mRNA_P-wetherbeei_contig20883.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20883.1.1
Unique NamemRNA_P-wetherbeei_contig20883.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20883.1.1 vs. uniprot
Match: A0A6I3F5H9_9ACTN (ATP-binding cassette domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A6I3F5H9_9ACTN)

HSP 1 Score: 414 bits (1065), Expect = 1.050e-144
Identity = 204/261 (78.16%), Postives = 229/261 (87.74%), Query Frame = 1
Query:    1 MTAVLKLTDVSFVRDDRTILAPLSWTVEPGQRWLVLGANGSGKTTLLRIASLYEHPSSGRVRVLGEELGRTDVRVLRRRIGYLSAAFSAQLRPELRCLDVVMTAKYAAMEPWWHRYDSTDEAQALSCLTRMGVERFAERSLGTVSSGEQQRVLLARTLMNAPGVVMLDEPSARLDLGGREQLVAALAELTHDPAAPPLVLVTHHLDEVPGGMTHVMMLRDGEVLARGPIARTLTAEALSECFRMPLQLQRRPDGRLSAWAT 783
            M + L L +VSFVRD+R ILAPL W V+P +RWLVLGANGSGKTTLLRIASLYEHPSSG V VLGE LGRTDVR LRRR+GYLSAA +AQ+RPELRCLDVVMTA+YAA+EPWWHRY + DEA+A+ CL RMGV   A RSLGTVSSGEQQRVLLARTLMN PGV++LDEPSARLDLGGREQLV ALAELT DPAAPPLVLVTHHLDEVP GMTH +MLRDG+V+ARGP++  L +++LSECF +PL L+RRPDGR SAWAT
Sbjct:    1 MASTLHLKNVSFVRDERVILAPLEWRVQPSERWLVLGANGSGKTTLLRIASLYEHPSSGTVDVLGERLGRTDVRQLRRRVGYLSAALAAQIRPELRCLDVVMTARYAALEPWWHRYTTADEARAIECLERMGVAWTATRSLGTVSSGEQQRVLLARTLMNEPGVLLLDEPSARLDLGGREQLVQALAELTLDPAAPPLVLVTHHLDEVPPGMTHTLMLRDGKVVARGPLSTALNSDSLSECFGLPLHLERRPDGRFSAWAT 261          
BLAST of mRNA_P-wetherbeei_contig20883.1.1 vs. uniprot
Match: A0A3C2B8U9_9ACTN (Iron ABC transporter ATP-binding protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B8U9_9ACTN)

HSP 1 Score: 400 bits (1028), Expect = 4.530e-139
Identity = 199/259 (76.83%), Postives = 224/259 (86.49%), Query Frame = 1
Query:    1 MTAVLKLTDVSFVRDDRTILAPLSWTVEPGQRWLVLGANGSGKTTLLRIASLYEHPSSGRVRVLGEELGRTDVRVLRRRIGYLSAAFSAQLRPELRCLDVVMTAKYAAMEPWWHRYDSTDEAQALSCLTRMGVERFAERSLGTVSSGEQQRVLLARTLMNAPGVVMLDEPSARLDLGGREQLVAALAELTHDPAAPPLVLVTHHLDEVPGGMTHVMMLRDGEVLARGPIARTLTAEALSECFRMPLQLQRRPDGRLSAW 777
            M  VL++ +VSFVRD+R ILAP++W V+  +RWLVLGANGSGKTTLLRIAS+YEHPSSG V VLGE LGRTDVR LRRR+GYLSAA +A +RP LRCLDVVMTAKYAA+EPWWHRY + DE QAL  L RMGV   AERSLGT+SSGEQQRVLLARTLMN PGVV+LDEPSARLDLGGREQLV ALAELT DP APP+VLVTHHLDEVP G+THV+MLRDG+V+A+GPI R L + +LSECF MPL L+RRPDGR SAW
Sbjct:    1 MNTVLRVANVSFVRDERCILAPITWAVQAHERWLVLGANGSGKTTLLRIASMYEHPSSGTVDVLGERLGRTDVRELRRRVGYLSAALAADIRPALRCLDVVMTAKYAALEPWWHRYTTADETQALQRLERMGVAWAAERSLGTLSSGEQQRVLLARTLMNEPGVVLLDEPSARLDLGGREQLVQALAELTLDPTAPPVVLVTHHLDEVPPGITHVLMLRDGQVVAKGPIDRYLNSASLSECFGMPLHLERRPDGRYSAW 259          
BLAST of mRNA_P-wetherbeei_contig20883.1.1 vs. uniprot
Match: A0A7X9KHU3_9ACTN (ATP-binding cassette domain-containing protein n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9KHU3_9ACTN)

HSP 1 Score: 395 bits (1014), Expect = 8.430e-137
Identity = 200/259 (77.22%), Postives = 220/259 (84.94%), Query Frame = 1
Query:    1 MTAVLKLTDVSFVRDDRTILAPLSWTVEPGQRWLVLGANGSGKTTLLRIASLYEHPSSGRVRVLGEELGRTDVRVLRRRIGYLSAAFSAQLRPELRCLDVVMTAKYAAMEPWWHRYDSTDEAQALSCLTRMGVERFAERSLGTVSSGEQQRVLLARTLMNAPGVVMLDEPSARLDLGGREQLVAALAELTHDPAAPPLVLVTHHLDEVPGGMTHVMMLRDGEVLARGPIARTLTAEALSECFRMPLQLQRRPDGRLSAW 777
            M   L+L+DVSFVR+ RTILA LSW V   +RWLVLGANGSGKTTLLRIASLYEHPS+G V VLGE LGRTDVR LR+RIGYLSA+ SAQLRPELRCLDVVMTAKYAA+EPWWHRY   DE +A  CL RMGV   AERSLGTVSSGEQQRVLLARTLMN PG+V+LDEPSARLDLGGRE LV AL+ELT DP APPLVLVTHHLDEVP G+THVMMLRDG V+A+G +   LT++ LS CF +PLQL+RRPDGR SAW
Sbjct:    1 MGPALQLSDVSFVRESRTILASLSWQVGDAERWLVLGANGSGKTTLLRIASLYEHPSTGTVDVLGERLGRTDVRRLRQRIGYLSASLSAQLRPELRCLDVVMTAKYAALEPWWHRYTLADEQRAKECLDRMGVAWAAERSLGTVSSGEQQRVLLARTLMNEPGIVLLDEPSARLDLGGREHLVQALSELTLDPLAPPLVLVTHHLDEVPPGITHVMMLRDGAVIAKGALDDCLTSDLLSRCFGLPLQLERRPDGRFSAW 259          
BLAST of mRNA_P-wetherbeei_contig20883.1.1 vs. uniprot
Match: A0A7K1BAL6_9ACTN (ATP-binding cassette domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A7K1BAL6_9ACTN)

HSP 1 Score: 394 bits (1013), Expect = 2.260e-136
Identity = 199/257 (77.43%), Postives = 220/257 (85.60%), Query Frame = 1
Query:   10 VLKLTDVSFVRDDRTILAPLSWTVEPGQRWLVLGANGSGKTTLLRIASLYEHPSSGRVRVLGEELGRTDVRVLRRRIGYLSAAFSAQLRPELRCLDVVMTAKYAAMEPWWHRYDSTDEAQALSCLTRMGVERFAERSLGTVSSGEQQRVLLARTLMNAPGVVMLDEPSARLDLGGREQLVAALAELTHDPAAPPLVLVTHHLDEVPGGMTHVMMLRDGEVLARGPIARTLTAEALSECFRMPLQLQRRPDGRLSAWA 780
            VL   DVSFVRD+R ILAPL W V   +RWLVLGANGSGKTTL+RIA++YEHPSSG V VLGE LGRTDVR LRRRIGY SAA SAQ+RPELRC DVVMTAK+AA+EPWWHRYD  D  +A++CL RM V  FA+R+L T+SSGEQQRVLLARTLMN PG+++LDEPSARLDLGGREQLV ALAELT DP A PLVLVTHHLDEVP GMTHV+MLR GEV+ARGPIA TL AEALSECF MPL+L+RR DGR SAWA
Sbjct:   26 VLVCRDVSFVRDERVILAPLRWRVRSDERWLVLGANGSGKTTLVRIAAMYEHPSSGDVTVLGERLGRTDVRSLRRRIGYSSAAMSAQIRPELRCSDVVMTAKHAALEPWWHRYDDADRERAVACLDRMRVGGFADRALATLSSGEQQRVLLARTLMNEPGLLLLDEPSARLDLGGREQLVGALAELTTDPDAAPLVLVTHHLDEVPDGMTHVLMLRRGEVVARGPIATTLDAEALSECFEMPLRLERRGDGRWSAWA 282          
BLAST of mRNA_P-wetherbeei_contig20883.1.1 vs. uniprot
Match: A0A539DW05_9ACTN (Putative ABC transporter ATP-binding protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539DW05_9ACTN)

HSP 1 Score: 366 bits (939), Expect = 1.200e-125
Identity = 178/243 (73.25%), Postives = 209/243 (86.01%), Query Frame = 1
Query:   55 ILAPLSWTVEPGQRWLVLGANGSGKTTLLRIASLYEHPSSGRVRVLGEELGRTDVRVLRRRIGYLSAAFSAQLRPELRCLDVVMTAKYAAMEPWWHRYDSTDEAQALSCLTRMGVERFAERSLGTVSSGEQQRVLLARTLMNAPGVVMLDEPSARLDLGGREQLVAALAELTHDPAAPPLVLVTHHLDEVPGGMTHVMMLRDGEVLARGPIARTLTAEALSECFRMPLQLQRRPDGRLSAWAT 783
            ILAPLSW VE  +RWLVLGANGSGKT+L+++ ++YEHPS+G VRVLGEELG TDVR LRRRIGY SAA  AQLRP L C+DVVMTAK+AA+EPWWH YD  D  +A  CL RMGV RF +R++G++SSGEQQRV+LARTLMN PGV++LDEPSARLDLGGREQL+AALAELT DP+A P+VLVTHHLDEVP G THV+MLRDG V+ARGPI   LT+ +LS+CF + L+LQRRPDGRL+AWAT
Sbjct:    2 ILAPLSWRVERDERWLVLGANGSGKTSLVKLCAMYEHPSTGVVRVLGEELGSTDVRALRRRIGYSSAAMFAQLRPGLACIDVVMTAKHAALEPWWHHYDDADRIRAGQCLERMGVRRFGDRAIGSLSSGEQQRVMLARTLMNDPGVLLLDEPSARLDLGGREQLIAALAELTLDPSAVPIVLVTHHLDEVPPGCTHVLMLRDGIVVARGPIDAALTSRSLSDCFDVELELQRRPDGRLAAWAT 244          
BLAST of mRNA_P-wetherbeei_contig20883.1.1 vs. uniprot
Match: A0A6I3AAU8_9ACTN (ATP-binding cassette domain-containing protein n=6 Tax=root TaxID=1 RepID=A0A6I3AAU8_9ACTN)

HSP 1 Score: 362 bits (929), Expect = 8.350e-124
Identity = 178/256 (69.53%), Postives = 207/256 (80.86%), Query Frame = 1
Query:   13 LKLTDVSFVRDDRTILAPLSWTVEPGQRWLVLGANGSGKTTLLRIASLYEHPSSGRVRVLGEELGRTDVRVLRRRIGYLSAAFSAQLRPELRCLDVVMTAKYAAMEPWWHRYDSTDEAQALSCLTRMGVERFAERSLGTVSSGEQQRVLLARTLMNAPGVVMLDEPSARLDLGGREQLVAALAELTHDPAAPPLVLVTHHLDEVPGGMTHVMMLRDGEVLARGPIARTLTAEALSECFRMPLQLQRRPDGRLSAWA 780
            L+L  VSFVRD R ILAPL WTV P +RWLVLGANGSGKTTL+RIASLYEHPS+G + VLGE LGRTDVR LRRRIG  SAA S Q R +LR +D+VMTA+YAA+EPWWH Y   D   A +CL RMGVE +AER + T+SSGEQQRV LAR+LMN PG+V+LDEPSAR DLGGREQL  AL+EL  DP +PPL+LVTHH+DEVP GMTH ++LR G V++ GPIA+ LTAE LSECF + L L+RR DGRL+AWA
Sbjct:   11 LRLRKVSFVRDGREILAPLDWTVRPDERWLVLGANGSGKTTLVRIASLYEHPSTGTLEVLGETLGRTDVRQLRRRIGLASAALSQQFRTDLRAIDIVMTARYAALEPWWHEYTDDDREHARACLARMGVEAYAERPIYTLSSGEQQRVFLARSLMNDPGLVLLDEPSARRDLGGREQLGGALSELVDDPTSPPLILVTHHVDEVPNGMTHALLLRSGRVVSVGPIAQALTAETLSECFGLDLVLERRGDGRLTAWA 266          
BLAST of mRNA_P-wetherbeei_contig20883.1.1 vs. uniprot
Match: A0A6I3WKZ1_9ACTN (ATP-binding cassette domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A6I3WKZ1_9ACTN)

HSP 1 Score: 354 bits (909), Expect = 1.490e-120
Identity = 174/259 (67.18%), Postives = 210/259 (81.08%), Query Frame = 1
Query:    4 TAVLKLTDVSFVRDDRTILAPLSWTVEPGQRWLVLGANGSGKTTLLRIASLYEHPSSGRVRVLGEELGRTDVRVLRRRIGYLSAAFSAQLRPELRCLDVVMTAKYAAMEPWWHRYDSTDEAQALSCLTRMGVERFAERSLGTVSSGEQQRVLLARTLMNAPGVVMLDEPSARLDLGGREQLVAALAELTHDPAAPPLVLVTHHLDEVPGGMTHVMMLRDGEVLARGPIARTLTAEALSECFRMPLQLQRRPDGRLSAWA 780
            T  L+   V FVR+DR IL  ++W+V   QRWL+LGANGSGKTT++R+AS+YEHPSSG V  LGE LG TDVR LRRRIG +SAA  AQLRP+L   D V+TAK+AA+E WWH Y   D  +A +CL R+ V ++AER++GT+SSGEQQRVLLAR LMN PG+++LDEPSARLDLGGREQLVAALAELT DPAAPPL+LVTHH+DEVP GMTHV++LR+G+VL  G I   LTAEALS+CF MPL L+RR DGRL+AW+
Sbjct:   27 TEALRFGRVCFVREDRRILDDINWSVRSDQRWLILGANGSGKTTMVRMASMYEHPSSGSVTALGETLGSTDVRQLRRRIGVMSAAVGAQLRPQLSAQDTVVTAKFAALETWWHTYTEADYERARACLARLNVAQYAERTMGTLSSGEQQRVLLARALMNEPGLLVLDEPSARLDLGGREQLVAALAELTTDPAAPPLILVTHHVDEVPPGMTHVLLLREGKVLVAGEIDDVLTAEALSDCFAMPLTLERRSDGRLTAWS 285          
BLAST of mRNA_P-wetherbeei_contig20883.1.1 vs. uniprot
Match: A0A4V3EJ39_9ACTN (Iron complex transport system ATP-binding protein n=1 Tax=Ilumatobacter fluminis TaxID=467091 RepID=A0A4V3EJ39_9ACTN)

HSP 1 Score: 350 bits (897), Expect = 3.910e-119
Identity = 169/261 (64.75%), Postives = 208/261 (79.69%), Query Frame = 1
Query:    1 MTAVLKLTDVSFVRDDRTILAPLSWTVEPGQRWLVLGANGSGKTTLLRIASLYEHPSSGRVRVLGEELGRTDVRVLRRRIGYLSAAFSAQLRPELRCLDVVMTAKYAAMEPWWHRYDSTDEAQALSCLTRMGVERFAERSLGTVSSGEQQRVLLARTLMNAPGVVMLDEPSARLDLGGREQLVAALAELTHDPAAPPLVLVTHHLDEVPGGMTHVMMLRDGEVLARGPIARTLTAEALSECFRMPLQLQRRPDGRLSAWAT 783
            MT  L+L  +   RD R I+  +S+ V P Q WLVLGANGSGKTTLLR+AS+YEHP++G VRVLGE+LGRTDVR LRRR+GY SAA +AQ R EL  +++VMTA+YAA+EPWWHRYD  D A+AL CL +M VERFA+R LG++SSGEQQRV LARTLM  PGV++LDEPSARLDLGGRE+LV AL +L  +P APP VLVTHH+DEVP G++H ++LRDG  +  GPI   LTAE+LS CF MP+ L+RR DGR +AW++
Sbjct:    1 MTLPLELDHIVVRRDGRNIVDDVSFVVSPDQNWLVLGANGSGKTTLLRVASMYEHPTTGTVRVLGEQLGRTDVRQLRRRVGYASAALAAQFRAELTAVEIVMTARYAALEPWWHRYDDADRARALDCLGQMDVERFADRPLGSLSSGEQQRVFLARTLMTDPGVILLDEPSARLDLGGRERLVHALDDLASNPDAPPFVLVTHHVDEVPAGVSHALLLRDGRAIESGPIDEALTAESLSACFDMPINLERRGDGRFTAWSS 261          
BLAST of mRNA_P-wetherbeei_contig20883.1.1 vs. uniprot
Match: A0A6N2DRF2_9ACTN (ATP-binding cassette domain-containing protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DRF2_9ACTN)

HSP 1 Score: 350 bits (897), Expect = 4.820e-119
Identity = 176/255 (69.02%), Postives = 201/255 (78.82%), Query Frame = 1
Query:   13 LKLTDVSFVRDDRTILAPLSWTVEPGQRWLVLGANGSGKTTLLRIASLYEHPSSGRVRVLGEELGRTDVRVLRRRIGYLSAAFSAQLRPELRCLDVVMTAKYAAMEPWWHRYDSTDEAQALSCLTRMGVERFAERSLGTVSSGEQQRVLLARTLMNAPGVVMLDEPSARLDLGGREQLVAALAELTHDPAAPPLVLVTHHLDEVPGGMTHVMMLRDGEVLARGPIARTLTAEALSECFRMPLQLQRRPDGRLSAW 777
            L + DVSF RD R IL  ++  VE GQRWLVLGANGSGKTTLLRIA+LYEHPSSG V VLGE LG TDVRVLRRRIGY SAA  AQ R EL  +D+V TA+YAA+EPWWH+YD  D  +A++CL  MGV+  A R+LGT+SSGEQQRV LARTLMN P VV+LDEPSARLDLGGREQLV AL  +  DP APP VLVTHH+DEVP G+TH  +LRDG +L  G I   LT+E LSECF +PL+L RRPDGRL+AW
Sbjct:   11 LVVDDVSFRRDGRAILDRVTIRVESGQRWLVLGANGSGKTTLLRIAALYEHPSSGSVSVLGERLGVTDVRVLRRRIGYASAALGAQFRTELTAVDIVKTARYAALEPWWHQYDRDDHDRAVACLGSMGVDALAHRTLGTLSSGEQQRVFLARTLMNDPAVVLLDEPSARLDLGGREQLVVALQHMAADPTAPPFVLVTHHVDEVPPGVTHAALLRDGRILQSGVIDDVLTSEGLSECFGLPLELDRRPDGRLTAW 265          
BLAST of mRNA_P-wetherbeei_contig20883.1.1 vs. uniprot
Match: A0A349AXP2_9ACTN (Iron ABC transporter ATP-binding protein n=3 Tax=root TaxID=1 RepID=A0A349AXP2_9ACTN)

HSP 1 Score: 343 bits (879), Expect = 2.060e-116
Identity = 172/260 (66.15%), Postives = 205/260 (78.85%), Query Frame = 1
Query:    1 MTAVLKLTDVSFVRDDRTILAPLSWTVEPGQRWLVLGANGSGKTTLLRIASLYEHPSSGRVRVLGEELGRTDVRVLRRRIGYLSAAFSAQLRPELRCLDVVMTAKYAAMEPWWHRYDSTDEAQALSCLTRMGVERFAERSLGTVSSGEQQRVLLARTLMNAPGVVMLDEPSARLDLGGREQLVAALAELTHDPAAPPLVLVTHHLDEVPGGMTHVMMLRDGEVLARGPIARTLTAEALSECFRMPLQLQRRPDGRLSAWA 780
            M A L+L  +SFVRD RTIL  +S TVE  QRWLVLGANGSGKTTL+RIA++YEHP+ G V VLG+ LG TDVR LR+RIGY+SA+F+++LRP L  LDVVMTAK AA+E WWH+YD  D  QA  CL RM +   A R+ GT+SSGEQQRVLLAR+LMN P +V++DEPSARLDLGGREQLV AL+ELT D  A PLVLVTHH+DE+P GMTHV+ L+DG+ + RG I  + TAE LSECF M L LQ+R +GR SAWA
Sbjct:    1 MVAALELNKISFVRDGRTILDSVSLTVEADQRWLVLGANGSGKTTLVRIAAMYEHPTYGSVSVLGQTLGTTDVRTLRQRIGYVSASFASELRPALIALDVVMTAKNAALETWWHQYDEADAQQAQRCLDRMRIGHLAHRTFGTLSSGEQQRVLLARSLMNNPNIVLMDEPSARLDLGGREQLVEALSELTLDANAAPLVLVTHHVDEIPPGMTHVLFLKDGKAMTRGTITESFTAENLSECFSMSLHLQQRDNGRYSAWA 260          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20883.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I3F5H9_9ACTN1.050e-14478.16ATP-binding cassette domain-containing protein n=2... [more]
A0A3C2B8U9_9ACTN4.530e-13976.83Iron ABC transporter ATP-binding protein n=1 Tax=A... [more]
A0A7X9KHU3_9ACTN8.430e-13777.22ATP-binding cassette domain-containing protein n=2... [more]
A0A7K1BAL6_9ACTN2.260e-13677.43ATP-binding cassette domain-containing protein n=2... [more]
A0A539DW05_9ACTN1.200e-12573.25Putative ABC transporter ATP-binding protein (Frag... [more]
A0A6I3AAU8_9ACTN8.350e-12469.53ATP-binding cassette domain-containing protein n=6... [more]
A0A6I3WKZ1_9ACTN1.490e-12067.18ATP-binding cassette domain-containing protein n=2... [more]
A0A4V3EJ39_9ACTN3.910e-11964.75Iron complex transport system ATP-binding protein ... [more]
A0A6N2DRF2_9ACTN4.820e-11969.02ATP-binding cassette domain-containing protein n=1... [more]
A0A349AXP2_9ACTN2.060e-11666.15Iron ABC transporter ATP-binding protein n=3 Tax=r... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20883contigP-wetherbeei_contig20883:77..859 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1313172.YM304_22530
PFAMsABC_tran
Model size783
Max annot lvl84992|Acidimicrobiia
KEGG koko:K02013
KEGG TC3.A.1.14
KEGG Pathwayko02010,map02010
KEGG ModuleM00240
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.51e-108
EggNOG OGsCOG1119@1|root,COG1119@2|Bacteria,2GIXX@201174|Actinobacteria,4CN5B@84992|Acidimicrobiia
EC3.6.3.34
DescriptionATPases associated with a variety of cellular activities
Cds size783
COG categoryP
BRITEko00000,ko00001,ko00002,ko01000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186211.2319436-CDS-P-wetherbeei_contig20883:76..8591683186211.2319436-CDS-P-wetherbeei_contig20883:76..859Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20883 77..859 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20883.1.1prot_P-wetherbeei_contig20883.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20883 77..859 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20883.1.1

>prot_P-wetherbeei_contig20883.1.1 ID=prot_P-wetherbeei_contig20883.1.1|Name=mRNA_P-wetherbeei_contig20883.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=261bp
MTAVLKLTDVSFVRDDRTILAPLSWTVEPGQRWLVLGANGSGKTTLLRIA
SLYEHPSSGRVRVLGEELGRTDVRVLRRRIGYLSAAFSAQLRPELRCLDV
VMTAKYAAMEPWWHRYDSTDEAQALSCLTRMGVERFAERSLGTVSSGEQQ
RVLLARTLMNAPGVVMLDEPSARLDLGGREQLVAALAELTHDPAAPPLVL
VTHHLDEVPGGMTHVMMLRDGEVLARGPIARTLTAEALSECFRMPLQLQR
RPDGRLSAWAT
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mRNA from alignment at P-wetherbeei_contig20883:77..859+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20883.1.1 ID=mRNA_P-wetherbeei_contig20883.1.1|Name=mRNA_P-wetherbeei_contig20883.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig20883:77..859+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACGGCCGTTCTGAAGCTCACCGACGTCAGCTTCGTCCGCGACGACCG GACGATCCTGGCTCCGCTGAGCTGGACGGTGGAGCCGGGACAGCGCTGGT TGGTGCTCGGCGCCAACGGATCGGGCAAGACGACGCTCCTGCGCATCGCC TCGCTGTACGAGCATCCGAGCAGCGGCAGGGTGCGTGTGCTGGGCGAAGA GCTCGGCCGGACCGACGTCCGCGTGCTGCGACGGCGGATCGGGTACCTCT CGGCCGCGTTCTCCGCGCAACTGCGACCCGAGCTGCGCTGCCTCGACGTG GTGATGACCGCCAAGTACGCGGCCATGGAGCCCTGGTGGCACCGCTACGA CTCGACCGATGAGGCGCAGGCCCTGTCGTGCCTCACCCGCATGGGTGTCG AACGGTTCGCCGAACGGTCCCTCGGCACCGTCTCGTCCGGCGAGCAGCAG CGCGTCCTGCTGGCGCGCACCCTGATGAACGCGCCCGGCGTGGTGATGCT CGACGAGCCGAGCGCGCGACTCGATCTGGGTGGCCGCGAGCAGTTGGTCG CCGCGTTGGCGGAGCTGACCCATGACCCCGCCGCTCCCCCGCTGGTGCTC GTCACCCACCACCTCGACGAAGTGCCTGGCGGGATGACGCACGTGATGAT GCTGCGTGACGGCGAGGTGCTGGCCCGTGGCCCCATCGCGCGCACGTTGA CCGCCGAGGCGCTCAGCGAGTGCTTCCGGATGCCGTTGCAGTTGCAACGA CGTCCCGATGGACGGCTCAGCGCGTGGGCGACA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20883:77..859+

>mRNA_P-wetherbeei_contig20883.1.1 ID=mRNA_P-wetherbeei_contig20883.1.1|Name=mRNA_P-wetherbeei_contig20883.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig20883:77..859+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACGGCCGTTCTGAAGCTCACCGACGTCAGCTTCGTCCGCGACGACCG
GACGATCCTGGCTCCGCTGAGCTGGACGGTGGAGCCGGGACAGCGCTGGT
TGGTGCTCGGCGCCAACGGATCGGGCAAGACGACGCTCCTGCGCATCGCC
TCGCTGTACGAGCATCCGAGCAGCGGCAGGGTGCGTGTGCTGGGCGAAGA
GCTCGGCCGGACCGACGTCCGCGTGCTGCGACGGCGGATCGGGTACCTCT
CGGCCGCGTTCTCCGCGCAACTGCGACCCGAGCTGCGCTGCCTCGACGTG
GTGATGACCGCCAAGTACGCGGCCATGGAGCCCTGGTGGCACCGCTACGA
CTCGACCGATGAGGCGCAGGCCCTGTCGTGCCTCACCCGCATGGGTGTCG
AACGGTTCGCCGAACGGTCCCTCGGCACCGTCTCGTCCGGCGAGCAGCAG
CGCGTCCTGCTGGCGCGCACCCTGATGAACGCGCCCGGCGTGGTGATGCT
CGACGAGCCGAGCGCGCGACTCGATCTGGGTGGCCGCGAGCAGTTGGTCG
CCGCGTTGGCGGAGCTGACCCATGACCCCGCCGCTCCCCCGCTGGTGCTC
GTCACCCACCACCTCGACGAAGTGCCTGGCGGGATGACGCACGTGATGAT
GCTGCGTGACGGCGAGGTGCTGGCCCGTGGCCCCATCGCGCGCACGTTGA
CCGCCGAGGCGCTCAGCGAGTGCTTCCGGATGCCGTTGCAGTTGCAACGA
CGTCCCGATGGACGGCTCAGCGCGTGGGCGACA
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