSDCVPILGYRRKPYLIMGW 81
            +VFYG+LSDCVP+ GYRRKP++++GW
Sbjct:  109 KVFYGMLSDCVPVFGYRRKPWMVLGW 134
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BLAST of mRNA_P-wetherbeei_contig20989.1.1 vs. uniprot
Match: A0A8J4WGA1_9STRA (Uncharacterized protein (Fragment) n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A8J4WGA1_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 7.100e-8
Identity = 21/45 (46.67%), Postives = 34/45 (75.56%), Query Frame = 1 
Query:    4 QVFYGLLSDCVPILGYRRKPYLIMGW---FTHIIWQVRCRQSSLP 129
            ++FYG+++DCVP+ GYRR+P+++MGW   FT ++  + C  S LP
Sbjct:  109 KIFYGVITDCVPVFGYRRRPFMLMGWTLCFTMLL-VMACMDSGLP 152
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BLAST of mRNA_P-wetherbeei_contig20989.1.1 vs. uniprot
Match: K3W649_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W649_GLOUD)

HSP 1 Score: 56.2 bits (134), Expect = 7.110e-8
Identity = 19/26 (73.08%), Postives = 25/26 (96.15%), Query Frame = 1 
Query:    4 QVFYGLLSDCVPILGYRRKPYLIMGW 81
            +VFYG+LSDCVPI GYRR+PY+++GW
Sbjct:  109 KVFYGILSDCVPIFGYRRRPYMVLGW 134
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BLAST of mRNA_P-wetherbeei_contig20989.1.1 vs. uniprot
Match: A0A1V9YUV5_9STRA (Transmembrane protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YUV5_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 7.110e-8
Identity = 18/26 (69.23%), Postives = 26/26 (100.00%), Query Frame = 1 
Query:    4 QVFYGLLSDCVPILGYRRKPYLIMGW 81
            ++FYG+LSDC+P++GYRRKPY+I+GW
Sbjct:  109 KIFYGMLSDCLPVMGYRRKPYMIIGW 134
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20989.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A418DI24_9STRA3.410e-852.17Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A8K1CA03_PYTOL3.460e-867.74Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A397BQ16_9STRA5.180e-852.17Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A8K1CVZ3_PYTOL5.190e-864.52Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1V9YW54_9STRA5.200e-864.52Transmembrane protein n=1 Tax=Achlya hypogyna TaxI... [more]
A0A3F2RTB1_9STRA6.070e-846.67Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
T0QIF9_SAPDV6.150e-869.23Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A8J4WGA1_9STRA7.100e-846.67Uncharacterized protein (Fragment) n=3 Tax=Phytoph... [more]
K3W649_GLOUD7.110e-873.08Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A1V9YUV5_9STRA7.110e-869.23Transmembrane protein n=1 Tax=Achlya hypogyna TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20989contigP-wetherbeei_contig20989:81..233 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog65071.PYU1_T000440
PFAMsBT1
Model size153
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue1.16e-08
EggNOG OGs29N8G@1|root,2RVJ4@2759|Eukaryota,1MAN2@121069|Pythiales
DescriptionFolate-Biopterin Transporter (FBT) family. Source PGD
Cds size153
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186213.293579-CDS-P-wetherbeei_contig20989:80..2331683186213.293579-CDS-P-wetherbeei_contig20989:80..233Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20989 81..233 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20989.1.1prot_P-wetherbeei_contig20989.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20989 81..233 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20989.1.1

>prot_P-wetherbeei_contig20989.1.1 ID=prot_P-wetherbeei_contig20989.1.1|Name=mRNA_P-wetherbeei_contig20989.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=51bp
LQVFYGLLSDCVPILGYRRKPYLIMGWFTHIIWQVRCRQSSLPPVVKSFL
*
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mRNA from alignment at P-wetherbeei_contig20989:81..233-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20989.1.1 ID=mRNA_P-wetherbeei_contig20989.1.1|Name=mRNA_P-wetherbeei_contig20989.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=153bp|location=Sequence derived from alignment at P-wetherbeei_contig20989:81..233- (Phaeothamnion wetherbeei SAG_119_79)
CTGCAGGTCTTCTACGGCCTCCTGTCGGACTGCGTGCCGATCCTCGGCTA
CAGGCGCAAGCCGTACCTCATCATGGGGTGGTTCACGCACATCATCTGGC
AAGTGCGCTGTCGACAGAGTTCTCTGCCCCCGGTGGTAAAGTCGTTCTTA
TGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20989:81..233-

>mRNA_P-wetherbeei_contig20989.1.1 ID=mRNA_P-wetherbeei_contig20989.1.1|Name=mRNA_P-wetherbeei_contig20989.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=153bp|location=Sequence derived from alignment at P-wetherbeei_contig20989:81..233- (Phaeothamnion wetherbeei SAG_119_79)
CTGCAGGTCTTCTACGGCCTCCTGTCGGACTGCGTGCCGATCCTCGGCTA
CAGGCGCAAGCCGTACCTCATCATGGGGTGGTTCACGCACATCATCTGGC
AAGTGCGCTGTCGACAGAGTTCTCTGCCCCCGGTGGTAAAGTCGTTCTTA
TGA
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