mRNA_P-wetherbeei_contig20853.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20853.1.1 vs. uniprot
Match: A0A2D4VLG6_9HYPH (Acyl-CoA dehydrogenase n=2 Tax=Parvibaculum TaxID=256616 RepID=A0A2D4VLG6_9HYPH) HSP 1 Score: 228 bits (580), Expect = 6.220e-71 Identity = 118/181 (65.19%), Postives = 145/181 (80.11%), Query Frame = 1
Query: 1 MEFALSDQQKMMQDSVDSALAKACPLDRVRQAADSGDAHADDVWRMLADLGIAGVLIPEQHGGLGLGLLEAALISEMLGKHVAPVPFLASAVMAPLALMMAGSVTQQRRWLPKLASGDARASVAIAEYASGARENAGITAGGGKLSGKALFAIDAAGADFLIVADRDRRLHLVEADAKGLA 543
MEF LS+ Q+M+QDS++ L + CPL+RVR+AA+ G+A ADDVW L +LG+ G+++PE GGLGL LL+AAL+SEMLG+HVAPVPF+A+AVMAP ALM AGS+ QQ WLPKLASG+ ASVAIAE SGARE+AG+TA GGKL+GKA FA+D A IVAD D LHLV+ DAKGLA
Sbjct: 1 MEFGLSEDQRMLQDSLNGTLERVCPLERVRKAAEGGEAMADDVWTALTELGVPGMIVPEAQGGLGLALLDAALVSEMLGRHVAPVPFIATAVMAPAALMRAGSMAQQEEWLPKLASGEVVASVAIAEKVSGAREDAGVTASGGKLNGKAWFAMDFGEAGLFIVADMDGGLHLVKGDAKGLA 181
BLAST of mRNA_P-wetherbeei_contig20853.1.1 vs. uniprot
Match: A0A2N3EGI2_9PROT (Acyl-CoA dehydrogenase n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-11 TaxID=2013657 RepID=A0A2N3EGI2_9PROT) HSP 1 Score: 220 bits (560), Expect = 6.610e-68 Identity = 116/185 (62.70%), Postives = 145/185 (78.38%), Query Frame = 1
Query: 1 MEFALSDQQKMMQDSVDSALAKACPLDRVRQAADSGDAHADDVWRMLADLGIAGVLIPEQHGGLGLGLLEAALISEMLGKHVAPVPFLASAVMAPLALMMAGSVTQQRRWLPKLASGDARASVAIAEYASGARENAGITAGGGKLSGKALFAIDAAGADFLIVADRDRRLHLVEADAKGLAMRAL 555
MEF LS+ QK++Q+S+ L K PL+RVR+AAD A+A DVW+ L++LG+AG+LI E+HGG+G+GLL+AAL SEMLG+HVAP PF+A+AVMAP+AL AGS QQ WLPKLASG+A VA++E A+GARE AG+ A GGKL+G ALFA+DAAGAD IVAD+ LHLV DAKGL AL
Sbjct: 1 MEFGLSEDQKLLQESIGRTLEKVSPLERVRKAADEHAAYAGDVWQALSELGVAGMLIAEEHGGMGMGLLDAALASEMLGRHVAPAPFVATAVMAPIALAGAGSKAQQAAWLPKLASGEAITGVAVSERAAGAREGAGVAASGGKLNGTALFALDAAGADIFIVADKTGGLHLVTGDAKGLTRIAL 185
BLAST of mRNA_P-wetherbeei_contig20853.1.1 vs. uniprot
Match: A7HUA6_PARL1 (Acyl-CoA dehydrogenase domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) TaxID=402881 RepID=A7HUA6_PARL1) HSP 1 Score: 216 bits (550), Expect = 2.120e-66 Identity = 113/185 (61.08%), Postives = 145/185 (78.38%), Query Frame = 1
Query: 1 MEFALSDQQKMMQDSVDSALAKACPLDRVRQAADSGDAHADDVWRMLADLGIAGVLIPEQHGGLGLGLLEAALISEMLGKHVAPVPFLASAVMAPLALMMAGSVTQQRRWLPKLASGDARASVAIAEYASGARENAGITAGGGKLSGKALFAIDAAGADFLIVADRDRRLHLVEADAKGLAMRAL 555
MEF LS+ QK++Q+SV L K LDRVR+AA++ + +A DVW L +LG+ G+++PE GG+G+ LL+AAL++EMLG+H+APVPF+A+AVMAP+AL AGS TQQ WLPKLA G+A A VA+AE A+GAR+ AG+TA GGKLSG ALFA+DA GAD LIVAD+ LHLV+ DAKGL AL
Sbjct: 1 MEFGLSEDQKLLQESVGRTLEKVSSLDRVRKAAETREDYARDVWTALVELGVPGMMVPEDFGGMGMKLLDAALVAEMLGRHIAPVPFVATAVMAPIALTGAGSATQQEAWLPKLAGGEAIAGVAVAERAAGARDGAGVTAAGGKLSGSALFAMDATGADILIVADKAGGLHLVKGDAKGLTKVAL 185
BLAST of mRNA_P-wetherbeei_contig20853.1.1 vs. uniprot
Match: A0A3B8XQZ4_9HYPH (Acyl-CoA dehydrogenase n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A3B8XQZ4_9HYPH) HSP 1 Score: 216 bits (549), Expect = 3.080e-66 Identity = 110/180 (61.11%), Postives = 144/180 (80.00%), Query Frame = 1
Query: 1 MEFALSDQQKMMQDSVDSALAKACPLDRVRQAADSGDAHADDVWRMLADLGIAGVLIPEQHGGLGLGLLEAALISEMLGKHVAPVPFLASAVMAPLALMMAGSVTQQRRWLPKLASGDARASVAIAEYASGARENAGITAGGGKLSGKALFAIDAAGADFLIVADRDRRLHLVEADAKGL 540
MEF LS+ QK++Q+SV L K PL+RVR AA+ G+ A D+ + LADLG+ G+++PE+HGG+G+ LL+AAL++EMLG+HVAP F+A+AVMAPLA+ AGS QQ +WLPKLASG+A+A VAIAE ASGARE AG+TA GGKL+GK+LFA++A AD ++VAD+ LHLV DAKGL
Sbjct: 1 MEFGLSEDQKLLQESVRGTLEKVSPLERVRAAAEKGETEAADIAQALADLGVFGMMVPERHGGMGMALLDAALVAEMLGRHVAPAGFIATAVMAPLAIAGAGSEAQQEKWLPKLASGEAKAGVAIAEAASGAREGAGVTASGGKLNGKSLFALEAENADIIVVADKAGALHLVSGDAKGL 180
BLAST of mRNA_P-wetherbeei_contig20853.1.1 vs. uniprot
Match: A0A2D8RYH7_9HYPH (Acyl-CoA dehydrogenase n=1 Tax=Parvibaculum sp. TaxID=2024848 RepID=A0A2D8RYH7_9HYPH) HSP 1 Score: 214 bits (545), Expect = 1.230e-65 Identity = 112/180 (62.22%), Postives = 143/180 (79.44%), Query Frame = 1
Query: 1 MEFALSDQQKMMQDSVDSALAKACPLDRVRQAADSGDAHADDVWRMLADLGIAGVLIPEQHGGLGLGLLEAALISEMLGKHVAPVPFLASAVMAPLALMMAGSVTQQRRWLPKLASGDARASVAIAEYASGARENAGITAGGGKLSGKALFAIDAAGADFLIVADRDRRLHLVEADAKGL 540
MEF LS+ QK++Q+S+ L K PL+RVR+AAD G+ A D+ + LA LG+ G+++PE HGGLGLGLL+AAL++EMLG+HVAP F+A+AVMAP+AL AGS QQ WLPKLASG+A+A AIAE ASGARE AG+TA GGKL+GK+LFA++A AD +IVAD+ LHLV+ DAKGL
Sbjct: 1 MEFGLSEDQKLLQESIGGTLDKISPLERVREAADKGETQAADIAQALAGLGVYGMMVPEAHGGLGLGLLDAALVAEMLGRHVAPAGFIATAVMAPIALAGAGSKAQQEAWLPKLASGEAKAGAAIAEAASGAREGAGVTATGGKLNGKSLFALEAEEADIIIVADKAGGLHLVKGDAKGL 180
BLAST of mRNA_P-wetherbeei_contig20853.1.1 vs. uniprot
Match: A0A328BHB1_9CAUL (Acyl-CoA dehydrogenase n=1 Tax=Phenylobacterium kunshanense TaxID=1445034 RepID=A0A328BHB1_9CAUL) HSP 1 Score: 211 bits (537), Expect = 1.540e-64 Identity = 113/182 (62.09%), Postives = 141/182 (77.47%), Query Frame = 1
Query: 1 MEFALSDQQKMMQDSVDSALAKACPLDRVRQAADSGDAHADDVWRMLADLGIAGVLIPEQHGGLGLGLLEAALISEMLGKHVAPVPFLASAVMAPLALMMAGSVTQQRRWLPKLASGDARASVAIAEYASGARENAGITAGGGKLSGKALFAIDAAGADFLIVADRDRRLHLVEADAKGLAM 546
M FALSD Q M+QDS++ ALA PL+RVR+ AD G+ A D+W+ LADLG+ G+L+PE+HGGLGLG+LEAAL +E LG+HVAP PFL++AV+APLAL AGS Q+R WLPKLA+G A AI+E +GAR+ AG+TAGGG+LSGKALFA+D AGAD L+VADR LHL A+ AM
Sbjct: 1 MRFALSDDQVMLQDSLNRALADLAPLERVRRFADGGEQTAPDIWKGLADLGLPGLLVPEEHGGLGLGMLEAALAAEALGRHVAPTPFLSTAVLAPLALA-AGSDAQRREWLPKLAAGAVLAGAAISEPIAGARDGAGVTAGGGRLSGKALFALDVAGADLLVVADRGGALHLARGAAETAAM 181
BLAST of mRNA_P-wetherbeei_contig20853.1.1 vs. uniprot
Match: A0A6N6VN10_9HYPH (Acyl-CoA dehydrogenase n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VN10_9HYPH) HSP 1 Score: 208 bits (530), Expect = 2.160e-63 Identity = 110/181 (60.77%), Postives = 141/181 (77.90%), Query Frame = 1
Query: 1 MEFALSDQQKMMQDSVDSALAKACPLDRVRQAADSGDAHADDVWRMLADLGIAGVLIPEQHGGLGLGLLEAALISEMLGKHVAPVPFLASAVMAPLALMMAGSVTQQRRWLPKLASGDARASVAIAEYASGARENAGITAGGGKLSGKALFAIDAAGADFLIVADRDRRLHLVEADAKGLA 543
MEF LS+ Q++MQ+SV+ L K PLDRVR+AA++ + +A D+W L DLG+ G+++PE GG+GL LL+AAL+SE LG++VAP PF+A+AVMAPLAL+ + S QQ +LPKLA G+A VAI+E ASGAR+ AGITA GGKL+GKALF +D GADF IV DRD LHLV ADA+GLA
Sbjct: 1 MEFGLSEDQRLMQESVNRTLEKVSPLDRVRKAAEAREPYARDIWAALVDLGVPGLIVPENEGGMGLKLLDAALVSEALGRYVAPAPFIATAVMAPLALIGSASPRQQEAFLPKLAGGEAVVGVAISERASGARDGAGITASGGKLTGKALFVLDCGGADFYIVGDRDCGLHLVWADAEGLA 181
BLAST of mRNA_P-wetherbeei_contig20853.1.1 vs. uniprot
Match: A0A2N3E1A8_9PROT (Acyl-CoA dehydrogenase n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-12 TaxID=2013658 RepID=A0A2N3E1A8_9PROT) HSP 1 Score: 208 bits (530), Expect = 2.160e-63 Identity = 109/182 (59.89%), Postives = 140/182 (76.92%), Query Frame = 1
Query: 1 MEFALSDQQKMMQDSVDSALAKACPLDRVRQAADSGDAHADDVWRMLADLGIAGVLIPEQHGGLGLGLLEAALISEMLGKHVAPVPFLASAVMAPLALMMAGSVTQQRRWLPKLASGDARASVAIAEYASGARENAGITAGGGKLSGKALFAIDAAGADFLIVADRDRRLHLVEADAKGLAM 546
MEF LS+ QK++ S+ L K PL+RVR+AA++ + +A D+W LADLG+ G+L+PE+ GG+GLGLL+AAL +EMLG+HV PVPF+A+AVMAP+A+ GS QQ WLPKLA G+A A VA+AE ASGARE AG+ A GGKL+G ALFA+DAA AD +IVAD+ LHLV A+A GL M
Sbjct: 1 MEFGLSEDQKLLSASIGGTLEKTAPLERVRKAAETRENYARDIWDALADLGVTGMLVPEEFGGMGLGLLDAALAAEMLGRHVVPVPFIATAVMAPIAISGTGSKAQQAAWLPKLARGEAIAGVAVAERASGAREGAGVGAAGGKLTGTALFALDAAAADVIIVADKAGGLHLVTANAPGLTM 182
BLAST of mRNA_P-wetherbeei_contig20853.1.1 vs. uniprot
Match: A0A8I1RQC8_9PROT (Acyl-CoA/acyl-ACP dehydrogenase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A8I1RQC8_9PROT) HSP 1 Score: 200 bits (508), Expect = 4.370e-60 Identity = 115/185 (62.16%), Postives = 140/185 (75.68%), Query Frame = 1
Query: 1 MEFALSDQQKMMQDSVDSALAKACPLDRVRQAADSGDAHADDVWRMLADLGIAGVLIPEQHGGLGLGLLEAALISEMLGKHVAPVPFLASAVMAPLALMMAGSVTQQRRWLPKLASGDARASVAIAEYASGARENAGITAGGGKLSGKALFAIDAAGADFLIVADRDRRLHLVEADAKGLAMRAL 555
MEF LS QKMMQDSV L +A PL RVR+AA++ +A A DV + LADLG+ G+LIPE GG GL LL+AAL+SE LG+H APVPF+A++VMAPLAL+ AGS QQ+R LPKLA+G+ A VAIAE SG R+ AG+TA GGKL+GKALF +D A AD +VADR LHLVEA+A GL +L
Sbjct: 1 MEFGLSQDQKMMQDSVHRTLERAAPLARVREAAEA-NAIARDVHKALADLGVTGLLIPESFGGAGLKLLDAALVSETLGRHAAPVPFIAASVMAPLALIHAGSPEQQQRVLPKLAAGETIAGVAIAESVSGTRDGAGLTASGGKLNGKALFVMDFADADLFVVADRACGLHLVEANAPGLTKTSL 184
BLAST of mRNA_P-wetherbeei_contig20853.1.1 vs. uniprot
Match: A0A522D7S6_9CAUL (Acyl-CoA dehydrogenase n=1 Tax=Phenylobacterium sp. TaxID=1871053 RepID=A0A522D7S6_9CAUL) HSP 1 Score: 198 bits (504), Expect = 1.440e-59 Identity = 109/181 (60.22%), Postives = 136/181 (75.14%), Query Frame = 1
Query: 1 MEFALSDQQKMMQDSVDSALAKACPLDRVRQAADSGDAHADDVWRMLADLGIAGVLIPEQHGGLGLGLLEAALISEMLGKHVAPVPFLASAVMAPLALMMAGSVTQQRRWLPKLASGDARASVAIAEYASGARENAGITAGGGKLSGKALFAIDAAGADFLIVADRDRRLHLV-EADAKGL 540
M FALS+ Q ++QDS+ ALA LDRVR+ AD G+A A D+W L++LG+ G+L+PE+HGGLGLGLLEAAL +E LG+ VAP PFL SAV+APLAL + GS Q+R WLPKLA G A A AI+E +GAR+ AG+TA GGKL+GKALFA+DA AD L+VADR LHL +ADA +
Sbjct: 1 MRFALSEDQTLLQDSLTKALADLSSLDRVRRFADGGEATAPDIWAGLSELGLPGLLVPEEHGGLGLGLLEAALAAEALGRVVAPTPFLGSAVLAPLALRLGGSDEQKRAWLPKLADGGATAGAAISEPIAGARDGAGVTAEGGKLTGKALFALDAMAADLLVVADRSGVLHLAAKADASEI 181 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20853.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20853.1.1 >prot_P-wetherbeei_contig20853.1.1 ID=prot_P-wetherbeei_contig20853.1.1|Name=mRNA_P-wetherbeei_contig20853.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=185bp MEFALSDQQKMMQDSVDSALAKACPLDRVRQAADSGDAHADDVWRMLADLback to top mRNA from alignment at P-wetherbeei_contig20853:6..560- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20853.1.1 ID=mRNA_P-wetherbeei_contig20853.1.1|Name=mRNA_P-wetherbeei_contig20853.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=555bp|location=Sequence derived from alignment at P-wetherbeei_contig20853:6..560- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20853:6..560- >mRNA_P-wetherbeei_contig20853.1.1 ID=mRNA_P-wetherbeei_contig20853.1.1|Name=mRNA_P-wetherbeei_contig20853.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=555bp|location=Sequence derived from alignment at P-wetherbeei_contig20853:6..560- (Phaeothamnion wetherbeei SAG_119_79)back to top |